Homology
BLAST of Lcy05g009400 vs. ExPASy Swiss-Prot
Match:
Q9M316 (Pentatricopeptide repeat-containing protein At3g61520, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g61520 PE=2 SV=1)
HSP 1 Score: 589.3 bits (1518), Expect = 4.9e-167
Identity = 301/601 (50.08%), Postives = 422/601 (70.22%), Query Frame = 0
Query: 11 LLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLPGS 70
LL+R GR GMV++++ + +L+SN KN+ VRNV++D+LL++G VD+A VLDEML S
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKES 216
Query: 71 EFRPNDITADIVFTKLLKINGSEGR-VKEDEIAGLVAKFGKHHLAPNPITLTQLISKLCR 130
F PN ITADIV ++ K GR + E++I L+++F H ++PN + LT+ IS LC+
Sbjct: 217 VFPPNRITADIVLHEVWK-----GRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCK 276
Query: 131 SRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVIT 190
+ + AW++L DLM +A P NALL+ LG+ D +MN L+ KM ++ I+P+V+T
Sbjct: 277 NARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVT 336
Query: 191 FGILINHLCKFRRIDDALEVFEKMKGEK-EDAKVVAPDAITYNTLIDGLCKVGRQEEGLR 250
GILIN LCK RR+D+ALEVFEKM+G++ +D V+ D+I +NTLIDGLCKVGR +E
Sbjct: 337 LGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEE 396
Query: 251 LMGMMR-SDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGM 310
L+ M+ + CAPN VTYNCLIDG+C+AG++E A E+ ++M +++ PNV+T+N++V GM
Sbjct: 397 LLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGM 456
Query: 311 CKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDA 370
C+H ++ AV FF +M+++G+KGN VTY I+A C V+N++KAM +++++ +AGC PDA
Sbjct: 457 CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 516
Query: 371 IVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNE 430
+YY LI GL Q R DA VV KLKE GF LDL+ YN+LI FC +N +K E+L +
Sbjct: 517 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTD 576
Query: 431 MELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNN 490
ME G KPDS+TYNTLIS+F K +F+ + M++M +E+GL PTV TYGA+I AYC
Sbjct: 577 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVG 636
Query: 491 NTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTY 550
D A+KLFK+M SKV P TVIYNILI++ K ALSL ++M+++ V+PN TY
Sbjct: 637 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 696
Query: 551 NAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKKFTQGYKV 609
NA+ K L EK + +LMD MVEQ+C + ITMEIL E LS E KL+KF QGY V
Sbjct: 697 NALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSV 751
BLAST of Lcy05g009400 vs. ExPASy Swiss-Prot
Match:
Q9LKU8 (Pentatricopeptide repeat-containing protein At5g28460 OS=Arabidopsis thaliana OX=3702 GN=At5g28460 PE=2 SV=1)
HSP 1 Score: 587.4 bits (1513), Expect = 1.8e-166
Identity = 298/600 (49.67%), Postives = 420/600 (70.00%), Query Frame = 0
Query: 11 LLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLPGS 70
LL+R GR GMV++++ + +L+SN KN+ VRNV++D+LL++G VD+A VLDEML S
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKES 216
Query: 71 EFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITLTQLISKLCRS 130
F PN ITADIV ++ K E + E++I L+++F H ++PN + LT+ IS LC++
Sbjct: 217 VFPPNRITADIVLHEVWK----ERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKN 276
Query: 131 RNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVITF 190
+ AW++L DLM +A P NALL+ LG+ D +MN L+ KM ++ I+P+V+T
Sbjct: 277 ARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTL 336
Query: 191 GILINHLCKFRRIDDALEVFEKMKGEK-EDAKVVAPDAITYNTLIDGLCKVGRQEEGLRL 250
GILIN LCK RR+D+ALEVFE+M+G++ +D V+ D+I +NTLIDGLCKVGR +E L
Sbjct: 337 GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 396
Query: 251 MGMMR-SDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGMC 310
+ M+ + C PN VTYNCLIDG+C+AG++E A E+ ++M +++ PNV+T+N++V GMC
Sbjct: 397 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 456
Query: 311 KHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDAI 370
+H ++ AV FF +M+++G+KGN VTY I+A C V+N++KAM +++++ +AGC PDA
Sbjct: 457 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 516
Query: 371 VYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNEM 430
+YY LI GL Q R DA VV KLKE GF LDL+ YN+LI FC +N +K E+L +M
Sbjct: 517 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 576
Query: 431 ELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNNN 490
E G KPDS+TYNTLIS+F K +F+ + M++M +E+GL PTV TYGA+I AYC
Sbjct: 577 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVGE 636
Query: 491 TDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTYN 550
D A+KLFK+M SKV P TVIYNILI++ K ALSL ++M+++ V+PN TYN
Sbjct: 637 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 696
Query: 551 AILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKKFTQGYKVS 609
A+ K L EK + +LMD MVEQ+C + ITMEIL E LS E KL+KF QGY V+
Sbjct: 697 ALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSVA 751
BLAST of Lcy05g009400 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 271.9 bits (694), Expect = 1.7e-71
Identity = 168/564 (29.79%), Postives = 279/564 (49.47%), Query Frame = 0
Query: 12 LLRRLGRAGMVDEALAAFSKLESN--AKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLPG 71
+L RLGR+G D+ ++S+ T ++I+ + D L+V+D M+
Sbjct: 89 ILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMI--- 148
Query: 72 SEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITLTQLISKLCR 131
EF T + ++L + +K EI+ AK + P+ T LI LCR
Sbjct: 149 DEFGLKPDTH--FYNRMLNLLVDGNSLKLVEISH--AKMSVWGIKPDVSTFNVLIKALCR 208
Query: 132 SRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVIT 191
+ A +L+D+ + + D ++ G +E D + + +M + + ++
Sbjct: 209 AHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVS 268
Query: 192 FGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKVGRQEEGLRL 251
++++ CK R++DAL ++M + PD T+NTL++GLCK G + + +
Sbjct: 269 VNVIVHGFCKEGRVEDALNFIQEMSNQDG----FFPDQYTFNTLVNGLCKAGHVKHAIEI 328
Query: 252 MGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGMCK 311
M +M +G P+ TYN +I G CK GE++ A E+ +QM+ PN +T N+L+ +CK
Sbjct: 329 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 388
Query: 312 HGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDAIV 371
++ A E R + KG+ + T+ I C N AME F+E+ GC PD
Sbjct: 389 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 448
Query: 372 YYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNEME 431
