Lcy05g009470 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g009470
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	ribonuclease 1-like
Location	Chr05: 9818415 .. 9820232 (+)
RNA-Seq Expression	Lcy05g009470
Synteny	Lcy05g009470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATATTTGAGATATCCGACAATGACAAAGAAAGCAAGTGTGTTCCTCGTAAGCATATGGCTTCTAATAGCTTTGTCAAAACAAGCTGATTTCGACTATGTTCAGATGGTGTTGGAATGGCAGCCAGCCATGTGCAACCTTGGAAAGAGCTGCAAAATAGAACCAAAGAACAAGTTTAGTATTCATGGTGTGTGGCCTAGCCTCTACTCTAGGGGCCAAATTGGACCTTGCTATGGCCCTCCTTTTAACCCCGACAAGGTATCAAAACATTCTTTATTATTTATTTATTTATTACAATATGTGGGGTGGGAGGATTCAAACTATAGACCTTTTGATCATTAGTATAAGTTTTATGCCAGTTGAGTCAGACTCATGTTGGCTAAAACATTTATTATTATATATGTAAAAGTATTTTATATGTTTTATTTACTCTTTGTTGCTTCTTTGAACTCGGTTTAAGTTTTTGTCGCTCAAACTCGATGTGTGTTTGTCAGGGATGATGGTCTTAATAGCGATCTTATATATGAGATCATGTTGGCCAAGACATTTATTATTATATATGTAAAAGTATTTTATATTTTTATCTGATATACCACTTGTTAAGGGACAACTGGACACTCCACATATCTCCACAATAGTTCGATATTGTTCACTTTGGACATAAGCTCTCGGTTTTATTTTTGGATTACCCCAAAAGGGCTCATACCAATGGAGATACTTGTCCTTCCTTATATACCCATGATCATCCCTTTGTCTAGCCAGTGTGAGACTTTGGTCGCACTCCCAACATTGACATTGAAATAATGATAGTAAGCACAACCGTTGTTTTTTATTATTATTATTATTTTATTTTTTAATGAACATTTTGATAATAGATGAGTTGGATTTAGGGTTGAAGTCTAAGCTCTCTAACCTTTTTTTTTTCTTTTCTCAATATTTTTTTTTCATTTTTGCTTTTACAAAATGTTTTTATGGATTTTTTTTCTCTCTCTCTGTATAGTTTAATTTGTGAAATATATCTTCTTTACTAAATTTGAATTTATCGAAAATTAACAAATACAGAGCACATAACTATAGTTATTCAACTTGTAGACATTATTTATTAGTCTTATAATTTTGTTTCGAATTCCTCCTCCAATTAGATAAATATGTTTTCAAAAAAAAAAAAAAAAAAAAAAAATCAAGAAACTAAATAATTTTTTTTTAAAAAGTTTCCTCTAACATAAAATTCTTAATCCACCTGGTCGAGTTATTTAGATCATCGCATTGCAAGACCGAATGAACCAAAACTGGCCAGACCTAAAGGAAGGGAACTCATTGGAAGCGTGGAGGAGCAAATGGGCAATCCACGGGACATGCTCGGCGGCAGTGTTCAATCAGTTCGAATACTTTAGCTTGGGTTTGGACACCTACGGCCGCTACGCCATGTTGTCAATTCTAGACAAAGGAGGTGTGGCTCCTAGCTCTTACAGGTATATAGCCAAGACCCAGTTTATCGACGTCATCACCGAGTTCACGTCAAAGAAGGGCGGTGTCATTTGTGCCACCGACCACCGTGGCCGAAGACAGGTCCAGAAGGTCATTTTATGTTATGCCAAAGATGGTGCTACTCTCATCAACTGCCCAGAAAATGTTAGTAATTCCTGCCCTGAATACTTCATGTGGCTTGGCTTGGATGATTGAGTCATGTAATTGAAGCTAAAAAGATAATGAAGCTAATATGTAATATACTTTCTATCCTAATGAATAAAATTATGCTTTGATCTGCCTCATATTGCCTATGTAGCAAAATGAGGCAGAAGGGAAGCTTTGTGTTTA

