Lcy05g009900 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g009900
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Location	Chr05: 10327955 .. 10331458 (+)
RNA-Seq Expression	Lcy05g009900
Synteny	Lcy05g009900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTATAAACTTTCATTCCAAGCGGAAGACTTGCGTCTTCGTGTTTATTTGTTTGTTCGATCATAGCATTTGGCGTCGGACACTTCATTTCGACTTGCTCTCTGAAGCTGGTATGGATTCAGAGGGTCCAAAAGCCCTAGATTCAGACACTCCTTCTTCATCATCTTCTTCTAACTATGGCGATTGGAAGGAACGTATCTTTTTTCCCACTCTTCTCGCAGGTCTGGATCTTCTTCCCGTGTTTCTCTCAATAACCACCTGAAAAATCATCCATTATTTATATTGTCTCTTTTCTACAGGATTTGTTGGGGGAGGAGCTGGGCTAGTGTCCAAGTATCGGAATGTTCATGGCCTCGCGAACATTTCTGCCACTTATGCTACCAATTTATCCATTGTTGCTGGTTGCTACTGCGGTAATATTTTTTCCTCAATGTTCAATTTTTTTTGCTTTTGAAAGCTTCTCGTGCAATTGGATTTGTTGGGTGTTTAATTTAATTAGGAAATTATGCAGTCTACTGCTTATCAAAGAAAAATAAGGGCGTTCACGATTAATGATGCAATGGAAATGTTTTTGGCTTGGTATTGTGGCCGTCCTTTAGGGTTTATCCTTTTTCTGATGATGGACGGCGTGGTATTCATCAGTGCTGTTCATAGTAGATCTTTGATGTGAATCTTCTTTATATCATGAATCTTAAACCTCTTGTTTCGTACGACCATCCTGACAAGAAATCCTCCAAATATGTTACTCCATGTCAATGACTTTTTCTTTTTTACTTTTCAACCATTAAGTCCCTCACGAGTGGTAGGTGCCCTATCAATTGAAACTGTGGTGAAGCCAAATCAGGGTGGCAGAGAAGAAGAGATTTGCATAATCATTGAGCTGTATTAGTCTCGGATAAGAAATGTCTTAGATGATTTATAAAACTTTCAAAATATGTTATTCATAAAGTGGAAGTTGCTTGATGAGTAAATAGAAAACTTGGGGATAAGTTTCTTTCATTTTGGAAGATGGATATGTGTGGAATATAATGAAAAGTGCGAAAAAAATACAAAATCCTGGAGGGAAGATAAAAGAACACCAATAAAACACAATAAGAGAGAATTTAAAAGAGCTCCATGAAACACAGAACATGATAACTCCAGATACAAGGAATTAAGATGAGATGAAAATTTCCCAATTAAGGCAAATGTCTTGCAAAGAGAACACTTGAAAAGATTTTGAAAGAGAACACCAACGTGAAGCTTTAAGCTTGGCCGGCTCAAAACACACCAACCAATTCCATGATTTGTCTTCAAAGATCCACTGATCCCGCTCCCCCATAATTCAGAAATAATTGCTTTAATCAACCCACAAAATAAAAGATCTTGAAGGAAGACAAGGACCAGTGAGTGAGTGGTATTACACTTGGAATCATTGTGAAAGACGGATATGTGGGGAATATATGACATTTCACCCAATTTTCTGTTCAAGTTGGAAAATGTTTTTATTTGGGATGCATGTAATAGGATTTTTGTTGTAGATTTTTGGAAATTCTAAGTTGTGGAGCTTAGTTTAGTTTTACTTAATACTTTGTTTTAGGTCTCAAGTATGGTTGATTTTTTTGTAATTATGCCAGAATTTGTGATTTCCAATCGTTAGAGTTTTGGTGAAGCTTTTTCGAGCAGCATATTGCTTTTCCAGGATTGTCCTATTTCCATAGCCACTGTTACTGAGTATTTGCTCGTGATGTTGTTTTTCTGATGGATGACTATTTCCAATAAGAAAAAAAAAAGTTTGAAAATAGTACTTCCAGAAACAATGGAAGCCTTTGTTTTCTTCTAGAAAAAAACGCTATAGGATGAAAAAATATCTAAGTTTGATAATGTTGGATGCAGAAATTATGAAAACAGTTTTTACTTTTGAGGTACGGTCAGATAGTATGAAGAGTTTTGAGAATCTTTTAATGTTCTTTTTGTATTCCCAGATTTTATTTTCTTGCACTAAACATTGTTCCTTTCTCTAGTGAAACAAGTTCAGATTTTCTTTTCTTAACTTATGTCCAAGTAAGACTACTGGTTAGAGCTGAGATCAGAATTTGAACCTTCAGTTAAGCATATTCTATTATCATGAACTACTAGTACTAGTTATTTCAAGTAAAGATTTTTGGGAATTGAGCCTCTAAGATTCAAGTTTAATCATTGTGGAACTTGATGTGATTTTGCATTTGATGGGGAATTATAAGGATCTAAGGTGGGTGTTCAATCATACACCTGCATTCTTTCACTCTTCATTGTGGATACCAAAAGTTCTTTACACAGTACTTGTTCTCATTACTACTAAATAAATTGAACAGGAGCACGTGAGTTCGTCAGAGTTTCTCGAAGGTCAGAACCTGATGACCTTATGAACTCTGCAATAGCAGGGTTTGGAACCGGAGCTCTTCTTGGACGCCTTCAAGGTTAATTTACTCCACATCCCTCACTCTCACATGTAAATTACTAAGAAGCAAGTCTGTTTTTATCTTGGACTTAGACTATTGCTTTGAGCTTGTTTCTATAATTATTGTTATAGTACTTTTGCACATCTTCATTGATAACTTGAAACTGTGGAGAGAGTTTCTGGATGAGTTATCGCATAATTATAGTTATTTTCCGTTTTTCCATTATGAATCAGTTTCCTGGACAGGAATGAGTAAGAAAAAAGGTAAAAGGATGTTATGTAACTTGGTGTTGTTGAGAATTTTTCTATGTACCTAAGTGACCAAGATTTAGAGGGAGAGCCTTGTGTAGGTTGAACTAGAACTGCTTCATAGTAATAGATTGTACAAAAACTGGTAGACATGAAATGATGCTACAAATAAATTGTGATCTGTTGCCAAAGTTCAAATAATGTGAGCCCACTGTATACAATTATATTCTCTCGGACTTGCTAGGTGGTCAGCTCGGCGCTATTCGATACTCGTTGATCTTCACCGTTGCCGGGACAGCAGTAGATTATGCCACACTGAAACTAAAACCTGCTTTCAGAAGCTACAAAGAATCGATATTTGGAGAAAGTAGTAGCTGGATGAAATTACCAGAATGGTCCCCCATCCAAGTACTTGATGAGGAGGCTTTAGCTGCCAAACAAGCTCGGGAGCAACAGCTCTACGCACAGAGGGCACTTGGGCAATTAAACAAAAAGGATCCTTGAGACATTTTTATTTTCCCCATTTATCATGGAAGAAAGGATCTGAAGTCCTGGGTTCTTTTTTCTTTTTCTTTTTTGGCTTCTTTATTTTATATACAAGTAAAGATTATAGCATATGGTGGGGACTGTGATAATAAGAAGAAAATGCTGATATTTGTCATTTTTGTTTTTCTTCTTGCAGGGCATTATATTTTTCTTGTATTGTACAAATTCTCTTTTATGATCTAAATGTTGCCCCCATTTTTTCCTGTTTAATTTTGTAATTCTATTTCATAAAATGCTATAAATGAAATGATTGATATTTGTCTCATGATCATAATAAAGTGTATGTTG

mRNA sequence

ATGCTTATAAACTTTCATTCCAAGCGGAAGACTTGCGTCTTCGTGTTTATTTGTTTGTTCGATCATAGCATTTGGCGTCGGACACTTCATTTCGACTTGCTCTCTGAAGCTGGTATGGATTCAGAGGGTCCAAAAGCCCTAGATTCAGACACTCCTTCTTCATCATCTTCTTCTAACTATGGCGATTGGAAGGAACGTATCTTTTTTCCCACTCTTCTCGCAGGATTTGTTGGGGGAGGAGCTGGGCTAGTGTCCAAGTATCGGAATGTTCATGGCCTCGCGAACATTTCTGCCACTTATGCTACCAATTTATCCATTGTTGCTGGTTGCTACTGCGGAGCACGTGAGTTCGTCAGAGTTTCTCGAAGGTCAGAACCTGATGACCTTATGAACTCTGCAATAGCAGGGTTTGGAACCGGAGCTCTTCTTGGACGCCTTCAAGGTGGTCAGCTCGGCGCTATTCGATACTCGTTGATCTTCACCGTTGCCGGGACAGCAGTAGATTATGCCACACTGAAACTAAAACCTGCTTTCAGAAGCTACAAAGAATCGATATTTGGAGAAAGTAGTAGCTGGATGAAATTACCAGAATGGTCCCCCATCCAAGTACTTGATGAGGAGGCTTTAGCTGCCAAACAAGCTCGGGAGCAACAGCTCTACGCACAGAGGGCACTTGGGCAATTAAACAAAAAGGATCCTTGAGACATTTTTATTTTCCCCATTTATCATGGAAGAAAGGATCTGAAGTCCTGGGTTCTTTTTTCTTTTTCTTTTTTGGCTTCTTTATTTTATATACAAGTAAAGATTATAGCATATGGTGGGGACTGTGATAATAAGAAGAAAATGCTGATATTTGTCATTTTTGTTTTTCTTCTTGCAGGGCATTATATTTTTCTTGTATTGTACAAATTCTCTTTTATGATCTAAATGTTGCCCCCATTTTTTCCTGTTTAATTTTGTAATTCTATTTCATAAAATGCTATAAATGAAATGATTGATATTTGTCTCATGATCATAATAAAGTGTATGTTG

Coding sequence (CDS)

ATGCTTATAAACTTTCATTCCAAGCGGAAGACTTGCGTCTTCGTGTTTATTTGTTTGTTCGATCATAGCATTTGGCGTCGGACACTTCATTTCGACTTGCTCTCTGAAGCTGGTATGGATTCAGAGGGTCCAAAAGCCCTAGATTCAGACACTCCTTCTTCATCATCTTCTTCTAACTATGGCGATTGGAAGGAACGTATCTTTTTTCCCACTCTTCTCGCAGGATTTGTTGGGGGAGGAGCTGGGCTAGTGTCCAAGTATCGGAATGTTCATGGCCTCGCGAACATTTCTGCCACTTATGCTACCAATTTATCCATTGTTGCTGGTTGCTACTGCGGAGCACGTGAGTTCGTCAGAGTTTCTCGAAGGTCAGAACCTGATGACCTTATGAACTCTGCAATAGCAGGGTTTGGAACCGGAGCTCTTCTTGGACGCCTTCAAGGTGGTCAGCTCGGCGCTATTCGATACTCGTTGATCTTCACCGTTGCCGGGACAGCAGTAGATTATGCCACACTGAAACTAAAACCTGCTTTCAGAAGCTACAAAGAATCGATATTTGGAGAAAGTAGTAGCTGGATGAAATTACCAGAATGGTCCCCCATCCAAGTACTTGATGAGGAGGCTTTAGCTGCCAAACAAGCTCGGGAGCAACAGCTCTACGCACAGAGGGCACTTGGGCAATTAAACAAAAAGGATCCTTGA

Protein sequence

MLINFHSKRKTCVFVFICLFDHSIWRRTLHFDLLSEAGMDSEGPKALDSDTPSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRALGQLNKKDP

Homology

[Close]

BLAST of Lcy05g009900 vs. ExPASy TrEMBL
Match: A0A6J1H677 (uncharacterized protein LOC111460899 OS=Cucurbita moschata OX=3662 GN=LOC111460899 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.1e-93
Identity = 179/208 (86.06%), Postives = 190/208 (91.35%), Query Frame = 0


Query: 33  LLSEAGMDSEGPKALDSDTP-------SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVS 92
           +LSEA MDS GPK LDSDTP       S SSSSNYGDWKERI FPT+LAGFVGGGAGLVS
Sbjct: 1   MLSEAAMDSGGPKTLDSDTPLSSSSSSSFSSSSNYGDWKERIIFPTILAGFVGGGAGLVS 60

Query: 93  KYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGR 152
           K+R VHGLANISATYATNLSIVA CYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGR
Sbjct: 61  KHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGR 120

Query: 153 LQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLD 212
           LQGG+LG++RYS++FTVAGTA+DYATLKLKP FRSYKE+I  ESSSWMKLPEWSPIQVLD
Sbjct: 121 LQGGRLGSVRYSIMFTVAGTAIDYATLKLKPVFRSYKETILEESSSWMKLPEWSPIQVLD 180

Query: 213 EEALAAKQAREQQLYAQRALGQLNKKDP 234
           EEALAAKQAREQQLYAQR LGQ+NKKDP
Sbjct: 181 EEALAAKQAREQQLYAQRVLGQVNKKDP 208

[Close]

BLAST of Lcy05g009900 vs. ExPASy TrEMBL
Match: A0A6J1DTZ3 (uncharacterized protein LOC111023975 OS=Momordica charantia OX=3673 GN=LOC111023975 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.6e-89
Identity = 170/199 (85.43%), Postives = 181/199 (90.95%), Query Frame = 0


Query: 39  MDSEGPKALDSDTP----SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLA 98
           MDSE PK LDS+TP    SSSSSSNYGDWK+RIFFPTLLAGFVGGGAGLVSKYR VHGLA
Sbjct: 1   MDSETPKTLDSETPSSSSSSSSSSNYGDWKQRIFFPTLLAGFVGGGAGLVSKYRKVHGLA 60

Query: 99  NISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGAI 158
           NISATYA NLSIV  CYCGAREFVRV R+SEPDDLMNSAIAGFGTGA+LGRLQGGQLG++
Sbjct: 61  NISATYAANLSIVTACYCGAREFVRVYRKSEPDDLMNSAIAGFGTGAILGRLQGGQLGSV 120

Query: 159 RYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQA 218
           RYSL+FTV GT  DYATLKL+P FRSYKES+F ES +WMKLPEWSPIQVLDEEALAAKQA
Sbjct: 121 RYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQA 180

Query: 219 REQQLYAQRALGQLNKKDP 234
           REQQLYAQR LGQLNKK+P
Sbjct: 181 REQQLYAQRTLGQLNKKEP 199

[Close]

BLAST of Lcy05g009900 vs. ExPASy TrEMBL
Match: A0A5A7SIX7 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G00420 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 1.0e-88
Identity = 171/196 (87.24%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 39  MDSEGPKALDSDTP-SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANIS 98
           MDS  PK  +SDTP SSS+SS+YG WKERIF+PTLLAG VGGGAGL+SKYR +HGLANIS
Sbjct: 1   MDSPDPKTPNSDTPFSSSTSSDYGGWKERIFYPTLLAGLVGGGAGLLSKYRKIHGLANIS 60

Query: 99  ATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGAIRYS 158
           ATYATNLSIVA CYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLG++RYS
Sbjct: 61  ATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGSVRYS 120

Query: 159 LIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQ 218
           LIFT+ GT VDYATLKLKP  RSYKESI   SSSWMKLPEWSPIQVLDEEALAAKQAREQ
Sbjct: 121 LIFTIVGTTVDYATLKLKPTLRSYKESIIEGSSSWMKLPEWSPIQVLDEEALAAKQAREQ 180

Query: 219 QLYAQRALGQLNKKDP 234
           QLYAQRALGQLNKKDP
Sbjct: 181 QLYAQRALGQLNKKDP 196

[Close]

BLAST of Lcy05g009900 vs. ExPASy TrEMBL
Match: A0A1S3C726 (uncharacterized protein LOC103497594 OS=Cucumis melo OX=3656 GN=LOC103497594 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 1.0e-88
Identity = 171/196 (87.24%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 39  MDSEGPKALDSDTP-SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANIS 98
           MDS  PK  +SDTP SSS+SS+YG WKERIF+PTLLAG VGGGAGL+SKYR +HGLANIS
Sbjct: 1   MDSPDPKTPNSDTPFSSSTSSDYGGWKERIFYPTLLAGLVGGGAGLLSKYRKIHGLANIS 60

Query: 99  ATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGAIRYS 158
           ATYATNLSIVA CYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLG++RYS
Sbjct: 61  ATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGSVRYS 120

Query: 159 LIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQ 218
           LIFT+ GT VDYATLKLKP  RSYKESI   SSSWMKLPEWSPIQVLDEEALAAKQAREQ
Sbjct: 121 LIFTIVGTTVDYATLKLKPTLRSYKESIIEGSSSWMKLPEWSPIQVLDEEALAAKQAREQ 180

Query: 219 QLYAQRALGQLNKKDP 234
           QLYAQRALGQLNKKDP
Sbjct: 181 QLYAQRALGQLNKKDP 196

[Close]

BLAST of Lcy05g009900 vs. ExPASy TrEMBL
Match: A0A0A0K6T5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G352470 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 6.8e-88
Identity = 170/197 (86.29%), Postives = 180/197 (91.37%), Query Frame = 0


Query: 39  MDSEGPKALDSDTP--SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANI 98
           MDS  PK  +SDTP  SSS+SS+YG WKERIF+PTLLAG VGGGAGL+SKYR VHGLANI
Sbjct: 1   MDSPDPKTPNSDTPPFSSSTSSDYGGWKERIFYPTLLAGIVGGGAGLLSKYRKVHGLANI 60

Query: 99  SATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGAIRY 158
           SATYATNLSIVA CYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGG+LG++RY
Sbjct: 61  SATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGRLGSVRY 120

Query: 159 SLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQARE 218
           SL+FT+ GT VDYATLKLKP  RSYKESI   SSSWMKLPEWSPIQVLDEEALAAKQARE
Sbjct: 121 SLMFTIVGTTVDYATLKLKPTLRSYKESIIEGSSSWMKLPEWSPIQVLDEEALAAKQARE 180

Query: 219 QQLYAQRALGQLNKKDP 234
           QQLYAQRALGQLNKKDP
Sbjct: 181 QQLYAQRALGQLNKKDP 197

[Close]

BLAST of Lcy05g009900 vs. NCBI nr
Match: XP_038896923.1 (uncharacterized protein LOC120085132 [Benincasa hispida])

HSP 1 Score: 361.3 bits (926), Expect = 6.3e-96
Identity = 185/199 (92.96%), Postives = 188/199 (94.47%), Query Frame = 0


Query: 39  MDSEGPKALDSDT----PSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLA 98
           MDS GPKALDSDT    PSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYR VHGLA
Sbjct: 1   MDSSGPKALDSDTPSPSPSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLA 60

Query: 99  NISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGAI 158
           NISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLG++
Sbjct: 61  NISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGSV 120

Query: 159 RYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQA 218
           RYSLIFTV GT VDYATLKLKP  RSYKESIF ESSSWMKLPEWSPI+VLDEEALAAKQA
Sbjct: 121 RYSLIFTVVGTTVDYATLKLKPVLRSYKESIFEESSSWMKLPEWSPIKVLDEEALAAKQA 180

Query: 219 REQQLYAQRALGQLNKKDP 234
           REQQLYAQRALGQLNKKDP
Sbjct: 181 REQQLYAQRALGQLNKKDP 199

[Close]

BLAST of Lcy05g009900 vs. NCBI nr
Match: KAG6593015.1 (hypothetical protein SDJN03_12491, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 354.0 bits (907), Expect = 1.0e-93
Identity = 178/206 (86.41%), Postives = 191/206 (92.72%), Query Frame = 0


Query: 33  LLSEAGMDSEGPKALDSDTP-----SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKY 92
           +LSEA MDS GPK LDSDTP     SSSSSSNYGDWKERI FPT+LAGF+GGGAGLVSK+
Sbjct: 1   MLSEAAMDSGGPKTLDSDTPLSSSSSSSSSSNYGDWKERIIFPTILAGFIGGGAGLVSKH 60

Query: 93  RNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQ 152
           R VHGLANISATYATNLSIVA CYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQ
Sbjct: 61  RKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQ 120

Query: 153 GGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEE 212
           GG+LG++RYS++FTVAGTA+DYATLKLKP FRSYKE+I  ESSSWMKLPEWSPIQVLDEE
Sbjct: 121 GGRLGSVRYSIMFTVAGTAIDYATLKLKPVFRSYKETILEESSSWMKLPEWSPIQVLDEE 180

Query: 213 ALAAKQAREQQLYAQRALGQLNKKDP 234
           ALAAKQAREQQLYAQR LGQ+N+KDP
Sbjct: 181 ALAAKQAREQQLYAQRVLGQVNEKDP 206

[Close]

BLAST of Lcy05g009900 vs. NCBI nr
Match: XP_022960027.1 (uncharacterized protein LOC111460899 [Cucurbita moschata])

HSP 1 Score: 352.8 bits (904), Expect = 2.2e-93
Identity = 179/208 (86.06%), Postives = 190/208 (91.35%), Query Frame = 0


Query: 33  LLSEAGMDSEGPKALDSDTP-------SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVS 92
           +LSEA MDS GPK LDSDTP       S SSSSNYGDWKERI FPT+LAGFVGGGAGLVS
Sbjct: 1   MLSEAAMDSGGPKTLDSDTPLSSSSSSSFSSSSNYGDWKERIIFPTILAGFVGGGAGLVS 60

Query: 93  KYRNVHGLANISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGR 152
           K+R VHGLANISATYATNLSIVA CYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGR
Sbjct: 61  KHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGR 120

Query: 153 LQGGQLGAIRYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLD 212
           LQGG+LG++RYS++FTVAGTA+DYATLKLKP FRSYKE+I  ESSSWMKLPEWSPIQVLD
Sbjct: 121 LQGGRLGSVRYSIMFTVAGTAIDYATLKLKPVFRSYKETILEESSSWMKLPEWSPIQVLD 180

Query: 213 EEALAAKQAREQQLYAQRALGQLNKKDP 234
           EEALAAKQAREQQLYAQR LGQ+NKKDP
Sbjct: 181 EEALAAKQAREQQLYAQRVLGQVNKKDP 208

[Close]

BLAST of Lcy05g009900 vs. NCBI nr
Match: XP_022157212.1 (uncharacterized protein LOC111023975 [Momordica charantia])

HSP 1 Score: 339.0 bits (868), Expect = 3.3e-89
Identity = 170/199 (85.43%), Postives = 181/199 (90.95%), Query Frame = 0


Query: 39  MDSEGPKALDSDTP----SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLA 98
           MDSE PK LDS+TP    SSSSSSNYGDWK+RIFFPTLLAGFVGGGAGLVSKYR VHGLA
Sbjct: 1   MDSETPKTLDSETPSSSSSSSSSSNYGDWKQRIFFPTLLAGFVGGGAGLVSKYRKVHGLA 60

Query: 99  NISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGAI 158
           NISATYA NLSIV  CYCGAREFVRV R+SEPDDLMNSAIAGFGTGA+LGRLQGGQLG++
Sbjct: 61  NISATYAANLSIVTACYCGAREFVRVYRKSEPDDLMNSAIAGFGTGAILGRLQGGQLGSV 120

Query: 159 RYSLIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQA 218
           RYSL+FTV GT  DYATLKL+P FRSYKES+F ES +WMKLPEWSPIQVLDEEALAAKQA
Sbjct: 121 RYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQA 180

Query: 219 REQQLYAQRALGQLNKKDP 234
           REQQLYAQR LGQLNKK+P
Sbjct: 181 REQQLYAQRTLGQLNKKEP 199

[Close]

BLAST of Lcy05g009900 vs. NCBI nr
Match: XP_008458054.1 (PREDICTED: uncharacterized protein LOC103497594 [Cucumis melo] >KAA0026138.1 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [Cucumis melo var. makuwa] >TYK11598.1 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [Cucumis melo var. makuwa])

HSP 1 Score: 336.3 bits (861), Expect = 2.2e-88
Identity = 171/196 (87.24%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 39  MDSEGPKALDSDTP-SSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANIS 98
           MDS  PK  +SDTP SSS+SS+YG WKERIF+PTLLAG VGGGAGL+SKYR +HGLANIS
Sbjct: 1   MDSPDPKTPNSDTPFSSSTSSDYGGWKERIFYPTLLAGLVGGGAGLLSKYRKIHGLANIS 60

Query: 99  ATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGAIRYS 158
           ATYATNLSIVA CYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLG++RYS
Sbjct: 61  ATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGSVRYS 120

Query: 159 LIFTVAGTAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQ 218
           LIFT+ GT VDYATLKLKP  RSYKESI   SSSWMKLPEWSPIQVLDEEALAAKQAREQ
Sbjct: 121 LIFTIVGTTVDYATLKLKPTLRSYKESIIEGSSSWMKLPEWSPIQVLDEEALAAKQAREQ 180

Query: 219 QLYAQRALGQLNKKDP 234
           QLYAQRALGQLNKKDP
Sbjct: 181 QLYAQRALGQLNKKDP 196

[Close]

BLAST of Lcy05g009900 vs. TAIR 10
Match: AT3G25120.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 196.1 bits (497), Expect = 3.2e-50
Identity = 108/187 (57.75%), Postives = 131/187 (70.05%), Query Frame = 0


Query: 45  KALDSDTPSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRNVHGLANISATYATNL 104
           +AL   TP    +   G   +R+   +LLAG +GGGAGLVSK+R  H   NI   YA N 
Sbjct: 14  QALSPPTPIVQEN---GTPTKRVLITSLLAGVIGGGAGLVSKHRIAH--PNIPTVYAANF 73

Query: 105 SIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGAIRYSLIFTVAG 164
           +IVAGCYCGARE VR++RRSE DDLMNSAI G  +GALLGRLQGG  GAIRYSL+F   G
Sbjct: 74  AIVAGCYCGARESVRITRRSEHDDLMNSAIGGLFSGALLGRLQGGPKGAIRYSLVFAAVG 133

Query: 165 TAVDYATLKLKPAFRSYKESIFGESSSWMKLPEWSPIQVLDEEALAAKQAREQQLYAQRA 224
           TA DYATLK KP   SY+      +    KLPEWSPI+VLDEEALA K+A E++++ +R 
Sbjct: 134 TAFDYATLKGKPMLESYR------NMESFKLPEWSPIKVLDEEALAKKKAHEEKIFPERV 189

Query: 225 LGQLNKK 232
           LG+LNK+
Sbjct: 194 LGKLNKE 189

The following BLAST results are available for this feature:

BLAST of Lcy05g009900 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g009900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H677	1.1e-93	86.06	uncharacterized protein LOC111460899 OS=Cucurbita moschata OX=3662 GN=LOC1114608...	[more]
A0A6J1DTZ3	1.6e-89	85.43	uncharacterized protein LOC111023975 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A5A7SIX7	1.0e-88	87.24	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
A0A1S3C726	1.0e-88	87.24	uncharacterized protein LOC103497594 OS=Cucumis melo OX=3656 GN=LOC103497594 PE=...	[more]
A0A0A0K6T5	6.8e-88	86.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G352470 PE=4 SV=1	[more]

BLAST of Lcy05g009900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896923.1	6.3e-96	92.96	uncharacterized protein LOC120085132 [Benincasa hispida]	[more]
KAG6593015.1	1.0e-93	86.41	hypothetical protein SDJN03_12491, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960027.1	2.2e-93	86.06	uncharacterized protein LOC111460899 [Cucurbita moschata]	[more]
XP_022157212.1	3.3e-89	85.43	uncharacterized protein LOC111023975 [Momordica charantia]	[more]
XP_008458054.1	2.2e-88	87.24	PREDICTED: uncharacterized protein LOC103497594 [Cucumis melo] >KAA0026138.1 mit...	[more]

BLAST of Lcy05g009900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25120.1	3.2e-50	57.75	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039175	Mitochondrial import inner membrane translocase subunit TIM22	PANTHER	PTHR14110	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22	coord: 48..232
None	No IPR available	PANTHER	PTHR14110:SF10	OSJNBB0006N15.9 PROTEIN	coord: 48..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g009900.1	Lcy05g009900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045039	protein insertion into mitochondrial inner membrane
biological_process	GO:0071806	protein transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0042721	TIM22 mitochondrial import inner membrane insertion complex
molecular_function	GO:0030943	mitochondrion targeting sequence binding
molecular_function	GO:0008320	protein transmembrane transporter activity