Y LI L G+LD+A ++ +++ +G ++ YN LI FCK NK +A E+ +EME
Sbjct: 449 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 508
Query: 432 LVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNNNT 491
+ GV +SVTYNTLI K + A + M +M EG P +TY +L+ +C +
Sbjct: 509 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM-EGQKPDKYTYNSLLTHFCRGGDI 568
Query: 492 DGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTYNA 551
A + + M++ P I V Y LI LCK +V A LL ++++G+ YN
Sbjct: 569 KKAADIVQAMTSNGCEPDI-VTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNP 628
Query: 552 ILKALREKNWLDKAFELMDRMVEQ 574
+++ L K +A L M+EQ
Sbjct: 629 VIQGLFRKRKTTEAINLFREMLEQ 639
BLAST of Lcy05g009400 vs. ExPASy Swiss-Prot
Match:
Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)
HSP 1 Score: 259.6 bits (662), Expect = 8.8e-68
Identity = 160/546 (29.30%), Postives = 270/546 (49.45%), Query Frame = 0
Query: 43 NVIIDLLLKSGRVDNALNVLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIA 102
NV++++L+ A NV +ML + P T +V +N + D
Sbjct: 186 NVVLEILVSGNCHKVAANVFYDML--SRKIPPTLFTFGVVMKAFCAVN------EIDSAL 245
Query: 103 GLVAKFGKHHLAPNPITLTQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGL 162
L+ KH PN + LI L + + A +L+++ + + DA N ++ GL
Sbjct: 246 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 305
Query: 163 GKERDFEKMNLLMRKMKDMDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKV 222
K + ++ +M P+ IT+G L+N LCK R+D A ++F ++
Sbjct: 306 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF---------YRI 365
Query: 223 VAPDAITYNTLIDGLCKVGRQEEGLRLMG-MMRSDGCAPNTVTYNCLIDGHCKAGEIERA 282
P+ + +NTLI G GR ++ ++ M+ S G P+ TYN LI G+ K G + A
Sbjct: 366 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 425
Query: 283 HELFNQMVNEQVVPNVITLNSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINA 342
E+ + M N+ PNV + LVDG CK G+I A EM GLK N+V + I+A
Sbjct: 426 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 485
Query: 343 FCKVNNIDKAMEFFDEISKAGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLD 402
FCK + I +A+E F E+ + GC PD + +LI GL + + A +++ + G + +
Sbjct: 486 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 545
Query: 403 LVCYNLLISEFCKRNKLDKANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMK 462
V YN LI+ F +R ++ +A +L+NEM G D +TYN+LI + G A +
Sbjct: 546 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 605
Query: 463 KMTKEEGLLPTVHTYGALIHAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCK 522
KM + +G P+ + LI+ C + + A++ KEM P I V +N LI+ LC+
Sbjct: 606 KMLR-DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI-VTFNSLINGLCR 665
Query: 523 KNKVNFALSLLDDMRVRGVKPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYIT 582
++ L++ ++ G+ P+T T+N ++ L + ++ A L+D +E ++ T
Sbjct: 666 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 712
Query: 583 MEILTE 588
IL +
Sbjct: 726 WSILLQ 712
BLAST of Lcy05g009400 vs. ExPASy Swiss-Prot
Match:
Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)
HSP 1 Score: 255.4 bits (651), Expect = 1.7e-66
Identity = 157/488 (32.17%), Postives = 243/488 (49.80%), Query Frame = 0
Query: 103 GLVAKFGKHHLAPNPITLTQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGL 162
G + K G PN IT + LI+ LC A ++D ++ D N L+ GL
Sbjct: 147 GKIIKLG---YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL 206
Query: 163 GKERDFEKMNLLMRKMKDMDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKV 222
+ LL+ KM + QPN +T+G ++N +CK + A+E+ KM E+ + K+
Sbjct: 207 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM--EERNIKL 266
Query: 223 VAPDAITYNTLIDGLCKVGRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAH 282
DA+ Y+ +IDGLCK G + L M G N +TYN LI G C AG +
Sbjct: 267 ---DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 326
Query: 283 ELFNQMVNEQVVPNVITLNSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAF 342
+L M+ ++ PNV+T + L+D K G++ A E +EM +G+ +++TYT I+ F
Sbjct: 327 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 386
Query: 343 CKVNNIDKAMEFFDEISKAGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDL 402
CK N++DKA + D + GC P+ + LI G +A R+DD + K+ G + D
Sbjct: 387 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 446
Query: 403 VCYNLLISEFCKRNKLDKANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKK 462
V YN LI FC+ KL+ A EL EM V P+ VTY L+ G + A + +K
Sbjct: 447 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 506
Query: 463 MTKEEGLLPTVHTYGALIHAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKK 522
+ K + L + Y +IH C + D A LF + V P YNI+I LCKK
Sbjct: 507 IEKSKMEL-DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG-VKPGVKTYNIMIGGLCKK 566
Query: 523 NKVNFALSLLDDMRVRGVKPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITM 582
++ A L M G P+ TYN +++A K+ +L++ + + D T+
Sbjct: 567 GPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTI 624
Query: 583 EILTEWLS 591
+++ + LS
Sbjct: 627 KMVIDMLS 624
BLAST of Lcy05g009400 vs. ExPASy TrEMBL
Match:
A0A6J1D191 (pentatricopeptide repeat-containing protein At5g28460 OS=Momordica charantia OX=3673 GN=LOC111016427 PE=4 SV=1)
HSP 1 Score: 1094.3 bits (2829), Expect = 0.0e+00
Identity = 543/604 (89.90%), Postives = 572/604 (94.70%), Query Frame = 0
Query: 9 AVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLP 68
AVLLLRRLGRAGM DEALA FS+L+S+ KNTYVRNVIIDLLLK+GRVD+A+ VLDEMLLP
Sbjct: 161 AVLLLRRLGRAGMADEALAVFSELDSHTKNTYVRNVIIDLLLKTGRVDSAMKVLDEMLLP 220
Query: 69 GSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITLTQLISKLC 128
GSEFRPNDITADIVFTKLLK+NG EGRV+EDEIAGLVAKFGKHH+ PN ITLTQLIS+LC
Sbjct: 221 GSEFRPNDITADIVFTKLLKVNGWEGRVREDEIAGLVAKFGKHHVFPNAITLTQLISRLC 280
Query: 129 RSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVI 188
RSRNTDLAWNVLDD+M NGLKD APCNALLTGLGKER+FEKMNLLMR+MKDMDIQPNVI
Sbjct: 281 RSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLMRRMKDMDIQPNVI 340
Query: 189 TFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKVGRQEEGLR 248
TFGILINHLCKFRRIDDALEVFE+MKGEKE AKVVAPDAITYNTLIDGLCKVGRQEEG
Sbjct: 341 TFGILINHLCKFRRIDDALEVFERMKGEKE-AKVVAPDAITYNTLIDGLCKVGRQEEGSS 400
Query: 249 LMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGMC 308
LM MMRSDGC PNTVTYNCLIDG+CK+GEIE+AHELFNQM NEQVVPNVITLN+LVDGMC
Sbjct: 401 LMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVPNVITLNTLVDGMC 460
Query: 309 KHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDAI 368
KHGRISSAVEF REMQQKGLKGNSVTYTVFINAFCK NNIDKAMEFFDE+ KAGCFPD+I
Sbjct: 461 KHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKXNNIDKAMEFFDEMFKAGCFPDSI 520
Query: 369 VYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNEM 428
VYYTLICGLAQAGRLDDASFV+SKLKEAGF LDLVC+N+LISEFCKRNKLDKANELLNEM
Sbjct: 521 VYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKRNKLDKANELLNEM 580
Query: 429 ELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNNN 488
ELVGVKPDSVTYNTLISYFS+ GNFKLAHKFMK+MTK EGLLPTV TYGALIHAYCLNNN
Sbjct: 581 ELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFTYGALIHAYCLNNN 640
Query: 489 TDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTYN 548
TD AMKLFKEMSA SKVPP TVIYNILIDSLCKKN+VN ALSL DDM+VRGVKPNTTTYN
Sbjct: 641 TDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVNSALSLFDDMKVRGVKPNTTTYN 700
Query: 549 AILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKKFTQGYKVS 608
A+ KAL EKNWLDKAFELMDRMVEQACNADYITMEILTEWLS+VGETTKLKKFTQGYKVS
Sbjct: 701 AVFKALWEKNWLDKAFELMDRMVEQACNADYITMEILTEWLSSVGETTKLKKFTQGYKVS 760
Query: 609 DSAA 613
S A
Sbjct: 761 TSPA 763
BLAST of Lcy05g009400 vs. ExPASy TrEMBL
Match:
A0A6J1H7V3 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111460949 PE=4 SV=1)
HSP 1 Score: 1071.6 bits (2770), Expect = 1.1e-309
Identity = 526/612 (85.95%), Postives = 573/612 (93.63%), Query Frame = 0
Query: 1 MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALN 60
M+HS Q+AV LLRRLGR+GMVDEALA F++L+ + KNTYVRNVIIDLLLKSGRVDNALN
Sbjct: 1 MAHSTTQNAVNLLRRLGRSGMVDEALAVFTELDPHKKNTYVRNVIIDLLLKSGRVDNALN 60
Query: 61 VLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITL 120
VLDEMLLPGSEFRPNDITADIVFTKLLKINGS+ RVKE+EIAGLVAKFGKHH+ PNPITL
Sbjct: 61 VLDEMLLPGSEFRPNDITADIVFTKLLKINGSDWRVKENEIAGLVAKFGKHHVVPNPITL 120
Query: 121 TQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKD 180
TQLISKLCRSRN DLAW+VLDDLM WNGLKDAAPCNALLTGLGKER+FEKMNLLMRKMKD
Sbjct: 121 TQLISKLCRSRNIDLAWSVLDDLMTWNGLKDAAPCNALLTGLGKEREFEKMNLLMRKMKD 180
Query: 181 MDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKV 240
M++QPNVITFGILINH+CKFR IDDALEVFEKMKGEKE+AK VAPDAITYNTLIDGLCKV
Sbjct: 181 MNVQPNVITFGILINHMCKFRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLIDGLCKV 240
Query: 241 GRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITL 300
GRQEEGLRL+G MRSDGC PNTVTYNCLIDG+CKAG IE AH L+++MVNEQVVPNVITL
Sbjct: 241 GRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGAIETAHALYDEMVNEQVVPNVITL 300
Query: 301 NSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISK 360
N+LVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFFDE+SK
Sbjct: 301 NTLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFFDEMSK 360
Query: 361 AGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDK 420
AGCFPDAIVYYTLICGLAQAGRLDDA+ V ++K AGF LDLVCYNLLISEFCK+NKLD+
Sbjct: 361 AGCFPDAIVYYTLICGLAQAGRLDDATSVALRMKAAGFRLDLVCYNLLISEFCKKNKLDE 420
Query: 421 ANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALI 480
ANELL+EME+VG+KPDSVTYNTLISYFSK+GN +LA KFM+KMTKE LLP+V TYGA+I
Sbjct: 421 ANELLDEMEVVGIKPDSVTYNTLISYFSKMGNLELALKFMEKMTKEACLLPSVFTYGAVI 480
Query: 481 HAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGV 540
HAYCL NNTD AMKLFKEM+ATSKVPP TVIYNILIDSLCK+N+V+ AL+L DDM V GV
Sbjct: 481 HAYCLTNNTDEAMKLFKEMTATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDMNVNGV 540
Query: 541 KPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKK 600
KPNTTTYNAILK L+EK WL+KA E+MDRMVEQACNADYITMEILTEWLS+VGET KLK+
Sbjct: 541 KPNTTTYNAILKGLKEKKWLEKALEVMDRMVEQACNADYITMEILTEWLSSVGETAKLKR 600
Query: 601 FTQGYKVSDSAA 613
FTQGYKVSD AA
Sbjct: 601 FTQGYKVSDFAA 612
BLAST of Lcy05g009400 vs. ExPASy TrEMBL
Match:
A0A6J1KTL0 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111498105 PE=4 SV=1)
HSP 1 Score: 1060.8 bits (2742), Expect = 2.1e-306
Identity = 523/612 (85.46%), Postives = 569/612 (92.97%), Query Frame = 0
Query: 1 MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALN 60
M+HS AQ+AV LLRRLGR+GMVDEALA FS+L+ + KNTYVRNVIIDLLLKSGRVDNALN
Sbjct: 1 MAHSTAQNAVNLLRRLGRSGMVDEALAVFSELDPHKKNTYVRNVIIDLLLKSGRVDNALN 60
Query: 61 VLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITL 120
VLDEMLLPGSEFRPNDITADIVFTKLLKINGS+ RVKE++IAGLVAKFGKH + PNPITL
Sbjct: 61 VLDEMLLPGSEFRPNDITADIVFTKLLKINGSDWRVKENKIAGLVAKFGKHRVVPNPITL 120
Query: 121 TQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKD 180
TQLISKLCRSRN DLAW+VLDDLM WNGLKDAAPCNALLTGLGKE +FEKMNLLMRKMKD
Sbjct: 121 TQLISKLCRSRNIDLAWSVLDDLMTWNGLKDAAPCNALLTGLGKEMEFEKMNLLMRKMKD 180
Query: 181 MDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKV 240
M++QPNVITF ILINH+CKFR IDDALEVFEKMKGEKE+AK VAPDAITYNTLIDGLCKV
Sbjct: 181 MNVQPNVITFSILINHMCKFRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLIDGLCKV 240
Query: 241 GRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITL 300
GRQEEGLRL+G MRSDGC PNTVTYNCLIDG+CKAG IE AH L+N+MVNEQVVPNVITL
Sbjct: 241 GRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGTIETAHALYNEMVNEQVVPNVITL 300
Query: 301 NSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISK 360
N+LVDGMCKHGRISSAVEFF EMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFFDE+SK
Sbjct: 301 NTLVDGMCKHGRISSAVEFFMEMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFFDEMSK 360
Query: 361 AGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDK 420
AGCFPDAIVYY LI GLAQAGRLDDA+ V S++K AGF LDLVCYNLLISEFCK+NKLD+
Sbjct: 361 AGCFPDAIVYYPLIFGLAQAGRLDDATSVASRMKAAGFRLDLVCYNLLISEFCKKNKLDE 420
Query: 421 ANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALI 480
ANELL+EME+VG+KPD VTYNTLISYFSK+GN +LA KFM+KMTKE LLP+V TYGA+I
Sbjct: 421 ANELLDEMEVVGIKPDIVTYNTLISYFSKMGNLELALKFMEKMTKEACLLPSVFTYGAVI 480
Query: 481 HAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGV 540
HAYCLNNNTD AMKLFKEMSATSKVPP TVIYNILIDSLCK+N+V+ AL+L DDM V GV
Sbjct: 481 HAYCLNNNTDEAMKLFKEMSATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDMNVNGV 540
Query: 541 KPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKK 600
KPNTTTYNAILK L+EK W++KA E+MDRMVEQACNADYITMEILTEWLS+VGET KLK+
