Lcy05g012000 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g012000
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	rRNA N-glycosidase
Location	Chr05: 13763435 .. 13763971 (-)
RNA-Seq Expression	Lcy05g012000
Synteny	Lcy05g012000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATAGCTGTCCTCCCTTATAAACCTATGGTCAACCTCTTATCTAGCCAATGTGGGATTTTGGTCCCATTCCCAACAATTATTTCCTTCACCCCACAAGGTGCTTCAAGCGATGCTTATGGAGACTTCATAAAACAAGTCCGTCAACATCTCACGTTCAACACCAAACAAGTCTATGACATTCCTGTTTTGAACCAAGCCGCACACCTTCGATGGCGCTTCTCCTTCATTCACCTTTCCAACTCCTCCGATCGCATCATTGTTGCCTTCGATTTGTCGACCGCTTCCATTGTCGGCTATCGCTCAATTTTAAAATCCTACTTCTTCCAAGAAGCTCCTCAAGAAGCCTCTACGGTCCTTTTCGTTGGTACCATTAGCAACACACTGCCGTACACGGCCAATTTCAGCGACCTTGAAAAGGCTGCAGGCACTACAAGGGCTAATATTCCCCTTGGACCTTCCCCCTTCGGCGACACCATGCGAACTACGACGAGCGTTCCGCTCCTCGGTCGCTACTTGTCATCATTCAAATGA

mRNA sequence

ATGGAGATAGCTGTCCTCCCTTATAAACCTATGGTCAACCTCTTATCTAGCCAATGTGGGATTTTGGTCCCATTCCCAACAATTATTTCCTTCACCCCACAAGGTGCTTCAAGCGATGCTTATGGAGACTTCATAAAACAAGTCCGTCAACATCTCACGTTCAACACCAAACAAGTCTATGACATTCCTGTTTTGAACCAAGCCGCACACCTTCGATGGCGCTTCTCCTTCATTCACCTTTCCAACTCCTCCGATCGCATCATTGTTGCCTTCGATTTGTCGACCGCTTCCATTGTCGGCTATCGCTCAATTTTAAAATCCTACTTCTTCCAAGAAGCTCCTCAAGAAGCCTCTACGGTCCTTTTCGTTGGTACCATTAGCAACACACTGCCGTACACGGCCAATTTCAGCGACCTTGAAAAGGCTGCAGGCACTACAAGGGCTAATATTCCCCTTGGACCTTCCCCCTTCGGCGACACCATGCGAACTACGACGAGCGTTCCGCTCCTCGGTCGCTACTTGTCATCATTCAAATGA

Coding sequence (CDS)

ATGGAGATAGCTGTCCTCCCTTATAAACCTATGGTCAACCTCTTATCTAGCCAATGTGGGATTTTGGTCCCATTCCCAACAATTATTTCCTTCACCCCACAAGGTGCTTCAAGCGATGCTTATGGAGACTTCATAAAACAAGTCCGTCAACATCTCACGTTCAACACCAAACAAGTCTATGACATTCCTGTTTTGAACCAAGCCGCACACCTTCGATGGCGCTTCTCCTTCATTCACCTTTCCAACTCCTCCGATCGCATCATTGTTGCCTTCGATTTGTCGACCGCTTCCATTGTCGGCTATCGCTCAATTTTAAAATCCTACTTCTTCCAAGAAGCTCCTCAAGAAGCCTCTACGGTCCTTTTCGTTGGTACCATTAGCAACACACTGCCGTACACGGCCAATTTCAGCGACCTTGAAAAGGCTGCAGGCACTACAAGGGCTAATATTCCCCTTGGACCTTCCCCCTTCGGCGACACCATGCGAACTACGACGAGCGTTCCGCTCCTCGGTCGCTACTTGTCATCATTCAAATGA

Protein sequence

MEIAVLPYKPMVNLLSSQCGILVPFPTIISFTPQGASSDAYGDFIKQVRQHLTFNTKQVYDIPVLNQAAHLRWRFSFIHLSNSSDRIIVAFDLSTASIVGYRSILKSYFFQEAPQEASTVLFVGTISNTLPYTANFSDLEKAAGTTRANIPLGPSPFGDTMRTTTSVPLLGRYLSSFK

Homology

[Close]

BLAST of Lcy05g012000 vs. ExPASy Swiss-Prot
Match: P09989 (Ribosome-inactivating protein alpha-trichosanthin OS=Trichosanthes kirilowii OX=3677 PE=1 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-17
Identity = 55/128 (42.97%), Postives = 79/128 (61.72%), Query Frame = 0


Query: 29  ISFTPQGASSDAYGDFIKQVRQHLTFNTKQVYDIPVLNQAAHLRWRFSFIHLSNSSDRII 88
           +SF   GA+S +YG FI  +R+ L  N +++YDIP+L  +     R++ IHL+N +D  I
Sbjct: 25  VSFRLSGATSSSYGVFISNLRKALP-NERKLYDIPLLRSSLPGSQRYALIHLTNYADETI 84

Query: 89  -VAFDLSTASIVGYRSILKSYFFQEA-PQEASTVLFVGTISN-TLPYTANFSDLEKAAGT 148
            VA D++   I+GYR+   SYFF EA   EA+  +F   +   TLPY+ N+  L+ AAG 
Sbjct: 85  SVAIDVTNVYIMGYRAGDTSYFFNEASATEAAKYVFKDAMRKVTLPYSGNYERLQTAAGK 144

Query: 149 TRANIPLG 154
            R NIPLG
Sbjct: 145 IRENIPLG 151

[Close]

BLAST of Lcy05g012000 vs. ExPASy Swiss-Prot
Match: P33183 (Nigrin b OS=Sambucus nigra OX=4202 PE=1 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 4.6e-17
Identity = 55/157 (35.03%), Postives = 89/157 (56.69%), Query Frame = 0


Query: 4   AVLPYKPMVNLLSSQCGIL-VPFPTIISFTPQGASSDAYGDFIKQVRQHLTFNTKQVYDI 63
           A + Y  +V L     GI  + +P+ +SF   GA S  Y DF+  +R+ +   T +V  +
Sbjct: 6   AAMLYFYIVVLAICSVGIQGIDYPS-VSFNLDGAKSATYRDFLSNLRKTVATGTYEVNGL 65

Query: 64  PVLNQAA--HLRWRFSFIHLSN-SSDRIIVAFDLSTASIVGYRSILKSYFFQEAPQEAST 123
           PVL + +   ++ RF  + L+N + + + +A D++   +V +     SYFF++A +   +
Sbjct: 66  PVLRRESEVQVKSRFVLVPLTNYNGNTVTLAVDVTNLYVVAFSGNANSYFFKDATEVQKS 125

Query: 124 VLFVGTISNTLPYTANFSDLEKAAGTTRANIPLGPSP 157
            LFVGT  NTL +T N+ +LE AA T R +I LGPSP
Sbjct: 126 NLFVGTKQNTLSFTGNYDNLETAANTRRESIELGPSP 161

[Close]

BLAST of Lcy05g012000 vs. ExPASy Swiss-Prot
Match: P24478 (Ribosome-inactivating protein karasurin-C OS=Trichosanthes kirilowii OX=3677 PE=1 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-16
Identity = 54/128 (42.19%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 29  ISFTPQGASSDAYGDFIKQVRQHLTFNTKQVYDIPVLNQAAHLRWRFSFIHLSNSSDRII 88
           +SF   GA+S +YG FI  +R+ L +  K +YDIP+L        R++ IHL+N +D  I
Sbjct: 25  VSFRLSGATSSSYGVFISNLRKALPYERK-LYDIPLLRSTLPGSQRYALIHLTNYADETI 84

Query: 89  -VAFDLSTASIVGYRSILKSYFFQEA-PQEASTVLFVGTISN-TLPYTANFSDLEKAAGT 148
            VA D++   ++GYR+   SYFF EA   EA+  +F       TLPY+ N+  L+ AAG 
Sbjct: 85  SVAIDVTNVYVMGYRAGDTSYFFNEASATEAAKYVFKDAKRKVTLPYSGNYERLQIAAGK 144

Query: 149 TRANIPLG 154
            R NIPLG
Sbjct: 145 IRENIPLG 151

[Close]

BLAST of Lcy05g012000 vs. ExPASy Swiss-Prot
Match: Q06077 (Abrin-b OS=Abrus precatorius OX=3816 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-16
Identity = 53/129 (41.09%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 28  IISFTPQGASSDAYGDFIKQVRQHLTFNTKQVYDIPVLNQAAHL--RWRFSFIHLSNS-S 87
           +I FT +GA+S +Y  FI+ +RQ LT     ++ IPVL     L  R R+  + LSNS +
Sbjct: 4   VIKFTTEGATSQSYKQFIEALRQRLTGGL--IHGIPVLPDPTTLQERNRYISVELSNSDT 63

Query: 88  DRIIVAFDLSTASIVGYRSILKSYFFQEAPQEASTVLFVGTISNTLPYTANFSDLEKAAG 147
           + I    D+S A +V YR+  +SYF ++AP  AS  LF GT   +L +  ++ DLE+ A 
Sbjct: 64  ESIEAGIDVSNAYVVAYRAGNRSYFLRDAPTSASRYLFTGTQQYSLRFNGSYIDLERLAR 123

Query: 148 TTRANIPLG 154
            TR  IPLG
Sbjct: 124 QTRQQIPLG 130

[Close]

BLAST of Lcy05g012000 vs. ExPASy Swiss-Prot
Match: P11140 (Abrin-a OS=Abrus precatorius OX=3816 PE=1 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 2.3e-16
Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = 0


Query: 29  ISFTPQGASSDAYGDFIKQVRQHLTFNTKQVYDIPVLNQAAHL--RWRFSFIHLSNS-SD 88
           I F+ +GA+S +Y  FI+ +R+ L      ++DIPVL     L  R R+  + LSNS ++
Sbjct: 5   IKFSTEGATSQSYKQFIEALRERLRGGL--IHDIPVLPDPTTLQERNRYITVELSNSDTE 64

Query: 89  RIIVAFDLSTASIVGYRSILKSYFFQEAPQEASTVLFVGTISNTLPYTANFSDLEKAAGT 148
            I V  D++ A +V YR+  +SYF ++AP  AS  LF GT  ++LP+   + DLE+ A  
Sbjct: 65  SIEVGIDVTNAYVVAYRAGTQSYFLRDAPSSASDYLFTGTDQHSLPFYGTYGDLERWAHQ 124

Query: 149 TRANIPLG 154
           +R  IPLG
Sbjct: 125 SRQQIPLG 130

[Close]

BLAST of Lcy05g012000 vs. ExPASy TrEMBL
Match: A0A498J952 (rRNA N-glycosidase OS=Malus domestica OX=3750 GN=DVH24_020699 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 5.1e-19
Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = 0


Query: 29  ISFTPQGASSDAYGDFIKQVRQHLTFNTKQVYDIPVLNQAAHLRWRFSFIHLSNS-SDRI 88
           ISF+  GA+S++Y  FIK +R  LT     +YDIPVLN +     RF  + LSN+ ++ I
Sbjct: 24  ISFSTSGATSNSYNTFIKALRAQLTNGATAIYDIPVLNPSVPDSQRFLLVDLSNNGNNTI 83

Query: 89  IVAFDLSTASIVGYRS-ILKSYFFQEAPQEASTVLFVGTISNTLPYTANFSDLEKAAGTT 148
            VA D+  AS+V YR+   + YF  +AP EA  +LF  T    LP+T+N+ DLEKAA  +
Sbjct: 84  TVAIDVVNASVVAYRARAARPYFLADAPDEALDILFNDTRGFFLPFTSNYVDLEKAAEKS 143

Query: 149 RANIPLGPSP 157
           R  IPLG +P
Sbjct: 144 REKIPLGLTP 153

[Close]

BLAST of Lcy05g012000 vs. ExPASy TrEMBL
Match: Q0ZAI5 (rRNA N-glycosidase OS=Malus domestica OX=3750 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 5.1e-19
Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = 0


Query: 29  ISFTPQGASSDAYGDFIKQVRQHLTFNTKQVYDIPVLNQAAHLRWRFSFIHLSNS-SDRI 88
           ISF+  GA+S++Y  FIK +R  LT     +YDIPVLN +     RF  + LSN+ ++ I
Sbjct: 24  ISFSTSGATSNSYNTFIKALRAQLTNGATAIYDIPVLNPSVPDSQRFLLVDLSNNGNNTI 83

Query: 89  IVAFDLSTASIVGYRS-ILKSYFFQEAPQEASTVLFVGTISNTLPYTANFSDLEKAAGTT 148
            VA D+  AS+V YR+   + YF  +AP EA  +LF  T    LP+T+N+ DLEKAA  +
Sbjct: 84  TVAIDVVNASVVAYRARAARPYFLADAPDEALDILFNDTRGFFLPFTSNYLDLEKAAEKS 143

Query: 149 RANIPLGPSP 157
           R  IPLG +P
Sbjct: 144 REKIPLGLTP 153

[Close]

BLAST of Lcy05g012000 vs. ExPASy TrEMBL
Match: A0A540LKG3 (rRNA N-glycosidase OS=Malus baccata OX=106549 GN=C1H46_027481 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 6.7e-19
Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = 0


Query: 29  ISFTPQGASSDAYGDFIKQVRQHLTFNTKQVYDIPVLNQAAHLRWRFSFIHLSNS-SDRI 88
           ISF+  GA+S++Y  FIK +R  LT     +YDIPVLN +     RF  + LSN+ ++ I
Sbjct: 24  ISFSTSGATSNSYNKFIKALRAQLTNGATAIYDIPVLNPSVPDSQRFLLVDLSNNGNNTI 83

Query: 89  IVAFDLSTASIVGYRS-ILKSYFFQEAPQEASTVLFVGTISNTLPYTANFSDLEKAAGTT 148
            VA D+  AS+V YR+   + YF  +AP EA  +LF  T    LP+T+N+ DLEKAA  +
Sbjct: 84  TVAIDVVNASVVAYRARAARPYFLADAPDEALDILFNDTRGFFLPFTSNYVDLEKAAEKS 143

Query: 149 RANIPLGPSP 157
           R  IPLG +P
Sbjct: 144 RDKIPLGLTP 153

[Close]

BLAST of Lcy05g012000 vs. ExPASy TrEMBL
Match: O04367 (rRNA N-glycosidase OS=Sambucus nigra OX=4202 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 6.9e-16
Identity = 58/157 (36.94%), Postives = 92/157 (58.60%), Query Frame = 0


Query: 4   AVLPYKPMVNLLSSQCGIL-VPFPTIISFTPQGASSDAYGDFIKQVRQHLTFNTKQVYDI 63
           A + Y  +V L     GI  + +P+ +SF   GA S  Y DF+K +R  +   T +V  +
Sbjct: 6   AAMLYLYIVVLAICSVGIQGIDYPS-VSFNLAGAKSATYRDFLKNLRTIVATGTYEVNGL 65

Query: 64  PVLNQAA--HLRWRFSFIHLSN-SSDRIIVAFDLSTASIVGYRSILKSYFFQEAPQEAST 123
           PVL + +   ++ RF  + L+N + + + +A D++   +V + +   SYFF++A Q   +
Sbjct: 66  PVLRRESEVQVKNRFVLVLLTNYNGNTVTLAVDVTNLYVVAFSANANSYFFKDATQLQKS 125

Query: 124 VLFVGTISNTLPYTANFSDLEKAAGTTRANIPLGPSP 157
            LFVGT  +TLP+T N+ +LE AAGT R +I LGPSP
Sbjct: 126 NLFVGTRQHTLPFTGNYDNLETAAGTRRESIELGPSP 161

[Close]

BLAST of Lcy05g012000 vs. ExPASy TrEMBL
Match: A0A6J1DVE7 (rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=LOC111024729 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.5e-15
Identity = 59/147 (40.14%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 29  ISFTPQGASSDAYGDFIKQVRQHLTFNTKQVYDIPVLNQAAHLRWRFSFIHLSN-SSDRI 88
           +SF+  G++S+ Y  FIK VR  LT  ++ VYDIPVL   A    RF  +HL+N +S+ I
Sbjct: 23  VSFSMLGSTSETYKQFIKNVRSALTVGSQIVYDIPVLKATATGSARFLLVHLTNYNSESI 82

Query: 89  IVAFDLSTASIVGYRSILKSYFFQEAPQEASTVLFVGTISNTLPYTANFSDLEKAAGTTR 148
           IVA D+    +V YR+   +YF  +A  EA  VLF G     L Y  N+  LE AA  +R
Sbjct: 83  IVAIDVVNVYVVAYRAGNNAYFLNDASAEADRVLFQGINHVKLSYKGNYDGLETAAKISR 142

Query: 149 ANIPLGPSPFGDTM------RTTTSVP 169
             I LG S    ++         TSVP
Sbjct: 143 EKIDLGFSEISSSIGNMFHHNAGTSVP 169

[Close]

BLAST of Lcy05g012000 vs. NCBI nr
Match: ABG47419.1 (ribosome-inactivating protein [Malus domestica])

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-18
Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = 0


Query: 29  ISFTPQGASSDAYGDFIKQVRQHLTFNTKQVYDIPVLNQAAHLRWRFSFIHLSNS-SDRI 88
           ISF+  GA+S++Y  FIK +R  LT     +YDIPVLN +     RF  + LSN+ ++ I
Sbjct: 24  ISFSTSGATSNSYNTFIKALRAQLTNGATAIYDIPVLNPSVPDSQRFLLVDLSNNGNNTI 83

Query: 89  IVAFDLSTASIVGYRS-ILKSYFFQEAPQEASTVLFVGTISNTLPYTANFSDLEKAAGTT 148
            VA D+  AS+V YR+   + YF  +AP EA  +LF  T    LP+T+N+ DLEKAA  +
Sbjct: 84  TVAIDVVNASVVAYRARAARPYFLADAPDEALDILFNDTRGFFLPFTSNYLDLEKAAEKS 143

Query: 149 RANIPLGPSP 157
           R  IPLG +P
Sbjct: 144 REKIPLGLTP 153

[Close]

BLAST of Lcy05g012000 vs. NCBI nr
Match: RXH91676.1 (hypothetical protein DVH24_020699 [Malus domestica])

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-18
Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = 0


Query: 29  ISFTPQGASSDAYGDFIKQVRQHLTFNTKQVYDIPVLNQAAHLRWRFSFIHLSNS-SDRI 88
           ISF+  GA+S++Y  FIK +R  LT     +YDIPVLN +     RF  + LSN+ ++ I
Sbjct: 24  ISFSTSGATSNSYNTFIKALRAQLTNGATAIYDIPVLNPSVPDSQRFLLVDLSNNGNNTI 83

Query: 89  IVAFDLSTASIVGYRS-ILKSYFFQEAPQEASTVLFVGTISNTLPYTANFSDLEKAAGTT 148
            VA D+  AS+V YR+   + YF  +AP EA  +LF  T    LP+T+N+ DLEKAA  +
Sbjct: 84  TVAIDVVNASVVAYRARAARPYFLADAPDEALDILFNDTRGFFLPFTSNYVDLEKAAEKS 143

Query: 149 RANIPLGPSP 157
           R  IPLG +P
Sbjct: 144 REKIPLGLTP 153

[Close]

BLAST of Lcy05g012000 vs. NCBI nr
Match: XP_008357384.2 (ribosome-inactivating protein SNAIf-like [Malus domestica])

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-18
Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = 0


Query: 29  ISFTPQGASSDAYGDFIKQVRQHLTFNTKQVYDIPVLNQAAHLRWRFSFIHLSNS-SDRI 88
           ISF+  GA+S++Y  FIK +R  LT     +YDIPVLN +     RF  + LSN+ ++ I
Sbjct: 24  ISFSTSGATSNSYNTFIKALRAQLTNGATAIYDIPVLNPSVPDSQRFLLVDLSNNGNNTI 83

Query: 89  IVAFDLSTASIVGYRS-ILKSYFFQEAPQEASTVLFVGTISNTLPYTANFSDLEKAAGTT 148
            VA D+  AS+V YR+   + YF  +AP EA  +LF  T    LP+T+N+ DLEKAA  +
Sbjct: 84  TVAIDVVNASVVAYRARAARPYFLADAPDEALDILFNDTRGFFLPFTSNYVDLEKAAEKS 143

Query: 149 RANIPLGPSP 157
           R  IPLG +P
Sbjct: 144 RDKIPLGLTP 153

[Close]

BLAST of Lcy05g012000 vs. NCBI nr
Match: TQD86967.1 (hypothetical protein C1H46_027481 [Malus baccata])

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-18
Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = 0


Query: 29  ISFTPQGASSDAYGDFIKQVRQHLTFNTKQVYDIPVLNQAAHLRWRFSFIHLSNS-SDRI 88
           ISF+  GA+S++Y  FIK +R  LT     +YDIPVLN +     RF  + LSN+ ++ I
Sbjct: 24  ISFSTSGATSNSYNKFIKALRAQLTNGATAIYDIPVLNPSVPDSQRFLLVDLSNNGNNTI 83

Query: 89  IVAFDLSTASIVGYRS-ILKSYFFQEAPQEASTVLFVGTISNTLPYTANFSDLEKAAGTT 148
            VA D+  AS+V YR+   + YF  +AP EA  +LF  T    LP+T+N+ DLEKAA  +
Sbjct: 84  TVAIDVVNASVVAYRARAARPYFLADAPDEALDILFNDTRGFFLPFTSNYVDLEKAAEKS 143

Query: 149 RANIPLGPSP 157
           R  IPLG +P
Sbjct: 144 RDKIPLGLTP 153

[Close]

BLAST of Lcy05g012000 vs. NCBI nr
Match: AAC15886.1 (ribosome inactivating protein precursor [Sambucus nigra])

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-15
Identity = 58/157 (36.94%), Postives = 92/157 (58.60%), Query Frame = 0


Query: 4   AVLPYKPMVNLLSSQCGIL-VPFPTIISFTPQGASSDAYGDFIKQVRQHLTFNTKQVYDI 63
           A + Y  +V L     GI  + +P+ +SF   GA S  Y DF+K +R  +   T +V  +
Sbjct: 6   AAMLYLYIVVLAICSVGIQGIDYPS-VSFNLAGAKSATYRDFLKNLRTIVATGTYEVNGL 65

Query: 64  PVLNQAA--HLRWRFSFIHLSN-SSDRIIVAFDLSTASIVGYRSILKSYFFQEAPQEAST 123
           PVL + +   ++ RF  + L+N + + + +A D++   +V + +   SYFF++A Q   +
Sbjct: 66  PVLRRESEVQVKNRFVLVLLTNYNGNTVTLAVDVTNLYVVAFSANANSYFFKDATQLQKS 125

Query: 124 VLFVGTISNTLPYTANFSDLEKAAGTTRANIPLGPSP 157
            LFVGT  +TLP+T N+ +LE AAGT R +I LGPSP
Sbjct: 126 NLFVGTRQHTLPFTGNYDNLETAAGTRRESIELGPSP 161

The following BLAST results are available for this feature:

BLAST of Lcy05g012000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P09989	1.2e-17	42.97	Ribosome-inactivating protein alpha-trichosanthin OS=Trichosanthes kirilowii OX=...	[more]
P33183	4.6e-17	35.03	Nigrin b OS=Sambucus nigra OX=4202 PE=1 SV=2	[more]
P24478	1.3e-16	42.19	Ribosome-inactivating protein karasurin-C OS=Trichosanthes kirilowii OX=3677 PE=...	[more]
Q06077	1.7e-16	41.09	Abrin-b OS=Abrus precatorius OX=3816 PE=1 SV=1	[more]
P11140	2.3e-16	39.84	Abrin-a OS=Abrus precatorius OX=3816 PE=1 SV=2	[more]

BLAST of Lcy05g012000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A498J952	5.1e-19	45.38	rRNA N-glycosidase OS=Malus domestica OX=3750 GN=DVH24_020699 PE=3 SV=1	[more]
Q0ZAI5	5.1e-19	45.38	rRNA N-glycosidase OS=Malus domestica OX=3750 PE=2 SV=1	[more]
A0A540LKG3	6.7e-19	45.38	rRNA N-glycosidase OS=Malus baccata OX=106549 GN=C1H46_027481 PE=3 SV=1	[more]
O04367	6.9e-16	36.94	rRNA N-glycosidase OS=Sambucus nigra OX=4202 PE=2 SV=1	[more]
A0A6J1DVE7	1.5e-15	40.14	rRNA N-glycosidase OS=Momordica charantia OX=3673 GN=LOC111024729 PE=3 SV=1	[more]

BLAST of Lcy05g012000 vs. NCBI nr


Match Name	E-value	Identity	Description
ABG47419.1	1.1e-18	45.38	ribosome-inactivating protein [Malus domestica]	[more]
RXH91676.1	1.1e-18	45.38	hypothetical protein DVH24_020699 [Malus domestica]	[more]
XP_008357384.2	1.4e-18	45.38	ribosome-inactivating protein SNAIf-like [Malus domestica]	[more]
TQD86967.1	1.4e-18	45.38	hypothetical protein C1H46_027481 [Malus baccata]	[more]
AAC15886.1	1.4e-15	36.94	ribosome inactivating protein precursor [Sambucus nigra]	[more]

BLAST of Lcy05g012000 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017989	Ribosome-inactivating protein type 1/2	PRINTS	PR00396	SHIGARICIN	coord: 147..161 score: 33.33 coord: 39..52 score: 31.95 coord: 86..101 score: 28.12
IPR001574	Ribosome-inactivating protein	PFAM	PF00161	RIP	coord: 37..163 e-value: 6.8E-12 score: 45.4
IPR001574	Ribosome-inactivating protein	PANTHER	PTHR33453	FAMILY NOT NAMED	coord: 29..161
IPR016138	Ribosome-inactivating protein, subdomain 1	GENE3D	3.40.420.10	Ricin (A subunit), domain 1	coord: 26..166 e-value: 8.0E-26 score: 92.6
None	No IPR available	PANTHER	PTHR33453:SF14	RRNA N-GLYCOSIDASE	coord: 29..161
IPR036041	Ribosome-inactivating protein superfamily	SUPERFAMILY	56371	Ribosome inactivating proteins (RIP)	coord: 28..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g012000.1	Lcy05g012000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017148	negative regulation of translation
molecular_function	GO:0030598	rRNA N-glycosylase activity