mRNA sequence

CAATATTTGAGATATCCGACAATGACAAAGAAAGCAAGTGTGTTCCTCGTAAGCATATGGCTTCTAATAGCTTTGTCAAAACAAGCTGATTTCGACTATGTTCAGATGGTGTTGGAATGGCAGCCAGCCATGTGCAACCTTGGAAAGAGCTGCAAAATAGAACCAAAGAACAAGTTTAGTATTCATGGTGTGTGGCCTAGCCTCTACTCTAGGGGCCAAATTGGACCTTGCTATGGCCCTCCTTTTAACCCCGACAAGATCATCGCATTGCAAGACCGAATGAACCAAAACTGGCCAGACCTAAAGGAAGGGAACTCATTGGAAGCGTGGAGGAGCAAATGGGCAATCCACGGGACATGCTCGGCGGCAGTGTTCAATCAGTTCGAATACTTTAGCTTGGGTTTGGACACCTACGGCCGCTACGCCATGTTGTCAATTCTAGACAAAGGAGGTGTGGCTCCTAGCTCTTACAGGTATATAGCCAAGACCCAGTTTATCGACGTCATCACCGAGTTCACGTCAAAGAAGGGCGGTGTCATTTGTGCCACCGACCACCGTGGCCGAAGACAGGTCCAGAAGGTCATTTTATGTTATGCCAAAGATGGTGCTACTCTCATCAACTGCCCAGAAAATGTTAGTAATTCCTGCCCTGAATACTTCATGTGGCTTGGCTTGGATGATTGAGTCATGTAATTGAAGCTAAAAAGATAATGAAGCTAATATGTAATATACTTTCTATCCTAATGAATAAAATTATGCTTTGATCTGCCTCATATTGCCTATGTAGCAAAATGAGGCAGAAGGGAAGCTTTGTGTTTA

Coding sequence (CDS)

ATGACAAAGAAAGCAAGTGTGTTCCTCGTAAGCATATGGCTTCTAATAGCTTTGTCAAAACAAGCTGATTTCGACTATGTTCAGATGGTGTTGGAATGGCAGCCAGCCATGTGCAACCTTGGAAAGAGCTGCAAAATAGAACCAAAGAACAAGTTTAGTATTCATGGTGTGTGGCCTAGCCTCTACTCTAGGGGCCAAATTGGACCTTGCTATGGCCCTCCTTTTAACCCCGACAAGATCATCGCATTGCAAGACCGAATGAACCAAAACTGGCCAGACCTAAAGGAAGGGAACTCATTGGAAGCGTGGAGGAGCAAATGGGCAATCCACGGGACATGCTCGGCGGCAGTGTTCAATCAGTTCGAATACTTTAGCTTGGGTTTGGACACCTACGGCCGCTACGCCATGTTGTCAATTCTAGACAAAGGAGGTGTGGCTCCTAGCTCTTACAGGTATATAGCCAAGACCCAGTTTATCGACGTCATCACCGAGTTCACGTCAAAGAAGGGCGGTGTCATTTGTGCCACCGACCACCGTGGCCGAAGACAGGTCCAGAAGGTCATTTTATGTTATGCCAAAGATGGTGCTACTCTCATCAACTGCCCAGAAAATGTTAGTAATTCCTGCCCTGAATACTTCATGTGGCTTGGCTTGGATGATTGA

Protein sequence

MTKKASVFLVSIWLLIALSKQADFDYVQMVLEWQPAMCNLGKSCKIEPKNKFSIHGVWPSLYSRGQIGPCYGPPFNPDKIIALQDRMNQNWPDLKEGNSLEAWRSKWAIHGTCSAAVFNQFEYFSLGLDTYGRYAMLSILDKGGVAPSSYRYIAKTQFIDVITEFTSKKGGVICATDHRGRRQVQKVILCYAKDGATLINCPENVSNSCPEYFMWLGLDD

Homology

[Close]

BLAST of Lcy05g009470 vs. ExPASy Swiss-Prot
Match: Q7M438 (Ribonuclease DdI OS=Dictyostelium discoideum OX=44689 GN=ddiA PE=1 SV=3)

HSP 1 Score: 105.1 bits (261), Expect = 1.0e-21
Identity = 53/193 (27.46%), Postives = 94/193 (48.70%), Query Frame = 0


Query: 19  SKQADFDYVQMVLEWQPAMCNLGKSCKIEPKNKFSIHGVWPSLYSRGQIGPCYGPPFNPD 78
           SK  DFD+   V +W  + C+     + + +  F+IHG+WP          C GP FN +
Sbjct: 27  SKPGDFDFYLFVQQWIYSYCDSQTCIQNKEREAFTIHGLWPENSDGSYPSFCSGPSFNVN 86

Query: 79  KIIALQDRMNQNWPDLKEGNSLEAWRSKWAIHGTCS--AAVFNQFEYFSLGLDTYGRYAM 138
            I  L+D++N +WP L  G + + W  +++ HGTCS    + +  +YF+ G+  Y  + +
Sbjct: 87  AIQDLEDQLNFDWPSL-TGPNTDFWTHEFSKHGTCSITGPITDIHDYFATGIKLYTEFNI 146