Sbjct: 541 KPNTTTYNAILKGLKEKKWMEKALEVMDRMVEQACNADYITMEILTEWLSSVGETAKLKR 600
Query: 601 FTQGYKVSDSAA 613
FTQGYKVSD AA
Sbjct: 601 FTQGYKVSDFAA 612
BLAST of Lcy05g009400 vs. ExPASy TrEMBL
Match:
A0A1S3BGI7 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103489753 PE=4 SV=1)
HSP 1 Score: 1006.1 bits (2600), Expect = 6.2e-290
Identity = 503/613 (82.06%), Postives = 556/613 (90.70%), Query Frame = 0
Query: 1 MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALN 60
MS S AQ AV LLR LGR GMVDEALAAFS L+S+AKNT VRN II+LLLKSGRVDNALN
Sbjct: 1 MSLSTAQSAVHLLRHLGRVGMVDEALAAFSTLDSHAKNTNVRNEIINLLLKSGRVDNALN 60
Query: 61 VLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITL 120
VL EMLLP SEFRPND TA IVF K+LKI+GSEGR KEDEIAGLV+KFGK+++ P+ I L
Sbjct: 61 VLYEMLLPESEFRPNDKTAGIVFNKMLKIDGSEGRAKEDEIAGLVSKFGKYNIFPDTIAL 120
Query: 121 TQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKD 180
TQLISKLCRS NT+LAWN+LD++MM NGLKDAAPCNALLTGLGK R+F KMNLLMRKMKD
Sbjct: 121 TQLISKLCRSGNTNLAWNILDNMMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKD 180
Query: 181 MDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAK-VVAPDAITYNTLIDGLCK 240
M+IQP VITFGILIN+LCKFRRIDDALEVFEKMKGEKE+A+ VVAPD I YNTLIDGLCK
Sbjct: 181 MNIQPTVITFGILINYLCKFRRIDDALEVFEKMKGEKEEAEVVVAPDTIMYNTLIDGLCK 240
Query: 241 VGRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVIT 300
VGRQEEGLRLMG MRS CAP T TYNCLI+G+C+AGEIE A++LF++MV+EQ+ PNVIT
Sbjct: 241 VGRQEEGLRLMGTMRSGQCAPTTATYNCLINGYCRAGEIEVANKLFSEMVSEQIEPNVIT 300
Query: 301 LNSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEIS 360
LN+LVDGMCKH RIS+AV+FFR+MQQKGLKGN+VTYTVFINAFC VNN++KAMEF DE+S
Sbjct: 301 LNTLVDGMCKHNRISTAVKFFRDMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMS 360
Query: 361 KAGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLD 420
K GCFPDA+VYYTLICGLA+AGRLDD+S VVSKLKEAGF LD VCYN+LISEFCK+NKLD
Sbjct: 361 KDGCFPDAVVYYTLICGLARAGRLDDSSSVVSKLKEAGFFLDRVCYNVLISEFCKKNKLD 420
Query: 421 KANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGAL 480
+A E LN+MEL GVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMT+E+GL PTV TYGAL
Sbjct: 421 RAQEWLNQMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEDGLSPTVFTYGAL 480
Query: 481 IHAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRG 540
IHAYCLNNN D A+KLFKEM+ SKVPP TVIYNILIDSLCK+ +VNFALSLLDDM+ RG
Sbjct: 481 IHAYCLNNNIDEAIKLFKEMNVASKVPPNTVIYNILIDSLCKQTEVNFALSLLDDMKFRG 540
Query: 541 VKPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLK 600
V PNTTTYN+I KALRE NWLDKAF+LMDRMVEQACNADYITMEILTEWLS+VGETTKLK
Sbjct: 541 VMPNTTTYNSIFKALRENNWLDKAFKLMDRMVEQACNADYITMEILTEWLSSVGETTKLK 600
Query: 601 KFTQGYKVSDSAA 613
KFTQG VSDSAA
Sbjct: 601 KFTQGCMVSDSAA 613
BLAST of Lcy05g009400 vs. ExPASy TrEMBL
Match:
A0A5D3DT18 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00300 PE=4 SV=1)
HSP 1 Score: 1006.1 bits (2600), Expect = 6.2e-290
Identity = 503/613 (82.06%), Postives = 556/613 (90.70%), Query Frame = 0
Query: 1 MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALN 60
MS S AQ AV LLR LGR GMVDEALAAFS L+S+AKNT VRN II+LLLKSGRVDNALN
Sbjct: 1 MSLSTAQSAVHLLRHLGRVGMVDEALAAFSTLDSHAKNTNVRNEIINLLLKSGRVDNALN 60
Query: 61 VLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITL 120
VL EMLLP SEFRPND TA IVF K+LKI+GSEGR KEDEIAGLV+KFGK+++ P+ I L
Sbjct: 61 VLYEMLLPESEFRPNDKTAGIVFNKMLKIDGSEGRAKEDEIAGLVSKFGKYNIFPDTIAL 120
Query: 121 TQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKD 180
TQLISKLCRS NT+LAWN+LD++MM NGLKDAAPCNALLTGLGK R+F KMNLLMRKMKD
Sbjct: 121 TQLISKLCRSGNTNLAWNILDNMMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKD 180
Query: 181 MDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAK-VVAPDAITYNTLIDGLCK 240
M+IQP VITFGILIN+LCKFRRIDDALEVFEKMKGEKE+A+ VVAPD I YNTLIDGLCK
Sbjct: 181 MNIQPTVITFGILINYLCKFRRIDDALEVFEKMKGEKEEAEVVVAPDTIMYNTLIDGLCK 240
Query: 241 VGRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVIT 300
VGRQEEGLRLMG MRS CAP T TYNCLI+G+C+AGEIE A++LF++MV+EQ+ PNVIT
Sbjct: 241 VGRQEEGLRLMGTMRSGQCAPTTATYNCLINGYCRAGEIEVANKLFSEMVSEQIEPNVIT 300
Query: 301 LNSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEIS 360
LN+LVDGMCKH RIS+AV+FFR+MQQKGLKGN+VTYTVFINAFC VNN++KAMEF DE+S
Sbjct: 301 LNTLVDGMCKHNRISTAVKFFRDMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMS 360
Query: 361 KAGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLD 420
K GCFPDA+VYYTLICGLA+AGRLDD+S VVSKLKEAGF LD VCYN+LISEFCK+NKLD
Sbjct: 361 KDGCFPDAVVYYTLICGLARAGRLDDSSSVVSKLKEAGFFLDRVCYNVLISEFCKKNKLD 420
Query: 421 KANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGAL 480
+A E LN+MEL GVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMT+E+GL PTV TYGAL
Sbjct: 421 RAQEWLNQMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEDGLSPTVFTYGAL 480
Query: 481 IHAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRG 540
IHAYCLNNN D A+KLFKEM+ SKVPP TVIYNILIDSLCK+ +VNFALSLLDDM+ RG
Sbjct: 481 IHAYCLNNNIDEAIKLFKEMNVASKVPPNTVIYNILIDSLCKQTEVNFALSLLDDMKFRG 540
Query: 541 VKPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLK 600
V PNTTTYN+I KALRE NWLDKAF+LMDRMVEQACNADYITMEILTEWLS+VGETTKLK
Sbjct: 541 VMPNTTTYNSIFKALRENNWLDKAFKLMDRMVEQACNADYITMEILTEWLSSVGETTKLK 600
Query: 601 KFTQGYKVSDSAA 613
KFTQG VSDSAA
Sbjct: 601 KFTQGCMVSDSAA 613
BLAST of Lcy05g009400 vs. NCBI nr
Match:
XP_022147524.1 (pentatricopeptide repeat-containing protein At5g28460 [Momordica charantia])
HSP 1 Score: 1093.6 bits (2827), Expect = 0.0e+00
Identity = 542/604 (89.74%), Postives = 572/604 (94.70%), Query Frame = 0
Query: 9 AVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLP 68
AVLLLRRLGRAGM +EALA FS+L+S+ KNTYVRNVIIDLLLK+GRVD+A+ VLDEMLLP
Sbjct: 161 AVLLLRRLGRAGMABEALAVFSELDSHTKNTYVRNVIIDLLLKTGRVDSAMKVLDEMLLP 220
Query: 69 GSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITLTQLISKLC 128
GSEFRPNDITADIVFTKLLK+NG EGRV+EDEIAGLVAKFGKHH+ PN ITLTQLIS+LC
Sbjct: 221 GSEFRPNDITADIVFTKLLKVNGWEGRVREDEIAGLVAKFGKHHVFPNAITLTQLISRLC 280
Query: 129 RSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVI 188
RSRNTDLAWNVLDD+M NGLKD APCNALLTGLGKER+FEKMNLLMR+MKDMDIQPNVI
Sbjct: 281 RSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLMRRMKDMDIQPNVI 340
Query: 189 TFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKVGRQEEGLR 248
TFGILINHLCKFRRIDDALEVFE+MKGEKE AKVVAPDAITYNTLIDGLCKVGRQEEG
Sbjct: 341 TFGILINHLCKFRRIDDALEVFERMKGEKE-AKVVAPDAITYNTLIDGLCKVGRQEEGSS 400
Query: 249 LMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGMC 308
LM MMRSDGC PNTVTYNCLIDG+CK+GEIE+AHELFNQM NEQVVPNVITLN+LVDGMC
Sbjct: 401 LMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVPNVITLNTLVDGMC 460
Query: 309 KHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDAI 368
KHGRISSAVEF REMQQKGLKGNSVTYTVFINAFCK NNIDKAMEFFDE+ KAGCFPD+I
Sbjct: 461 KHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKXNNIDKAMEFFDEMFKAGCFPDSI 520
Query: 369 VYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNEM 428
VYYTLICGLAQAGRLDDASFV+SKLKEAGF LDLVC+N+LISEFCKRNKLDKANELLNEM
Sbjct: 521 VYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKRNKLDKANELLNEM 580
Query: 429 ELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNNN 488
ELVGVKPDSVTYNTLISYFS+ GNFKLAHKFMK+MTK EGLLPTV TYGALIHAYCLNNN
Sbjct: 581 ELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFTYGALIHAYCLNNN 640
Query: 489 TDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTYN 548
TD AMKLFKEMSA SKVPP TVIYNILIDSLCKKN+VN ALSL DDM+VRGVKPNTTTYN
Sbjct: 641 TDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVNSALSLFDDMKVRGVKPNTTTYN 700
Query: 549 AILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKKFTQGYKVS 608
A+ KAL EKNWLDKAFELMDRMVEQACNADYITMEILTEWLS+VGETTKLKKFTQGYKVS
Sbjct: 701 AVFKALWEKNWLDKAFELMDRMVEQACNADYITMEILTEWLSSVGETTKLKKFTQGYKVS 760
Query: 609 DSAA 613
S A
Sbjct: 761 TSPA 763
BLAST of Lcy05g009400 vs. NCBI nr
Match:
XP_023514674.1 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1078.2 bits (2787), Expect = 0.0e+00
Identity = 530/612 (86.60%), Postives = 575/612 (93.95%), Query Frame = 0
Query: 1 MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALN 60
M+HS AQ+AV LLRRLGR+GMVD+ALA FS+L+ + KNTYVRNVIIDLLLKSGRVDNALN
Sbjct: 1 MAHSTAQNAVNLLRRLGRSGMVDKALAVFSELDPHKKNTYVRNVIIDLLLKSGRVDNALN 60
Query: 61 VLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITL 120
VLDEMLLP SEFRPNDITADIVFTKLLKINGS+ RVKE+EIAGLVAKFGKHH+ PNPITL
Sbjct: 61 VLDEMLLPDSEFRPNDITADIVFTKLLKINGSDWRVKENEIAGLVAKFGKHHVVPNPITL 120
Query: 121 TQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKD 180
TQLISKLCRSRN DLAW+VLDDLM WNGLKDAAPCNALLTGLGKER+FEKMNLLMRKMKD
Sbjct: 121 TQLISKLCRSRNIDLAWSVLDDLMTWNGLKDAAPCNALLTGLGKEREFEKMNLLMRKMKD 180
Query: 181 MDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKV 240
M++QPNVITFGILINH+CKFR IDDALEVFEKMKGEKE+AK VAPDAITYNTLIDGLCKV
Sbjct: 181 MNVQPNVITFGILINHMCKFRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLIDGLCKV 240
Query: 241 GRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITL 300
GRQEEGLRL+G MRSDGC PNTVTYNCLIDG+CKAG IE AH L+N+MVNEQVVPNVITL
Sbjct: 241 GRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGAIEPAHALYNEMVNEQVVPNVITL 300
Query: 301 NSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISK 360
N+LVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFFDE+SK
Sbjct: 301 NTLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFFDEMSK 360
Query: 361 AGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDK 420
AGCFPDAIVYYTLICGLAQAGRLDDA+ V S++K AGF LDLVCYNLLISEFCK+NKLD+
Sbjct: 361 AGCFPDAIVYYTLICGLAQAGRLDDATSVASRMKAAGFRLDLVCYNLLISEFCKKNKLDE 420
Query: 421 ANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALI 480
ANELL+EME+VG+KPDSVTYNTLISYFSK+GN +LA KFM+KMTKE LLP+V TYGA+I
Sbjct: 421 ANELLDEMEVVGIKPDSVTYNTLISYFSKMGNLELAFKFMEKMTKEACLLPSVFTYGAVI 480
Query: 481 HAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGV 540
HAYCLNNNTD AMKLFKEMSATSKVPP TVIYNILIDSLCK+N+V+ AL+L DDM V GV
Sbjct: 481 HAYCLNNNTDEAMKLFKEMSATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDMNVNGV 540
Query: 541 KPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKK 600
KPNTTTYNAILK L+EK WL+KA E+MDRMVEQACNADYITMEILTEWLS+VGET KLK+
Sbjct: 541 KPNTTTYNAILKGLKEKKWLEKALEVMDRMVEQACNADYITMEILTEWLSSVGETAKLKR 600
Query: 601 FTQGYKVSDSAA 613
FTQGYKVSD AA
Sbjct: 601 FTQGYKVSDFAA 612
BLAST of Lcy05g009400 vs. NCBI nr
Match:
XP_022960097.1 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucurbita moschata] >XP_022960098.1 pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 1071.6 bits (2770), Expect = 2.4e-309
Identity = 526/612 (85.95%), Postives = 573/612 (93.63%), Query Frame = 0
Query: 1 MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALN 60
M+HS Q+AV LLRRLGR+GMVDEALA F++L+ + KNTYVRNVIIDLLLKSGRVDNALN
Sbjct: 1 MAHSTTQNAVNLLRRLGRSGMVDEALAVFTELDPHKKNTYVRNVIIDLLLKSGRVDNALN 60
Query: 61 VLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITL 120
VLDEMLLPGSEFRPNDITADIVFTKLLKINGS+ RVKE+EIAGLVAKFGKHH+ PNPITL
Sbjct: 61 VLDEMLLPGSEFRPNDITADIVFTKLLKINGSDWRVKENEIAGLVAKFGKHHVVPNPITL 120
Query: 121 TQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKD 180
TQLISKLCRSRN DLAW+VLDDLM WNGLKDAAPCNALLTGLGKER+FEKMNLLMRKMKD
Sbjct: 121 TQLISKLCRSRNIDLAWSVLDDLMTWNGLKDAAPCNALLTGLGKEREFEKMNLLMRKMKD 180
Query: 181 MDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKV 240
M++QPNVITFGILINH+CKFR IDDALEVFEKMKGEKE+AK VAPDAITYNTLIDGLCKV
Sbjct: 181 MNVQPNVITFGILINHMCKFRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLIDGLCKV 240
Query: 241 GRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITL 300
GRQEEGLRL+G MRSDGC PNTVTYNCLIDG+CKAG IE AH L+++MVNEQVVPNVITL
Sbjct: 241 GRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGAIETAHALYDEMVNEQVVPNVITL 300
Query: 301 NSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISK 360
N+LVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFFDE+SK
Sbjct: 301 NTLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFFDEMSK 360
Query: 361 AGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDK 420
AGCFPDAIVYYTLICGLAQAGRLDDA+ V ++K AGF LDLVCYNLLISEFCK+NKLD+
Sbjct: 361 AGCFPDAIVYYTLICGLAQAGRLDDATSVALRMKAAGFRLDLVCYNLLISEFCKKNKLDE 420
Query: 421 ANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALI 480
ANELL+EME+VG+KPDSVTYNTLISYFSK+GN +LA KFM+KMTKE LLP+V TYGA+I
Sbjct: 421 ANELLDEMEVVGIKPDSVTYNTLISYFSKMGNLELALKFMEKMTKEACLLPSVFTYGAVI 480
Query: 481 HAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGV 540
HAYCL NNTD AMKLFKEM+ATSKVPP TVIYNILIDSLCK+N+V+ AL+L DDM V GV
Sbjct: 481 HAYCLTNNTDEAMKLFKEMTATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDMNVNGV 540
Query: 541 KPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKK 600
KPNTTTYNAILK L+EK WL+KA E+MDRMVEQACNADYITMEILTEWLS+VGET KLK+
Sbjct: 541 KPNTTTYNAILKGLKEKKWLEKALEVMDRMVEQACNADYITMEILTEWLSSVGETAKLKR 600
Query: 601 FTQGYKVSDSAA 613
FTQGYKVSD AA
Sbjct: 601 FTQGYKVSDFAA 612
BLAST of Lcy05g009400 vs. NCBI nr
Match:
KAG7025273.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1070.5 bits (2767), Expect = 5.6e-309
Identity = 528/612 (86.27%), Postives = 574/612 (93.79%), Query Frame = 0
Query: 1 MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALN 60
M+HS AQ+AV LLRRLGR+GMVDEALA F++L+ + KNTYVRNVIIDLLLKSGRVDNALN
Sbjct: 1 MAHSTAQNAVNLLRRLGRSGMVDEALAVFTELDPHKKNTYVRNVIIDLLLKSGRVDNALN 60
Query: 61 VLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITL 120
VLDEMLLPGSEFRPNDITADIVFTKLLKINGS+ RVKE+EIAGLVAKFGKHH+ PNPITL
Sbjct: 61 VLDEMLLPGSEFRPNDITADIVFTKLLKINGSDWRVKENEIAGLVAKFGKHHVVPNPITL 120
Query: 121 TQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKD 180
TQLISKLCRSRN DLAW+VLDDLM NGLKDAAPCNALLTGLGKER+FEKMNLLMRKMKD
Sbjct: 121 TQLISKLCRSRNIDLAWSVLDDLMTRNGLKDAAPCNALLTGLGKEREFEKMNLLMRKMKD 180
Query: 181 MDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKV 240
M++QPNVITFGILINH+CK R IDDALEVFEKMKGEKE+AK VAPDAITYNTLIDGLCKV
Sbjct: 181 MNVQPNVITFGILINHMCKSRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLIDGLCKV 240
Query: 241 GRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITL 300
GRQEEGLRL+G MRSDGC PNTVTYNCLIDG+CKAG IE AH L+++MVNEQVVPNVITL
Sbjct: 241 GRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGAIETAHALYDEMVNEQVVPNVITL 300
Query: 301 NSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISK 360
N+LVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFFDE+SK
Sbjct: 301 NTLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFFDEMSK 360
Query: 361 AGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDK 420
AGCFPDAIVYYTLICGLAQAGRLDDA+ V S++K AGF LDLVCYNLLISEFCK+NKLD+
Sbjct: 361 AGCFPDAIVYYTLICGLAQAGRLDDATSVASRMKAAGFRLDLVCYNLLISEFCKKNKLDE 420
Query: 421 ANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALI 480
ANELL+EME+VG+KPDSVTYNTLISYFSK+GN +LA KFM+KMTKE LLP+V TYGA+I
Sbjct: 421 ANELLDEMEVVGIKPDSVTYNTLISYFSKMGNLELALKFMEKMTKEACLLPSVFTYGAVI 480
Query: 481 HAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGV 540
HAYCLNNNTD AMKLFKEMSATSKVPP TVIYNILIDSLCK+N+V+ AL+L DDM V GV
Sbjct: 481 HAYCLNNNTDEAMKLFKEMSATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDMNVNGV 540
Query: 541 KPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKK 600
KPNTTTYNAILK L+EK WL+KA E+MDRMVEQACNADYITMEILTEWLS+VGET KLK+
Sbjct: 541 KPNTTTYNAILKGLKEKKWLEKALEVMDRMVEQACNADYITMEILTEWLSSVGETAKLKR 600
Query: 601 FTQGYKVSDSAA 613
FTQGYKVSD AA
Sbjct: 601 FTQGYKVSDFAA 612
BLAST of Lcy05g009400 vs. NCBI nr
Match:
XP_023004956.1 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucurbita maxima] >XP_023004958.1 pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 1060.8 bits (2742), Expect = 4.3e-306
Identity = 523/612 (85.46%), Postives = 569/612 (92.97%), Query Frame = 0
Query: 1 MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALN 60
M+HS AQ+AV LLRRLGR+GMVDEALA FS+L+ + KNTYVRNVIIDLLLKSGRVDNALN
Sbjct: 1 MAHSTAQNAVNLLRRLGRSGMVDEALAVFSELDPHKKNTYVRNVIIDLLLKSGRVDNALN 60
Query: 61 VLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITL 120
VLDEMLLPGSEFRPNDITADIVFTKLLKINGS+ RVKE++IAGLVAKFGKH + PNPITL
Sbjct: 61 VLDEMLLPGSEFRPNDITADIVFTKLLKINGSDWRVKENKIAGLVAKFGKHRVVPNPITL 120
Query: 121 TQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKD 180
TQLISKLCRSRN DLAW+VLDDLM WNGLKDAAPCNALLTGLGKE +FEKMNLLMRKMKD
Sbjct: 121 TQLISKLCRSRNIDLAWSVLDDLMTWNGLKDAAPCNALLTGLGKEMEFEKMNLLMRKMKD 180
Query: 181 MDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKV 240
M++QPNVITF ILINH+CKFR IDDALEVFEKMKGEKE+AK VAPDAITYNTLIDGLCKV
Sbjct: 181 MNVQPNVITFSILINHMCKFRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLIDGLCKV 240
Query: 241 GRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITL 300
GRQEEGLRL+G MRSDGC PNTVTYNCLIDG+CKAG IE AH L+N+MVNEQVVPNVITL
Sbjct: 241 GRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGTIETAHALYNEMVNEQVVPNVITL 300
Query: 301 NSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISK 360
N+LVDGMCKHGRISSAVEFF EMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFFDE+SK
Sbjct: 301 NTLVDGMCKHGRISSAVEFFMEMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFFDEMSK 360
Query: 361 AGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDK 420
AGCFPDAIVYY LI GLAQAGRLDDA+ V S++K AGF LDLVCYNLLISEFCK+NKLD+
Sbjct: 361 AGCFPDAIVYYPLIFGLAQAGRLDDATSVASRMKAAGFRLDLVCYNLLISEFCKKNKLDE 420
Query: 421 ANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALI 480
ANELL+EME+VG+KPD VTYNTLISYFSK+GN +LA KFM+KMTKE LLP+V TYGA+I
Sbjct: 421 ANELLDEMEVVGIKPDIVTYNTLISYFSKMGNLELALKFMEKMTKEACLLPSVFTYGAVI 480
Query: 481 HAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGV 540
HAYCLNNNTD AMKLFKEMSATSKVPP TVIYNILIDSLCK+N+V+ AL+L DDM V GV
Sbjct: 481 HAYCLNNNTDEAMKLFKEMSATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDMNVNGV 540
Query: 541 KPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKK 600
KPNTTTYNAILK L+EK W++KA E+MDRMVEQACNADYITMEILTEWLS+VGET KLK+
Sbjct: 541 KPNTTTYNAILKGLKEKKWMEKALEVMDRMVEQACNADYITMEILTEWLSSVGETAKLKR 600
Query: 601 FTQGYKVSDSAA 613
FTQGYKVSD AA
Sbjct: 601 FTQGYKVSDFAA 612
BLAST of Lcy05g009400 vs. TAIR 10
Match:
AT3G61520.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 589.3 bits (1518), Expect = 3.5e-168
Identity = 301/601 (50.08%), Postives = 422/601 (70.22%), Query Frame = 0
Query: 11 LLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLPGS 70
LL+R GR GMV++++ + +L+SN KN+ VRNV++D+LL++G VD+A VLDEML S
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKES 216
Query: 71 EFRPNDITADIVFTKLLKINGSEGR-VKEDEIAGLVAKFGKHHLAPNPITLTQLISKLCR 130
F PN ITADIV ++ K GR + E++I L+++F H ++PN + LT+ IS LC+
Sbjct: 217 VFPPNRITADIVLHEVWK-----GRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCK 276
Query: 131 SRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVIT 190
+ + AW++L DLM +A P NALL+ LG+ D +MN L+ KM ++ I+P+V+T
Sbjct: 277 NARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVT 336
Query: 191 FGILINHLCKFRRIDDALEVFEKMKGEK-EDAKVVAPDAITYNTLIDGLCKVGRQEEGLR 250
GILIN LCK RR+D+ALEVFEKM+G++ +D V+ D+I +NTLIDGLCKVGR +E
Sbjct: 337 LGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEE 396
Query: 251 LMGMMR-SDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGM 310
L+ M+ + CAPN VTYNCLIDG+C+AG++E A E+ ++M +++ PNV+T+N++V GM
Sbjct: 397 LLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGM 456
Query: 311 CKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDA 370
C+H ++ AV FF +M+++G+KGN VTY I+A C V+N++KAM +++++ +AGC PDA
Sbjct: 457 CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 516
Query: 371 IVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNE 430
+YY LI GL Q R DA VV KLKE GF LDL+ YN+LI FC +N +K E+L +
Sbjct: 517 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTD 576
Query: 431 MELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNN 490
ME G KPDS+TYNTLIS+F K +F+ + M++M +E+GL PTV TYGA+I AYC
Sbjct: 577 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVG 636
Query: 491 NTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTY 550
D A+KLFK+M SKV P TVIYNILI++ K ALSL ++M+++ V+PN TY
Sbjct: 637 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 696
Query: 551 NAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKKFTQGYKV 609
NA+ K L EK + +LMD MVEQ+C + ITMEIL E LS E KL+KF QGY V
Sbjct: 697 NALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSV 751
BLAST of Lcy05g009400 vs. TAIR 10
Match:
AT5G28460.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 587.4 bits (1513), Expect = 1.3e-167
Identity = 298/600 (49.67%), Postives = 420/600 (70.00%), Query Frame = 0
Query: 11 LLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLPGS 70
LL+R GR GMV++++ + +L+SN KN+ VRNV++D+LL++G VD+A VLDEML S
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKES 216
Query: 71 EFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITLTQLISKLCRS 130
F PN ITADIV ++ K E + E++I L+++F H ++PN + LT+ IS LC++
Sbjct: 217 VFPPNRITADIVLHEVWK----ERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKN 276
Query: 131 RNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVITF 190
+ AW++L DLM +A P NALL+ LG+ D +MN L+ KM ++ I+P+V+T
Sbjct: 277 ARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTL 336
Query: 191 GILINHLCKFRRIDDALEVFEKMKGEK-EDAKVVAPDAITYNTLIDGLCKVGRQEEGLRL 250
GILIN LCK RR+D+ALEVFE+M+G++ +D V+ D+I +NTLIDGLCKVGR +E L
Sbjct: 337 GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 396
Query: 251 MGMMR-SDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGMC 310
+ M+ + C PN VTYNCLIDG+C+AG++E A E+ ++M +++ PNV+T+N++V GMC
Sbjct: 397 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 456
Query: 311 KHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDAI 370
+H ++ AV FF +M+++G+KGN VTY I+A C V+N++KAM +++++ +AGC PDA
Sbjct: 457 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 516
Query: 371 VYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNEM 430
+YY LI GL Q R DA VV KLKE GF LDL+ YN+LI FC +N +K E+L +M
Sbjct: 517 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 576
Query: 431 ELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNNN 490
E G KPDS+TYNTLIS+F K +F+ + M++M +E+GL PTV TYGA+I AYC
Sbjct: 577 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVGE 636
Query: 491 TDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTYN 550
D A+KLFK+M SKV P TVIYNILI++ K ALSL ++M+++ V+PN TYN
Sbjct: 637 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 696
Query: 551 AILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKKFTQGYKVS 609
A+ K L EK + +LMD MVEQ+C + ITMEIL E LS E KL+KF QGY V+
Sbjct: 697 ALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSVA 751
BLAST of Lcy05g009400 vs. TAIR 10
Match:
AT5G28370.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 553.1 bits (1424), Expect = 2.7e-157
Identity = 281/580 (48.45%), Postives = 402/580 (69.31%), Query Frame = 0
Query: 11 LLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLPGS 70
LL+R GR GMV++++ + +L+SN KN+ VRNV++D+LL++G VD+A VLDEML S
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKES 216
Query: 71 EFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITLTQLISKLCRS 130
F PN ITADIV ++ K E + E++I L+++F H ++PN + LT+ IS LC++
Sbjct: 217 VFPPNRITADIVLHEVWK----ERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKN 276
Query: 131 RNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVITF 190
+ AW++L DLM +A P NALL+ LG+ D +MN L+ KM ++ I+P+V+T
Sbjct: 277 ARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTL 336
Query: 191 GILINHLCKFRRIDDALEVFEKMKGEK-EDAKVVAPDAITYNTLIDGLCKVGRQEEGLRL 250
GILIN LCK RR+D+ALEVFE+M+G++ +D V+ D+I +NTLIDGLCKVGR +E L
Sbjct: 337 GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 396
Query: 251 MGMMR-SDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGMC 310
+ M+ + C PN VTYNCLIDG+C+AG++E A E+ ++M +++ PNV+T+N++V GMC
Sbjct: 397 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 456
Query: 311 KHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDAI 370
+H ++ AV FF +M+++G+KGN VTY I+A C V+N++KAM +++++ +AGC PDA
Sbjct: 457 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 516
Query: 371 VYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNEM 430
+YY LI GL Q R DA VV KLKE GF LDL+ YN+LI FC +N +K E+L +M
Sbjct: 517 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 576
Query: 431 ELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNNN 490
E G KPDS+TYNTLIS+F K +F+ + M++M +E+GL PTV TYGA+I AYC
Sbjct: 577 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVGE 636
Query: 491 TDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTYN 550
D A+KLFK+M SKV P TVIYNILI++ K ALSL ++M+++ V+PN TYN
Sbjct: 637 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 696
Query: 551 AILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEW 589
A+ K L EK + +LMD MVE N +I ++W
Sbjct: 697 ALFKCLNEKTQGETLLKLMDEMVEHLVN------QIRSQW 725
BLAST of Lcy05g009400 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 271.9 bits (694), Expect = 1.2e-72
Identity = 168/564 (29.79%), Postives = 279/564 (49.47%), Query Frame = 0
Query: 12 LLRRLGRAGMVDEALAAFSKLESN--AKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLPG 71
+L RLGR+G D+ ++S+ T ++I+ + D L+V+D M+
Sbjct: 89 ILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMI--- 148
Query: 72 SEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITLTQLISKLCR 131
EF T + ++L + +K EI+ AK + P+ T LI LCR
Sbjct: 149 DEFGLKPDTH--FYNRMLNLLVDGNSLKLVEISH--AKMSVWGIKPDVSTFNVLIKALCR 208
Query: 132 SRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVIT 191
+ A +L+D+ + + D ++ G +E D + + +M + + ++
Sbjct: 209 AHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVS 268
Query: 192 FGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKVGRQEEGLRL 251
++++ CK R++DAL ++M + PD T+NTL++GLCK G + + +
Sbjct: 269 VNVIVHGFCKEGRVEDALNFIQEMSNQDG----FFPDQYTFNTLVNGLCKAGHVKHAIEI 328
Query: 252 MGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGMCK 311
M +M +G P+ TYN +I G CK GE++ A E+ +QM+ PN +T N+L+ +CK
Sbjct: 329 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 388
Query: 312 HGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDAIV 371
++ A E R + KG+ + T+ I C N AME F+E+ GC PD
Sbjct: 389 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 448
Query: 372 YYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNEME 431
Y LI L G+LD+A ++ +++ +G ++ YN LI FCK NK +A E+ +EME
Sbjct: 449 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 508
Query: 432 LVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNNNT 491
+ GV +SVTYNTLI K + A + M +M EG P +TY +L+ +C +
Sbjct: 509 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM-EGQKPDKYTYNSLLTHFCRGGDI 568
Query: 492 DGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTYNA 551
A + + M++ P I V Y LI LCK +V A LL ++++G+ YN
Sbjct: 569 KKAADIVQAMTSNGCEPDI-VTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNP 628
Query: 552 ILKALREKNWLDKAFELMDRMVEQ 574
+++ L K +A L M+EQ
Sbjct: 629 VIQGLFRKRKTTEAINLFREMLEQ 639
BLAST of Lcy05g009400 vs. TAIR 10
Match:
AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 259.6 bits (662), Expect = 6.3e-69
Identity = 160/546 (29.30%), Postives = 270/546 (49.45%), Query Frame = 0
Query: 43 NVIIDLLLKSGRVDNALNVLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIA 102
NV++++L+ A NV +ML + P T +V +N + D
Sbjct: 186 NVVLEILVSGNCHKVAANVFYDML--SRKIPPTLFTFGVVMKAFCAVN------EIDSAL 245
Query: 103 GLVAKFGKHHLAPNPITLTQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGL 162
L+ KH PN + LI L + + A +L+++ + + DA N ++ GL
Sbjct: 246 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 305
Query: 163 GKERDFEKMNLLMRKMKDMDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKV 222
K + ++ +M P+ IT+G L+N LCK R+D A ++F ++
Sbjct: 306 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF---------YRI 365
Query: 223 VAPDAITYNTLIDGLCKVGRQEEGLRLMG-MMRSDGCAPNTVTYNCLIDGHCKAGEIERA 282
P+ + +NTLI G GR ++ ++ M+ S G P+ TYN LI G+ K G + A
Sbjct: 366 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 425
Query: 283 HELFNQMVNEQVVPNVITLNSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINA 342
E+ + M N+ PNV + LVDG CK G+I A EM GLK N+V + I+A
Sbjct: 426 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 485
Query: 343 FCKVNNIDKAMEFFDEISKAGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLD 402
FCK + I +A+E F E+ + GC PD + +LI GL + + A +++ + G + +
Sbjct: 486 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 545
Query: 403 LVCYNLLISEFCKRNKLDKANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMK 462
V YN LI+ F +R ++ +A +L+NEM G D +TYN+LI + G A +
Sbjct: 546 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 605
Query: 463 KMTKEEGLLPTVHTYGALIHAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCK 522
KM + +G P+ + LI+ C + + A++ KEM P I V +N LI+ LC+
Sbjct: 606 KMLR-DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI-VTFNSLINGLCR 665
Query: 523 KNKVNFALSLLDDMRVRGVKPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYIT 582
++ L++ ++ G+ P+T T+N ++ L + ++ A L+D +E ++ T
Sbjct: 666 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 712
Query: 583 MEILTE 588
IL +
Sbjct: 726 WSILLQ 712
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9M316 | 4.9e-167 | 50.08 | Pentatricopeptide repeat-containing protein At3g61520, mitochondrial OS=Arabidop... | [more] |
Q9LKU8 | 1.8e-166 | 49.67 | Pentatricopeptide repeat-containing protein At5g28460 OS=Arabidopsis thaliana OX... | [more] |
Q9LFF1 | 1.7e-71 | 29.79 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q9FMF6 | 8.8e-68 | 29.30 | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... | [more] |
Q0WKV3 | 1.7e-66 | 32.17 | Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1D191 | 0.0e+00 | 89.90 | pentatricopeptide repeat-containing protein At5g28460 OS=Momordica charantia OX=... | [more] |
A0A6J1H7V3 | 1.1e-309 | 85.95 | pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cuc... | [more] |
A0A6J1KTL0 | 2.1e-306 | 85.46 | pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cuc... | [more] |
A0A1S3BGI7 | 6.2e-290 | 82.06 | pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cuc... | [more] |
A0A5D3DT18 | 6.2e-290 | 82.06 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
XP_022147524.1 | 0.0e+00 | 89.74 | pentatricopeptide repeat-containing protein At5g28460 [Momordica charantia] | [more] |
XP_023514674.1 | 0.0e+00 | 86.60 | pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucur... | [more] |
XP_022960097.1 | 2.4e-309 | 85.95 | pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucur... | [more] |
KAG7025273.1 | 5.6e-309 | 86.27 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_023004956.1 | 4.3e-306 | 85.46 | pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
AT3G61520.1 | 3.5e-168 | 50.08 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G28460.1 | 1.3e-167 | 49.67 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G28370.1 | 2.7e-157 | 48.45 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 1.2e-72 | 29.79 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G64320.1 | 6.3e-69 | 29.30 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |