Lcy05g011990 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g011990
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	rRNA N-glycosidase
Location	Chr05: 13762908 .. 13763384 (-)
RNA-Seq Expression	Lcy05g011990
Synteny	Lcy05g011990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGACAACACCAAATTCATTCCAAATCCCACAATTTTAAGCTTGGAGAATAATTGGGTCAACCTTTCTGAACAAACCCAAATGGCATTGACGTTAGAGGGACTCTTTCCACACAGCATTGAAATTTCTAACACCAGTGGAAAAATCATCTTGGTCGATGGCGTTCAATCTCCAATCGTGTCGCAAATCGCTCTACAAGTTTACCGGTGCGCCGTCGGTGTCAGCAGCGGCAGCACTCTCCCATCACTGGTCAATGGGGTACTACAAATTTTGGGCATTGTAGGCTATGACAAATCATGTCAAATTTTGACGAATCGAACCATGCACATTAGCGGCCGAGACGGGTTATGTGTGGACGTAAGTGACAACTTGAACAAAAATCAAAATCCAGTCATATTGTATCCTTGTCACTCTGGAAACAACCAGAAATGGACATTCCAAGACGATGGGACGATTCGTTCCTGGGGTAAATAA

mRNA sequence

ATGAGAGACAACACCAAATTCATTCCAAATCCCACAATTTTAAGCTTGGAGAATAATTGGGTCAACCTTTCTGAACAAACCCAAATGGCATTGACGTTAGAGGGACTCTTTCCACACAGCATTGAAATTTCTAACACCAGTGGAAAAATCATCTTGGTCGATGGCGTTCAATCTCCAATCGTGTCGCAAATCGCTCTACAAGTTTACCGGTGCGCCGTCGGTGTCAGCAGCGGCAGCACTCTCCCATCACTGGTCAATGGGGTACTACAAATTTTGGGCATTGTAGGCTATGACAAATCATGTCAAATTTTGACGAATCGAACCATGCACATTAGCGGCCGAGACGGGTTATGTGTGGACGTAAGTGACAACTTGAACAAAAATCAAAATCCAGTCATATTGTATCCTTGTCACTCTGGAAACAACCAGAAATGGACATTCCAAGACGATGGGACGATTCGTTCCTGGGGTAAATAA

Coding sequence (CDS)

ATGAGAGACAACACCAAATTCATTCCAAATCCCACAATTTTAAGCTTGGAGAATAATTGGGTCAACCTTTCTGAACAAACCCAAATGGCATTGACGTTAGAGGGACTCTTTCCACACAGCATTGAAATTTCTAACACCAGTGGAAAAATCATCTTGGTCGATGGCGTTCAATCTCCAATCGTGTCGCAAATCGCTCTACAAGTTTACCGGTGCGCCGTCGGTGTCAGCAGCGGCAGCACTCTCCCATCACTGGTCAATGGGGTACTACAAATTTTGGGCATTGTAGGCTATGACAAATCATGTCAAATTTTGACGAATCGAACCATGCACATTAGCGGCCGAGACGGGTTATGTGTGGACGTAAGTGACAACTTGAACAAAAATCAAAATCCAGTCATATTGTATCCTTGTCACTCTGGAAACAACCAGAAATGGACATTCCAAGACGATGGGACGATTCGTTCCTGGGGTAAATAA

Protein sequence

MRDNTKFIPNPTILSLENNWVNLSEQTQMALTLEGLFPHSIEISNTSGKIILVDGVQSPIVSQIALQVYRCAVGVSSGSTLPSLVNGVLQILGIVGYDKSCQILTNRTMHISGRDGLCVDVSDNLNKNQNPVILYPCHSGNNQKWTFQDDGTIRSWGK

Homology

[Close]

BLAST of Lcy05g011990 vs. ExPASy Swiss-Prot
Match: U3KRF8 (Seed lectin (Fragments) OS=Trichosanthes anguina OX=50544 PE=1 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 2.6e-24
Identity = 64/158 (40.51%), Postives = 92/158 (58.23%), Query Frame = 0


Query: 2   RDNTKFIPNPTILSLENNWVNLSEQTQMALTLEGLFPHSIEISNTSGKIILVDGVQSPIV 61
           ++   F+P+  I+SLE+NW  +S Q Q + +L+GLF   +E+ N++ ++I VD +  PI+
Sbjct: 179 KNEKTFLPDLAIVSLEDNWSEISLQIQASTSLQGLFGSVVELYNSNNELIEVDSIYYPII 238

Query: 62  -SQIALQVYRCAVGVSSGSTLPSLVNGVLQILGIVGYDKSCQILTNRTMHISGRDGLCVD 121
            + +ALQ+Y C   VS+G                   D  C + T RT  ISGRD LCVD
Sbjct: 239 LANVALQLYHCQ--VSTG-------------------DNECLVET-RTTRISGRDALCVD 298

Query: 122 VSDNLNKNQNPVILYPCHSGNNQKWTFQDDGTIRSWGK 159
           V+  L  + + +ILYPC    NQKWTF  DGT+RS GK
Sbjct: 299 VAGALTSDGSRLILYPCGQQVNQKWTFHSDGTVRSLGK 314

[Close]

BLAST of Lcy05g011990 vs. ExPASy Swiss-Prot
Match: Q9M6E9 (Agglutinin-1 OS=Abrus precatorius OX=3816 GN=AAG PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.1e-20
Identity = 59/160 (36.88%), Postives = 85/160 (53.12%), Query Frame = 0


Query: 1   MRDNTKFIPNPTILSLENNWVNLSEQTQMALTLEGLFPHSIEISNTSGKIILVDGVQSPI 60
           + +   F P+P++LSLEN W  LS   Q   T++  FP ++ + N   + ++V  +  P 
Sbjct: 198 LSNRAAFQPDPSMLSLENTWEPLSRAVQH--TVQDTFPQNVTLINVRQERVVVSSLSHPS 257

Query: 61  VSQIALQVYRCAVGVSSGSTLPSLVNGVLQILGIVGYDKSCQILTNRTMHISGRDGLCVD 120
           VS +AL ++ C     + +  P L+  V++        K C      T+ I GRDGLCVD
Sbjct: 258 VSALALMLFVC--NPLNATQSPLLIRSVVE------QSKICSSHYEPTVRIGGRDGLCVD 317

Query: 121 VSDNLNKNQNPVILYPCHS--GNNQKWTFQDDGTIRSWGK 159
           VSDN   N NP+IL+ C      NQ WT + D TIRS GK
Sbjct: 318 VSDNAYNNGNPIILWKCKDQLEVNQLWTLKSDKTIRSKGK 347

[Close]

BLAST of Lcy05g011990 vs. ExPASy Swiss-Prot
Match: P28590 (Abrin-c OS=Abrus precatorius OX=3816 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-19
Identity = 59/160 (36.88%), Postives = 86/160 (53.75%), Query Frame = 0


Query: 1   MRDNTKFIPNPTILSLENNWVNLSEQTQMALTLEGLFPHSIEISNTSGKIILVDGVQSPI 60
           +R  T F P+P +LSLENNW NLS   Q   +++  FP+++ +S+ + + ++VD +  P 
Sbjct: 213 IRTGTAFQPDPAMLSLENNWDNLSGGVQQ--SVQDTFPNNVILSSINRQPVVVDSLSHPT 272

Query: 61  VSQIALQVYRCAVGVSSGSTLPSLVNGVLQILGIVGYDKSCQILTNRTMHISGRDGLCVD 120
           V+ +AL ++ C          P+     L I  IV   K C      T+ I GRDG+CVD
Sbjct: 273 VAVLALMLFVC--------NPPNANQSPLLIRSIVEESKICSSRYEPTVRIGGRDGMCVD 332

Query: 121 VSDNLNKNQNPVILYPCHS--GNNQKWTFQDDGTIRSWGK 159
           V D+   N N +I + C      NQ WT + D TIRS GK
Sbjct: 333 VYDDGYHNGNRIIAWKCKDRLEENQLWTLKSDKTIRSNGK 362

[Close]

BLAST of Lcy05g011990 vs. ExPASy Swiss-Prot
Match: P11140 (Abrin-a OS=Abrus precatorius OX=3816 PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 3.3e-19
Identity = 57/160 (35.62%), Postives = 84/160 (52.50%), Query Frame = 0


Query: 1   MRDNTKFIPNPTILSLENNWVNLSEQTQMALTLEGLFPHSIEISNTSGKIILVDGVQSPI 60
           ++  T F P+  ++SLENNW NLS   Q   +++  FP+ + ++N   + ++VD +  P 
Sbjct: 179 IQTGTAFQPDAAMISLENNWDNLSRGVQE--SVQDTFPNQVTLTNIRNEPVIVDSLSHPT 238

Query: 61  VSQIALQVYRCAVGVSSGSTLPSLVNGVLQILGIVGYDKSCQILTNRTMHISGRDGLCVD 120
           V+ +AL ++ C          P+     L I  IV   K C      T+ I GRDG+CVD
Sbjct: 239 VAVLALMLFVC--------NPPNANQSPLLIRSIVEKSKICSSRYEPTVRIGGRDGMCVD 298

Query: 121 VSDNLNKNQNPVILYPCHS--GNNQKWTFQDDGTIRSWGK 159
           V DN   N N +I++ C      NQ WT + D TIRS GK
Sbjct: 299 VYDNGYHNGNRIIMWKCKDRLEENQLWTLKSDKTIRSNGK 328

[Close]

BLAST of Lcy05g011990 vs. ExPASy Swiss-Prot
Match: Q06076 (Abrin-d OS=Abrus precatorius OX=3816 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.3e-19
Identity = 59/160 (36.88%), Postives = 86/160 (53.75%), Query Frame = 0


Query: 1   MRDNTKFIPNPTILSLENNWVNLSEQTQMALTLEGLFPHSIEISNTSGKIILVDGVQSPI 60
           +R  T F P+P +LSLENNW NLS   Q   +++  FP+++ +S+ + + ++VD +  P 
Sbjct: 179 IRTGTAFQPDPAMLSLENNWDNLSGGVQQ--SVQDAFPNNVILSSINRQPVVVDSLSHPT 238

Query: 61  VSQIALQVYRCAVGVSSGSTLPSLVNGVLQILGIVGYDKSCQILTNRTMHISGRDGLCVD 120
           V+ +AL ++ C          P+     L I  IV   K C      T+ I GRDG+CVD
Sbjct: 239 VAVLALMLFVC--------NPPNANQSPLLIRSIVEESKICSSRYEPTVRIGGRDGMCVD 298

Query: 121 VSDNLNKNQNPVILYPCHS--GNNQKWTFQDDGTIRSWGK 159
           V D+   N N +I + C      NQ WT + D TIRS GK
Sbjct: 299 VYDDGYHNGNRIIAWKCKDRLEENQLWTLKSDLTIRSNGK 328

[Close]

BLAST of Lcy05g011990 vs. ExPASy TrEMBL
Match: A0A498J952 (rRNA N-glycosidase OS=Malus domestica OX=3750 GN=DVH24_020699 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.0e-23
Identity = 64/152 (42.11%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 7   FIPNPTILSLENNWVNLSEQTQMALTLEGLFPHSIEISNTSGKIILVDGVQSPIVSQIAL 66
           FIP+P +LSLENNW+ +S +TQ A  L G+F  SI++ +T+  + LVD V S I++ +A 
Sbjct: 203 FIPDPAMLSLENNWLAISWETQHA--LNGVFSKSIQLRSTNNNLFLVDSVSSSIMAGVAF 262

Query: 67  QVYRCAVGVSSGSTLPSLVNGVLQILGIVGYDKSCQILTNRTMHISGRDGLCVDVSDNLN 126
             Y C        T P+++   + ++     D     + NRT HISG +GLCVDV + L+
Sbjct: 263 LFYNCV-------TFPNIIKMPVNVVMGKEIDNEICAVQNRTTHISGLEGLCVDVKNGLD 322

Query: 127 KNQNPVILYPCHSGNNQKWTFQDDGTIRSWGK 159
            + N V ++PC    NQKWTFQ D TIRS  K
Sbjct: 323 SDGNLVQIWPCGQQRNQKWTFQPDETIRSMEK 345

[Close]

BLAST of Lcy05g011990 vs. ExPASy TrEMBL
Match: A0A540LKG3 (rRNA N-glycosidase OS=Malus baccata OX=106549 GN=C1H46_027481 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.0e-23
Identity = 64/152 (42.11%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 7   FIPNPTILSLENNWVNLSEQTQMALTLEGLFPHSIEISNTSGKIILVDGVQSPIVSQIAL 66
           FIP+P +LSLENNW+ +S +TQ A  L G+F  SI++ +T+  + LVD V S I++ +A 
Sbjct: 203 FIPDPAMLSLENNWLAISWETQHA--LNGVFSKSIQLRSTNNNLFLVDSVSSSIMAGVAF 262

Query: 67  QVYRCAVGVSSGSTLPSLVNGVLQILGIVGYDKSCQILTNRTMHISGRDGLCVDVSDNLN 126
             Y C        T P+++   + ++     D     + NRT HISG +GLCVDV + L+
Sbjct: 263 LFYNCV-------TFPNIIKMPVNVVMGKEIDNEICAVQNRTTHISGLEGLCVDVKNGLD 322

Query: 127 KNQNPVILYPCHSGNNQKWTFQDDGTIRSWGK 159
            + N V ++PC    NQKWTFQ D TIRS  K
Sbjct: 323 SDGNLVQIWPCGQQRNQKWTFQPDETIRSMEK 345

[Close]

BLAST of Lcy05g011990 vs. ExPASy TrEMBL
Match: A0A6A4L4D0 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_15736 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.6e-22
Identity = 63/147 (42.86%), Postives = 88/147 (59.86%), Query Frame = 0


Query: 13  ILSLENNWVNLSEQTQMALTLEGLFPHSIEISNTSGKIILVDGVQSPIVSQIALQVYRCA 72
           +LSLEN W +LS   Q   +L+G+F  S+E+ N S   ++V  +QS ++  +AL +YRC 
Sbjct: 1   MLSLENAWSSLSAAIQS--SLDGVFNRSVELRNVSNLPVIVASIQSTVILDLALLLYRCP 60

Query: 73  VGVSSGSTLPSLVNGVLQILGIVGYDKSCQILTNRTMHISGRDGLCVDVSDNLNKNQNPV 132
            G  S   + +L       L  VG    C IL N T H+SGRDG C+DV D  + + NP+
Sbjct: 61  AGPRSDDAILALPGITRTPLSTVGDHDECTIL-NSTRHLSGRDGFCMDVRDGRDNDGNPI 120

Query: 133 ILYPC-HSGNNQKWTFQDDGTIRSWGK 159
            L+PC    +NQ+WTF+ DGTIRS GK
Sbjct: 121 QLWPCGQQQSNQQWTFRTDGTIRSLGK 144

[Close]

BLAST of Lcy05g011990 vs. ExPASy TrEMBL
Match: A0A1S3C7Q1 (rRNA N-glycosidase OS=Cucumis melo OX=3656 GN=LOC103497644 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.8e-20
Identity = 60/153 (39.22%), Postives = 92/153 (60.13%), Query Frame = 0


Query: 7   FIPNPTILSLENNWVNLSEQTQMALTLEGLFPHSIEISNTSGKIILVDGVQSP-IVSQIA 66
           F P+   +SL++NWV LS Q Q++ +L+G+F   I++ +++ KII VD +  P I+  IA
Sbjct: 200 FKPSLAFVSLQDNWVKLSSQIQVSPSLQGIFGEVIQLYDSNDKIIQVDAIDYPIIIPNIA 259

Query: 67  LQVYRCAVGVSSGSTLPSLVNGVLQILGIVGYDKSCQILTNRTMHISGRDGLCVDVSDNL 126
           +Q++                N   +I+ +   +  C +  +RT HI GR GLCVDV + L
Sbjct: 260 MQLHHHC-------------NVSKKIIKMTVQNDPCNV-QSRTTHIIGRAGLCVDVENRL 319

Query: 127 NKNQNPVILYPCHSGNNQKWTFQDDGTIRSWGK 159
           + + +P+ILYPC    NQ+WTFQ DGTI+S GK
Sbjct: 320 SNDGSPLILYPCRQQMNQRWTFQRDGTIQSLGK 338

[Close]

BLAST of Lcy05g011990 vs. ExPASy TrEMBL
Match: B1NQB9 (rRNA N-glycosidase OS=Abrus pulchellus subsp. tenuiflorus OX=192851 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.2e-19
Identity = 60/160 (37.50%), Postives = 88/160 (55.00%), Query Frame = 0


Query: 1   MRDNTKFIPNPTILSLENNWVNLSEQTQMALTLEGLFPHSIEISNTSGKIILVDGVQSPI 60
           +R  T F P+P ++SLENNW NLS   Q   +++  FP+ + + + + + ++VD +  P 
Sbjct: 212 IRTGTAFQPDPAMISLENNWDNLSAGVQR--SVQDTFPNEVTLRSINNRPVIVDSLSHPT 271

Query: 61  VSQIALQVYRCAVGVSSGSTLPSLVNGVLQILGIVGYDKSCQILTNRTMHISGRDGLCVD 120
           V+ +AL ++ C          P+     L I  +V   K C      T+ ISGRDG+CVD
Sbjct: 272 VAVLALMLFVC--------NPPNANQSPLLIRSVVEKSKICSSDYEPTVRISGRDGMCVD 331

Query: 121 VSDNLNKNQNPVILYPCHS--GNNQKWTFQDDGTIRSWGK 159
           VSDN   N NP+I++ C      NQ WT + D TIRS GK
Sbjct: 332 VSDNAYHNGNPIIMWKCKDQLEENQLWTLKRDKTIRSKGK 361

[Close]

BLAST of Lcy05g011990 vs. NCBI nr
Match: XP_008357384.2 (ribosome-inactivating protein SNAIf-like [Malus domestica])

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-23
Identity = 64/152 (42.11%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 7   FIPNPTILSLENNWVNLSEQTQMALTLEGLFPHSIEISNTSGKIILVDGVQSPIVSQIAL 66
           FIP+P +LSLENNW+ +S +TQ A  L G+F  SI++ +T+  + LVD V S I++ +A 
Sbjct: 203 FIPDPAMLSLENNWLAISWETQHA--LNGVFSKSIQLRSTNNNLFLVDSVSSSIMAGVAF 262

Query: 67  QVYRCAVGVSSGSTLPSLVNGVLQILGIVGYDKSCQILTNRTMHISGRDGLCVDVSDNLN 126
             Y C        T P+++   + ++     D     + NRT HISG +GLCVDV + L+
Sbjct: 263 LFYNCV-------TFPNIIKMPVNVVMGKEIDNEICAVQNRTTHISGLEGLCVDVKNGLD 322

Query: 127 KNQNPVILYPCHSGNNQKWTFQDDGTIRSWGK 159
            + N V ++PC    NQKWTFQ D TIRS  K
Sbjct: 323 SDGNLVQIWPCGQQRNQKWTFQPDETIRSMEK 345

[Close]

BLAST of Lcy05g011990 vs. NCBI nr
Match: RXH91676.1 (hypothetical protein DVH24_020699 [Malus domestica])

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-23
Identity = 64/152 (42.11%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 7   FIPNPTILSLENNWVNLSEQTQMALTLEGLFPHSIEISNTSGKIILVDGVQSPIVSQIAL 66
           FIP+P +LSLENNW+ +S +TQ A  L G+F  SI++ +T+  + LVD V S I++ +A 
Sbjct: 203 FIPDPAMLSLENNWLAISWETQHA--LNGVFSKSIQLRSTNNNLFLVDSVSSSIMAGVAF 262

Query: 67  QVYRCAVGVSSGSTLPSLVNGVLQILGIVGYDKSCQILTNRTMHISGRDGLCVDVSDNLN 126
             Y C        T P+++   + ++     D     + NRT HISG +GLCVDV + L+
Sbjct: 263 LFYNCV-------TFPNIIKMPVNVVMGKEIDNEICAVQNRTTHISGLEGLCVDVKNGLD 322

Query: 127 KNQNPVILYPCHSGNNQKWTFQDDGTIRSWGK 159
            + N V ++PC    NQKWTFQ D TIRS  K
Sbjct: 323 SDGNLVQIWPCGQQRNQKWTFQPDETIRSMEK 345

[Close]

BLAST of Lcy05g011990 vs. NCBI nr
Match: TQD86967.1 (hypothetical protein C1H46_027481 [Malus baccata])

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-23
Identity = 64/152 (42.11%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 7   FIPNPTILSLENNWVNLSEQTQMALTLEGLFPHSIEISNTSGKIILVDGVQSPIVSQIAL 66
           FIP+P +LSLENNW+ +S +TQ A  L G+F  SI++ +T+  + LVD V S I++ +A 
Sbjct: 203 FIPDPAMLSLENNWLAISWETQHA--LNGVFSKSIQLRSTNNNLFLVDSVSSSIMAGVAF 262

Query: 67  QVYRCAVGVSSGSTLPSLVNGVLQILGIVGYDKSCQILTNRTMHISGRDGLCVDVSDNLN 126
             Y C        T P+++   + ++     D     + NRT HISG +GLCVDV + L+
Sbjct: 263 LFYNCV-------TFPNIIKMPVNVVMGKEIDNEICAVQNRTTHISGLEGLCVDVKNGLD 322

Query: 127 KNQNPVILYPCHSGNNQKWTFQDDGTIRSWGK 159
            + N V ++PC    NQKWTFQ D TIRS  K
Sbjct: 323 SDGNLVQIWPCGQQRNQKWTFQPDETIRSMEK 345

[Close]

BLAST of Lcy05g011990 vs. NCBI nr
Match: KAG5543116.1 (hypothetical protein RHGRI_016012 [Rhododendron griersonianum])

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-22
Identity = 63/158 (39.87%), Postives = 94/158 (59.49%), Query Frame = 0


Query: 3   DNTKFIPNPTILSLENNWVNLSEQTQMALTLEGLFPHSIEISNTSGKIILVDGVQSPIVS 62
           +   F+P+P +LSLEN W +LS   Q +L    +F   + + +     ++VD +   +++
Sbjct: 203 NGNSFLPDPGMLSLENGWSSLSTAIQCSLG-GVVFNRPVTLRSVGNNPVIVDSISHAVIT 262

Query: 63  QIALQVYRCAV-GVSSGSTLPSLVNGVLQI-LGIVGYDKSCQILTNRTMHISGRDGLCVD 122
            +AL +YRC   G+ S   + +L   +++I    VG D  C IL   + HISGRDGLCVD
Sbjct: 263 GLALLLYRCPTGGLGSNDAILALPGSIIRIPFSSVGDDDECTILA--STHISGRDGLCVD 322

Query: 123 VSDNLNKNQNPVILYPCHSGNNQKWTFQDDGTIRSWGK 159
           V D  + + NP+ L+PC   +NQ+WTFQ DGTIRS GK
Sbjct: 323 VRDEKDDDGNPIQLWPCGQQSNQQWTFQTDGTIRSLGK 357

[Close]

BLAST of Lcy05g011990 vs. NCBI nr
Match: XP_038877566.1 (seed lectin-like [Benincasa hispida])

HSP 1 Score: 116.7 bits (291), Expect = 1.8e-22
Identity = 65/153 (42.48%), Postives = 92/153 (60.13%), Query Frame = 0


Query: 7   FIPNPTILSLENNWVNLSEQTQMALTLEGLFPHSIEISNTSGKIILVDGVQSPIV-SQIA 66
           F P+  I+SL++NWV LS Q Q + +L+GLF   IE+ +++ KII VD +  PI+ + IA
Sbjct: 202 FKPSLAIVSLQDNWVRLSSQIQASSSLQGLFGEVIELYDSNDKIIRVDAIDYPIILTNIA 261

Query: 67  LQVYRCAVGVSSGSTLPSLVNGVLQILGIVGYDKSCQILTNRTMHISGRDGLCVDVSDNL 126
           +Q+Y C V  +              I+ +   + SC I ++ T  ISGR GLC DV +  
Sbjct: 262 MQLYHCNVSTN--------------IIKMTVQNDSCYIQSHST-RISGRAGLCADVKNGF 321

Query: 127 NKNQNPVILYPCHSGNNQKWTFQDDGTIRSWGK 159
           + + NP+ILYPC    NQ WTFQ DGTI+S GK
Sbjct: 322 SNDGNPIILYPCGQQANQNWTFQRDGTIQSLGK 339

The following BLAST results are available for this feature:

BLAST of Lcy05g011990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
U3KRF8	2.6e-24	40.51	Seed lectin (Fragments) OS=Trichosanthes anguina OX=50544 PE=1 SV=2	[more]
Q9M6E9	5.1e-20	36.88	Agglutinin-1 OS=Abrus precatorius OX=3816 GN=AAG PE=1 SV=1	[more]
P28590	2.0e-19	36.88	Abrin-c OS=Abrus precatorius OX=3816 PE=1 SV=1	[more]
P11140	3.3e-19	35.63	Abrin-a OS=Abrus precatorius OX=3816 PE=1 SV=2	[more]
Q06076	3.3e-19	36.88	Abrin-d OS=Abrus precatorius OX=3816 PE=2 SV=1	[more]

BLAST of Lcy05g011990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A498J952	1.0e-23	42.11	rRNA N-glycosidase OS=Malus domestica OX=3750 GN=DVH24_020699 PE=3 SV=1	[more]
A0A540LKG3	1.0e-23	42.11	rRNA N-glycosidase OS=Malus baccata OX=106549 GN=C1H46_027481 PE=3 SV=1	[more]
A0A6A4L4D0	2.6e-22	42.86	Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3...	[more]
A0A1S3C7Q1	1.8e-20	39.22	rRNA N-glycosidase OS=Cucumis melo OX=3656 GN=LOC103497644 PE=3 SV=1	[more]
B1NQB9	1.2e-19	37.50	rRNA N-glycosidase OS=Abrus pulchellus subsp. tenuiflorus OX=192851 PE=2 SV=1	[more]

BLAST of Lcy05g011990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008357384.2	2.1e-23	42.11	ribosome-inactivating protein SNAIf-like [Malus domestica]	[more]
RXH91676.1	2.1e-23	42.11	hypothetical protein DVH24_020699 [Malus domestica]	[more]
TQD86967.1	2.1e-23	42.11	hypothetical protein C1H46_027481 [Malus baccata]	[more]
KAG5543116.1	1.1e-22	39.87	hypothetical protein RHGRI_016012 [Rhododendron griersonianum]	[more]
XP_038877566.1	1.8e-22	42.48	seed lectin-like [Benincasa hispida]	[more]

BLAST of Lcy05g011990 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000772	Ricin B, lectin domain	PFAM	PF00652	Ricin_B_lectin	coord: 109..155 e-value: 6.6E-10 score: 39.3
IPR000772	Ricin B, lectin domain	PROSITE	PS50231	RICIN_B_LECTIN	coord: 105..158 score: 16.154999
IPR000772	Ricin B, lectin domain	CDD	cd00161	RICIN	coord: 108..158 e-value: 1.02763E-9 score: 51.3522
IPR016139	Ribosome-inactivating protein, subdomain 2	GENE3D	4.10.470.10	Ricin (A Subunit), domain 2	coord: 1..95 e-value: 2.7E-16 score: 61.6
None	No IPR available	GENE3D	2.80.10.50		coord: 100..158 e-value: 1.1E-15 score: 59.8
None	No IPR available	PANTHER	PTHR33453:SF14	RRNA N-GLYCOSIDASE	coord: 4..158
IPR001574	Ribosome-inactivating protein	PANTHER	PTHR33453	FAMILY NOT NAMED	coord: 4..158
IPR035992	Ricin B-like lectins	SUPERFAMILY	50370	Ricin B-like lectins	coord: 107..157
IPR036041	Ribosome-inactivating protein superfamily	SUPERFAMILY	56371	Ribosome inactivating proteins (RIP)	coord: 4..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g011990.1	Lcy05g011990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017148	negative regulation of translation
molecular_function	GO:0030598	rRNA N-glycosylase activity