Query: 139 LSILDKGGVAPSSYRYIAKTQFIDVITEFTSKKGGVICATDHRGRRQVQKVILCYAKDGA 198
            + L+   + PS           + IT     K G+ C++      Q+  V +C  K+  
Sbjct: 147 TAALESENIYPSDSNTYKPVDITNAITTHFGGKPGIQCSSG-----QLSTVAVCIDKNSL 206

Query: 199 TLINCPENVSNSC 210
           ++++CP+    SC
Sbjct: 207 SIMDCPDLQGWSC 213

[Close]

BLAST of Lcy05g009470 vs. ExPASy Swiss-Prot
Match: Q38717 (Ribonuclease S-4 OS=Antirrhinum hispanicum OX=49039 GN=S4 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.5e-20
Identity = 51/189 (26.98%), Postives = 94/189 (49.74%), Query Frame = 0


Query: 22  ADFDYVQMVLEWQPAMCNL-GKSCKIEP-KNKFSIHGVWPSLYSRGQIGPCYGPPFNPDK 81
           A  DY+++VL+W  + C +  + C+  P  + F+IHG+WP  Y+R     C    F    
Sbjct: 31  AKCDYLKLVLQWPKSFCLINSRKCQRNPLPSNFTIHGLWPDNYTRQAPQSCTTNNFQRFT 90

Query: 82  IIALQDRMNQNWPDLKE----GNSLEAWRSKWAIHGTCSAAVFNQFEYFSLGLDTYGRYA 141
              ++ RM ++WPDLK+    G S   W+ +W  HG+C         YF   L+   R  
Sbjct: 91  DTDIEQRMEESWPDLKQQSIAGLSYNFWQDQWRKHGSCCFPPHESEIYFLKALELKDRLD 150

Query: 142 MLSILDKGGVAPSSYRYIAKTQFIDVITEFTSKKGGVICATDHRGRRQVQKVILCYAKDG 201
           +L+IL+     P + +  +  +  + I+    K   + CA  +     +++V++C   +G
Sbjct: 151 VLTILENNNFNPGTPQPFSVLRVFNTISRAIGKTPILKCAQSY-----LKEVVICVDNNG 210

Query: 202 ATLINCPEN 205
           A++++CP +
Sbjct: 211 ASVVHCPRS 214

[Close]

BLAST of Lcy05g009470 vs. ExPASy Swiss-Prot
Match: Q7SID5 (Ribonuclease S-F11 OS=Nicotiana alata OX=4087 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-15
Identity = 48/193 (24.87%), Postives = 91/193 (47.15%), Query Frame = 0


Query: 23  DFDYVQMVLEWQPAMCNLGKSCKIEPKNKFSIHGVWPSLYSRGQIGPCYGPPFNPDKIIA 82
           DF+Y+Q+VL W  + C      +I P N F+IHG+WP    + ++  C   P        
Sbjct: 1   DFEYLQLVLTWPASFCYANHCERIAP-NNFTIHGLWPD-NVKTRLHNCKPKPTYSYFTGK 60

Query: 83  LQDRMNQNWPDLK-----EGNSLEAWRSKWAIHGTCSAAVFNQFEYFSLGLDTYGRYAML 142
           + + ++++W  LK           +W+ ++  HG+C    +NQ  YF L L    ++ +L
Sbjct: 61  MLNDLDKHWMQLKFEQDYGRTEQPSWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKFDLL 120

Query: 143 SILDKGGVAP-SSYRYIAKTQFIDVITEFTSKKGGVICATDHRGRRQVQKVILCYAKDGA 202
             L    + P SSY +       D I   + +   + CA   +G  ++ ++ +C+  +  
Sbjct: 121 RTLQTHRIIPGSSYTF---QDIFDAIKTVSQENPDIKCAEVTKGTPELYEIGICFTPNAD 180

Query: 203 TLINCPENVSNSC 210
           ++  CP+  S++C
Sbjct: 181 SMFRCPQ--SDTC 186

[Close]

BLAST of Lcy05g009470 vs. ExPASy Swiss-Prot
Match: Q7M456 (Ribonuclease Oy OS=Crassostrea gigas OX=29159 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-13
Identity = 43/134 (32.09%), Postives = 70/134 (52.24%), Query Frame = 0


Query: 23  DFDYVQMVLEWQPAMCNLGKSCKI-EPKNKFSIHGVWPSLYSRGQIGP--CYGP-PFNPD 82
           D++Y     +W  A+C   KSC I +    + IHG+WPS  +  + GP  C G  PF+ +
Sbjct: 2   DWNYFTFAQQWPIAVCAEHKSCFIPDSVVGWGIHGLWPSSDTESK-GPENCNGSWPFDIN 61

Query: 83  KIIALQDRMNQNWPDLKEGNSLEA-WRSKWAIHGTCSA---AVFNQFEYFSLGLDTYGRY 142
            ++ L   + + WP+L       + W  +W+ HGTC+    A  N+ +YF +GL  + +Y
Sbjct: 62  NVMPLVPELKKYWPNLYPDTKANSFWEHEWSKHGTCATSLPATSNELKYFGMGLKLHAKY 121

Query: 143 AMLSILDKGGVAPS 149
            +  IL   G+ PS
Sbjct: 122 NISRILVNQGILPS 134

[Close]

BLAST of Lcy05g009470 vs. ExPASy Swiss-Prot
Match: Q40379 (Ribonuclease S-6 OS=Nicotiana alata OX=4087 PE=1 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 3.8e-13
Identity = 55/207 (26.57%), Postives = 99/207 (47.83%), Query Frame = 0


Query: 6   SVFLVSIWLLIALSKQADFDYVQMVLEWQPAMCNLGKSCKIEPKNKFSIHGVWPSLYSRG 65
           SVF++ ++ L  +     F+Y+Q+VL+W  A C+    CK  P N F+IHG+WP   S  
Sbjct: 8   SVFVIFLFALSPI--YGAFEYMQLVLQWPTAFCHT-TPCKNIPSN-FTIHGLWPDNVST- 67

Query: 66  QIGPCYGPPFNPDKIIALQDRMNQN-----WPDL--KEGNSLEA---WRSKWAIHGTCSA 125
            +  C       D    + D   +N     WPDL  ++ + ++    WR ++  HGTC +
Sbjct: 68  TLNFC----GKEDDYNIIMDGPEKNGLYVRWPDLIREKADCMKTQNFWRREYIKHGTCCS 127

Query: 126 AVFNQFEYFSLGLDTYGRYAMLSILDKGGVAPSSYRYIAKTQFIDVITEFTSKKGGVICA 185
            ++NQ +YF L +    ++ +L+ L   G+    Y+Y  + +  + I   T     + C 
Sbjct: 128 EIYNQVQYFRLAMALKDKFDLLTSLKNHGII-RGYKYTVQ-KINNTIKTVTKGYPNLSCT 187

Query: 186 TDHRGRRQVQKVILCYAKDGATLINCP 203
                 +++  V +C+      +I+CP
Sbjct: 188 KG----QELWFVGICFDSTAKNVIDCP 199

[Close]

BLAST of Lcy05g009470 vs. ExPASy TrEMBL
Match: A0A0A0K4L1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G351900 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 2.1e-46
Identity = 86/134 (64.18%), Postives = 104/134 (77.61%), Query Frame = 0


Query: 87  MNQNWPDLKEGNSLEAWRSKWAIHGTCSAAVFNQFEYFSLGLDTYGRYAMLSILDKGGVA 146
           MNQ W DL+ GNS+EAW SKW +HGTCSAA F+QF+YF LGLDTYGR+A+ S LD+ G+A
Sbjct: 1   MNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQFKYFCLGLDTYGRHAIFSFLDREGLA 60

Query: 147 PSSYRYIAKTQFIDVITEFTSKKGGVICATDHRGRRQVQKVILCYAKDGATLINCPENVS 206
           PSS +Y+AK  FI  I   T KKGGVICA D   R Q+QK +LCY KDG TLI+CP+NVS
Sbjct: 61  PSSSKYVAKASFITAIANSTLKKGGVICAVDQYRRIQLQKAVLCYVKDGHTLIDCPDNVS 120

Query: 207 NSCPEYFMWLGLDD 221
           +SCP+ F+WL L D
Sbjct: 121 SSCPDNFVWLALGD 134

[Close]

BLAST of Lcy05g009470 vs. ExPASy TrEMBL
Match: A0A6J1CQQ9 (ribonuclease 1-like OS=Momordica charantia OX=3673 GN=LOC111013449 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 2.5e-44
Identity = 81/134 (60.45%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 87  MNQNWPDLKEGNSLEAWRSKWAIHGTCSAAVFNQFEYFSLGLDTYGRYAMLSILDKGGVA 146
           M + W DL  G++  AW++KWAIHGTCSA VF++F+YF +GLDTYGR+A+LS L  GG+ 
Sbjct: 1   MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLV 60

Query: 147 PSSYRYIAKTQFIDVITEFTSKKGGVICATDHRGRRQVQKVILCYAKDGATLINCPENVS 206
           PSS +   KT FI  I + TSKKGGVICA D RGR Q++ V+LCY+KDGAT+I+CP+NVS
Sbjct: 61  PSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKMVVLCYSKDGATMIDCPDNVS 120

Query: 207 NSCPEYFMWLGLDD 221
           +SCP+ F+WL L D
Sbjct: 121 SSCPDKFLWLALGD 134

[Close]

BLAST of Lcy05g009470 vs. ExPASy TrEMBL
Match: A0A6J1DYI5 (ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111025745 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 6.9e-42
Identity = 87/220 (39.55%), Postives = 124/220 (56.36%), Query Frame = 0


Query: 1   MTKKASVFLVSIWLLIALSKQADFDYVQMVLEWQPAMCN---LGKSCKIEPKNKFSIHGV 60
           M K+  +F++ + L IA S+QA FDY Q+V +WQPA CN   L   C   P N+FSIHGV
Sbjct: 1   MAKREIIFVLVLLLFIASSEQASFDYYQVVFQWQPATCNDITLPTRCVQNPDNRFSIHGV 60

Query: 61  WPSLYSRGQIGPCYGPPFNPDKIIALQDRMNQNWPDLKEGNSLEAWRSKWAIHGTCSAAV 120
           WPS  S  ++GPC G  F+P  I++++  +NQNWPD+    +   W  +W  HGTCS  +
Sbjct: 61  WPSKTSGSRVGPCNGTAFDPATIVSIRAGLNQNWPDVIRRKNQVFWSDEWRKHGTCSEDL 120

Query: 121 FNQFEYFSLGLDTYGRYA--MLSILDKGGVAPSSYRYIAKTQFIDVITEFTSKKGGVICA 180
            NQ +YF+ GL+ Y      ++  L K  + P+  +Y  K      I+    K+ G  C 
Sbjct: 121 LNQLQYFTFGLNIYHDEGKDIVEKLGKKKIIPNGKKY-KKADVEKAISSVIGKRLGFRCN 180

Query: 181 TDHRGRRQVQKVILCYAKDGATLINCPENVSNSCPEYFMW 216
            D     Q+ ++  CYAKD +TL +CP N +N CP  F W
Sbjct: 181 IDQSNYHQLHEISFCYAKDASTLQDCPSNATN-CPTKFKW 218

[Close]

BLAST of Lcy05g009470 vs. ExPASy TrEMBL
Match: A0A6J1E0X1 (ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111025395 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 2.5e-39
Identity = 88/221 (39.82%), Postives = 138/221 (62.44%), Query Frame = 0


Query: 1   MTKKASVFLVSIWLLIALSKQA-DFDYVQMVLEWQPAMCN---LGKSCKIEPKNKFSIHG 60
           M K+  + ++S++L I+ S+   +FDY Q+VL+WQPA C+   L   C   P++++S+HG
Sbjct: 1   MGKREILLVLSMFLAISSSEGVNEFDYYQVVLQWQPATCSSATLKTVCVQPPEDRYSVHG 60

Query: 61  VWPSLYSRGQIGPCYG-PPFNPDKIIALQDRMNQNWPDLKEGNSLEAWRSKWAIHGTCSA 120
           VWPSL S G +  C G PP++   I+ +Q R++Q+WP++  G + + W  +W  HGTCS+
Sbjct: 61  VWPSL-SSGYLPTCSGTPPYDARMILTIQARLDQDWPNVITGQNPQFWSYEWTKHGTCSS 120

Query: 121 AVFNQFEYFSLGLDTYGRYAMLSILDKGGVAPSSYRYIAKTQFIDVITEFTSKKGGVICA 180
           A  NQF YF+ GL  Y  Y + SIL + G+ P+  +Y  KT   + I   T K   + C 
Sbjct: 121 AYLNQFHYFNFGLWVYTNYDLQSILYQYGIYPNGQQY-TKTVVQNAIYSATGKWPALRCN 180

Query: 181 TDHR-GRRQVQKVILCYAKDGATLINCPENVSNSCPEYFMW 216
            ++R G  Q+ ++ LC++K+G  LI+CP NV  +C EYF+W
Sbjct: 181 NNYRTGNMQLHEISLCFSKNGQILIDCPFNVV-TCNEYFVW 218

[Close]

BLAST of Lcy05g009470 vs. ExPASy TrEMBL
Match: A0A6J1E266 (ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111025771 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 2.7e-38
Identity = 87/220 (39.55%), Postives = 127/220 (57.73%), Query Frame = 0


Query: 1   MTKKASVFLVSIWLLIALSKQADFDYVQMVLEWQPAMC---NLGKSCKIEPKNKFSIHGV 60
           M KK  V + S  ++IA     D++Y Q+ L+WQPA C   NL   C   P+++FSIHGV
Sbjct: 1   MEKKGIVLVFSTLVVIA---SCDYNYYQVTLQWQPATCSDANLQTPCVNTPQDRFSIHGV 60

Query: 61  WPSLYSRGQIGPCYG-PPFNPDKIIALQDRMNQNWPDLKEGNSLEAWRSKWAIHGTCSAA 120
           WP+L S G    C G P ++  KI  +++R+N +WP +  G +   W  +W  HGTCS  
Sbjct: 61  WPTL-SSGSYPQCPGTPAYDGSKISTIRNRLNADWPSVIYGTNPTLWSHEWTTHGTCSYP 120

Query: 121 VFNQFEYFSLGLDTYGRYAMLSILDKGGVAPSSYRYIAKTQFIDVITEFTSKKGGVICAT 180
             +Q +YF+ GLDTY +Y + S LDK  + PS   Y +K+   + I + T K  G+ C T
Sbjct: 121 SLSQLDYFTFGLDTYAKYDIYSALDKEDIYPSEDVY-SKSSINNAIRKITQKLPGLRCNT 180

Query: 181 -DHRGRRQVQKVILCYAKDGATLINCPENVSNSCPEYFMW 216
            D+   RQ+ ++ILC+AK    +I+CP NV  +C  Y  W
Sbjct: 181 NDYSRERQLHEIILCFAKSNRAIIDCPSNVV-TCGNYVYW 214

[Close]

BLAST of Lcy05g009470 vs. NCBI nr
Match: XP_038899255.1 (ribonuclease MC-like [Benincasa hispida])

HSP 1 Score: 346.3 bits (887), Expect = 2.0e-91
Identity = 154/220 (70.00%), Postives = 185/220 (84.09%), Query Frame = 0


Query: 1   MTKKASVFLVSIWLLIALSKQADFDYVQMVLEWQPAMCNLGKSCKIEPKNKFSIHGVWPS 60
           M KKASVFLVS++L IALSKQ  FDYVQ+V EWQPA+CNLGKSCKI+P+N+F IHGVWPS
Sbjct: 2   MRKKASVFLVSLFLSIALSKQDAFDYVQVVYEWQPAICNLGKSCKIQPENEFGIHGVWPS 61

Query: 61  LYSRGQIGPCYGPPFNPDKIIALQDRMNQNWPDLKEGNSLEAWRSKWAIHGTCSAAVFNQ 120
           +YS+GQIGPC GP F+P KI++LQDRM+Q W DL+ GN +EAW SKWAIHGTCSA VF++
Sbjct: 62  VYSKGQIGPCSGPSFDPLKIVSLQDRMSQYWQDLENGNPIEAWASKWAIHGTCSATVFDE 121

Query: 121 FEYFSLGLDTYGRYAMLSILDKGGVAPSSYRYIAKTQFIDVITEFTSKKGGVICATDHRG 180
           F+YF LGLDTYGR+AMLS L  GG+ PSS +Y+ KT F+  I + TSKKGGVICA D RG
Sbjct: 122 FKYFCLGLDTYGRHAMLSFLVHGGLVPSSSKYLDKTSFVKAIADMTSKKGGVICAVDQRG 181

Query: 181 RRQVQKVILCYAKDGATLINCPENVSNSCPEYFMWLGLDD 221
           R Q+QK +LCYAKDG TLI+CP+NVS+SCP+ F+WL L D
Sbjct: 182 RTQLQKAVLCYAKDGDTLIDCPDNVSSSCPDNFLWLALGD 221

[Close]

BLAST of Lcy05g009470 vs. NCBI nr
Match: XP_004149779.2 (ribonuclease MC [Cucumis sativus])

HSP 1 Score: 332.4 bits (851), Expect = 2.9e-87
Identity = 151/220 (68.64%), Postives = 178/220 (80.91%), Query Frame = 0


Query: 1   MTKKASVFLVSIWLLIALSKQADFDYVQMVLEWQPAMCNLGKSCKIEPKNKFSIHGVWPS 60
           M KKASVFLVS+ LLI LSKQ  FDY Q+V EWQPA+CNLG SCKI+PKN+F IHGVWPS
Sbjct: 2   MGKKASVFLVSLLLLIGLSKQDAFDYFQVVHEWQPAICNLGNSCKIQPKNEFGIHGVWPS 61

Query: 61  LYSRGQIGPCYGPPFNPDKIIALQDRMNQNWPDLKEGNSLEAWRSKWAIHGTCSAAVFNQ 120
           +YS+GQIGPC GP F+P KII+LQDRMNQ W DL+ GNS+EAW SKW +HGTCSAA F+Q
Sbjct: 62  VYSKGQIGPCCGPSFDPLKIISLQDRMNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQ 121

Query: 121 FEYFSLGLDTYGRYAMLSILDKGGVAPSSYRYIAKTQFIDVITEFTSKKGGVICATDHRG 180
           F+YF LGLDTYGR+A+ S LD+ G+APSS +Y+AK  FI  I   T KKGGVICA D   
Sbjct: 122 FKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYR 181

Query: 181 RRQVQKVILCYAKDGATLINCPENVSNSCPEYFMWLGLDD 221
           R Q+QK +LCY KDG TLI+CP+NVS+SCP+ F+WL L D
Sbjct: 182 RIQLQKAVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD 221

[Close]

BLAST of Lcy05g009470 vs. NCBI nr
Match: KGN45018.2 (hypothetical protein Csa_016393 [Cucumis sativus])

HSP 1 Score: 332.4 bits (851), Expect = 2.9e-87
Identity = 151/220 (68.64%), Postives = 178/220 (80.91%), Query Frame = 0


Query: 1   MTKKASVFLVSIWLLIALSKQADFDYVQMVLEWQPAMCNLGKSCKIEPKNKFSIHGVWPS 60
           M KKASVFLVS+ LLI LSKQ  FDY Q+V EWQPA+CNLG SCKI+PKN+F IHGVWPS
Sbjct: 1   MGKKASVFLVSLLLLIGLSKQDAFDYFQVVHEWQPAICNLGNSCKIQPKNEFGIHGVWPS 60

Query: 61  LYSRGQIGPCYGPPFNPDKIIALQDRMNQNWPDLKEGNSLEAWRSKWAIHGTCSAAVFNQ 120
           +YS+GQIGPC GP F+P KII+LQDRMNQ W DL+ GNS+EAW SKW +HGTCSAA F+Q
Sbjct: 61  VYSKGQIGPCCGPSFDPLKIISLQDRMNQYWKDLENGNSIEAWASKWEMHGTCSAAGFDQ 120

Query: 121 FEYFSLGLDTYGRYAMLSILDKGGVAPSSYRYIAKTQFIDVITEFTSKKGGVICATDHRG 180
           F+YF LGLDTYGR+A+ S LD+ G+APSS +Y+AK  FI  I   T KKGGVICA D   
Sbjct: 121 FKYFCLGLDTYGRHAIFSFLDREGLAPSSSKYVAKASFITAIANSTLKKGGVICAVDQYR 180

Query: 181 RRQVQKVILCYAKDGATLINCPENVSNSCPEYFMWLGLDD 221
           R Q+QK +LCY KDG TLI+CP+NVS+SCP+ F+WL L D
Sbjct: 181 RIQLQKAVLCYVKDGHTLIDCPDNVSSSCPDNFVWLALGD 220

[Close]

BLAST of Lcy05g009470 vs. NCBI nr
Match: XP_022143591.1 (ribonuclease 1-like [Momordica charantia])

HSP 1 Score: 188.7 bits (478), Expect = 5.2e-44
Identity = 81/134 (60.45%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 87  MNQNWPDLKEGNSLEAWRSKWAIHGTCSAAVFNQFEYFSLGLDTYGRYAMLSILDKGGVA 146
           M + W DL  G++  AW++KWAIHGTCSA VF++F+YF +GLDTYGR+A+LS L  GG+ 
Sbjct: 1   MGEYWQDLVSGDNTAAWQTKWAIHGTCSATVFDEFKYFCMGLDTYGRHAILSFLVHGGLV 60

Query: 147 PSSYRYIAKTQFIDVITEFTSKKGGVICATDHRGRRQVQKVILCYAKDGATLINCPENVS 206
           PSS +   KT FI  I + TSKKGGVICA D RGR Q++ V+LCY+KDGAT+I+CP+NVS
Sbjct: 61  PSSAQLHHKTSFIKAIADVTSKKGGVICAADQRGRTQLKMVVLCYSKDGATMIDCPDNVS 120

Query: 207 NSCPEYFMWLGLDD 221
           +SCP+ F+WL L D
Sbjct: 121 SSCPDKFLWLALGD 134

[Close]

BLAST of Lcy05g009470 vs. NCBI nr
Match: XP_022159333.1 (ribonuclease MC-like [Momordica charantia])

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-41
Identity = 87/220 (39.55%), Postives = 124/220 (56.36%), Query Frame = 0


Query: 1   MTKKASVFLVSIWLLIALSKQADFDYVQMVLEWQPAMCN---LGKSCKIEPKNKFSIHGV 60
           M K+  +F++ + L IA S+QA FDY Q+V +WQPA CN   L   C   P N+FSIHGV
Sbjct: 1   MAKREIIFVLVLLLFIASSEQASFDYYQVVFQWQPATCNDITLPTRCVQNPDNRFSIHGV 60

Query: 61  WPSLYSRGQIGPCYGPPFNPDKIIALQDRMNQNWPDLKEGNSLEAWRSKWAIHGTCSAAV 120
           WPS  S  ++GPC G  F+P  I++++  +NQNWPD+    +   W  +W  HGTCS  +
Sbjct: 61  WPSKTSGSRVGPCNGTAFDPATIVSIRAGLNQNWPDVIRRKNQVFWSDEWRKHGTCSEDL 120

Query: 121 FNQFEYFSLGLDTYGRYA--MLSILDKGGVAPSSYRYIAKTQFIDVITEFTSKKGGVICA 180
            NQ +YF+ GL+ Y      ++  L K  + P+  +Y  K      I+    K+ G  C 
Sbjct: 121 LNQLQYFTFGLNIYHDEGKDIVEKLGKKKIIPNGKKY-KKADVEKAISSVIGKRLGFRCN 180

Query: 181 TDHRGRRQVQKVILCYAKDGATLINCPENVSNSCPEYFMW 216
            D     Q+ ++  CYAKD +TL +CP N +N CP  F W
Sbjct: 181 IDQSNYHQLHEISFCYAKDASTLQDCPSNATN-CPTKFKW 218

The following BLAST results are available for this feature:

BLAST of Lcy05g009470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7M438	1.0e-21	27.46	Ribonuclease DdI OS=Dictyostelium discoideum OX=44689 GN=ddiA PE=1 SV=3	[more]
Q38717	5.5e-20	26.98	Ribonuclease S-4 OS=Antirrhinum hispanicum OX=49039 GN=S4 PE=2 SV=1	[more]
Q7SID5	2.4e-15	24.87	Ribonuclease S-F11 OS=Nicotiana alata OX=4087 PE=1 SV=1	[more]
Q7M456	1.7e-13	32.09	Ribonuclease Oy OS=Crassostrea gigas OX=29159 PE=1 SV=1	[more]
Q40379	3.8e-13	26.57	Ribonuclease S-6 OS=Nicotiana alata OX=4087 PE=1 SV=2	[more]

BLAST of Lcy05g009470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4L1	2.1e-46	64.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G351900 PE=3 SV=1	[more]
A0A6J1CQQ9	2.5e-44	60.45	ribonuclease 1-like OS=Momordica charantia OX=3673 GN=LOC111013449 PE=3 SV=1	[more]
A0A6J1DYI5	6.9e-42	39.55	ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111025745 PE=3 SV=1	[more]
A0A6J1E0X1	2.5e-39	39.82	ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111025395 PE=3 SV=1	[more]
A0A6J1E266	2.7e-38	39.55	ribonuclease MC-like OS=Momordica charantia OX=3673 GN=LOC111025771 PE=3 SV=1	[more]

BLAST of Lcy05g009470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899255.1	2.0e-91	70.00	ribonuclease MC-like [Benincasa hispida]	[more]
XP_004149779.2	2.9e-87	68.64	ribonuclease MC [Cucumis sativus]	[more]
KGN45018.2	2.9e-87	68.64	hypothetical protein Csa_016393 [Cucumis sativus]	[more]
XP_022143591.1	5.2e-44	60.45	ribonuclease 1-like [Momordica charantia]	[more]
XP_022159333.1	1.4e-41	39.55	ribonuclease MC-like [Momordica charantia]	[more]

BLAST of Lcy05g009470 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 18..216 e-value: 3.2E-45 score: 156.7
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 23..215
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 24..201 e-value: 3.4E-30 score: 105.6
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 20..211
None	No IPR available	PANTHER	PTHR11240:SF51	RIBONUCLEASE 2	coord: 20..211
None	No IPR available	CDD	cd00374	RNase_T2	coord: 24..210 e-value: 2.23699E-44 score: 145.291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g009470.1	Lcy05g009470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0016070	RNA metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding