Lcy05g011330 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g011330
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	E3 ubiquitin-protein ligase RING1-like
Location	Chr05: 12944898 .. 12945671 (+)
RNA-Seq Expression	Lcy05g011330
Synteny	Lcy05g011330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGAACTTTAAATCCCTCTTTCCCTCTCCTTCTTTCCCATTCAAACCCTAATCTCATCGATCGATCGCCATGGAATATCTCGTTTTACAACATCAAACAGGCAATTTAACAGTCCATGTCAAAGCAGCAGCTCCCACATCAAAACTCCAGCAACTCCCTCAATCCCCGTTGCCCCTCAGACTCAGAACCATCAGCCTCAAATTCAGAGTCCAAGTAAAATGCCGCCACGTTCAAGTAGCTCGAGATCGTCGCAACATCGTCGTAACATCGATATACCGACACAAACTCCGAGAGCTTCCGTTCGGAGTCTACGAAATTCCCCTCCACTTCTTGGAATTCCCCAACAGCGATTCACTGAAATACTACCTGACATTGCTGTTCGCGAGATACAGATACGGCATCGACGCCAAGGCCGTGGCAGACGCGATCAAAGCCAGGTGGATGGCGATTCGAGACTATGCGAATTTTGCGAATGCGTTTGGGAGATCGGTGTGTCCTCTGACGGTGACTCTGAAATTGTGGAGTTTTGTGATGTTTGAGAGTAGTGTTTGGAGTAATGGTGCGAAGAAGAAGATGATGATGCTGAAGAGAGTGAGATTTGAGGAGATTGAAGGAGATGAAAGGAGTTGTGTGATTTGCTTGGAGGGTTTGGAGGAAGAGAGTTCGATAGTGGAAATGCCTTGCTTGCATTTGTTTGATGAGAATTGTCTTGACAAGTGGTTGGAGAAGAACCCTTCTTGTCCCATTTGCAGGTTTCAATTGCCTACAAATTAA

mRNA sequence

ACGAACTTTAAATCCCTCTTTCCCTCTCCTTCTTTCCCATTCAAACCCTAATCTCATCGATCGATCGCCATGGAATATCTCGTTTTACAACATCAAACAGGCAATTTAACAGTCCATGTCAAAGCAGCAGCTCCCACATCAAAACTCCAGCAACTCCCTCAATCCCCGTTGCCCCTCAGACTCAGAACCATCAGCCTCAAATTCAGAGTCCAAGTAAAATGCCGCCACGTTCAAGTAGCTCGAGATCGTCGCAACATCGTCGTAACATCGATATACCGACACAAACTCCGAGAGCTTCCGTTCGGAGTCTACGAAATTCCCCTCCACTTCTTGGAATTCCCCAACAGCGATTCACTGAAATACTACCTGACATTGCTGTTCGCGAGATACAGATACGGCATCGACGCCAAGGCCGTGGCAGACGCGATCAAAGCCAGGTGGATGGCGATTCGAGACTATGCGAATTTTGCGAATGCGTTTGGGAGATCGGTGTGTCCTCTGACGGTGACTCTGAAATTGTGGAGTTTTGTGATGTTTGAGAGTAGTGTTTGGAGTAATGGTGCGAAGAAGAAGATGATGATGCTGAAGAGAGTGAGATTTGAGGAGATTGAAGGAGATGAAAGGAGTTGTGTGATTTGCTTGGAGGGTTTGGAGGAAGAGAGTTCGATAGTGGAAATGCCTTGCTTGCATTTGTTTGATGAGAATTGTCTTGACAAGTGGTTGGAGAAGAACCCTTCTTGTCCCATTTGCAGGTTTCAATTGCCTACAAATTAA

Coding sequence (CDS)

ATGGAATATCTCGTTTTACAACATCAAACAGGCAATTTAACAGTCCATGTCAAAGCAGCAGCTCCCACATCAAAACTCCAGCAACTCCCTCAATCCCCGTTGCCCCTCAGACTCAGAACCATCAGCCTCAAATTCAGAGTCCAAGTAAAATGCCGCCACGTTCAAGTAGCTCGAGATCGTCGCAACATCGTCGTAACATCGATATACCGACACAAACTCCGAGAGCTTCCGTTCGGAGTCTACGAAATTCCCCTCCACTTCTTGGAATTCCCCAACAGCGATTCACTGAAATACTACCTGACATTGCTGTTCGCGAGATACAGATACGGCATCGACGCCAAGGCCGTGGCAGACGCGATCAAAGCCAGGTGGATGGCGATTCGAGACTATGCGAATTTTGCGAATGCGTTTGGGAGATCGGTGTGTCCTCTGACGGTGACTCTGAAATTGTGGAGTTTTGTGATGTTTGAGAGTAGTGTTTGGAGTAATGGTGCGAAGAAGAAGATGATGATGCTGAAGAGAGTGAGATTTGAGGAGATTGAAGGAGATGAAAGGAGTTGTGTGATTTGCTTGGAGGGTTTGGAGGAAGAGAGTTCGATAGTGGAAATGCCTTGCTTGCATTTGTTTGATGAGAATTGTCTTGACAAGTGGTTGGAGAAGAACCCTTCTTGTCCCATTTGCAGGTTTCAATTGCCTACAAATTAA

Protein sequence

MEYLVLQHQTGNLTVHVKAAAPTSKLQQLPQSPLPLRLRTISLKFRVQVKCRHVQVARDRRNIVVTSIYRHKLRELPFGVYEIPLHFLEFPNSDSLKYYLTLLFARYRYGIDAKAVADAIKARWMAIRDYANFANAFGRSVCPLTVTLKLWSFVMFESSVWSNGAKKKMMMLKRVRFEEIEGDERSCVICLEGLEEESSIVEMPCLHLFDENCLDKWLEKNPSCPICRFQLPTN

Homology

[Close]

BLAST of Lcy05g011330 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.8e-11
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 179 EIEGDERSCVICLEGLEEESSIVEMPCLHLFDENCLDKWLEKNPSCPICRFQLPTN 235
           EI+G E  CVICLE  + E ++ EMPC H F   C++KWL  + SCP+CR+++P +
Sbjct: 105 EIDGCEGECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]

BLAST of Lcy05g011330 vs. ExPASy Swiss-Prot
Match: Q6AXU4 (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.0e-11
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 184 ERSCVICLEGLEEESSIVEMPCLHLFDENCLDKWLEKNPSCPICRFQLPTN 235
           E  C +CL   EEE +++EMPC HLF  NC+  WL K  SCP+CR +LPT+
Sbjct: 85  ELKCPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTD 135

[Close]

BLAST of Lcy05g011330 vs. ExPASy Swiss-Prot
Match: Q3T0W3 (E3 ubiquitin-protein ligase RNF181 OS=Bos taurus OX=9913 GN=RNF181 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 184 ERSCVICLEGLEEESSIVEMPCLHLFDENCLDKWLEKNPSCPICRFQLPTN 235
           E  C +CL   EEE + +EMPC HLF  NC+  WL K  SCP+CR +LPT+
Sbjct: 73  ELKCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTD 123

[Close]

BLAST of Lcy05g011330 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 24/61 (39.34%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 174 RVRFEEIEGDERSCVICLEGLEEESSIVEMPCLHLFDENCLDKWLEKNPSCPICRFQLPT 233
           +V  + ++ +   C +C++  E+ S + +MPC H+F ++CL  WLE + SCP+CRF+LPT
Sbjct: 203 KVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPT 262

Query: 234 N 235
           +
Sbjct: 263 D 263

[Close]

BLAST of Lcy05g011330 vs. ExPASy Swiss-Prot
Match: Q9P0P0 (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens OX=9606 GN=RNF181 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-10
Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 184 ERSCVICLEGLEEESSIVEMPCLHLFDENCLDKWLEKNPSCPICRFQLPTN 235
           E  C +CL   EEE + +EMPC HLF  +C+  WL K  SCP+CR++LPT+
Sbjct: 73  ELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCRYELPTD 123

[Close]

BLAST of Lcy05g011330 vs. ExPASy TrEMBL
Match: A0A6J1HDB7 (probable E3 ubiquitin-protein ligase ZFP1 OS=Cucurbita moschata OX=3662 GN=LOC111461780 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 3.4e-39
Identity = 107/230 (46.52%), Postives = 138/230 (60.00%), Query Frame = 0


Query: 10  TGNLTVHVKAAAPTSKLQQLPQSPLPLRLRTISLKFRVQVKCRHVQVARDRRNIVVTSIY 69
           T  LT  V +   T+    L Q   P  L+ ISLKFRV+VKCRH+QVA    N  V S  
Sbjct: 6   TPRLTTSVLSVQVTASPPNLQQPLPPQTLQQISLKFRVEVKCRHIQVA---NNNTVISFT 65

Query: 70  RHKLRELPFGVYEIPLHFLEFPNSDSLKYYLTLLFARYRYGIDAKAVADAIKARWMAIRD 129
            H+ R LPF + ++PL  ++  N+ +L+  L++ F  Y   +D K VAD IK +W+ IR 
Sbjct: 66  AHRYRRLPFPICQLPLAVIDRDNNPALQNCLSVHFDDYSELVDVKKVADEIKRKWIEIRV 125

Query: 130 YANFANAFGRSVCPLTVTLKLWSFVMF-----ESSVWSNGAKKKM-MMLKRVRFEEIEGD 189
             +  NAFGR V  LTVTLK+W+  MF     E  V S    + + MML RVRFEEIE D
Sbjct: 126 REDL-NAFGR-VFRLTVTLKVWNVGMFYNGRVEDGVMSCDRSRGIEMMLMRVRFEEIESD 185

Query: 190 ERSCVICLEGLE-EESSIVEMPCLHLFDENCLDKWLEKNPSCPICRFQLP 233
           +  CVICLE LE  + S+V MPC H+F  NC+ KWL    SCP+CRFQ+P
Sbjct: 186 D-VCVICLEELERRKKSLVGMPCFHVFHRNCIVKWLADTNSCPVCRFQMP 229

[Close]

BLAST of Lcy05g011330 vs. ExPASy TrEMBL
Match: A0A6J1BQW1 (uncharacterized protein LOC111004784 OS=Momordica charantia OX=3673 GN=LOC111004784 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.1e-24
Identity = 89/259 (34.36%), Postives = 133/259 (51.35%), Query Frame = 0


Query: 1   MEYLVLQHQTGNLTVHVKAAAPTSKLQQLPQSPLPLRLRTISLKFRVQVKCRHVQVARDR 60
           M+YL        +TV V+   PT K +Q PQ+  P  +  I LKF   V+C H  V+ + 
Sbjct: 1   MDYLFRHRSIVRMTVEVQ--PPTPKPEQPPQTQ-PDPVEEIRLKFVAVVECSHFLVSTNN 60

Query: 61  RNIVVTSIYRHKLRELPFGVYEIPLHFLEFPNSDSLKYYLTLLFARYRYG--IDAKAVAD 120
                T   RH+  ++P  V++IP+  L+     SL  +L+  F  Y+     +   + D
Sbjct: 61  NFRTTTLTRRHESEKVPLVVHQIPIQILDH-GPQSLHQFLSSKFPAYQNDTVFNIHTITD 120

Query: 121 AIKARWMAIR-DYANFANAFGRSVCPLTVTLKLWSFVMFESSV---------WSNGAKKK 180
            I A W  I+       + F   V PLTVTL+LW+ V+               S+ A ++
Sbjct: 121 KIIATWAEIKQQQEQNLSVFVGKVLPLTVTLRLWNVVVTRHETPMEDRFMIPTSDFAVEE 180

Query: 181 MMMLKRVRFEEIEGDE---RSCVICLE----GLEEESS------IVEMPCLHLFDENCLD 235
             MLKRV+ E+   D+   RSCVICLE     +E+E +      +++MPCLH+F E C+ 
Sbjct: 181 --MLKRVKVEQQFDDDDQIRSCVICLEDISVNMEKEENGEVILLLLQMPCLHVFHEECIK 240

[Close]

BLAST of Lcy05g011330 vs. ExPASy TrEMBL
Match: A0A5D3C4K6 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001670 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.4e-18
Identity = 69/231 (29.87%), Postives = 110/231 (47.62%), Query Frame = 0


Query: 26  LQQLPQSPLPLRLRTISLKFRVQVKCRHVQVARDRRNIVVTSIYRHKLRELPFGVYEIPL 85
           L Q+ Q+  P  +  I LKF+VQ+KC+H QV         T +  H   +  F  +++P+
Sbjct: 33  LNQIDQTSSPTLVEQICLKFKVQLKCQHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPI 92

Query: 86  HFLEFPNSDSLKYYLTLLFARYRYGIDAKAVADAIKARWM----AIRDYANFANAFGRSV 145
              +     +LK  L   F  Y   I+ + +A+ I   W+       D  N +N   + +
Sbjct: 93  SIFKH-GDKTLKRILFREFKMYGDIINIELLANEIIKHWVRKVEEEEDQENNSNVLFKKI 152

Query: 146 CPLTVTLKLWSFVMF-----------ESSVWSNGAKKKMMMLKRVRFEEI--EGDERS-- 205
            PL + ++L    M            +  +          MLKRV  EEI   GD+ S  
Sbjct: 153 YPLEIMIRLLVSKMIRAVQPRLAMIDQPLMVPTSDSAVESMLKRVENEEIMKSGDDESIN 212

Query: 206 CVICLEGLEE-----ESSIVEMPCLHLFDENCLDKWLEKNPSCPICRFQLP 233
           CV+CLE + +     E+++++MPCLH+F E C+ KWL+ +  CP CRF +P
Sbjct: 213 CVVCLEEISKEEKGSETTVLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMP 262

[Close]

BLAST of Lcy05g011330 vs. ExPASy TrEMBL
Match: E5GCQ3 (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.4e-18
Identity = 69/231 (29.87%), Postives = 110/231 (47.62%), Query Frame = 0


Query: 26  LQQLPQSPLPLRLRTISLKFRVQVKCRHVQVARDRRNIVVTSIYRHKLRELPFGVYEIPL 85
           L Q+ Q+  P  +  I LKF+VQ+KC+H QV         T +  H   +  F  +++P+
Sbjct: 33  LNQIDQTSSPTLVEQICLKFKVQLKCQHFQVWEGGNGHSTTLVREHIRSQHSFATFQLPI 92

Query: 86  HFLEFPNSDSLKYYLTLLFARYRYGIDAKAVADAIKARWM----AIRDYANFANAFGRSV 145
              +     +LK  L   F  Y   I+ + +A+ I   W+       D  N +N   + +
Sbjct: 93  SIFKH-GDKTLKRILFREFKMYGDIINIELLANEIIKHWVRKVEEEEDQENNSNVLFKKI 152

Query: 146 CPLTVTLKLWSFVMF-----------ESSVWSNGAKKKMMMLKRVRFEEI--EGDERS-- 205
            PL + ++L    M            +  +          MLKRV  EEI   GD+ S  
Sbjct: 153 YPLEIMIRLLVSKMIRAVQPRLAMIDQPLMVPTSDSAVESMLKRVENEEIMKSGDDESIN 212

Query: 206 CVICLEGLEE-----ESSIVEMPCLHLFDENCLDKWLEKNPSCPICRFQLP 233
           CV+CLE + +     E+++++MPCLH+F E C+ KWL+ +  CP CRF +P
Sbjct: 213 CVVCLEEISKEEKGSETTVLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMP 262

[Close]

BLAST of Lcy05g011330 vs. ExPASy TrEMBL
Match: A0A0A0K2A1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 9.7e-18
Identity = 69/229 (30.13%), Postives = 108/229 (47.16%), Query Frame = 0


Query: 31  QSPLPLRLRTISLKFRVQVKCRHVQVARDRRNIVVTSIYRHKLRELPFGVYEIPLHFLEF 90
           +S  P  ++ I L F+V+VKC+H Q   +      T +  H +   PF   ++P+   + 
Sbjct: 28  RSNSPTSVKQIDLNFKVEVKCQHFQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKH 87

Query: 91  PNSDSLKYYLTLLFARYRYGIDAKAVADAIKARWM-AIRDYANFANAFGRSVCPLTVTLK 150
               +LK  L   F  +R  I+ + V D I   W+  + D     +     + PL +T++
Sbjct: 88  -GDKTLKRLLFQKFQMFRAIINIELVTDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIE 147

Query: 151 LWSFVMFES---------------SVWSNGAKKKMMMLKRVRFEEI--EGDER--SCVIC 210
           +    M ++                  S+ A K   MLKRV  EEI   GD +  SCVIC
Sbjct: 148 VLVLQMIDAVDQPQETIDQPQVRMVPTSDSAMKS--MLKRVENEEIMKVGDYKSISCVIC 207

Query: 211 LEGLEEESS-----IVEMPCLHLFDENCLDKWLEKNPSCPICRFQLPTN 235
           LE + +E       +++MPCLH+F E C+ KWL+ +  CP CRF +  N
Sbjct: 208 LEKISKEEKGSEGVVLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMTIN 253

[Close]

BLAST of Lcy05g011330 vs. NCBI nr
Match: XP_022961194.1 (probable E3 ubiquitin-protein ligase ZFP1 [Cucurbita moschata])

HSP 1 Score: 171.8 bits (434), Expect = 7.1e-39
Identity = 107/230 (46.52%), Postives = 138/230 (60.00%), Query Frame = 0


Query: 10  TGNLTVHVKAAAPTSKLQQLPQSPLPLRLRTISLKFRVQVKCRHVQVARDRRNIVVTSIY 69
           T  LT  V +   T+    L Q   P  L+ ISLKFRV+VKCRH+QVA    N  V S  
Sbjct: 6   TPRLTTSVLSVQVTASPPNLQQPLPPQTLQQISLKFRVEVKCRHIQVA---NNNTVISFT 65

Query: 70  RHKLRELPFGVYEIPLHFLEFPNSDSLKYYLTLLFARYRYGIDAKAVADAIKARWMAIRD 129
            H+ R LPF + ++PL  ++  N+ +L+  L++ F  Y   +D K VAD IK +W+ IR 
Sbjct: 66  AHRYRRLPFPICQLPLAVIDRDNNPALQNCLSVHFDDYSELVDVKKVADEIKRKWIEIRV 125

Query: 130 YANFANAFGRSVCPLTVTLKLWSFVMF-----ESSVWSNGAKKKM-MMLKRVRFEEIEGD 189
             +  NAFGR V  LTVTLK+W+  MF     E  V S    + + MML RVRFEEIE D
Sbjct: 126 REDL-NAFGR-VFRLTVTLKVWNVGMFYNGRVEDGVMSCDRSRGIEMMLMRVRFEEIESD 185

Query: 190 ERSCVICLEGLE-EESSIVEMPCLHLFDENCLDKWLEKNPSCPICRFQLP 233
           +  CVICLE LE  + S+V MPC H+F  NC+ KWL    SCP+CRFQ+P
Sbjct: 186 D-VCVICLEELERRKKSLVGMPCFHVFHRNCIVKWLADTNSCPVCRFQMP 229

[Close]

BLAST of Lcy05g011330 vs. NCBI nr
Match: XP_023516070.1 (E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 162.2 bits (409), Expect = 5.6e-36
Identity = 105/229 (45.85%), Postives = 139/229 (60.70%), Query Frame = 0


Query: 10  TGNLTVHVKAAAPTSKLQQLPQSPLPLRLRTISLKFRVQVKCRHVQVARDRRNIVVTSIY 69
           T  L+V V+A+ P  + Q LP    P  L+ ISLKFRV+VKCRH+QVA    N  V S  
Sbjct: 11  TSILSVQVRASPPDLQ-QPLP----PQTLQQISLKFRVEVKCRHIQVA---NNNTVISFT 70

Query: 70  RHKLRELPFGVYEIPLHFLEFPNSDSLKYYLTLLFARYRYGIDAKAVADAIKARWMAIRD 129
            H+ R LPF +  +PL  +E  +  +L+  L++ FA Y   +D   VAD I  +W+ IR+
Sbjct: 71  AHRYRRLPFPICHLPLALVERDHIPALQNRLSVHFADYSELVDPTKVADEIIRKWIEIRE 130

Query: 130 YANFANAFGRSVCPLTVTLKLWSFVMF-----ESSVWSNGAKKKM-MMLKRVRFEEIEGD 189
             +  NAFGR V  LTVTLK+W+  MF     E  V S    + + M+L RVRFEEIE D
Sbjct: 131 REDL-NAFGR-VFRLTVTLKVWNVGMFYDRRVEDEVMSCDRSRGIEMILMRVRFEEIESD 190

Query: 190 ERSCVICLEGLE-EESSIVEMPCLHLFDENCLDKWLEKNPSCPICRFQL 232
           +  CVICLE L+  + S+V MPC H+F  NC+ KWL    SCP+CRFQ+
Sbjct: 191 D-VCVICLEELKRRKKSLVGMPCFHVFHRNCIVKWLADTNSCPVCRFQM 228

[Close]

BLAST of Lcy05g011330 vs. NCBI nr
Match: XP_022131659.1 (uncharacterized protein LOC111004784 [Momordica charantia])

HSP 1 Score: 122.1 bits (305), Expect = 6.4e-24
Identity = 89/259 (34.36%), Postives = 133/259 (51.35%), Query Frame = 0


Query: 1   MEYLVLQHQTGNLTVHVKAAAPTSKLQQLPQSPLPLRLRTISLKFRVQVKCRHVQVARDR 60
           M+YL        +TV V+   PT K +Q PQ+  P  +  I LKF   V+C H  V+ + 
Sbjct: 1   MDYLFRHRSIVRMTVEVQ--PPTPKPEQPPQTQ-PDPVEEIRLKFVAVVECSHFLVSTNN 60

Query: 61  RNIVVTSIYRHKLRELPFGVYEIPLHFLEFPNSDSLKYYLTLLFARYRYG--IDAKAVAD 120
                T   RH+  ++P  V++IP+  L+     SL  +L+  F  Y+     +   + D
Sbjct: 61  NFRTTTLTRRHESEKVPLVVHQIPIQILDH-GPQSLHQFLSSKFPAYQNDTVFNIHTITD 120

Query: 121 AIKARWMAIR-DYANFANAFGRSVCPLTVTLKLWSFVMFESSV---------WSNGAKKK 180
            I A W  I+       + F   V PLTVTL+LW+ V+               S+ A ++
Sbjct: 121 KIIATWAEIKQQQEQNLSVFVGKVLPLTVTLRLWNVVVTRHETPMEDRFMIPTSDFAVEE 180

Query: 181 MMMLKRVRFEEIEGDE---RSCVICLE----GLEEESS------IVEMPCLHLFDENCLD 235
             MLKRV+ E+   D+   RSCVICLE     +E+E +      +++MPCLH+F E C+ 
Sbjct: 181 --MLKRVKVEQQFDDDDQIRSCVICLEDISVNMEKEENGEVILLLLQMPCLHVFHEECIK 240

[Close]

BLAST of Lcy05g011330 vs. NCBI nr
Match: KAE8645828.1 (hypothetical protein Csa_017274 [Cucumis sativus])

HSP 1 Score: 103.6 bits (257), Expect = 2.4e-18
Identity = 70/229 (30.57%), Postives = 109/229 (47.60%), Query Frame = 0


Query: 31  QSPLPLRLRTISLKFRVQVKCRHVQVARDRRNIVVTSIYRHKLRELPFGVYEIPLHFLEF 90
           +S  P  ++ I L F+V+VKC+H Q   +      T +  H +   PF   ++P+   + 
Sbjct: 294 RSNSPTSVKQIDLNFKVEVKCQHFQAGEEDTTFATTFLSEHIIAHQPFPALQLPVSIFKH 353

Query: 91  PNSDSLKYYLTLLFARYRYGIDAKAVADAIKARWM-AIRDYANFANAFGRSVCPLTVTLK 150
               +LK  L   F  +R  I+ + V D I   W+  + D     +     + PL +T++
Sbjct: 354 -GDKTLKRLLFQKFQMFRAIINIELVTDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIE 413

Query: 151 LWSFVMFES---------------SVWSNGAKKKMMMLKRVRFEEI--EGDER--SCVIC 210
           +    M ++                  S+ A K   MLKRV  EEI   GD +  SCVIC
Sbjct: 414 VLVLQMIDAVDQPQETIDQPQVRMVPTSDSAMKS--MLKRVENEEIMKVGDYKSISCVIC 473

Query: 211 LEGLEEESS-----IVEMPCLHLFDENCLDKWLEKNPSCPICRFQLPTN 235
           LE + +E       +++MPCLH+F E C+ KWL+ +  CP CRF +P N
Sbjct: 474 LEKISKEEKGSEGVVLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMPIN 519

[Close]

BLAST of Lcy05g011330 vs. NCBI nr
Match: KGN43799.1 (hypothetical protein Csa_017222 [Cucumis sativus])

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-17
Identity = 71/223 (31.84%), Postives = 109/223 (48.88%), Query Frame = 0


Query: 35  PLRLRTISLKFRVQVKCRHVQVARDRRNIVVTSIYRHKLRELPFGVYEIPLHFLEFPNSD 94
           P  ++ I+LK +V+VKC+H Q   +      T +  H +   PF  +++P+      N  
Sbjct: 42  PTFVKQINLKLKVEVKCQHFQADEEGDTFASTLMIEHIVSHHPFPTFQLPVSVFRHGNR- 101

Query: 95  SLKYYLTLLFARYRYGIDAKAVADAIKARWM-AIRDYANFANAFGRSVCPLTVTLKLWSF 154
           +LK  L   F  +R  I+ + VAD I   W+    D  N +      + PL +T++L   
Sbjct: 102 TLKRLLFQQFQIFRGIINIQLVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLL 161

Query: 155 VMF-----------ESSVWSNGAKKKMM--MLKRVRFEEI--EGDERS--CVICLEGLEE 214
            M            +  V    A +  M  MLKRV  EEI   G+++S  CVICLE + +
Sbjct: 162 RMIHAIDQPEETIDQPQVTMVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISK 221

Query: 215 -----ESSIVEMPCLHLFDENCLDKWLEKNPSCPICRFQLPTN 235
                E  +++MPCLH+F E C+  WL+ +  CP CRF +P N
Sbjct: 222 KMKGSEGVVLQMPCLHMFHEECIRTWLKTSHYCPTCRFSMPIN 263

[Close]

BLAST of Lcy05g011330 vs. TAIR 10
Match: AT1G26800.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 2.7e-12
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 179 EIEGDERSCVICLEGLEEESSIVEMPCLHLFDENCLDKWLEKNPSCPICRFQLPTN 235
           EI+G E  CVICLE  + E ++ EMPC H F   C++KWL  + SCP+CR+++P +
Sbjct: 105 EIDGCEGECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]

BLAST of Lcy05g011330 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-11
Identity = 24/61 (39.34%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 174 RVRFEEIEGDERSCVICLEGLEEESSIVEMPCLHLFDENCLDKWLEKNPSCPICRFQLPT 233
           +V  + ++ +   C +C++  E+ S + +MPC H+F ++CL  WLE + SCP+CRF+LPT
Sbjct: 203 KVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPT 262

Query: 234 N 235
           +
Sbjct: 263 D 263

[Close]

BLAST of Lcy05g011330 vs. TAIR 10
Match: AT2G29840.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 3.0e-11
Identity = 26/54 (48.15%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 179 EIEGDERSCVICLEGLEEESSIVEMPCLHLFDENCLDKWLEKNPSCPICRFQLP 233
           ++ G+   C ICLE  ++  SIV +PC H FD+ C  KW E N  CP+CRF+LP
Sbjct: 236 DVVGENEMCSICLEEFDDGRSIVALPCGHEFDDECALKWFETNHDCPLCRFKLP 289

[Close]

BLAST of Lcy05g011330 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 66.2 bits (160), Expect = 3.9e-11
Identity = 29/70 (41.43%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 165 AKKKMMMLKRVRFEEIE-GDERSCVICLEGLEEESSIVEMPCLHLFDENCLDKWLEKNPS 224
           +K  +  L RV   +   G E +C +C E  E E+   EMPC HLF ++C+  WL    S
Sbjct: 176 SKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNS 235

Query: 225 CPICRFQLPT 234
           CP+CRF+LP+
Sbjct: 236 CPVCRFELPS 245

[Close]

BLAST of Lcy05g011330 vs. TAIR 10
Match: AT1G18770.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 8.7e-11
Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 187 CVICLEGLEEESSIVEMPCLHLFDENCLDKWLEKNPSCPICRFQLP 233
           C+ICLE   E   +V +PC H FD+ C+ KW E N SCP+CRF+LP
Sbjct: 59  CIICLEEFSEGRRVVTLPCGHDFDDECVLKWFETNHSCPLCRFKLP 104

The following BLAST results are available for this feature:

BLAST of Lcy05g011330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQX2	3.8e-11	48.21	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]
Q6AXU4	5.0e-11	52.94	E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 ...	[more]
Q3T0W3	1.4e-10	52.94	E3 ubiquitin-protein ligase RNF181 OS=Bos taurus OX=9913 GN=RNF181 PE=2 SV=1	[more]
Q8LPN7	1.4e-10	39.34	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q9P0P0	1.9e-10	50.98	E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens OX=9606 GN=RNF181 PE=1 SV=1	[more]

BLAST of Lcy05g011330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HDB7	3.4e-39	46.52	probable E3 ubiquitin-protein ligase ZFP1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1BQW1	3.1e-24	34.36	uncharacterized protein LOC111004784 OS=Momordica charantia OX=3673 GN=LOC111004...	[more]
A0A5D3C4K6	7.4e-18	29.87	Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
E5GCQ3	7.4e-18	29.87	Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0K2A1	9.7e-18	30.13	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 P...	[more]

BLAST of Lcy05g011330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961194.1	7.1e-39	46.52	probable E3 ubiquitin-protein ligase ZFP1 [Cucurbita moschata]	[more]
XP_023516070.1	5.6e-36	45.85	E3 ubiquitin-protein ligase RNF165-like [Cucurbita pepo subsp. pepo]	[more]
XP_022131659.1	6.4e-24	34.36	uncharacterized protein LOC111004784 [Momordica charantia]	[more]
KAE8645828.1	2.4e-18	30.57	hypothetical protein Csa_017274 [Cucumis sativus]	[more]
KGN43799.1	1.2e-17	31.84	hypothetical protein Csa_017222 [Cucumis sativus]	[more]

BLAST of Lcy05g011330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26800.1	2.7e-12	48.21	RING/U-box superfamily protein	[more]
AT3G19950.1	1.0e-11	39.34	RING/U-box superfamily protein	[more]
AT2G29840.1	3.0e-11	48.15	RING/U-box superfamily protein	[more]
AT5G59550.1	3.9e-11	41.43	zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G18770.1	8.7e-11	54.35	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 187..227 e-value: 2.4E-7 score: 40.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 186..228 e-value: 1.3E-13 score: 51.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 187..228 score: 12.902362
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 157..234 e-value: 2.1E-19 score: 71.0
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 88..231
None	No IPR available	PANTHER	PTHR15710:SF67	E3 UBIQUITIN-PROTEIN LIGASE SGR9, AMYLOPLASTIC	coord: 88..231
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 187..228 e-value: 6.98172E-17 score: 70.0233
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 174..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g011330.1	Lcy05g011330.1	mRNA