Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTCGAAGAGGTTGCAATTTCTAGGACCATTGATAGCATAAAGTATCGGCTTGACGAAGCAAGAATTTATGGGTTGAAAGTGATATCGATGGCAAAAGGAGAAGCCGTCAACAAAACCAACGAAACAGACACAGTGACGTTTAAATTCTCATACGAGGATAAAAAGAAGAGTAATTGGACTTCCTCGATCTCGGGCAAGGTTGGTCTCAAAGTAACATTTGAAGCTGACCTTCCTATCATTAAAAACAGCAAAATTGAGGTTTCAGGTGAATATGGACATAAACGTGAATGGGGTGAAACTACTAAAAAGAAAGAAGTGATTGAAAAGAGTTACACTGTAAGTGTACCTCCAAACTCAACGGTGAAGATCAACATTACGGTAAAACAAGGAAAGTGCCAAGTTCCTTTCTCTTATCGTCGAACGGAGATTCTCACAAGTGGAAAAAGAGTTGAGCATTATTTAAATGATGGGCTTTTCACTGGTGTTAGCTCCTATGACACTGAGTTCAGTTCAGAATAAGTATCAATGGAGGACTCGTGATTGAAAGGGGGTTTCAAAGAGTGGAAATTTCACTTCTCTTTTTATGGTAATTTGCTAGCTGTGTTGTTATTGTAGAGAATAATGGTTGTTGGACCAGTTCCGGTCGTATGTTGTTTTGTTTGTTTTTTAGTTCAACCATGTGTGGAGGTAAGGATTTCGGACCTGAAATGTTGTATGTTTGTTTGGTATTTTATATCTTTTCAATTCGAGTCTAATCGTTCAGTGAAATGCAATTTGGTTGCAAAGACATTTGGA
mRNA sequence
ATGGAAGTCGAAGAGGTTGCAATTTCTAGGACCATTGATAGCATAAAGTATCGGCTTGACGAAGCAAGAATTTATGGGTTGAAAGTGATATCGATGGCAAAAGGAGAAGCCGTCAACAAAACCAACGAAACAGACACAGTGACGTTTAAATTCTCATACGAGGATAAAAAGAAGAGTAATTGGACTTCCTCGATCTCGGGCAAGGTTGGTCTCAAAGTAACATTTGAAGCTGACCTTCCTATCATTAAAAACAGCAAAATTGAGGTTTCAGGTGAATATGGACATAAACGTGAATGGGGTGAAACTACTAAAAAGAAAGAAGTGATTGAAAAGAGTTACACTGTAAGTGTACCTCCAAACTCAACGGTGAAGATCAACATTACGGTAAAACAAGGAAAGTGCCAAGTTCCTTTCTCTTATCGTCGAACGGAGATTCTCACAAGTGGAAAAAGAGTTGAGCATTATTTAAATGATGGGCTTTTCACTGGTGTTAGCTCCTATGACACTGAGTTCAGTTCAGAATAAGTATCAATGGAGGACTCGTGATTGAAAGGGGGTTTCAAAGAGTGGAAATTTCACTTCTCTTTTTATGGTAATTTGCTAGCTGTGTTGTTATTGTAGAGAATAATGGTTGTTGGACCAGTTCCGGTCGTATGTTGTTTTGTTTGTTTTTTAGTTCAACCATGTGTGGAGGTAAGGATTTCGGACCTGAAATGTTGTATGTTTGTTTGGTATTTTATATCTTTTCAATTCGAGTCTAATCGTTCAGTGAAATGCAATTTGGTTGCAAAGACATTTGGA
Coding sequence (CDS)
ATGGAAGTCGAAGAGGTTGCAATTTCTAGGACCATTGATAGCATAAAGTATCGGCTTGACGAAGCAAGAATTTATGGGTTGAAAGTGATATCGATGGCAAAAGGAGAAGCCGTCAACAAAACCAACGAAACAGACACAGTGACGTTTAAATTCTCATACGAGGATAAAAAGAAGAGTAATTGGACTTCCTCGATCTCGGGCAAGGTTGGTCTCAAAGTAACATTTGAAGCTGACCTTCCTATCATTAAAAACAGCAAAATTGAGGTTTCAGGTGAATATGGACATAAACGTGAATGGGGTGAAACTACTAAAAAGAAAGAAGTGATTGAAAAGAGTTACACTGTAAGTGTACCTCCAAACTCAACGGTGAAGATCAACATTACGGTAAAACAAGGAAAGTGCCAAGTTCCTTTCTCTTATCGTCGAACGGAGATTCTCACAAGTGGAAAAAGAGTTGAGCATTATTTAAATGATGGGCTTTTCACTGGTGTTAGCTCCTATGACACTGAGTTCAGTTCAGAATAA
Protein sequence
MEVEEVAISRTIDSIKYRLDEARIYGLKVISMAKGEAVNKTNETDTVTFKFSYEDKKKSNWTSSISGKVGLKVTFEADLPIIKNSKIEVSGEYGHKREWGETTKKKEVIEKSYTVSVPPNSTVKINITVKQGKCQVPFSYRRTEILTSGKRVEHYLNDGLFTGVSSYDTEFSSE
Homology
BLAST of Lcy05g010960 vs. ExPASy TrEMBL
Match:
A0A6J1DMW2 (uncharacterized protein LOC111022561 OS=Momordica charantia OX=3673 GN=LOC111022561 PE=4 SV=1)
HSP 1 Score: 223.4 bits (568), Expect = 7.4e-55
Identity = 107/174 (61.49%), Postives = 138/174 (79.31%), Query Frame = 0
Query: 1 MEVEEVAISRTIDSIKYRLDEARIYGLKVISMAKGEAVNKTNETDTVTFKFSYEDKKKSN 60
M VEE+ +SRTID+++YRL++ARIYG K++SMAKG+A+N T ETD VTFKFSYE+K K+N
Sbjct: 321 MVVEEIVVSRTIDNVEYRLNDARIYGQKIVSMAKGDAINTTKETDIVTFKFSYENKTKTN 380
Query: 61 WTSSISGKVGLKVTFEADLPIIKNSKIEVSGEYGHKREWGETTKKKEVIEKSYTVSVPPN 120
WTS++S +G+ F+A +PI+ KIEVS E G EWGET K K IE +Y V+VPP
Sbjct: 381 WTSTLSTNIGVTTKFQAGVPIVGKGKIEVSAEIGSGYEWGETHKHKNTIELNYPVTVPPI 440
Query: 121 STVKINITVKQGKCQVPFSYRRTEILTSGKRVEHYLNDGLFTGVSSYDTEFSSE 175
S VKIN VKQG CQVPFSYRRT++L +G+RV H+L+DGLF+GV+SYD EF S+
Sbjct: 441 SRVKINAVVKQGMCQVPFSYRRTDLLKNGRRVVHHLHDGLFSGVNSYDYEFMSK 494
BLAST of Lcy05g010960 vs. ExPASy TrEMBL
Match:
A0A6J1DUY9 (uncharacterized protein LOC111024282 OS=Momordica charantia OX=3673 GN=LOC111024282 PE=4 SV=1)
HSP 1 Score: 218.4 bits (555), Expect = 2.4e-53
Identity = 107/176 (60.80%), Postives = 138/176 (78.41%), Query Frame = 0
Query: 1 MEVEEVAISRTIDSIKYRLDEARIYGLKVISMAKGEAVNKTNETDTVTFKFSYEDKKKSN 60
++ E IS+TID+++YRL++ARIYG KV+SMAKG+AVNKT ETDTVTFKF+YE+KKK N
Sbjct: 333 LKAAEAVISKTIDNVEYRLNDARIYGQKVVSMAKGDAVNKTKETDTVTFKFTYEEKKKKN 392
Query: 61 WTSSISGKVGLKVT--FEADLPIIKNSKIEVSGEYGHKREWGETTKKKEVIEKSYTVSVP 120
W+SS+S K+G+ V+ F+ +P + KIEV E G + EWG T K K V E +Y V+VP
Sbjct: 393 WSSSVSSKIGVSVSSKFQVGIPHVGEGKIEVLAEMGAEYEWGVTHKDKNVREFTYPVTVP 452
Query: 121 PNSTVKINITVKQGKCQVPFSYRRTEILTSGKRVEHYLNDGLFTGVSSYDTEFSSE 175
P S VKIN +KQG CQVPFSYRRT++L +G++V H+LNDGLFTGV+SYD EF SE
Sbjct: 453 PMSRVKINAVIKQGICQVPFSYRRTDVLRTGRQVVHHLNDGLFTGVNSYDFEFKSE 508
BLAST of Lcy05g010960 vs. ExPASy TrEMBL
Match:
A0A6J1DTU6 (uncharacterized protein LOC111024284 OS=Momordica charantia OX=3673 GN=LOC111024284 PE=3 SV=1)
HSP 1 Score: 194.5 bits (493), Expect = 3.7e-46
Identity = 95/174 (54.60%), Postives = 130/174 (74.71%), Query Frame = 0
Query: 1 MEVEEVAISRTIDSIKYRLDEARIYGLKVISMAKGEAVNKTNETDTVTFKFSYEDKKKSN 60
MEVEE +SRTID ++Y+L++A IY KV+SMAKG+A+NKT E DTVTFKF YE K K+
Sbjct: 318 MEVEEPVVSRTIDMLRYKLNDATIYDQKVLSMAKGDAINKTKEIDTVTFKFYYEKKMKTT 377
Query: 61 WTSSISGKVGLKVTFEAD-LPIIKNSKIEVSGEYGHKREWGETTKKKEVIEKSYTVSVPP 120
W++++S K+GL F+ + +PII + IE+S E G + WG+T K K +IE +Y V+VPP
Sbjct: 378 WSATLSSKIGLTTKFKLNGIPIIGSGSIEISTELGTEYSWGKTDKHKSIIELTYPVTVPP 437
Query: 121 NSTVKINITVKQGKCQVPFSYRRTEILTSGKRVEHYLNDGLFTGVSSYDTEFSS 174
S V+I+ VKQG C+VPF+YRR ++ +G+ V Y +DGLFTGV+SYD EFSS
Sbjct: 438 MSRVEISAVVKQGMCKVPFTYRRNDVFYNGRTVTSYYSDGLFTGVNSYDYEFSS 491
BLAST of Lcy05g010960 vs. ExPASy TrEMBL
Match:
A0A6J1DYR0 (uncharacterized protein LOC111024281 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024281 PE=4 SV=1)
HSP 1 Score: 178.7 bits (452), Expect = 2.1e-41
Identity = 89/148 (60.14%), Postives = 113/148 (76.35%), Query Frame = 0
Query: 1 MEVEEVAISRTIDSIKYRLDEARIYGLKVISMAKGEAVNKTNETDTVTFKFSYEDKKKSN 60
MEV EV ISRTID+++YR+++A+IYG KV+SM KG AVNKT ETDTVTF+F YE+K K N
Sbjct: 289 MEVVEVVISRTIDNVEYRINDAQIYGQKVVSMGKGTAVNKTKETDTVTFQFKYEEKNKKN 348
Query: 61 WTSSISGKVGLKVT--FEADLPIIKNSKIEVSGEYGHKREWGETTKKKEVIEKSYTVSVP 120
W+SS+S K+G+ VT F+ +P++ KIEVS E + EWGET K K V E +Y V VP
Sbjct: 349 WSSSVSSKIGVSVTTNFQVGVPMVAKGKIEVSAEMETEYEWGETHKDKNVKEFTYPVIVP 408
Query: 121 PNSTVKINITVKQGKCQVPFSYRRTEIL 147
P S VKI+ +KQG CQVPFSYRRT++L
Sbjct: 409 PMSKVKIHALIKQGMCQVPFSYRRTDVL 436
BLAST of Lcy05g010960 vs. ExPASy TrEMBL
Match:
A0A6J1DTL3 (uncharacterized protein LOC111024281 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024281 PE=4 SV=1)
HSP 1 Score: 178.7 bits (452), Expect = 2.1e-41
Identity = 89/148 (60.14%), Postives = 113/148 (76.35%), Query Frame = 0
Query: 1 MEVEEVAISRTIDSIKYRLDEARIYGLKVISMAKGEAVNKTNETDTVTFKFSYEDKKKSN 60
MEV EV ISRTID+++YR+++A+IYG KV+SM KG AVNKT ETDTVTF+F YE+K K N
Sbjct: 299 MEVVEVVISRTIDNVEYRINDAQIYGQKVVSMGKGTAVNKTKETDTVTFQFKYEEKNKKN 358
Query: 61 WTSSISGKVGLKVT--FEADLPIIKNSKIEVSGEYGHKREWGETTKKKEVIEKSYTVSVP 120
W+SS+S K+G+ VT F+ +P++ KIEVS E + EWGET K K V E +Y V VP
Sbjct: 359 WSSSVSSKIGVSVTTNFQVGVPMVAKGKIEVSAEMETEYEWGETHKDKNVKEFTYPVIVP 418
Query: 121 PNSTVKINITVKQGKCQVPFSYRRTEIL 147
P S VKI+ +KQG CQVPFSYRRT++L
Sbjct: 419 PMSKVKIHALIKQGMCQVPFSYRRTDVL 446
BLAST of Lcy05g010960 vs. NCBI nr
Match:
XP_022155413.1 (uncharacterized protein LOC111022561 [Momordica charantia])
HSP 1 Score: 223.4 bits (568), Expect = 1.5e-54
Identity = 107/174 (61.49%), Postives = 138/174 (79.31%), Query Frame = 0
Query: 1 MEVEEVAISRTIDSIKYRLDEARIYGLKVISMAKGEAVNKTNETDTVTFKFSYEDKKKSN 60
M VEE+ +SRTID+++YRL++ARIYG K++SMAKG+A+N T ETD VTFKFSYE+K K+N
Sbjct: 321 MVVEEIVVSRTIDNVEYRLNDARIYGQKIVSMAKGDAINTTKETDIVTFKFSYENKTKTN 380
Query: 61 WTSSISGKVGLKVTFEADLPIIKNSKIEVSGEYGHKREWGETTKKKEVIEKSYTVSVPPN 120
WTS++S +G+ F+A +PI+ KIEVS E G EWGET K K IE +Y V+VPP
Sbjct: 381 WTSTLSTNIGVTTKFQAGVPIVGKGKIEVSAEIGSGYEWGETHKHKNTIELNYPVTVPPI 440
Query: 121 STVKINITVKQGKCQVPFSYRRTEILTSGKRVEHYLNDGLFTGVSSYDTEFSSE 175
S VKIN VKQG CQVPFSYRRT++L +G+RV H+L+DGLF+GV+SYD EF S+
Sbjct: 441 SRVKINAVVKQGMCQVPFSYRRTDLLKNGRRVVHHLHDGLFSGVNSYDYEFMSK 494
BLAST of Lcy05g010960 vs. NCBI nr
Match:
XP_022157622.1 (uncharacterized protein LOC111024282 [Momordica charantia])
HSP 1 Score: 218.4 bits (555), Expect = 4.9e-53
Identity = 107/176 (60.80%), Postives = 138/176 (78.41%), Query Frame = 0
Query: 1 MEVEEVAISRTIDSIKYRLDEARIYGLKVISMAKGEAVNKTNETDTVTFKFSYEDKKKSN 60
++ E IS+TID+++YRL++ARIYG KV+SMAKG+AVNKT ETDTVTFKF+YE+KKK N
Sbjct: 333 LKAAEAVISKTIDNVEYRLNDARIYGQKVVSMAKGDAVNKTKETDTVTFKFTYEEKKKKN 392
Query: 61 WTSSISGKVGLKVT--FEADLPIIKNSKIEVSGEYGHKREWGETTKKKEVIEKSYTVSVP 120
W+SS+S K+G+ V+ F+ +P + KIEV E G + EWG T K K V E +Y V+VP
Sbjct: 393 WSSSVSSKIGVSVSSKFQVGIPHVGEGKIEVLAEMGAEYEWGVTHKDKNVREFTYPVTVP 452
Query: 121 PNSTVKINITVKQGKCQVPFSYRRTEILTSGKRVEHYLNDGLFTGVSSYDTEFSSE 175
P S VKIN +KQG CQVPFSYRRT++L +G++V H+LNDGLFTGV+SYD EF SE
Sbjct: 453 PMSRVKINAVIKQGICQVPFSYRRTDVLRTGRQVVHHLNDGLFTGVNSYDFEFKSE 508
BLAST of Lcy05g010960 vs. NCBI nr
Match:
XP_022157623.1 (uncharacterized protein LOC111024284 [Momordica charantia])
HSP 1 Score: 194.5 bits (493), Expect = 7.6e-46
Identity = 95/174 (54.60%), Postives = 130/174 (74.71%), Query Frame = 0
Query: 1 MEVEEVAISRTIDSIKYRLDEARIYGLKVISMAKGEAVNKTNETDTVTFKFSYEDKKKSN 60
MEVEE +SRTID ++Y+L++A IY KV+SMAKG+A+NKT E DTVTFKF YE K K+
Sbjct: 318 MEVEEPVVSRTIDMLRYKLNDATIYDQKVLSMAKGDAINKTKEIDTVTFKFYYEKKMKTT 377
Query: 61 WTSSISGKVGLKVTFEAD-LPIIKNSKIEVSGEYGHKREWGETTKKKEVIEKSYTVSVPP 120
W++++S K+GL F+ + +PII + IE+S E G + WG+T K K +IE +Y V+VPP
Sbjct: 378 WSATLSSKIGLTTKFKLNGIPIIGSGSIEISTELGTEYSWGKTDKHKSIIELTYPVTVPP 437
Query: 121 NSTVKINITVKQGKCQVPFSYRRTEILTSGKRVEHYLNDGLFTGVSSYDTEFSS 174
S V+I+ VKQG C+VPF+YRR ++ +G+ V Y +DGLFTGV+SYD EFSS
Sbjct: 438 MSRVEISAVVKQGMCKVPFTYRRNDVFYNGRTVTSYYSDGLFTGVNSYDYEFSS 491
BLAST of Lcy05g010960 vs. NCBI nr
Match:
XP_022157620.1 (uncharacterized protein LOC111024281 isoform X1 [Momordica charantia])
HSP 1 Score: 178.7 bits (452), Expect = 4.3e-41
Identity = 89/148 (60.14%), Postives = 113/148 (76.35%), Query Frame = 0
Query: 1 MEVEEVAISRTIDSIKYRLDEARIYGLKVISMAKGEAVNKTNETDTVTFKFSYEDKKKSN 60
MEV EV ISRTID+++YR+++A+IYG KV+SM KG AVNKT ETDTVTF+F YE+K K N
Sbjct: 299 MEVVEVVISRTIDNVEYRINDAQIYGQKVVSMGKGTAVNKTKETDTVTFQFKYEEKNKKN 358
Query: 61 WTSSISGKVGLKVT--FEADLPIIKNSKIEVSGEYGHKREWGETTKKKEVIEKSYTVSVP 120
W+SS+S K+G+ VT F+ +P++ KIEVS E + EWGET K K V E +Y V VP
Sbjct: 359 WSSSVSSKIGVSVTTNFQVGVPMVAKGKIEVSAEMETEYEWGETHKDKNVKEFTYPVIVP 418
Query: 121 PNSTVKINITVKQGKCQVPFSYRRTEIL 147
P S VKI+ +KQG CQVPFSYRRT++L
Sbjct: 419 PMSKVKIHALIKQGMCQVPFSYRRTDVL 446
BLAST of Lcy05g010960 vs. NCBI nr
Match:
XP_022157621.1 (uncharacterized protein LOC111024281 isoform X2 [Momordica charantia])
HSP 1 Score: 178.7 bits (452), Expect = 4.3e-41
Identity = 89/148 (60.14%), Postives = 113/148 (76.35%), Query Frame = 0
Query: 1 MEVEEVAISRTIDSIKYRLDEARIYGLKVISMAKGEAVNKTNETDTVTFKFSYEDKKKSN 60
MEV EV ISRTID+++YR+++A+IYG KV+SM KG AVNKT ETDTVTF+F YE+K K N
Sbjct: 289 MEVVEVVISRTIDNVEYRINDAQIYGQKVVSMGKGTAVNKTKETDTVTFQFKYEEKNKKN 348
Query: 61 WTSSISGKVGLKVT--FEADLPIIKNSKIEVSGEYGHKREWGETTKKKEVIEKSYTVSVP 120
W+SS+S K+G+ VT F+ +P++ KIEVS E + EWGET K K V E +Y V VP
Sbjct: 349 WSSSVSSKIGVSVTTNFQVGVPMVAKGKIEVSAEMETEYEWGETHKDKNVKEFTYPVIVP 408
Query: 121 PNSTVKINITVKQGKCQVPFSYRRTEIL 147
P S VKI+ +KQG CQVPFSYRRT++L
Sbjct: 409 PMSKVKIHALIKQGMCQVPFSYRRTDVL 436
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DMW2 | 7.4e-55 | 61.49 | uncharacterized protein LOC111022561 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A6J1DUY9 | 2.4e-53 | 60.80 | uncharacterized protein LOC111024282 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J1DTU6 | 3.7e-46 | 54.60 | uncharacterized protein LOC111024284 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J1DYR0 | 2.1e-41 | 60.14 | uncharacterized protein LOC111024281 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1DTL3 | 2.1e-41 | 60.14 | uncharacterized protein LOC111024281 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
Match Name | E-value | Identity | Description | |
XP_022155413.1 | 1.5e-54 | 61.49 | uncharacterized protein LOC111022561 [Momordica charantia] | [more] |
XP_022157622.1 | 4.9e-53 | 60.80 | uncharacterized protein LOC111024282 [Momordica charantia] | [more] |
XP_022157623.1 | 7.6e-46 | 54.60 | uncharacterized protein LOC111024284 [Momordica charantia] | [more] |
XP_022157620.1 | 4.3e-41 | 60.14 | uncharacterized protein LOC111024281 isoform X1 [Momordica charantia] | [more] |
XP_022157621.1 | 4.3e-41 | 60.14 | uncharacterized protein LOC111024281 isoform X2 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |