Lcy05g011060 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g011060
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	GRAS domain-containing protein
Location	Chr05: 12458726 .. 12461099 (+)
RNA-Seq Expression	Lcy05g011060
Synteny	Lcy05g011060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCTTTTTTCCTTTTTCTTTTTTTATTCTTTTTGGGTTCAAAAGAATCCTCCTTCCTCCCTCAATCAAATTTGTCAAACACATAGCCTTTTTTTTTCTCCATAAGAAAGCATGGACATAACTTTTTTCACAGCCAAAGAAGCCCCCACAAGCTTCTTCAACCAAAGCCATGATCATCACCATCATCATCATCTTCATCATCTTCACTTCTCCAACTTAGACATGCAAAGCTCCACTAGCCAGTCGTCGGAGTACTCGCCGGAGCACTCTCCATCCTCTGCTGCCGCCACCGCTGCCGCTGGAAAATGGGCCTCCACCCTTCTCAAGGAGTGTGCTAGAGCCATCTCTGAAAAAGACTCCAACAAAATCCACCATTTTCTTTGGATGTTGAACGAGCTGGCCTCCCCTTATGGCGACTCTGATCAGAAATTGGCTTCCTACTTCTTGCAAGCTCTCTTCTGCAGGGCCACGGAAACTGGCCTCAGTTGCTACAAAACCCTCGTCGCCGTTGCCGAAAAGAATCACTCCTTCGACTCCGCTCTGAGGTTGATCCTCAAGTTCCAAGAGGTAAGAGACAAAATCATCATTAAACTCAAAAGCTTTAAACGGATTAAATTAGTTGTGTCGTTATTTTAATCTCTTATTCATGTTTCAACCCTCTCCTCAAATTCTAGTACAAGTATACTTGAGTGATTATCAATATTTAAGAGCTTAAATCAACTATAGGTTACTTTAAATTTGATATTTTAATTTATTCATATTCTTAACATTCCTCTCCTCTTCACTTGTGGAGTTGAAAATCAGCATAAGTCCCAACTAGTGATTATCAATATCAATTCGGATAGAAATGGCATTACAGAAGTTCGAGTCCAAGATCATTCATTTCTAAAGGTTAAATCACTTTTTTCCCAAGAATATAGTATTATAATTTTTGGGTGGGGACTTGAACTTTCAACATCTAAGAAAACTATGTTACTATGGTCCTAACTGTGAGCTATGTTCATGTTGGCAAACTACTGCACTGAATTCAAAATTTTAAGCTGATGGGGTAACGATGTATATAATTTCTCCAGGCAAGTCCGTGGACGACATTCGGGCATGTGGCATCGAACGGTGCGATTCTCGAGGCCCTCGAGGGAGAATCGAAGCTCCACATCATCGACATAAGCAACACCCTTTGCACCCAATGGCCAACCCTACTAGAATCCCTAGCCACACGCAATGACGACACCCCACATCTCAAGCTCACAGTGGTGGCAACAACAACAATAGTCAAGTCTCTAATGAAGGAAATAGGCCAAAGAATGGAGAAATTCGCAAGGCTAATGGGAGTCCCCTTCGAGTTCAACCCCATAACAAATCTCAACCACTTAACCGACCTCACAAATGAAGCCCTCAAAGTAGAAGAAGACGAAGCCATTGCCATAAATTGCATTGGAGCCTTGAGAAGAGTGAGACTTGAAAAGAGAAACAATGTGATTTCAATGTTGAAATCACTAAAGCCTCGAGTCTTGACGATTGTTGAGGAAGAAGCTGATTTAATGAGCTCAAAAAATGACTTCTTGAAGTGCTTTGAAGAGTGCCTTAGATTCTACACTCTCTACTTTGAGATGTTGGAAGAGAGCTTTGTGGCAACAAGCAATGAGAGATTGGTTTTAGAAAGAGAGTGTTCAAGAAGCATTGTGAGGCTGTTGGGGTGTGATGAAAGTGAAGAAGAAATGGAGAGTGAGAGAAGAGAAAGAGGAAAGCAATGGAGCAAAAGGCTGAAAGAAGCAGCTTTTTCTTCAGCTGGATTTAGTGAAGATGTGATGGATGATGTTAAGGCTTTGCTCAAGAGGTACAAACCCGGTTGGGCGTTGCTGCGTCGGACCGCCACCGACGCCGCCGGAGAAGAAGAAGAAGGTGGTGATGATTCAGGTGGAATTTACTTGACATGGAAGGAAGAACCAGTGGTGTGGGTTTCAGCATGGAAACCCTAGAGGAAAAAATTCACATTATATTATTAAATATTATAATACCACTCTCTCTATATTCATAAAGGTTTTTTTTTTCTCTTTTTTGTATGGGGGTTAAGCCATGAAAATGTTATATATGTGTAGATTTTGTATTCAAATTCTTATATTGTTCTTAATTTCTTGGGGGAGTTTTTGTGTTGATGTGTATTTTTGTTGTTGTTGCCTTTGTTTTTGCTTGGTTTTTTTTTTTTCTTTTTCTATGGGAGTTTGTGGATTTTGCCTGCCCCCATTATTATTTTTACCCTCTTCTCTTTTCAAACTCTCTCATTTGGAAGCAAACACATTCCCAAATTTGGATGGGCTTTGCTTAGTTTCATCTGTGTATTTTTTAGCTGTTGTGAGTTTGTAGCAACTTTTT

mRNA sequence

AAACCTTTTTTCCTTTTTCTTTTTTTATTCTTTTTGGGTTCAAAAGAATCCTCCTTCCTCCCTCAATCAAATTTGTCAAACACATAGCCTTTTTTTTTCTCCATAAGAAAGCATGGACATAACTTTTTTCACAGCCAAAGAAGCCCCCACAAGCTTCTTCAACCAAAGCCATGATCATCACCATCATCATCATCTTCATCATCTTCACTTCTCCAACTTAGACATGCAAAGCTCCACTAGCCAGTCGTCGGAGTACTCGCCGGAGCACTCTCCATCCTCTGCTGCCGCCACCGCTGCCGCTGGAAAATGGGCCTCCACCCTTCTCAAGGAGTGTGCTAGAGCCATCTCTGAAAAAGACTCCAACAAAATCCACCATTTTCTTTGGATGTTGAACGAGCTGGCCTCCCCTTATGGCGACTCTGATCAGAAATTGGCTTCCTACTTCTTGCAAGCTCTCTTCTGCAGGGCCACGGAAACTGGCCTCAGTTGCTACAAAACCCTCGTCGCCGTTGCCGAAAAGAATCACTCCTTCGACTCCGCTCTGAGGTTGATCCTCAAGTTCCAAGAGGCAAGTCCGTGGACGACATTCGGGCATGTGGCATCGAACGGTGCGATTCTCGAGGCCCTCGAGGGAGAATCGAAGCTCCACATCATCGACATAAGCAACACCCTTTGCACCCAATGGCCAACCCTACTAGAATCCCTAGCCACACGCAATGACGACACCCCACATCTCAAGCTCACAGTGGTGGCAACAACAACAATAGTCAAGTCTCTAATGAAGGAAATAGGCCAAAGAATGGAGAAATTCGCAAGGCTAATGGGAGTCCCCTTCGAGTTCAACCCCATAACAAATCTCAACCACTTAACCGACCTCACAAATGAAGCCCTCAAAGTAGAAGAAGACGAAGCCATTGCCATAAATTGCATTGGAGCCTTGAGAAGAGTGAGACTTGAAAAGAGAAACAATGTGATTTCAATGTTGAAATCACTAAAGCCTCGAGTCTTGACGATTGTTGAGGAAGAAGCTGATTTAATGAGCTCAAAAAATGACTTCTTGAAGTGCTTTGAAGAGTGCCTTAGATTCTACACTCTCTACTTTGAGATGTTGGAAGAGAGCTTTGTGGCAACAAGCAATGAGAGATTGGTTTTAGAAAGAGAGTGTTCAAGAAGCATTGTGAGGCTGTTGGGGTGTGATGAAAGTGAAGAAGAAATGGAGAGTGAGAGAAGAGAAAGAGGAAAGCAATGGAGCAAAAGGCTGAAAGAAGCAGCTTTTTCTTCAGCTGGATTTAGTGAAGATGTGATGGATGATGTTAAGGCTTTGCTCAAGAGGTACAAACCCGGTTGGGCGTTGCTGCGTCGGACCGCCACCGACGCCGCCGGAGAAGAAGAAGAAGGTGGTGATGATTCAGGTGGAATTTACTTGACATGGAAGGAAGAACCAGTGGTGTGGGTTTCAGCATGGAAACCCTAGAGGAAAAAATTCACATTATATTATTAAATATTATAATACCACTCTCTCTATATTCATAAAGGTTTTTTTTTTCTCTTTTTTGTATGGGGGTTAAGCCATGAAAATGTTATATATGTGTAGATTTTGTATTCAAATTCTTATATTGTTCTTAATTTCTTGGGGGAGTTTTTGTGTTGATGTGTATTTTTGTTGTTGTTGCCTTTGTTTTTGCTTGGTTTTTTTTTTTTCTTTTTCTATGGGAGTTTGTGGATTTTGCCTGCCCCCATTATTATTTTTACCCTCTTCTCTTTTCAAACTCTCTCATTTGGAAGCAAACACATTCCCAAATTTGGATGGGCTTTGCTTAGTTTCATCTGTGTATTTTTTAGCTGTTGTGAGTTTGTAGCAACTTTTT

Coding sequence (CDS)

ATGGACATAACTTTTTTCACAGCCAAAGAAGCCCCCACAAGCTTCTTCAACCAAAGCCATGATCATCACCATCATCATCATCTTCATCATCTTCACTTCTCCAACTTAGACATGCAAAGCTCCACTAGCCAGTCGTCGGAGTACTCGCCGGAGCACTCTCCATCCTCTGCTGCCGCCACCGCTGCCGCTGGAAAATGGGCCTCCACCCTTCTCAAGGAGTGTGCTAGAGCCATCTCTGAAAAAGACTCCAACAAAATCCACCATTTTCTTTGGATGTTGAACGAGCTGGCCTCCCCTTATGGCGACTCTGATCAGAAATTGGCTTCCTACTTCTTGCAAGCTCTCTTCTGCAGGGCCACGGAAACTGGCCTCAGTTGCTACAAAACCCTCGTCGCCGTTGCCGAAAAGAATCACTCCTTCGACTCCGCTCTGAGGTTGATCCTCAAGTTCCAAGAGGCAAGTCCGTGGACGACATTCGGGCATGTGGCATCGAACGGTGCGATTCTCGAGGCCCTCGAGGGAGAATCGAAGCTCCACATCATCGACATAAGCAACACCCTTTGCACCCAATGGCCAACCCTACTAGAATCCCTAGCCACACGCAATGACGACACCCCACATCTCAAGCTCACAGTGGTGGCAACAACAACAATAGTCAAGTCTCTAATGAAGGAAATAGGCCAAAGAATGGAGAAATTCGCAAGGCTAATGGGAGTCCCCTTCGAGTTCAACCCCATAACAAATCTCAACCACTTAACCGACCTCACAAATGAAGCCCTCAAAGTAGAAGAAGACGAAGCCATTGCCATAAATTGCATTGGAGCCTTGAGAAGAGTGAGACTTGAAAAGAGAAACAATGTGATTTCAATGTTGAAATCACTAAAGCCTCGAGTCTTGACGATTGTTGAGGAAGAAGCTGATTTAATGAGCTCAAAAAATGACTTCTTGAAGTGCTTTGAAGAGTGCCTTAGATTCTACACTCTCTACTTTGAGATGTTGGAAGAGAGCTTTGTGGCAACAAGCAATGAGAGATTGGTTTTAGAAAGAGAGTGTTCAAGAAGCATTGTGAGGCTGTTGGGGTGTGATGAAAGTGAAGAAGAAATGGAGAGTGAGAGAAGAGAAAGAGGAAAGCAATGGAGCAAAAGGCTGAAAGAAGCAGCTTTTTCTTCAGCTGGATTTAGTGAAGATGTGATGGATGATGTTAAGGCTTTGCTCAAGAGGTACAAACCCGGTTGGGCGTTGCTGCGTCGGACCGCCACCGACGCCGCCGGAGAAGAAGAAGAAGGTGGTGATGATTCAGGTGGAATTTACTTGACATGGAAGGAAGAACCAGTGGTGTGGGTTTCAGCATGGAAACCCTAG

Protein sequence

MDITFFTAKEAPTSFFNQSHDHHHHHHLHHLHFSNLDMQSSTSQSSEYSPEHSPSSAAATAAAGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFCRATETGLSCYKTLVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASNGAILEALEGESKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVATTTIVKSLMKEIGQRMEKFARLMGVPFEFNPITNLNHLTDLTNEALKVEEDEAIAINCIGALRRVRLEKRNNVISMLKSLKPRVLTIVEEEADLMSSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLLGCDESEEEMESERRERGKQWSKRLKEAAFSSAGFSEDVMDDVKALLKRYKPGWALLRRTATDAAGEEEEGGDDSGGIYLTWKEEPVVWVSAWKP

Homology

[Close]

BLAST of Lcy05g011060 vs. ExPASy Swiss-Prot
Match: Q9SZF7 (Protein SHORT-ROOT OS=Arabidopsis thaliana OX=3702 GN=SHR PE=1 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.6e-111
Identity = 225/492 (45.73%), Postives = 319/492 (64.84%), Query Frame = 0


Query: 5   FFTAKEAPTSFFNQSHDHHHHHHLHHLHFSNLDMQSSTSQSSEYSPEHSPSSAAAT---- 64
           FF  +E  +S  + SH +HH+H+  + ++S     +    ++  +P  + ++AA      
Sbjct: 57  FFMDEEDLSS--SSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAALASPYS 116

Query: 65  ----------------------AAAGKWASTLLKECARAISEKDSNKIHHFLWMLNELAS 124
                                 +A  KWA ++L E ARA S+KD+ +    LW LNEL+S
Sbjct: 117 SSGHHNDPSAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSS 176

Query: 125 PYGDSDQKLASYFLQALFCRATETGLSCYKTLV--AVAEKNHSFDSALRLILKFQEASPW 184
           PYGD++QKLASYFLQALF R T +G  CY+T+V  A  EK  SF+S  + +LKFQE SPW
Sbjct: 177 PYGDTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPW 236

Query: 185 TTFGHVASNGAILEALEGESKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVATT 244
            TFGHVA+NGAILEA++GE+K+HI+DIS+T CTQWPTLLE+LATR+DDTPHL+LT V   
Sbjct: 237 ATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVA 296

Query: 245 -------TIVKSLMKEIGQRMEKFARLMGVPFEFNPITNLNHLTDLTNEALKVEEDEAIA 304
                  T    +MKEIG RMEKFARLMGVPF+FN I ++  L++     L V+ DE +A
Sbjct: 297 NKFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLA 356

Query: 305 INCIGALRRV--RLEKRNNVISMLKSLKPRVLTIVEEEADLMSSK-----NDFLKCFEEC 364
           INC+GA+  +  R   R+ VIS  + L+PR++T+VEEEADL+  +     ++FL+ F EC
Sbjct: 357 INCVGAMHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGEC 416

Query: 365 LRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLLGCDESEEEMESERRERGKQWSKR 424
           LR++ + FE  EESF  TSNERL+LER   R+IV L+ C+ S+    +ERRE  ++WS+R
Sbjct: 417 LRWFRVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSD---STERRETARKWSRR 476

Query: 425 LKEAAFSSAGFSEDVMDDVKALLKRYKPG-WALLRRTATDAAGEEEEGGDDSGGIYLTWK 454
           ++ + F + G+S++V DDV+ALL+RYK G W++++               D+ GI+L W+
Sbjct: 477 MRNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQ-------------CPDAAGIFLCWR 530

[Close]

BLAST of Lcy05g011060 vs. ExPASy Swiss-Prot
Match: A2XIA8 (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica OX=39946 GN=SHR2 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 6.5e-108
Identity = 218/436 (50.00%), Postives = 286/436 (65.60%), Query Frame = 0


Query: 56  SAAATAAAGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQAL 115
           + AA +++G+WA+ LL ECARA++ +DS ++   +WMLNELASPYGD DQKLASYFLQ L
Sbjct: 177 AGAAPSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGL 236

Query: 116 FCRATETGLSCYKTLVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASNGAILEA-LEG 175
           F R T +G    +TL   +++N SFDS  R  LKFQE SPWT FGHVA+NGAILE+ LE 
Sbjct: 237 FARLTTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEA 296

Query: 176 ------------------ESKLHIIDISNTLCTQWPTLLESLATR-NDDTPHLKLTVV-- 235
                              ++LHI+D+SNT CTQWPTLLE+LATR +DDTPHL +T V  
Sbjct: 297 AAAGAAAASSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVP 356

Query: 236 --ATTTIVKSLMKEIGQRMEKFARLMGVPFEFNPITNLNHLTDLTNEALKVEE---DEAI 295
             A +   + +M+EIGQR+EKFARLMGVPF F  + +   L DL   AL + E     A+
Sbjct: 357 TAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHAGDLADLDLAALDLREGGATAAL 416

Query: 296 AINCIGALRRVRLEKRNNVISMLKSLKPRVLTIVEEEADLMSSKND----------FLKC 355
           A+NC+ ALR V    R+  ++ L+ L+PRV+T+VEEEADL + + D          F+K 
Sbjct: 417 AVNCVNALRGV-ARGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKV 476

Query: 356 FEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLLGCDESEEEMESERRERGKQ 415
           F E LRF++ Y + LEESF  TSNERL LER   R+IV L+ C  S+    +ERRE    
Sbjct: 477 FGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQ---SAERRETAAS 536

Query: 416 WSKRLKEAAFSSAGFSEDVMDDVKALLKRYKPGWALLRRTATDAAG-EEEEGGDDSGGIY 454
           W++R++ A FS A FSEDV DDV++LL+RYK GW++      DA G  ++  G  + G +
Sbjct: 537 WARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSM-----RDAGGATDDAAGAAAAGAF 596

[Close]

BLAST of Lcy05g011060 vs. ExPASy Swiss-Prot
Match: Q75I13 (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR2 PE=1 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 8.4e-108
Identity = 218/436 (50.00%), Postives = 286/436 (65.60%), Query Frame = 0


Query: 56  SAAATAAAGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQAL 115
           + AA +++G+WA+ LL ECARA++ +DS ++   +WMLNELASPYGD DQKLASYFLQ L
Sbjct: 177 AGAAPSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGL 236

Query: 116 FCRATETGLSCYKTLVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASNGAILEA-LEG 175
           F R T +G    +TL   +++N SFDS  R  LKFQE SPWT FGHVA+NGAILE+ LE 
Sbjct: 237 FARLTTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEA 296

Query: 176 ------------------ESKLHIIDISNTLCTQWPTLLESLATR-NDDTPHLKLTVV-- 235
                              ++LHI+D+SNT CTQWPTLLE+LATR +DDTPHL +T V  
Sbjct: 297 AAAGAAASSSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVP 356

Query: 236 --ATTTIVKSLMKEIGQRMEKFARLMGVPFEFNPITNLNHLTDLTNEALKVEE---DEAI 295
             A +   + +M+EIGQR+EKFARLMGVPF F  + +   L DL   AL + E     A+
Sbjct: 357 TAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHSGDLADLDLAALDLREGGATAAL 416

Query: 296 AINCIGALRRVRLEKRNNVISMLKSLKPRVLTIVEEEADLMSSKND----------FLKC 355
           A+NC+ ALR V    R+  ++ L+ L+PRV+T+VEEEADL + + D          F+K 
Sbjct: 417 AVNCVNALRGV-ARGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKV 476

Query: 356 FEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLLGCDESEEEMESERRERGKQ 415
           F E LRF++ Y + LEESF  TSNERL LER   R+IV L+ C  S+    +ERRE    
Sbjct: 477 FGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQ---SAERRETAAS 536

Query: 416 WSKRLKEAAFSSAGFSEDVMDDVKALLKRYKPGWALLRRTATDAAG-EEEEGGDDSGGIY 454
           W++R++ A FS A FSEDV DDV++LL+RYK GW++      DA G  ++  G  + G +
Sbjct: 537 WARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSM-----RDAGGATDDAAGAAAAGAF 596

[Close]

BLAST of Lcy05g011060 vs. ExPASy Swiss-Prot
Match: A2YN56 (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica OX=39946 GN=SHR1 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 3.2e-107
Identity = 221/457 (48.36%), Postives = 288/457 (63.02%), Query Frame = 0


Query: 35  NLDMQSSTSQSSEYSPEHSPSSAAATAAAGKWASTLLKECARAISEKDSNKIHHFLWMLN 94
           NLD  S  S S   +   + S A      G+WAS LL ECAR+++ +DS ++   +WMLN
Sbjct: 163 NLDFSSPASSSGGGT---ASSGAVGGGGGGRWASQLLLECARSVAARDSQRVQQLMWMLN 222

Query: 95  ELASPYGDSDQKLASYFLQALFCRATETGLSCYKTLVAVAEKNHSFDSALRLILKFQEAS 154
           ELASPYGD +QKLASYFLQ LF R T +G    +TL A +++N SFDS  R  L+FQE S
Sbjct: 223 ELASPYGDVEQKLASYFLQGLFARLTASGQRTLRTLAAASDRNTSFDSTRRTALRFQELS 282

Query: 155 PWTTFGHVASNGAILE--------ALEGESKLHIIDISNTLCTQWPTLLESLATRN-DDT 214
           PW++FGHVA+NGAILE        A     + HI+D+SNT CTQWPTLLE+LATR+ D+T
Sbjct: 283 PWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADET 342

Query: 215 PHLKLTVV------ATTTIVKSLMKEIGQRMEKFARLMGVPFEFNPITNLNHLTDLTNEA 274
           PHL +T V      A T  V+ +M+EIGQRMEKFARLMGVPF F  + +   L +L  +A
Sbjct: 343 PHLSITTVVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDA 402

Query: 275 LKVEE---DEAIAINCIGALRRV---RLEKRNNVISMLKSLKPRVLTIVEEEADLMSSKN 334
           L + E     A+A+NC+ +LR V   R  +R+   + L+ L PRV+T+VEEEADL++S  
Sbjct: 403 LDLREGGATTALAVNCVNSLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEEADLVASDP 462

Query: 335 D--------------FLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLL 394
           D              FLK F E LRF++ Y + LEESF  TSNERL LER   R+IV L+
Sbjct: 463 DASSATEEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLV 522

Query: 395 GCDESEEEMESERRERGKQWSKRLKEAAFSSAGFSEDVMDDVKALLKRYKPGWALLRRTA 454
            C  SE     ERRE    W++R++ A FS   FSEDV DDV++LL+RY+ GW++     
Sbjct: 523 SCPASE---SMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSM----- 582

[Close]

BLAST of Lcy05g011060 vs. ExPASy Swiss-Prot
Match: Q8H2X8 (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR1 PE=1 SV=2)

HSP 1 Score: 389.8 bits (1000), Expect = 4.2e-107
Identity = 221/457 (48.36%), Postives = 288/457 (63.02%), Query Frame = 0


Query: 35  NLDMQSSTSQSSEYSPEHSPSSAAATAAAGKWASTLLKECARAISEKDSNKIHHFLWMLN 94
           NLD  S  S S   +   + S A      G+WAS LL ECAR+++ +DS ++   +WMLN
Sbjct: 163 NLDFSSPASSSGGGT---ASSGAVGGGGGGRWASQLLLECARSVAARDSQRVQQLMWMLN 222

Query: 95  ELASPYGDSDQKLASYFLQALFCRATETGLSCYKTLVAVAEKNHSFDSALRLILKFQEAS 154
           ELASPYGD +QKLASYFLQ LF R T +G    +TL A +++N SFDS  R  L+FQE S
Sbjct: 223 ELASPYGDVEQKLASYFLQGLFARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELS 282

Query: 155 PWTTFGHVASNGAILE--------ALEGESKLHIIDISNTLCTQWPTLLESLATRN-DDT 214
           PW++FGHVA+NGAILE        A     + HI+D+SNT CTQWPTLLE+LATR+ D+T
Sbjct: 283 PWSSFGHVAANGAILESFLEVAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADET 342

Query: 215 PHLKLTVV------ATTTIVKSLMKEIGQRMEKFARLMGVPFEFNPITNLNHLTDLTNEA 274
           PHL +T V      A T  V+ +M+EIGQRMEKFARLMGVPF F  + +   L +L  +A
Sbjct: 343 PHLSITTVVSAAPSAPTAAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDA 402

Query: 275 LKVEE---DEAIAINCIGALRRV---RLEKRNNVISMLKSLKPRVLTIVEEEADLMSSKN 334
           L + E     A+A+NC+ +LR V   R  +R+   + L+ L PRV+T+VEEEADL++S  
Sbjct: 403 LDLREGGATTALAVNCVNSLRGVVPGRARRRDAFAASLRRLDPRVVTVVEEEADLVASDP 462

Query: 335 D--------------FLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLL 394
           D              FLK F E LRF++ Y + LEESF  TSNERL LER   R+IV L+
Sbjct: 463 DASSATEEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLV 522

Query: 395 GCDESEEEMESERRERGKQWSKRLKEAAFSSAGFSEDVMDDVKALLKRYKPGWALLRRTA 454
            C  SE     ERRE    W++R++ A FS   FSEDV DDV++LL+RY+ GW++     
Sbjct: 523 SCPASE---SMERRETAASWARRMRSAGFSPVAFSEDVADDVRSLLRRYREGWSM----- 582

[Close]

BLAST of Lcy05g011060 vs. ExPASy TrEMBL
Match: A0A0A0K966 (GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G081510 PE=3 SV=1)

HSP 1 Score: 803.5 bits (2074), Expect = 4.5e-229
Identity = 410/459 (89.32%), Postives = 427/459 (93.03%), Query Frame = 0


Query: 1   MDITFFTAKEAPTSFFNQSHDHHHHHHLHHLHFSNLDMQSSTSQSSEYSPEHSPSSAAAT 60
           MDITFFTAKEAPTSFFNQSHDH HHH LHHLHFSNLDMQSSTS SSEYSPEHSPS+AAA 
Sbjct: 1   MDITFFTAKEAPTSFFNQSHDHRHHHQLHHLHFSNLDMQSSTSHSSEYSPEHSPSAAAAA 60

Query: 61  A---AAGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFC 120
           A   A GKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQK+A YFLQALFC
Sbjct: 61  ATATATGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMAFYFLQALFC 120

Query: 121 RATETGLSCYKTLVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASNGAILEALEGESK 180
           RATETGL+CYKTLVAVAEKNH+FDSALRLILKFQEASPWTTFGHVASNGAILEALEGE+K
Sbjct: 121 RATETGLTCYKTLVAVAEKNHNFDSALRLILKFQEASPWTTFGHVASNGAILEALEGETK 180

Query: 181 LHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVATTTIVKSLMKEIGQRMEKFARLM 240
           LHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVV TT+IVK LMKEIGQRMEKFARLM
Sbjct: 181 LHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTSIVKCLMKEIGQRMEKFARLM 240

Query: 241 GVPFEFNPITNLNHLTDLTNEALKVEEDEAIAINCIGALRRVRLEKRNNVISMLKSLKPR 300
           GVPFEFNPITN++HLTDLTNEALKVEE EAIAINCIGALRRV++E+RNNVISMLKSLKPR
Sbjct: 241 GVPFEFNPITNIDHLTDLTNEALKVEEGEAIAINCIGALRRVKVEERNNVISMLKSLKPR 300

Query: 301 VLTIVEEEADLMSSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVR 360
           VLTIVEEEAD +SSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVR
Sbjct: 301 VLTIVEEEADFISSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVR 360

Query: 361 LLGCDE---SEEEMESERRERGKQWSKRLKEAAFSSAGFSEDVMDDVKALLKRYKPGWAL 420
           LLGCD    SEEE+ SERRE+GKQW+KRLK+A FSSA FSEDVMDDVKALLKRYKPGWAL
Sbjct: 361 LLGCDHDQISEEEIGSERREKGKQWTKRLKQALFSSANFSEDVMDDVKALLKRYKPGWAL 420

Query: 421 LRRTATDAAGEEEEGGDDSGGIYLTWKEEPVVWVSAWKP 454
           LR        EEE G  +S GIYLTWKEEPVVWVSAWKP
Sbjct: 421 LRPATAAVRDEEENGDGESSGIYLTWKEEPVVWVSAWKP 459

[Close]

BLAST of Lcy05g011060 vs. ExPASy TrEMBL
Match: A0A1S3CCT8 (protein SHORT-ROOT-like OS=Cucumis melo OX=3656 GN=LOC103498966 PE=3 SV=1)

HSP 1 Score: 795.8 bits (2054), Expect = 9.3e-227
Identity = 411/461 (89.15%), Postives = 426/461 (92.41%), Query Frame = 0


Query: 1   MDITFFTAKEAPTSFFNQSHDH-HHHHHLHHLHFSNLDMQSSTSQSSEYSPEHSPSSAAA 60
           MDITFFT KEAPTSFFNQSHDH HHHHH HHLHFSNLDMQSSTS SSEYSPEHSPS+AAA
Sbjct: 1   MDITFFTPKEAPTSFFNQSHDHRHHHHHHHHLHFSNLDMQSSTSHSSEYSPEHSPSAAAA 60

Query: 61  TA---AAGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALF 120
            A   A GKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQK+ASYFLQALF
Sbjct: 61  AATATATGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALF 120

Query: 121 CRATETGLSCYKTLVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASNGAILEALEGES 180
           CRATETGL+CYKTLVAVAEKNH+FDSALRLILKFQEASPWTTFGHVASNGAILEALEGE+
Sbjct: 121 CRATETGLTCYKTLVAVAEKNHNFDSALRLILKFQEASPWTTFGHVASNGAILEALEGET 180

Query: 181 KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVATTTIVKSLMKEIGQRMEKFARL 240
           KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVV TT+IVK LMKEIGQRMEKFARL
Sbjct: 181 KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTSIVKCLMKEIGQRMEKFARL 240

Query: 241 MGVPFEFNPITNLNHLTDLTNEALKVEEDEAIAINCIGALRRVRLEKRNNVISMLKSLKP 300
           MGVPFEFNPITN+NHLTDLTNEALKVEE EAIAINCIGALRRV++E+RNNVISMLK LKP
Sbjct: 241 MGVPFEFNPITNINHLTDLTNEALKVEEGEAIAINCIGALRRVKVEERNNVISMLKLLKP 300

Query: 301 RVLTIVEEEADLMSSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIV 360
           RVLTIVEEEAD +SS NDFLKCFEECLRFYTLYFEMLEESF ATSNERLVLERECSRSIV
Sbjct: 301 RVLTIVEEEADFISSTNDFLKCFEECLRFYTLYFEMLEESFGATSNERLVLERECSRSIV 360

Query: 361 RLLGCDE---SEEEMESERRERGKQWSKRLKEAAFSSAGFSEDVMDDVKALLKRYKPGWA 420
           RLLGCD    SEEEM SERRE+GKQW+KRLK+A FSSA FSEDVMDDVKALLKRYKPGWA
Sbjct: 361 RLLGCDHDQISEEEMGSERREKGKQWTKRLKQALFSSANFSEDVMDDVKALLKRYKPGWA 420

Query: 421 LLR-RTATDAAGEEEEGGDDSGGIYLTWKEEPVVWVSAWKP 454
           LLR  TA     EEE G  +  GIYLTWKEEPVVWVSAWKP
Sbjct: 421 LLRPATAAVGVDEEENGDAEPSGIYLTWKEEPVVWVSAWKP 461

[Close]

BLAST of Lcy05g011060 vs. ExPASy TrEMBL
Match: A0A6J1EZH2 (protein SHORT-ROOT-like OS=Cucurbita moschata OX=3662 GN=LOC111440607 PE=3 SV=1)

HSP 1 Score: 795.4 bits (2053), Expect = 1.2e-226
Identity = 403/457 (88.18%), Postives = 428/457 (93.65%), Query Frame = 0


Query: 1   MDITFFTAKEAPTSFFNQSHDHHHHHHLHHLHFSNLDMQSSTSQSSEYSPEHSPSSAAAT 60
           MDITFFTAKEAPT+FFNQSHDHH     HHLHFSNLDMQSSTS SSEYSPE SPS+AAA 
Sbjct: 1   MDITFFTAKEAPTTFFNQSHDHH-----HHLHFSNLDMQSSTSHSSEYSPEQSPSAAAAA 60

Query: 61  ----AAAGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALF 120
               AA GKW+STLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQK+ASYFLQALF
Sbjct: 61  AATLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALF 120

Query: 121 CRATETGLSCYKTLVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASNGAILEALEGES 180
           C+ATETGL+CYKTLVA+A+KNHSFDS+L+LILKFQEASPWTTFGHVASNGAILEALEGE+
Sbjct: 121 CKATETGLTCYKTLVAIADKNHSFDSSLKLILKFQEASPWTTFGHVASNGAILEALEGET 180

Query: 181 KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVATTTIVKSLMKEIGQRMEKFARL 240
           KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVV TTTIVKSLMKEIGQRMEKFARL
Sbjct: 181 KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFARL 240

Query: 241 MGVPFEFNPITNLNHLTDLTNEALKVEEDEAIAINCIGALRRVRLEKRNNVISMLKSLKP 300
           MGVPFEFNPITNL +LTDLT EALKVEEDEAIAINCIGALRRVR+E+RNNV+SMLKSLKP
Sbjct: 241 MGVPFEFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVVSMLKSLKP 300

Query: 301 RVLTIVEEEADLMSSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIV 360
           RVLTIVEEEAD +SSKN+FLKCFEECLRFYTLYF+MLEESFV TSNERLVLERECSRSIV
Sbjct: 301 RVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEESFVTTSNERLVLERECSRSIV 360

Query: 361 RLLGCDESEEEMESERRERGKQWSKRLKEAAFSSAGFSEDVMDDVKALLKRYKPGWALLR 420
           RLLGCDESEE+M SE+RE+GKQWSKRLKE+AFS A FSEDV+DDVKALLKRYKPGWALLR
Sbjct: 361 RLLGCDESEEQMGSEKREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALLR 420

Query: 421 RTATDAAGEEEEGGDDSGGIYLTWKEEPVVWVSAWKP 454
           R AT A G+  E  DDS G+YLTWKEEPVVWVSAWKP
Sbjct: 421 RAATTATGKVHERDDDSCGVYLTWKEEPVVWVSAWKP 452

[Close]

BLAST of Lcy05g011060 vs. ExPASy TrEMBL
Match: A0A6J1JX21 (protein SHORT-ROOT-like OS=Cucurbita maxima OX=3661 GN=LOC111488628 PE=3 SV=1)

HSP 1 Score: 793.5 bits (2048), Expect = 4.6e-226
Identity = 406/460 (88.26%), Postives = 429/460 (93.26%), Query Frame = 0


Query: 1   MDITFFTAKEAPTSFFNQSHDHHHHHHLHHLHFSNLDMQSSTSQSSEYSPEHSPSSAAAT 60
           MDITFFTAKEAPT+FFNQSHDHH     HHLHFSNLDMQSSTS SSEYSPE SPS+AAA 
Sbjct: 1   MDITFFTAKEAPTTFFNQSHDHH-----HHLHFSNLDMQSSTSHSSEYSPEQSPSAAAAA 60

Query: 61  AAA-----GKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQAL 120
           AAA     GKW+STLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQK+ASYFLQAL
Sbjct: 61  AAATLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQAL 120

Query: 121 FCRATETGLSCYKTLVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASNGAILEALEGE 180
           FC+ATETGL+CYKTLVA+A+KNHSFDS+L+LILKFQEASPWTTFGHVASNGAILEALEGE
Sbjct: 121 FCKATETGLTCYKTLVAIADKNHSFDSSLKLILKFQEASPWTTFGHVASNGAILEALEGE 180

Query: 181 SKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVATTTIVKSLMKEIGQRMEKFAR 240
           +KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVV TTTIVKSLMKEIGQRMEKFAR
Sbjct: 181 TKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFAR 240

Query: 241 LMGVPFEFNPITNLNHLTDLTNEALKVEEDEAIAINCIGALRRVRLEKRNNVISMLKSLK 300
           LMGVPFEFNPITNL +LTDLT EALKVEEDEAIAINCIGALRRVR+E+RNNVISMLKSLK
Sbjct: 241 LMGVPFEFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVISMLKSLK 300

Query: 301 PRVLTIVEEEADLMSSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSI 360
           PRVLTIVEEEAD +SSKN+FLKCFEECLRFYTLYF+MLE+SFV TSNERLVLERECSRSI
Sbjct: 301 PRVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEDSFVTTSNERLVLERECSRSI 360

Query: 361 VRLLGCDESEEEMESERRERGKQWSKRLKEAAFSSAGFSEDVMDDVKALLKRYKPGWALL 420
           VRLLGCDESEE+M SERRE+GKQWSKRLKE+AFS A FSEDV+DDVKALLKRYKPGWALL
Sbjct: 361 VRLLGCDESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALL 420

Query: 421 RRTAT--DAAGEEEEGGDDSGGIYLTWKEEPVVWVSAWKP 454
           RR AT   A GE  E  DDS G+YLTWKEEPVVWVSAWKP
Sbjct: 421 RRAATTATATGEVHERDDDSCGVYLTWKEEPVVWVSAWKP 455

[Close]

BLAST of Lcy05g011060 vs. ExPASy TrEMBL
Match: A0A5A7T902 (Protein SHORT-ROOT-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001130 PE=3 SV=1)

HSP 1 Score: 729.2 bits (1881), Expect = 1.1e-206
Identity = 376/423 (88.89%), Postives = 391/423 (92.43%), Query Frame = 0


Query: 38  MQSSTSQSSEYSPEHSPSSAAATA---AAGKWASTLLKECARAISEKDSNKIHHFLWMLN 97
           MQSSTS SSEYSPEHSPS+AAA A   A GKWASTLLKECARAISEKDSNKIHHFLWMLN
Sbjct: 1   MQSSTSHSSEYSPEHSPSAAAAAATATATGKWASTLLKECARAISEKDSNKIHHFLWMLN 60

Query: 98  ELASPYGDSDQKLASYFLQALFCRATETGLSCYKTLVAVAEKNHSFDSALRLILKFQEAS 157
           ELASPYGDSDQK+ASYFLQALFCRATETGL+CYKTLVAVAEKNH+FDSALRLILKFQEAS
Sbjct: 61  ELASPYGDSDQKMASYFLQALFCRATETGLTCYKTLVAVAEKNHNFDSALRLILKFQEAS 120

Query: 158 PWTTFGHVASNGAILEALEGESKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVA 217
           PWTTFGHVASNGAILEALEGE+KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVV 
Sbjct: 121 PWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVT 180

Query: 218 TTTIVKSLMKEIGQRMEKFARLMGVPFEFNPITNLNHLTDLTNEALKVEEDEAIAINCIG 277
           TT+IVK LMKEIGQRMEKFARLMGVPFEFNPITN+NHLTDLTNEALKVEE EAIAINCIG
Sbjct: 181 TTSIVKCLMKEIGQRMEKFARLMGVPFEFNPITNINHLTDLTNEALKVEEGEAIAINCIG 240

Query: 278 ALRRVRLEKRNNVISMLKSLKPRVLTIVEEEADLMSSKNDFLKCFEECLRFYTLYFEMLE 337
           ALRRV++E+RNNVISMLK LKPRVLTIVEEEAD +SS NDFLKCFEECLRFYTLYFEMLE
Sbjct: 241 ALRRVKVEERNNVISMLKLLKPRVLTIVEEEADFISSTNDFLKCFEECLRFYTLYFEMLE 300

Query: 338 ESFVATSNERLVLERECSRSIVRLLGCDE---SEEEMESERRERGKQWSKRLKEAAFSSA 397
           ESF ATSNERLVLERECSRSIVRLLGCD    SEEEM SERRE+GKQW+KRLK+A FSSA
Sbjct: 301 ESFGATSNERLVLERECSRSIVRLLGCDHDQISEEEMGSERREKGKQWTKRLKQALFSSA 360

Query: 398 GFSEDVMDDVKALLKRYKPGWALLR-RTATDAAGEEEEGGDDSGGIYLTWKEEPVVWVSA 454
            FSEDVMDDVKALLKRYKPGWALLR  TA     EEE G  +  GIYLTWKEEPVVWVSA
Sbjct: 361 NFSEDVMDDVKALLKRYKPGWALLRPATAAVGVDEEENGDAEPSGIYLTWKEEPVVWVSA 420

[Close]

BLAST of Lcy05g011060 vs. NCBI nr
Match: XP_038906992.1 (protein SHORT-ROOT-like [Benincasa hispida])

HSP 1 Score: 811.2 bits (2094), Expect = 4.4e-231
Identity = 414/456 (90.79%), Postives = 428/456 (93.86%), Query Frame = 0


Query: 1   MDITFFTAKEAPTSFFNQSHDHHHHHHLHHLHFSNLDMQSSTSQSSEYSPEHSPSSAAAT 60
           MDITFFTAKEAPTSFFNQSHD    HHLHHLHFSNLDMQSSTS SSEYSPEHSPS+AA  
Sbjct: 1   MDITFFTAKEAPTSFFNQSHD----HHLHHLHFSNLDMQSSTSHSSEYSPEHSPSAAATA 60

Query: 61  AAAGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFCRAT 120
           AA GKWASTLLKECA+AISEKDSNKIHHFLWMLNELASPYGDSDQK+ASYFLQALFCRAT
Sbjct: 61  AATGKWASTLLKECAKAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALFCRAT 120

Query: 121 ETGLSCYKTLVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASNGAILEALEGESKLHI 180
           ETGL+CYKTLVAVAEKNH+FDSALRLILKFQEASPWTTFGHVASNGAILEALEGE+KLHI
Sbjct: 121 ETGLTCYKTLVAVAEKNHNFDSALRLILKFQEASPWTTFGHVASNGAILEALEGETKLHI 180

Query: 181 IDISNTLCTQWPTLLESLATRNDDTPHLKLTVVATTTIVKSLMKEIGQRMEKFARLMGVP 240
           IDISNTLCTQWPTLLESLATRNDDTPHLKLTVV TT+IVK LMKEIGQRMEKFARLMGVP
Sbjct: 181 IDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTSIVKCLMKEIGQRMEKFARLMGVP 240

Query: 241 FEFNPITNLNHLTDLTNEALKVEEDEAIAINCIGALRRVRLEKRNNVISMLKSLKPRVLT 300
           FEFNPITNLNHLTDLTNEALKVEE EAIAINCIGALRRVR+E+RNNVISMLKSLKPRVLT
Sbjct: 241 FEFNPITNLNHLTDLTNEALKVEEGEAIAINCIGALRRVRVEERNNVISMLKSLKPRVLT 300

Query: 301 IVEEEADLMSSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLLG 360
           IVEEEAD +SSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLLG
Sbjct: 301 IVEEEADFISSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLLG 360

Query: 361 CDE---SEEEMESERRERGKQWSKRLKEAAFSSAGFSEDVMDDVKALLKRYKPGWALLRR 420
           CD    SEEEM SERRE+GKQW+KRLK+A FSSA FSEDVMDDVKALLKRYKPGWALLR 
Sbjct: 361 CDHDQISEEEMGSERREKGKQWTKRLKQALFSSADFSEDVMDDVKALLKRYKPGWALLRS 420

Query: 421 TATDAAGEEEEGGDDSGGIYLTWKEEPVVWVSAWKP 454
           TA     E+E GGDDS GIYLTWKEE VVWVSAWKP
Sbjct: 421 TAAVTGDEDESGGDDSSGIYLTWKEESVVWVSAWKP 452

[Close]

BLAST of Lcy05g011060 vs. NCBI nr
Match: XP_004153213.1 (protein SHORT-ROOT [Cucumis sativus] >KGN46310.1 hypothetical protein Csa_005353 [Cucumis sativus])

HSP 1 Score: 803.5 bits (2074), Expect = 9.3e-229
Identity = 410/459 (89.32%), Postives = 427/459 (93.03%), Query Frame = 0


Query: 1   MDITFFTAKEAPTSFFNQSHDHHHHHHLHHLHFSNLDMQSSTSQSSEYSPEHSPSSAAAT 60
           MDITFFTAKEAPTSFFNQSHDH HHH LHHLHFSNLDMQSSTS SSEYSPEHSPS+AAA 
Sbjct: 1   MDITFFTAKEAPTSFFNQSHDHRHHHQLHHLHFSNLDMQSSTSHSSEYSPEHSPSAAAAA 60

Query: 61  A---AAGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFC 120
           A   A GKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQK+A YFLQALFC
Sbjct: 61  ATATATGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMAFYFLQALFC 120

Query: 121 RATETGLSCYKTLVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASNGAILEALEGESK 180
           RATETGL+CYKTLVAVAEKNH+FDSALRLILKFQEASPWTTFGHVASNGAILEALEGE+K
Sbjct: 121 RATETGLTCYKTLVAVAEKNHNFDSALRLILKFQEASPWTTFGHVASNGAILEALEGETK 180

Query: 181 LHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVATTTIVKSLMKEIGQRMEKFARLM 240
           LHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVV TT+IVK LMKEIGQRMEKFARLM
Sbjct: 181 LHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTSIVKCLMKEIGQRMEKFARLM 240

Query: 241 GVPFEFNPITNLNHLTDLTNEALKVEEDEAIAINCIGALRRVRLEKRNNVISMLKSLKPR 300
           GVPFEFNPITN++HLTDLTNEALKVEE EAIAINCIGALRRV++E+RNNVISMLKSLKPR
Sbjct: 241 GVPFEFNPITNIDHLTDLTNEALKVEEGEAIAINCIGALRRVKVEERNNVISMLKSLKPR 300

Query: 301 VLTIVEEEADLMSSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVR 360
           VLTIVEEEAD +SSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVR
Sbjct: 301 VLTIVEEEADFISSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIVR 360

Query: 361 LLGCDE---SEEEMESERRERGKQWSKRLKEAAFSSAGFSEDVMDDVKALLKRYKPGWAL 420
           LLGCD    SEEE+ SERRE+GKQW+KRLK+A FSSA FSEDVMDDVKALLKRYKPGWAL
Sbjct: 361 LLGCDHDQISEEEIGSERREKGKQWTKRLKQALFSSANFSEDVMDDVKALLKRYKPGWAL 420

Query: 421 LRRTATDAAGEEEEGGDDSGGIYLTWKEEPVVWVSAWKP 454
           LR        EEE G  +S GIYLTWKEEPVVWVSAWKP
Sbjct: 421 LRPATAAVRDEEENGDGESSGIYLTWKEEPVVWVSAWKP 459

[Close]

BLAST of Lcy05g011060 vs. NCBI nr
Match: KAG7013919.1 (Protein SHORT-ROOT, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 796.2 bits (2055), Expect = 1.5e-226
Identity = 405/461 (87.85%), Postives = 429/461 (93.06%), Query Frame = 0


Query: 1   MDITFFTAKEAPTSFFNQSHDHHHHHHLHHLHFSNLDMQSSTSQSSEYSPEHSPSSAAAT 60
           MDITFFTAKEAPT+FFNQSHDHH     HHLHFSNLDMQSSTS SSEYSPE SPS+AAA 
Sbjct: 1   MDITFFTAKEAPTTFFNQSHDHH-----HHLHFSNLDMQSSTSHSSEYSPEQSPSAAAAA 60

Query: 61  AAA--------GKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFL 120
           AAA        GKW+STLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQK+ASYFL
Sbjct: 61  AAAAAATLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFL 120

Query: 121 QALFCRATETGLSCYKTLVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASNGAILEAL 180
           QALFC+ATETGL+CYKTLVA+A+KNHSFDS+L+LILKFQEASPWTTFGHVASNGAILEAL
Sbjct: 121 QALFCKATETGLTCYKTLVAIADKNHSFDSSLKLILKFQEASPWTTFGHVASNGAILEAL 180

Query: 181 EGESKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVATTTIVKSLMKEIGQRMEK 240
           EGE+KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVV TTTIVKSLMKEIGQRMEK
Sbjct: 181 EGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEK 240

Query: 241 FARLMGVPFEFNPITNLNHLTDLTNEALKVEEDEAIAINCIGALRRVRLEKRNNVISMLK 300
           FARLMGVPFEFNPITNL +LTDLT EALKVEEDEAIAINCIGALRRVR+E+RNNV+SMLK
Sbjct: 241 FARLMGVPFEFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVVSMLK 300

Query: 301 SLKPRVLTIVEEEADLMSSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECS 360
           SLKPRVLTIVEEEAD +SSKN+FLKCFEECLRFYTLYF+MLEESFV TSNERLVLERECS
Sbjct: 301 SLKPRVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEESFVTTSNERLVLERECS 360

Query: 361 RSIVRLLGCDESEEEMESERRERGKQWSKRLKEAAFSSAGFSEDVMDDVKALLKRYKPGW 420
           RSIVRLLGCDESEE+M SERRE+GKQWSKRLKE+AFS A FSEDV+DDVKALLKRYKPGW
Sbjct: 361 RSIVRLLGCDESEEQMGSERREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGW 420

Query: 421 ALLRRTATDAAGEEEEGGDDSGGIYLTWKEEPVVWVSAWKP 454
           ALLRR AT A GE  E  +DS G+YLTWKEEPVVWVSAWKP
Sbjct: 421 ALLRRAATTATGEVHERDNDSCGVYLTWKEEPVVWVSAWKP 456

[Close]

BLAST of Lcy05g011060 vs. NCBI nr
Match: XP_008460030.1 (PREDICTED: protein SHORT-ROOT-like [Cucumis melo])

HSP 1 Score: 795.8 bits (2054), Expect = 1.9e-226
Identity = 411/461 (89.15%), Postives = 426/461 (92.41%), Query Frame = 0


Query: 1   MDITFFTAKEAPTSFFNQSHDH-HHHHHLHHLHFSNLDMQSSTSQSSEYSPEHSPSSAAA 60
           MDITFFT KEAPTSFFNQSHDH HHHHH HHLHFSNLDMQSSTS SSEYSPEHSPS+AAA
Sbjct: 1   MDITFFTPKEAPTSFFNQSHDHRHHHHHHHHLHFSNLDMQSSTSHSSEYSPEHSPSAAAA 60

Query: 61  TA---AAGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALF 120
            A   A GKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQK+ASYFLQALF
Sbjct: 61  AATATATGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALF 120

Query: 121 CRATETGLSCYKTLVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASNGAILEALEGES 180
           CRATETGL+CYKTLVAVAEKNH+FDSALRLILKFQEASPWTTFGHVASNGAILEALEGE+
Sbjct: 121 CRATETGLTCYKTLVAVAEKNHNFDSALRLILKFQEASPWTTFGHVASNGAILEALEGET 180

Query: 181 KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVATTTIVKSLMKEIGQRMEKFARL 240
           KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVV TT+IVK LMKEIGQRMEKFARL
Sbjct: 181 KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTSIVKCLMKEIGQRMEKFARL 240

Query: 241 MGVPFEFNPITNLNHLTDLTNEALKVEEDEAIAINCIGALRRVRLEKRNNVISMLKSLKP 300
           MGVPFEFNPITN+NHLTDLTNEALKVEE EAIAINCIGALRRV++E+RNNVISMLK LKP
Sbjct: 241 MGVPFEFNPITNINHLTDLTNEALKVEEGEAIAINCIGALRRVKVEERNNVISMLKLLKP 300

Query: 301 RVLTIVEEEADLMSSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIV 360
           RVLTIVEEEAD +SS NDFLKCFEECLRFYTLYFEMLEESF ATSNERLVLERECSRSIV
Sbjct: 301 RVLTIVEEEADFISSTNDFLKCFEECLRFYTLYFEMLEESFGATSNERLVLERECSRSIV 360

Query: 361 RLLGCDE---SEEEMESERRERGKQWSKRLKEAAFSSAGFSEDVMDDVKALLKRYKPGWA 420
           RLLGCD    SEEEM SERRE+GKQW+KRLK+A FSSA FSEDVMDDVKALLKRYKPGWA
Sbjct: 361 RLLGCDHDQISEEEMGSERREKGKQWTKRLKQALFSSANFSEDVMDDVKALLKRYKPGWA 420

Query: 421 LLR-RTATDAAGEEEEGGDDSGGIYLTWKEEPVVWVSAWKP 454
           LLR  TA     EEE G  +  GIYLTWKEEPVVWVSAWKP
Sbjct: 421 LLRPATAAVGVDEEENGDAEPSGIYLTWKEEPVVWVSAWKP 461

[Close]

BLAST of Lcy05g011060 vs. NCBI nr
Match: XP_022933337.1 (protein SHORT-ROOT-like [Cucurbita moschata] >XP_022953296.1 protein SHORT-ROOT-like [Cucurbita moschata])

HSP 1 Score: 795.4 bits (2053), Expect = 2.5e-226
Identity = 403/457 (88.18%), Postives = 428/457 (93.65%), Query Frame = 0


Query: 1   MDITFFTAKEAPTSFFNQSHDHHHHHHLHHLHFSNLDMQSSTSQSSEYSPEHSPSSAAAT 60
           MDITFFTAKEAPT+FFNQSHDHH     HHLHFSNLDMQSSTS SSEYSPE SPS+AAA 
Sbjct: 1   MDITFFTAKEAPTTFFNQSHDHH-----HHLHFSNLDMQSSTSHSSEYSPEQSPSAAAAA 60

Query: 61  ----AAAGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALF 120
               AA GKW+STLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQK+ASYFLQALF
Sbjct: 61  AATLAATGKWSSTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMASYFLQALF 120

Query: 121 CRATETGLSCYKTLVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASNGAILEALEGES 180
           C+ATETGL+CYKTLVA+A+KNHSFDS+L+LILKFQEASPWTTFGHVASNGAILEALEGE+
Sbjct: 121 CKATETGLTCYKTLVAIADKNHSFDSSLKLILKFQEASPWTTFGHVASNGAILEALEGET 180

Query: 181 KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVATTTIVKSLMKEIGQRMEKFARL 240
           KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVV TTTIVKSLMKEIGQRMEKFARL
Sbjct: 181 KLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVTTTTIVKSLMKEIGQRMEKFARL 240

Query: 241 MGVPFEFNPITNLNHLTDLTNEALKVEEDEAIAINCIGALRRVRLEKRNNVISMLKSLKP 300
           MGVPFEFNPITNL +LTDLT EALKVEEDEAIAINCIGALRRVR+E+RNNV+SMLKSLKP
Sbjct: 241 MGVPFEFNPITNLENLTDLTKEALKVEEDEAIAINCIGALRRVRIEERNNVVSMLKSLKP 300

Query: 301 RVLTIVEEEADLMSSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRSIV 360
           RVLTIVEEEAD +SSKN+FLKCFEECLRFYTLYF+MLEESFV TSNERLVLERECSRSIV
Sbjct: 301 RVLTIVEEEADFISSKNNFLKCFEECLRFYTLYFDMLEESFVTTSNERLVLERECSRSIV 360

Query: 361 RLLGCDESEEEMESERRERGKQWSKRLKEAAFSSAGFSEDVMDDVKALLKRYKPGWALLR 420
           RLLGCDESEE+M SE+RE+GKQWSKRLKE+AFS A FSEDV+DDVKALLKRYKPGWALLR
Sbjct: 361 RLLGCDESEEQMGSEKREKGKQWSKRLKESAFSLAEFSEDVLDDVKALLKRYKPGWALLR 420

Query: 421 RTATDAAGEEEEGGDDSGGIYLTWKEEPVVWVSAWKP 454
           R AT A G+  E  DDS G+YLTWKEEPVVWVSAWKP
Sbjct: 421 RAATTATGKVHERDDDSCGVYLTWKEEPVVWVSAWKP 452

[Close]

BLAST of Lcy05g011060 vs. TAIR 10
Match: AT4G37650.1 (GRAS family transcription factor )

HSP 1 Score: 404.4 bits (1038), Expect = 1.2e-112
Identity = 225/492 (45.73%), Postives = 319/492 (64.84%), Query Frame = 0


Query: 5   FFTAKEAPTSFFNQSHDHHHHHHLHHLHFSNLDMQSSTSQSSEYSPEHSPSSAAAT---- 64
           FF  +E  +S  + SH +HH+H+  + ++S     +    ++  +P  + ++AA      
Sbjct: 57  FFMDEEDLSS--SSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAALASPYS 116

Query: 65  ----------------------AAAGKWASTLLKECARAISEKDSNKIHHFLWMLNELAS 124
                                 +A  KWA ++L E ARA S+KD+ +    LW LNEL+S
Sbjct: 117 SSGHHNDPSAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSS 176

Query: 125 PYGDSDQKLASYFLQALFCRATETGLSCYKTLV--AVAEKNHSFDSALRLILKFQEASPW 184
           PYGD++QKLASYFLQALF R T +G  CY+T+V  A  EK  SF+S  + +LKFQE SPW
Sbjct: 177 PYGDTEQKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPW 236

Query: 185 TTFGHVASNGAILEALEGESKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVATT 244
            TFGHVA+NGAILEA++GE+K+HI+DIS+T CTQWPTLLE+LATR+DDTPHL+LT V   
Sbjct: 237 ATFGHVAANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVA 296

Query: 245 -------TIVKSLMKEIGQRMEKFARLMGVPFEFNPITNLNHLTDLTNEALKVEEDEAIA 304
                  T    +MKEIG RMEKFARLMGVPF+FN I ++  L++     L V+ DE +A
Sbjct: 297 NKFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLA 356

Query: 305 INCIGALRRV--RLEKRNNVISMLKSLKPRVLTIVEEEADLMSSK-----NDFLKCFEEC 364
           INC+GA+  +  R   R+ VIS  + L+PR++T+VEEEADL+  +     ++FL+ F EC
Sbjct: 357 INCVGAMHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGEC 416

Query: 365 LRFYTLYFEMLEESFVATSNERLVLERECSRSIVRLLGCDESEEEMESERRERGKQWSKR 424
           LR++ + FE  EESF  TSNERL+LER   R+IV L+ C+ S+    +ERRE  ++WS+R
Sbjct: 417 LRWFRVCFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSD---STERRETARKWSRR 476

Query: 425 LKEAAFSSAGFSEDVMDDVKALLKRYKPG-WALLRRTATDAAGEEEEGGDDSGGIYLTWK 454
           ++ + F + G+S++V DDV+ALL+RYK G W++++               D+ GI+L W+
Sbjct: 477 MRNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQ-------------CPDAAGIFLCWR 530

[Close]

BLAST of Lcy05g011060 vs. TAIR 10
Match: AT3G49950.1 (GRAS family transcription factor )

HSP 1 Score: 184.9 bits (468), Expect = 1.5e-46
Identity = 125/402 (31.09%), Postives = 203/402 (50.50%), Query Frame = 0


Query: 70  LLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFCRATETGLSCYKT 129
           LL  CA AI   D+   H  LW+LN +A P GDS Q+L S FL+AL  RA     +   T
Sbjct: 30  LLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSST 89

Query: 130 LVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASNGAILEALEGESKLHIIDISNTLCT 189
           +  + + +     ++  +  F + +PW  FG +A+N AIL A+EG S +HI+D+S T C 
Sbjct: 90  ISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCM 149

Query: 190 QWPTLLESLATR-NDDTPHLKLTVVATT----TIVKSLMKEIGQRMEKFARLMGVPFEFN 249
           Q PTL++++A+R N   P LKLTVV+++      +    +E+G ++  FA    +  EF 
Sbjct: 150 QIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNITMEFT 209

Query: 250 --PITNLNHLTDLTNEALKV---EEDEAIAINCIGALRRVRLEK--------RNNVISML 309
             P T  +  + L  + L++     +EA+ +NC   LR +  E         R   +  L
Sbjct: 210 IVPSTYSDGFSSLLQQ-LRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTVFLKQL 269

Query: 310 KSLKPRVLTIVEEEADLMSSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLEREC 369
           +SL PR++T++EE+ DL S   + +   +    ++ + F+  +      S +R   E E 
Sbjct: 270 RSLNPRIVTLIEEDVDLTS--ENLVNRLKSAFNYFWIPFDTTD---TFMSEQRRWYEAEI 329

Query: 370 SRSIVRLLGCDESEEEMESERRERGKQWSKRLKEAAFSSAGFSEDVMDDVKALLKRYKPG 429
           S  I  ++  + +E     ER E  ++W +R++EA F      ED + DVKA+L+ +  G
Sbjct: 330 SWKIENVVAKEGAE---RVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVG 389

Query: 430 WALLRRTATDAAGEEEEGGDDSGGIYLTWKEEPVVWVSAWKP 454
           W + +              DD   + LTWK   VV+ + W P
Sbjct: 390 WGMKKE-------------DDDESLVLTWKGHSVVFATVWVP 409

[Close]

BLAST of Lcy05g011060 vs. TAIR 10
Match: AT2G04890.1 (SCARECROW-like 21 )

HSP 1 Score: 172.2 bits (435), Expect = 9.7e-43
Identity = 114/390 (29.23%), Postives = 198/390 (50.77%), Query Frame = 0


Query: 70  LLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKLASYFLQALFCRATETGLSCYKT 129
           +L  CA+A+SE +       +  L  + S  G+  Q+L +Y L+ L  R   +G S YK+
Sbjct: 53  VLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKS 112

Query: 130 LVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASNGAILEALEGESKLHIIDISNTLCT 189
           L +   +++ F   L  +    E  P+  FG++++NGAI EA++ E ++HIID      +
Sbjct: 113 LQSREPESYEF---LSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGS 172

Query: 190 QWPTLLESLATRNDDTPHLKLTVVATTTIVKSLMKEIGQRMEKFARLMGVPFEFNPITNL 249
           QW  L+++ A R    P++++T V   +++ ++ K    R+EK A+   VPF FN ++  
Sbjct: 173 QWIALIQAFAARPGGAPNIRITGVGDGSVLVTVKK----RLEKLAKKFDVPFRFNAVSRP 232

Query: 250 NHLTDLTNEALKVEEDEAIAINCIGALRRVRLEK------RNNVISMLKSLKPRVLTIVE 309
           +   ++ N  L V + EA+ +N    L  +  E       R+ ++ M+KSL P+V+T+VE
Sbjct: 233 SCEVEVEN--LDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVE 292

Query: 310 EEADLMSSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLEREC-SRSIVRLLGCD 369
           +E +  ++ + FL  F E L +YT  FE ++        ER+ +E+ C +R +V ++ C+
Sbjct: 293 QECN--TNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACE 352

Query: 370 ESEEEMESERRERGKQWSKRLKEAAFSSAGFSEDVMDDVKALLKRYKPGWALLRRTATDA 429
            +E     ER E   +W  R   A F     S  +   ++ALL+ Y  G+A+  R     
Sbjct: 353 GAE---RIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEER----- 412

Query: 430 AGEEEEGGDDSGGIYLTWKEEPVVWVSAWK 453
                      G +YL W +  +V   AWK
Sbjct: 413 ----------DGALYLGWMDRILVSSCAWK 413

[Close]

BLAST of Lcy05g011060 vs. TAIR 10
Match: AT5G48150.1 (GRAS family transcription factor )

HSP 1 Score: 159.5 bits (402), Expect = 6.5e-39
Identity = 116/417 (27.82%), Postives = 200/417 (47.96%), Query Frame = 0


Query: 57  AAATAAAGKWASTL-----------LKECARAISEKDSNKIHHFLWMLNELASPYGDSDQ 116
           + A+     W STL           L  CA+A+SE D    H  +  L ++ S  G+  Q
Sbjct: 98  STASQEINGWRSTLEAISRRDLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQ 157

Query: 117 KLASYFLQALFCRATETGLSCYKTLVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASN 176
           +L +Y L+ L  +   +G S YK L    E   +    L  +    E  P+  FG++++N
Sbjct: 158 RLGAYLLEGLVAQLASSGSSIYKALNRCPEP--ASTELLSYMHILYEVCPYFKFGYMSAN 217

Query: 177 GAILEALEGESKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVATTTIVKSL--- 236
           GAI EA++ E+++HIID      +QW TL+++ A R    P +++T +   T   +    
Sbjct: 218 GAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGG 277

Query: 237 MKEIGQRMEKFARLMGVPFEFNPITNLNHLTDLTNEALKVEEDEAIAINCIGALRRVRLE 296
           +  +G R+ K A+   VPFEFN ++    ++++  + L V   EA+A+N    L  +  E
Sbjct: 278 LSIVGNRLAKLAKQFNVPFEFNSVS--VSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDE 337

Query: 297 K------RNNVISMLKSLKPRVLTIVEEEADLMSSKNDFLKCFEECLRFYTLYFEMLEES 356
                  R+ ++ M+KSL P+V+T+VE+E++  ++   F   F E + +Y   FE ++ +
Sbjct: 338 SVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAA--FFPRFMETMNYYAAMFESIDVT 397

Query: 357 FVATSNERLVLEREC-SRSIVRLLGCDESEEEMESERRERGKQWSKRLKEAAFSSAGFSE 416
                 +R+ +E+ C +R +V ++ C+ ++     ER E   +W  R   A F+    S 
Sbjct: 398 LPRDHKQRINVEQHCLARDVVNIIACEGAD---RVERHELLGKWRSRFGMAGFTPYPLSP 457

Query: 417 DVMDDVKALLKRYKPGWALLRRTATDAAGEEEEGGDDSGGIYLTWKEEPVVWVSAWK 453
            V   +K+LL+ Y   + L  R                G +YL W    +V   AWK
Sbjct: 458 LVNSTIKSLLRNYSDKYRLEER---------------DGALYLGWMHRDLVASCAWK 490

[Close]

BLAST of Lcy05g011060 vs. TAIR 10
Match: AT5G48150.2 (GRAS family transcription factor )

HSP 1 Score: 159.5 bits (402), Expect = 6.5e-39
Identity = 116/417 (27.82%), Postives = 200/417 (47.96%), Query Frame = 0


Query: 57  AAATAAAGKWASTL-----------LKECARAISEKDSNKIHHFLWMLNELASPYGDSDQ 116
           + A+     W STL           L  CA+A+SE D    H  +  L ++ S  G+  Q
Sbjct: 98  STASQEINGWRSTLEAISRRDLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQ 157

Query: 117 KLASYFLQALFCRATETGLSCYKTLVAVAEKNHSFDSALRLILKFQEASPWTTFGHVASN 176
           +L +Y L+ L  +   +G S YK L    E   +    L  +    E  P+  FG++++N
Sbjct: 158 RLGAYLLEGLVAQLASSGSSIYKALNRCPEP--ASTELLSYMHILYEVCPYFKFGYMSAN 217

Query: 177 GAILEALEGESKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVATTTIVKSL--- 236
           GAI EA++ E+++HIID      +QW TL+++ A R    P +++T +   T   +    
Sbjct: 218 GAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGG 277

Query: 237 MKEIGQRMEKFARLMGVPFEFNPITNLNHLTDLTNEALKVEEDEAIAINCIGALRRVRLE 296
           +  +G R+ K A+   VPFEFN ++    ++++  + L V   EA+A+N    L  +  E
Sbjct: 278 LSIVGNRLAKLAKQFNVPFEFNSVS--VSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDE 337

Query: 297 K------RNNVISMLKSLKPRVLTIVEEEADLMSSKNDFLKCFEECLRFYTLYFEMLEES 356
                  R+ ++ M+KSL P+V+T+VE+E++  ++   F   F E + +Y   FE ++ +
Sbjct: 338 SVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAA--FFPRFMETMNYYAAMFESIDVT 397

Query: 357 FVATSNERLVLEREC-SRSIVRLLGCDESEEEMESERRERGKQWSKRLKEAAFSSAGFSE 416
                 +R+ +E+ C +R +V ++ C+ ++     ER E   +W  R   A F+    S 
Sbjct: 398 LPRDHKQRINVEQHCLARDVVNIIACEGAD---RVERHELLGKWRSRFGMAGFTPYPLSP 457

Query: 417 DVMDDVKALLKRYKPGWALLRRTATDAAGEEEEGGDDSGGIYLTWKEEPVVWVSAWK 453
            V   +K+LL+ Y   + L  R                G +YL W    +V   AWK
Sbjct: 458 LVNSTIKSLLRNYSDKYRLEER---------------DGALYLGWMHRDLVASCAWK 490

The following BLAST results are available for this feature:

BLAST of Lcy05g011060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZF7	1.6e-111	45.73	Protein SHORT-ROOT OS=Arabidopsis thaliana OX=3702 GN=SHR PE=1 SV=1	[more]
A2XIA8	6.5e-108	50.00	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica OX=39946 GN=SHR2 PE=3 SV=1	[more]
Q75I13	8.4e-108	50.00	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR2 PE=1 SV=1	[more]
A2YN56	3.2e-107	48.36	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica OX=39946 GN=SHR1 PE=3 SV=1	[more]
Q8H2X8	4.2e-107	48.36	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR1 PE=1 SV=2	[more]

BLAST of Lcy05g011060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K966	4.5e-229	89.32	GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G081510 PE=3 S...	[more]
A0A1S3CCT8	9.3e-227	89.15	protein SHORT-ROOT-like OS=Cucumis melo OX=3656 GN=LOC103498966 PE=3 SV=1	[more]
A0A6J1EZH2	1.2e-226	88.18	protein SHORT-ROOT-like OS=Cucurbita moschata OX=3662 GN=LOC111440607 PE=3 SV=1	[more]
A0A6J1JX21	4.6e-226	88.26	protein SHORT-ROOT-like OS=Cucurbita maxima OX=3661 GN=LOC111488628 PE=3 SV=1	[more]
A0A5A7T902	1.1e-206	88.89	Protein SHORT-ROOT-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lcy05g011060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906992.1	4.4e-231	90.79	protein SHORT-ROOT-like [Benincasa hispida]	[more]
XP_004153213.1	9.3e-229	89.32	protein SHORT-ROOT [Cucumis sativus] >KGN46310.1 hypothetical protein Csa_005353...	[more]
KAG7013919.1	1.5e-226	87.85	Protein SHORT-ROOT, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008460030.1	1.9e-226	89.15	PREDICTED: protein SHORT-ROOT-like [Cucumis melo]	[more]
XP_022933337.1	2.5e-226	88.18	protein SHORT-ROOT-like [Cucurbita moschata] >XP_022953296.1 protein SHORT-ROOT-...	[more]

BLAST of Lcy05g011060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37650.1	1.2e-112	45.73	GRAS family transcription factor	[more]
AT3G49950.1	1.5e-46	31.09	GRAS family transcription factor	[more]
AT2G04890.1	9.7e-43	29.23	SCARECROW-like 21	[more]
AT5G48150.1	6.5e-39	27.82	GRAS family transcription factor	[more]
AT5G48150.2	6.5e-39	27.82	GRAS family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 69..452 e-value: 5.8E-98 score: 328.3
IPR005202	Transcription factor GRAS	PANTHER	PTHR31636	OSJNBA0084A10.13 PROTEIN-RELATED	coord: 35..452
IPR005202	Transcription factor GRAS	PROSITE	PS50985	GRAS	coord: 58..452 score: 70.102104
None	No IPR available	PANTHER	PTHR31636:SF194	PROTEIN SHORT-ROOT-LIKE	coord: 35..452

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g011060.1	Lcy05g011060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding