Lcy05g009400 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g009400
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr05: 9695825 .. 9697663 (-)
RNA-Seq ExpressionLcy05g009400
SyntenyLcy05g009400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCACTCAGCGGCCCAGCATGCTGTTCTTCTACTTCGGCGCCTTGGAAGGGCTGGCATGGTTGATGAGGCGCTCGCTGCGTTTTCTAAACTCGAGTCAAATGCGAAGAACACATATGTTCGTAATGTGATCATTGACTTGCTACTGAAATCTGGGCGTGTTGACAATGCATTGAATGTGCTCGACGAAATGCTTCTTCCAGGTTCGGAGTTTCGACCCAATGATATAACTGCTGATATTGTTTTCACTAAATTGTTGAAGATAAATGGGTCGGAGGGGAGAGTCAAGGAAGATGAAATTGCTGGGTTGGTAGCCAAATTTGGTAAACACCATCTTGCTCCTAATCCCATTACATTAACGCAGTTGATCTCCAAGCTTTGTAGGAGTAGAAATACAGATCTTGCATGGAACGTTTTGGATGATTTGATGATGTGGAATGGTCTTAAGGATGCTGCACCCTGTAATGCGCTTTTGACAGGATTAGGAAAGGAGAGGGATTTTGAGAAGATGAATCTGCTGATGCGAAAGATGAAAGACATGGATATTCAGCCTAATGTTATAACCTTTGGTATTCTTATCAACCATTTATGTAAGTTCAGAAGGATTGATGATGCATTAGAGGTGTTTGAGAAAATGAAGGGGGAAAAGGAGGATGCCAAGGTTGTTGCGCCTGATGCAATCACTTACAATACTTTGATTGATGGGCTTTGTAAAGTGGGGAGGCAAGAAGAAGGATTGCGCTTGATGGGAATGATGAGATCAGATGGCTGTGCACCCAATACCGTTACCTACAATTGTTTGATTGATGGTCATTGTAAAGCAGGTGAAATTGAGAGAGCCCATGAGCTCTTTAATCAGATGGTCAACGAACAAGTGGTGCCAAATGTAATCACCCTCAATTCCTTAGTTGATGGAATGTGCAAGCATGGAAGAATAAGCAGTGCAGTTGAGTTCTTCAGGGAAATGCAGCAGAAGGGCTTGAAAGGAAATTCCGTTACTTACACGGTGTTCATTAATGCTTTTTGCAAAGTCAATAACATTGATAAGGCAATGGAATTTTTTGATGAAATATCCAAAGCTGGATGTTTTCCTGATGCCATTGTCTATTATACTTTGATATGTGGTTTAGCCCAAGCTGGAAGGTTGGATGATGCTAGCTTTGTCGTGTCAAAGTTGAAAGAGGCAGGGTTTCTTCTGGATCTCGTTTGCTACAATCTTCTTATCAGTGAGTTCTGTAAGAGGAACAAATTAGATAAAGCTAATGAGTTGCTGAATGAAATGGAGCTGGTTGGAGTTAAGCCTGACAGTGTCACATACAACACTTTGATTTCCTACTTTAGTAAAATTGGGAATTTCAAACTAGCTCACAAATTTATGAAAAAGATGACCAAGGAGGAGGGTCTCTTACCCACTGTCCACACTTATGGAGCTCTTATTCATGCATATTGTTTAAACAACAACACTGATGGAGCCATGAAGCTTTTCAAGGAAATGAGTGCTACATCAAAGGTTCCTCCGATCACAGTAATCTACAATATATTGATAGATTCTCTATGCAAAAAAAACAAGGTCAATTTCGCCCTTTCTCTATTAGATGATATGAGAGTTAGAGGGGTGAAGCCAAACACCACAACATATAATGCTATTTTAAAAGCCCTTAGGGAGAAGAATTGGTTGGACAAAGCATTTGAACTTATGGATAGAATGGTCGAACAGGCATGTAATGCCGATTATATAACAATGGAGATTTTAACAGAATGGCTTTCTGCAGTTGGTGAAACTACGAAATTGAAAAAGTTTACACAGGGATACAAGGTTTCTGATTCTGCAGCCTAA

mRNA sequence

ATGTCTCACTCAGCGGCCCAGCATGCTGTTCTTCTACTTCGGCGCCTTGGAAGGGCTGGCATGGTTGATGAGGCGCTCGCTGCGTTTTCTAAACTCGAGTCAAATGCGAAGAACACATATGTTCGTAATGTGATCATTGACTTGCTACTGAAATCTGGGCGTGTTGACAATGCATTGAATGTGCTCGACGAAATGCTTCTTCCAGGTTCGGAGTTTCGACCCAATGATATAACTGCTGATATTGTTTTCACTAAATTGTTGAAGATAAATGGGTCGGAGGGGAGAGTCAAGGAAGATGAAATTGCTGGGTTGGTAGCCAAATTTGGTAAACACCATCTTGCTCCTAATCCCATTACATTAACGCAGTTGATCTCCAAGCTTTGTAGGAGTAGAAATACAGATCTTGCATGGAACGTTTTGGATGATTTGATGATGTGGAATGGTCTTAAGGATGCTGCACCCTGTAATGCGCTTTTGACAGGATTAGGAAAGGAGAGGGATTTTGAGAAGATGAATCTGCTGATGCGAAAGATGAAAGACATGGATATTCAGCCTAATGTTATAACCTTTGGTATTCTTATCAACCATTTATGTAAGTTCAGAAGGATTGATGATGCATTAGAGGTGTTTGAGAAAATGAAGGGGGAAAAGGAGGATGCCAAGGTTGTTGCGCCTGATGCAATCACTTACAATACTTTGATTGATGGGCTTTGTAAAGTGGGGAGGCAAGAAGAAGGATTGCGCTTGATGGGAATGATGAGATCAGATGGCTGTGCACCCAATACCGTTACCTACAATTGTTTGATTGATGGTCATTGTAAAGCAGGTGAAATTGAGAGAGCCCATGAGCTCTTTAATCAGATGGTCAACGAACAAGTGGTGCCAAATGTAATCACCCTCAATTCCTTAGTTGATGGAATGTGCAAGCATGGAAGAATAAGCAGTGCAGTTGAGTTCTTCAGGGAAATGCAGCAGAAGGGCTTGAAAGGAAATTCCGTTACTTACACGGTGTTCATTAATGCTTTTTGCAAAGTCAATAACATTGATAAGGCAATGGAATTTTTTGATGAAATATCCAAAGCTGGATGTTTTCCTGATGCCATTGTCTATTATACTTTGATATGTGGTTTAGCCCAAGCTGGAAGGTTGGATGATGCTAGCTTTGTCGTGTCAAAGTTGAAAGAGGCAGGGTTTCTTCTGGATCTCGTTTGCTACAATCTTCTTATCAGTGAGTTCTGTAAGAGGAACAAATTAGATAAAGCTAATGAGTTGCTGAATGAAATGGAGCTGGTTGGAGTTAAGCCTGACAGTGTCACATACAACACTTTGATTTCCTACTTTAGTAAAATTGGGAATTTCAAACTAGCTCACAAATTTATGAAAAAGATGACCAAGGAGGAGGGTCTCTTACCCACTGTCCACACTTATGGAGCTCTTATTCATGCATATTGTTTAAACAACAACACTGATGGAGCCATGAAGCTTTTCAAGGAAATGAGTGCTACATCAAAGGTTCCTCCGATCACAGTAATCTACAATATATTGATAGATTCTCTATGCAAAAAAAACAAGGTCAATTTCGCCCTTTCTCTATTAGATGATATGAGAGTTAGAGGGGTGAAGCCAAACACCACAACATATAATGCTATTTTAAAAGCCCTTAGGGAGAAGAATTGGTTGGACAAAGCATTTGAACTTATGGATAGAATGGTCGAACAGGCATGTAATGCCGATTATATAACAATGGAGATTTTAACAGAATGGCTTTCTGCAGTTGGTGAAACTACGAAATTGAAAAAGTTTACACAGGGATACAAGGTTTCTGATTCTGCAGCCTAA

Coding sequence (CDS)

ATGTCTCACTCAGCGGCCCAGCATGCTGTTCTTCTACTTCGGCGCCTTGGAAGGGCTGGCATGGTTGATGAGGCGCTCGCTGCGTTTTCTAAACTCGAGTCAAATGCGAAGAACACATATGTTCGTAATGTGATCATTGACTTGCTACTGAAATCTGGGCGTGTTGACAATGCATTGAATGTGCTCGACGAAATGCTTCTTCCAGGTTCGGAGTTTCGACCCAATGATATAACTGCTGATATTGTTTTCACTAAATTGTTGAAGATAAATGGGTCGGAGGGGAGAGTCAAGGAAGATGAAATTGCTGGGTTGGTAGCCAAATTTGGTAAACACCATCTTGCTCCTAATCCCATTACATTAACGCAGTTGATCTCCAAGCTTTGTAGGAGTAGAAATACAGATCTTGCATGGAACGTTTTGGATGATTTGATGATGTGGAATGGTCTTAAGGATGCTGCACCCTGTAATGCGCTTTTGACAGGATTAGGAAAGGAGAGGGATTTTGAGAAGATGAATCTGCTGATGCGAAAGATGAAAGACATGGATATTCAGCCTAATGTTATAACCTTTGGTATTCTTATCAACCATTTATGTAAGTTCAGAAGGATTGATGATGCATTAGAGGTGTTTGAGAAAATGAAGGGGGAAAAGGAGGATGCCAAGGTTGTTGCGCCTGATGCAATCACTTACAATACTTTGATTGATGGGCTTTGTAAAGTGGGGAGGCAAGAAGAAGGATTGCGCTTGATGGGAATGATGAGATCAGATGGCTGTGCACCCAATACCGTTACCTACAATTGTTTGATTGATGGTCATTGTAAAGCAGGTGAAATTGAGAGAGCCCATGAGCTCTTTAATCAGATGGTCAACGAACAAGTGGTGCCAAATGTAATCACCCTCAATTCCTTAGTTGATGGAATGTGCAAGCATGGAAGAATAAGCAGTGCAGTTGAGTTCTTCAGGGAAATGCAGCAGAAGGGCTTGAAAGGAAATTCCGTTACTTACACGGTGTTCATTAATGCTTTTTGCAAAGTCAATAACATTGATAAGGCAATGGAATTTTTTGATGAAATATCCAAAGCTGGATGTTTTCCTGATGCCATTGTCTATTATACTTTGATATGTGGTTTAGCCCAAGCTGGAAGGTTGGATGATGCTAGCTTTGTCGTGTCAAAGTTGAAAGAGGCAGGGTTTCTTCTGGATCTCGTTTGCTACAATCTTCTTATCAGTGAGTTCTGTAAGAGGAACAAATTAGATAAAGCTAATGAGTTGCTGAATGAAATGGAGCTGGTTGGAGTTAAGCCTGACAGTGTCACATACAACACTTTGATTTCCTACTTTAGTAAAATTGGGAATTTCAAACTAGCTCACAAATTTATGAAAAAGATGACCAAGGAGGAGGGTCTCTTACCCACTGTCCACACTTATGGAGCTCTTATTCATGCATATTGTTTAAACAACAACACTGATGGAGCCATGAAGCTTTTCAAGGAAATGAGTGCTACATCAAAGGTTCCTCCGATCACAGTAATCTACAATATATTGATAGATTCTCTATGCAAAAAAAACAAGGTCAATTTCGCCCTTTCTCTATTAGATGATATGAGAGTTAGAGGGGTGAAGCCAAACACCACAACATATAATGCTATTTTAAAAGCCCTTAGGGAGAAGAATTGGTTGGACAAAGCATTTGAACTTATGGATAGAATGGTCGAACAGGCATGTAATGCCGATTATATAACAATGGAGATTTTAACAGAATGGCTTTCTGCAGTTGGTGAAACTACGAAATTGAAAAAGTTTACACAGGGATACAAGGTTTCTGATTCTGCAGCCTAA

Protein sequence

MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITLTQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKVGRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKKFTQGYKVSDSAA
Homology
BLAST of Lcy05g009400 vs. ExPASy Swiss-Prot
Match: Q9M316 (Pentatricopeptide repeat-containing protein At3g61520, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g61520 PE=2 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 4.9e-167
Identity = 301/601 (50.08%), Postives = 422/601 (70.22%), Query Frame = 0

Query: 11  LLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLPGS 70
           LL+R  GR GMV++++  + +L+SN KN+ VRNV++D+LL++G VD+A  VLDEML   S
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKES 216

Query: 71  EFRPNDITADIVFTKLLKINGSEGR-VKEDEIAGLVAKFGKHHLAPNPITLTQLISKLCR 130
            F PN ITADIV  ++ K     GR + E++I  L+++F  H ++PN + LT+ IS LC+
Sbjct: 217 VFPPNRITADIVLHEVWK-----GRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCK 276

Query: 131 SRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVIT 190
           +   + AW++L DLM      +A P NALL+ LG+  D  +MN L+ KM ++ I+P+V+T
Sbjct: 277 NARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVT 336

Query: 191 FGILINHLCKFRRIDDALEVFEKMKGEK-EDAKVVAPDAITYNTLIDGLCKVGRQEEGLR 250
            GILIN LCK RR+D+ALEVFEKM+G++ +D  V+  D+I +NTLIDGLCKVGR +E   
Sbjct: 337 LGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEE 396

Query: 251 LMGMMR-SDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGM 310
           L+  M+  + CAPN VTYNCLIDG+C+AG++E A E+ ++M  +++ PNV+T+N++V GM
Sbjct: 397 LLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGM 456

Query: 311 CKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDA 370
           C+H  ++ AV FF +M+++G+KGN VTY   I+A C V+N++KAM +++++ +AGC PDA
Sbjct: 457 CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 516

Query: 371 IVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNE 430
            +YY LI GL Q  R  DA  VV KLKE GF LDL+ YN+LI  FC +N  +K  E+L +
Sbjct: 517 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTD 576

Query: 431 MELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNN 490
           ME  G KPDS+TYNTLIS+F K  +F+   + M++M +E+GL PTV TYGA+I AYC   
Sbjct: 577 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVG 636

Query: 491 NTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTY 550
             D A+KLFK+M   SKV P TVIYNILI++  K      ALSL ++M+++ V+PN  TY
Sbjct: 637 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 696

Query: 551 NAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKKFTQGYKV 609
           NA+ K L EK   +   +LMD MVEQ+C  + ITMEIL E LS   E  KL+KF QGY V
Sbjct: 697 NALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSV 751

BLAST of Lcy05g009400 vs. ExPASy Swiss-Prot
Match: Q9LKU8 (Pentatricopeptide repeat-containing protein At5g28460 OS=Arabidopsis thaliana OX=3702 GN=At5g28460 PE=2 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 1.8e-166
Identity = 298/600 (49.67%), Postives = 420/600 (70.00%), Query Frame = 0

Query: 11  LLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLPGS 70
           LL+R  GR GMV++++  + +L+SN KN+ VRNV++D+LL++G VD+A  VLDEML   S
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKES 216

Query: 71  EFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITLTQLISKLCRS 130
            F PN ITADIV  ++ K    E  + E++I  L+++F  H ++PN + LT+ IS LC++
Sbjct: 217 VFPPNRITADIVLHEVWK----ERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKN 276

Query: 131 RNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVITF 190
              + AW++L DLM      +A P NALL+ LG+  D  +MN L+ KM ++ I+P+V+T 
Sbjct: 277 ARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTL 336

Query: 191 GILINHLCKFRRIDDALEVFEKMKGEK-EDAKVVAPDAITYNTLIDGLCKVGRQEEGLRL 250
           GILIN LCK RR+D+ALEVFE+M+G++ +D  V+  D+I +NTLIDGLCKVGR +E   L
Sbjct: 337 GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 396

Query: 251 MGMMR-SDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGMC 310
           +  M+  + C PN VTYNCLIDG+C+AG++E A E+ ++M  +++ PNV+T+N++V GMC
Sbjct: 397 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 456

Query: 311 KHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDAI 370
           +H  ++ AV FF +M+++G+KGN VTY   I+A C V+N++KAM +++++ +AGC PDA 
Sbjct: 457 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 516

Query: 371 VYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNEM 430
           +YY LI GL Q  R  DA  VV KLKE GF LDL+ YN+LI  FC +N  +K  E+L +M
Sbjct: 517 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 576

Query: 431 ELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNNN 490
           E  G KPDS+TYNTLIS+F K  +F+   + M++M +E+GL PTV TYGA+I AYC    
Sbjct: 577 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVGE 636

Query: 491 TDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTYN 550
            D A+KLFK+M   SKV P TVIYNILI++  K      ALSL ++M+++ V+PN  TYN
Sbjct: 637 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 696

Query: 551 AILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKKFTQGYKVS 609
           A+ K L EK   +   +LMD MVEQ+C  + ITMEIL E LS   E  KL+KF QGY V+
Sbjct: 697 ALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSVA 751

BLAST of Lcy05g009400 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-71
Identity = 168/564 (29.79%), Postives = 279/564 (49.47%), Query Frame = 0

Query: 12  LLRRLGRAGMVDEALAAFSKLESN--AKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLPG 71
           +L RLGR+G  D+       ++S+     T    ++I+   +    D  L+V+D M+   
Sbjct: 89  ILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMI--- 148

Query: 72  SEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITLTQLISKLCR 131
            EF     T    + ++L +      +K  EI+   AK     + P+  T   LI  LCR
Sbjct: 149 DEFGLKPDTH--FYNRMLNLLVDGNSLKLVEISH--AKMSVWGIKPDVSTFNVLIKALCR 208

Query: 132 SRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVIT 191
           +     A  +L+D+  +  + D      ++ G  +E D +    +  +M +     + ++
Sbjct: 209 AHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVS 268

Query: 192 FGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKVGRQEEGLRL 251
             ++++  CK  R++DAL   ++M  +        PD  T+NTL++GLCK G  +  + +
Sbjct: 269 VNVIVHGFCKEGRVEDALNFIQEMSNQDG----FFPDQYTFNTLVNGLCKAGHVKHAIEI 328

Query: 252 MGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGMCK 311
           M +M  +G  P+  TYN +I G CK GE++ A E+ +QM+     PN +T N+L+  +CK
Sbjct: 329 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 388

Query: 312 HGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDAIV 371
             ++  A E  R +  KG+  +  T+   I   C   N   AME F+E+   GC PD   
Sbjct: 389 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 448

Query: 372 YYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNEME 431
           Y  LI  L   G+LD+A  ++ +++ +G    ++ YN LI  FCK NK  +A E+ +EME
Sbjct: 449 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 508

Query: 432 LVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNNNT 491
           + GV  +SVTYNTLI    K    + A + M +M   EG  P  +TY +L+  +C   + 
Sbjct: 509 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM-EGQKPDKYTYNSLLTHFCRGGDI 568

Query: 492 DGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTYNA 551
             A  + + M++    P I V Y  LI  LCK  +V  A  LL  ++++G+      YN 
Sbjct: 569 KKAADIVQAMTSNGCEPDI-VTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNP 628

Query: 552 ILKALREKNWLDKAFELMDRMVEQ 574
           +++ L  K    +A  L   M+EQ
Sbjct: 629 VIQGLFRKRKTTEAINLFREMLEQ 639

BLAST of Lcy05g009400 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 8.8e-68
Identity = 160/546 (29.30%), Postives = 270/546 (49.45%), Query Frame = 0

Query: 43  NVIIDLLLKSGRVDNALNVLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIA 102
           NV++++L+       A NV  +ML    +  P   T  +V      +N      + D   
Sbjct: 186 NVVLEILVSGNCHKVAANVFYDML--SRKIPPTLFTFGVVMKAFCAVN------EIDSAL 245

Query: 103 GLVAKFGKHHLAPNPITLTQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGL 162
            L+    KH   PN +    LI  L +    + A  +L+++ +   + DA   N ++ GL
Sbjct: 246 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 305

Query: 163 GKERDFEKMNLLMRKMKDMDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKV 222
            K     +   ++ +M      P+ IT+G L+N LCK  R+D A ++F          ++
Sbjct: 306 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF---------YRI 365

Query: 223 VAPDAITYNTLIDGLCKVGRQEEGLRLMG-MMRSDGCAPNTVTYNCLIDGHCKAGEIERA 282
             P+ + +NTLI G    GR ++   ++  M+ S G  P+  TYN LI G+ K G +  A
Sbjct: 366 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 425

Query: 283 HELFNQMVNEQVVPNVITLNSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINA 342
            E+ + M N+   PNV +   LVDG CK G+I  A     EM   GLK N+V +   I+A
Sbjct: 426 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 485

Query: 343 FCKVNNIDKAMEFFDEISKAGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLD 402
           FCK + I +A+E F E+ + GC PD   + +LI GL +   +  A +++  +   G + +
Sbjct: 486 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 545

Query: 403 LVCYNLLISEFCKRNKLDKANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMK 462
            V YN LI+ F +R ++ +A +L+NEM   G   D +TYN+LI    + G    A    +
Sbjct: 546 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 605

Query: 463 KMTKEEGLLPTVHTYGALIHAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCK 522
           KM + +G  P+  +   LI+  C +   + A++  KEM      P I V +N LI+ LC+
Sbjct: 606 KMLR-DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI-VTFNSLINGLCR 665

Query: 523 KNKVNFALSLLDDMRVRGVKPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYIT 582
             ++   L++   ++  G+ P+T T+N ++  L +  ++  A  L+D  +E     ++ T
Sbjct: 666 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 712

Query: 583 MEILTE 588
             IL +
Sbjct: 726 WSILLQ 712

BLAST of Lcy05g009400 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.7e-66
Identity = 157/488 (32.17%), Postives = 243/488 (49.80%), Query Frame = 0

Query: 103 GLVAKFGKHHLAPNPITLTQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGL 162
           G + K G     PN IT + LI+ LC       A  ++D ++      D    N L+ GL
Sbjct: 147 GKIIKLG---YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL 206

Query: 163 GKERDFEKMNLLMRKMKDMDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKV 222
                  +  LL+ KM +   QPN +T+G ++N +CK  +   A+E+  KM  E+ + K+
Sbjct: 207 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM--EERNIKL 266

Query: 223 VAPDAITYNTLIDGLCKVGRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAH 282
              DA+ Y+ +IDGLCK G  +    L   M   G   N +TYN LI G C AG  +   
Sbjct: 267 ---DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 326

Query: 283 ELFNQMVNEQVVPNVITLNSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAF 342
           +L   M+  ++ PNV+T + L+D   K G++  A E  +EM  +G+  +++TYT  I+ F
Sbjct: 327 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 386

Query: 343 CKVNNIDKAMEFFDEISKAGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDL 402
           CK N++DKA +  D +   GC P+   +  LI G  +A R+DD   +  K+   G + D 
Sbjct: 387 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 446

Query: 403 VCYNLLISEFCKRNKLDKANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKK 462
           V YN LI  FC+  KL+ A EL  EM    V P+ VTY  L+      G  + A +  +K
Sbjct: 447 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 506

Query: 463 MTKEEGLLPTVHTYGALIHAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKK 522
           + K +  L  +  Y  +IH  C  +  D A  LF  +     V P    YNI+I  LCKK
Sbjct: 507 IEKSKMEL-DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG-VKPGVKTYNIMIGGLCKK 566

Query: 523 NKVNFALSLLDDMRVRGVKPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITM 582
             ++ A  L   M   G  P+  TYN +++A        K+ +L++ +     + D  T+
Sbjct: 567 GPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTI 624

Query: 583 EILTEWLS 591
           +++ + LS
Sbjct: 627 KMVIDMLS 624

BLAST of Lcy05g009400 vs. ExPASy TrEMBL
Match: A0A6J1D191 (pentatricopeptide repeat-containing protein At5g28460 OS=Momordica charantia OX=3673 GN=LOC111016427 PE=4 SV=1)

HSP 1 Score: 1094.3 bits (2829), Expect = 0.0e+00
Identity = 543/604 (89.90%), Postives = 572/604 (94.70%), Query Frame = 0

Query: 9   AVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLP 68
           AVLLLRRLGRAGM DEALA FS+L+S+ KNTYVRNVIIDLLLK+GRVD+A+ VLDEMLLP
Sbjct: 161 AVLLLRRLGRAGMADEALAVFSELDSHTKNTYVRNVIIDLLLKTGRVDSAMKVLDEMLLP 220

Query: 69  GSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITLTQLISKLC 128
           GSEFRPNDITADIVFTKLLK+NG EGRV+EDEIAGLVAKFGKHH+ PN ITLTQLIS+LC
Sbjct: 221 GSEFRPNDITADIVFTKLLKVNGWEGRVREDEIAGLVAKFGKHHVFPNAITLTQLISRLC 280

Query: 129 RSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVI 188
           RSRNTDLAWNVLDD+M  NGLKD APCNALLTGLGKER+FEKMNLLMR+MKDMDIQPNVI
Sbjct: 281 RSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLMRRMKDMDIQPNVI 340

Query: 189 TFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKVGRQEEGLR 248
           TFGILINHLCKFRRIDDALEVFE+MKGEKE AKVVAPDAITYNTLIDGLCKVGRQEEG  
Sbjct: 341 TFGILINHLCKFRRIDDALEVFERMKGEKE-AKVVAPDAITYNTLIDGLCKVGRQEEGSS 400

Query: 249 LMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGMC 308
           LM MMRSDGC PNTVTYNCLIDG+CK+GEIE+AHELFNQM NEQVVPNVITLN+LVDGMC
Sbjct: 401 LMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVPNVITLNTLVDGMC 460

Query: 309 KHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDAI 368
           KHGRISSAVEF REMQQKGLKGNSVTYTVFINAFCK NNIDKAMEFFDE+ KAGCFPD+I
Sbjct: 461 KHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKXNNIDKAMEFFDEMFKAGCFPDSI 520

Query: 369 VYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNEM 428
           VYYTLICGLAQAGRLDDASFV+SKLKEAGF LDLVC+N+LISEFCKRNKLDKANELLNEM
Sbjct: 521 VYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKRNKLDKANELLNEM 580

Query: 429 ELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNNN 488
           ELVGVKPDSVTYNTLISYFS+ GNFKLAHKFMK+MTK EGLLPTV TYGALIHAYCLNNN
Sbjct: 581 ELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFTYGALIHAYCLNNN 640

Query: 489 TDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTYN 548
           TD AMKLFKEMSA SKVPP TVIYNILIDSLCKKN+VN ALSL DDM+VRGVKPNTTTYN
Sbjct: 641 TDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVNSALSLFDDMKVRGVKPNTTTYN 700

Query: 549 AILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKKFTQGYKVS 608
           A+ KAL EKNWLDKAFELMDRMVEQACNADYITMEILTEWLS+VGETTKLKKFTQGYKVS
Sbjct: 701 AVFKALWEKNWLDKAFELMDRMVEQACNADYITMEILTEWLSSVGETTKLKKFTQGYKVS 760

Query: 609 DSAA 613
            S A
Sbjct: 761 TSPA 763

BLAST of Lcy05g009400 vs. ExPASy TrEMBL
Match: A0A6J1H7V3 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111460949 PE=4 SV=1)

HSP 1 Score: 1071.6 bits (2770), Expect = 1.1e-309
Identity = 526/612 (85.95%), Postives = 573/612 (93.63%), Query Frame = 0

Query: 1   MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALN 60
           M+HS  Q+AV LLRRLGR+GMVDEALA F++L+ + KNTYVRNVIIDLLLKSGRVDNALN
Sbjct: 1   MAHSTTQNAVNLLRRLGRSGMVDEALAVFTELDPHKKNTYVRNVIIDLLLKSGRVDNALN 60

Query: 61  VLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITL 120
           VLDEMLLPGSEFRPNDITADIVFTKLLKINGS+ RVKE+EIAGLVAKFGKHH+ PNPITL
Sbjct: 61  VLDEMLLPGSEFRPNDITADIVFTKLLKINGSDWRVKENEIAGLVAKFGKHHVVPNPITL 120

Query: 121 TQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKD 180
           TQLISKLCRSRN DLAW+VLDDLM WNGLKDAAPCNALLTGLGKER+FEKMNLLMRKMKD
Sbjct: 121 TQLISKLCRSRNIDLAWSVLDDLMTWNGLKDAAPCNALLTGLGKEREFEKMNLLMRKMKD 180

Query: 181 MDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKV 240
           M++QPNVITFGILINH+CKFR IDDALEVFEKMKGEKE+AK VAPDAITYNTLIDGLCKV
Sbjct: 181 MNVQPNVITFGILINHMCKFRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLIDGLCKV 240

Query: 241 GRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITL 300
           GRQEEGLRL+G MRSDGC PNTVTYNCLIDG+CKAG IE AH L+++MVNEQVVPNVITL
Sbjct: 241 GRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGAIETAHALYDEMVNEQVVPNVITL 300

Query: 301 NSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISK 360
           N+LVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFFDE+SK
Sbjct: 301 NTLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFFDEMSK 360

Query: 361 AGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDK 420
           AGCFPDAIVYYTLICGLAQAGRLDDA+ V  ++K AGF LDLVCYNLLISEFCK+NKLD+
Sbjct: 361 AGCFPDAIVYYTLICGLAQAGRLDDATSVALRMKAAGFRLDLVCYNLLISEFCKKNKLDE 420

Query: 421 ANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALI 480
           ANELL+EME+VG+KPDSVTYNTLISYFSK+GN +LA KFM+KMTKE  LLP+V TYGA+I
Sbjct: 421 ANELLDEMEVVGIKPDSVTYNTLISYFSKMGNLELALKFMEKMTKEACLLPSVFTYGAVI 480

Query: 481 HAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGV 540
           HAYCL NNTD AMKLFKEM+ATSKVPP TVIYNILIDSLCK+N+V+ AL+L DDM V GV
Sbjct: 481 HAYCLTNNTDEAMKLFKEMTATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDMNVNGV 540

Query: 541 KPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKK 600
           KPNTTTYNAILK L+EK WL+KA E+MDRMVEQACNADYITMEILTEWLS+VGET KLK+
Sbjct: 541 KPNTTTYNAILKGLKEKKWLEKALEVMDRMVEQACNADYITMEILTEWLSSVGETAKLKR 600

Query: 601 FTQGYKVSDSAA 613
           FTQGYKVSD AA
Sbjct: 601 FTQGYKVSDFAA 612

BLAST of Lcy05g009400 vs. ExPASy TrEMBL
Match: A0A6J1KTL0 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111498105 PE=4 SV=1)

HSP 1 Score: 1060.8 bits (2742), Expect = 2.1e-306
Identity = 523/612 (85.46%), Postives = 569/612 (92.97%), Query Frame = 0

Query: 1   MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALN 60
           M+HS AQ+AV LLRRLGR+GMVDEALA FS+L+ + KNTYVRNVIIDLLLKSGRVDNALN
Sbjct: 1   MAHSTAQNAVNLLRRLGRSGMVDEALAVFSELDPHKKNTYVRNVIIDLLLKSGRVDNALN 60

Query: 61  VLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITL 120
           VLDEMLLPGSEFRPNDITADIVFTKLLKINGS+ RVKE++IAGLVAKFGKH + PNPITL
Sbjct: 61  VLDEMLLPGSEFRPNDITADIVFTKLLKINGSDWRVKENKIAGLVAKFGKHRVVPNPITL 120

Query: 121 TQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKD 180
           TQLISKLCRSRN DLAW+VLDDLM WNGLKDAAPCNALLTGLGKE +FEKMNLLMRKMKD
Sbjct: 121 TQLISKLCRSRNIDLAWSVLDDLMTWNGLKDAAPCNALLTGLGKEMEFEKMNLLMRKMKD 180

Query: 181 MDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKV 240
           M++QPNVITF ILINH+CKFR IDDALEVFEKMKGEKE+AK VAPDAITYNTLIDGLCKV
Sbjct: 181 MNVQPNVITFSILINHMCKFRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLIDGLCKV 240

Query: 241 GRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITL 300
           GRQEEGLRL+G MRSDGC PNTVTYNCLIDG+CKAG IE AH L+N+MVNEQVVPNVITL
Sbjct: 241 GRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGTIETAHALYNEMVNEQVVPNVITL 300

Query: 301 NSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISK 360
           N+LVDGMCKHGRISSAVEFF EMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFFDE+SK
Sbjct: 301 NTLVDGMCKHGRISSAVEFFMEMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFFDEMSK 360

Query: 361 AGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDK 420
           AGCFPDAIVYY LI GLAQAGRLDDA+ V S++K AGF LDLVCYNLLISEFCK+NKLD+
Sbjct: 361 AGCFPDAIVYYPLIFGLAQAGRLDDATSVASRMKAAGFRLDLVCYNLLISEFCKKNKLDE 420

Query: 421 ANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALI 480
           ANELL+EME+VG+KPD VTYNTLISYFSK+GN +LA KFM+KMTKE  LLP+V TYGA+I
Sbjct: 421 ANELLDEMEVVGIKPDIVTYNTLISYFSKMGNLELALKFMEKMTKEACLLPSVFTYGAVI 480

Query: 481 HAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGV 540
           HAYCLNNNTD AMKLFKEMSATSKVPP TVIYNILIDSLCK+N+V+ AL+L DDM V GV
Sbjct: 481 HAYCLNNNTDEAMKLFKEMSATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDMNVNGV 540

Query: 541 KPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKK 600
           KPNTTTYNAILK L+EK W++KA E+MDRMVEQACNADYITMEILTEWLS+VGET KLK+
Sbjct: 541 KPNTTTYNAILKGLKEKKWMEKALEVMDRMVEQACNADYITMEILTEWLSSVGETAKLKR 600

Query: 601 FTQGYKVSDSAA 613
           FTQGYKVSD AA
Sbjct: 601 FTQGYKVSDFAA 612

BLAST of Lcy05g009400 vs. ExPASy TrEMBL
Match: A0A1S3BGI7 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103489753 PE=4 SV=1)

HSP 1 Score: 1006.1 bits (2600), Expect = 6.2e-290
Identity = 503/613 (82.06%), Postives = 556/613 (90.70%), Query Frame = 0

Query: 1   MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALN 60
           MS S AQ AV LLR LGR GMVDEALAAFS L+S+AKNT VRN II+LLLKSGRVDNALN
Sbjct: 1   MSLSTAQSAVHLLRHLGRVGMVDEALAAFSTLDSHAKNTNVRNEIINLLLKSGRVDNALN 60

Query: 61  VLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITL 120
           VL EMLLP SEFRPND TA IVF K+LKI+GSEGR KEDEIAGLV+KFGK+++ P+ I L
Sbjct: 61  VLYEMLLPESEFRPNDKTAGIVFNKMLKIDGSEGRAKEDEIAGLVSKFGKYNIFPDTIAL 120

Query: 121 TQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKD 180
           TQLISKLCRS NT+LAWN+LD++MM NGLKDAAPCNALLTGLGK R+F KMNLLMRKMKD
Sbjct: 121 TQLISKLCRSGNTNLAWNILDNMMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKD 180

Query: 181 MDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAK-VVAPDAITYNTLIDGLCK 240
           M+IQP VITFGILIN+LCKFRRIDDALEVFEKMKGEKE+A+ VVAPD I YNTLIDGLCK
Sbjct: 181 MNIQPTVITFGILINYLCKFRRIDDALEVFEKMKGEKEEAEVVVAPDTIMYNTLIDGLCK 240

Query: 241 VGRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVIT 300
           VGRQEEGLRLMG MRS  CAP T TYNCLI+G+C+AGEIE A++LF++MV+EQ+ PNVIT
Sbjct: 241 VGRQEEGLRLMGTMRSGQCAPTTATYNCLINGYCRAGEIEVANKLFSEMVSEQIEPNVIT 300

Query: 301 LNSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEIS 360
           LN+LVDGMCKH RIS+AV+FFR+MQQKGLKGN+VTYTVFINAFC VNN++KAMEF DE+S
Sbjct: 301 LNTLVDGMCKHNRISTAVKFFRDMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMS 360

Query: 361 KAGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLD 420
           K GCFPDA+VYYTLICGLA+AGRLDD+S VVSKLKEAGF LD VCYN+LISEFCK+NKLD
Sbjct: 361 KDGCFPDAVVYYTLICGLARAGRLDDSSSVVSKLKEAGFFLDRVCYNVLISEFCKKNKLD 420

Query: 421 KANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGAL 480
           +A E LN+MEL GVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMT+E+GL PTV TYGAL
Sbjct: 421 RAQEWLNQMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEDGLSPTVFTYGAL 480

Query: 481 IHAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRG 540
           IHAYCLNNN D A+KLFKEM+  SKVPP TVIYNILIDSLCK+ +VNFALSLLDDM+ RG
Sbjct: 481 IHAYCLNNNIDEAIKLFKEMNVASKVPPNTVIYNILIDSLCKQTEVNFALSLLDDMKFRG 540

Query: 541 VKPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLK 600
           V PNTTTYN+I KALRE NWLDKAF+LMDRMVEQACNADYITMEILTEWLS+VGETTKLK
Sbjct: 541 VMPNTTTYNSIFKALRENNWLDKAFKLMDRMVEQACNADYITMEILTEWLSSVGETTKLK 600

Query: 601 KFTQGYKVSDSAA 613
           KFTQG  VSDSAA
Sbjct: 601 KFTQGCMVSDSAA 613

BLAST of Lcy05g009400 vs. ExPASy TrEMBL
Match: A0A5D3DT18 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00300 PE=4 SV=1)

HSP 1 Score: 1006.1 bits (2600), Expect = 6.2e-290
Identity = 503/613 (82.06%), Postives = 556/613 (90.70%), Query Frame = 0

Query: 1   MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALN 60
           MS S AQ AV LLR LGR GMVDEALAAFS L+S+AKNT VRN II+LLLKSGRVDNALN
Sbjct: 1   MSLSTAQSAVHLLRHLGRVGMVDEALAAFSTLDSHAKNTNVRNEIINLLLKSGRVDNALN 60

Query: 61  VLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITL 120
           VL EMLLP SEFRPND TA IVF K+LKI+GSEGR KEDEIAGLV+KFGK+++ P+ I L
Sbjct: 61  VLYEMLLPESEFRPNDKTAGIVFNKMLKIDGSEGRAKEDEIAGLVSKFGKYNIFPDTIAL 120

Query: 121 TQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKD 180
           TQLISKLCRS NT+LAWN+LD++MM NGLKDAAPCNALLTGLGK R+F KMNLLMRKMKD
Sbjct: 121 TQLISKLCRSGNTNLAWNILDNMMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKD 180

Query: 181 MDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAK-VVAPDAITYNTLIDGLCK 240
           M+IQP VITFGILIN+LCKFRRIDDALEVFEKMKGEKE+A+ VVAPD I YNTLIDGLCK
Sbjct: 181 MNIQPTVITFGILINYLCKFRRIDDALEVFEKMKGEKEEAEVVVAPDTIMYNTLIDGLCK 240

Query: 241 VGRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVIT 300
           VGRQEEGLRLMG MRS  CAP T TYNCLI+G+C+AGEIE A++LF++MV+EQ+ PNVIT
Sbjct: 241 VGRQEEGLRLMGTMRSGQCAPTTATYNCLINGYCRAGEIEVANKLFSEMVSEQIEPNVIT 300

Query: 301 LNSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEIS 360
           LN+LVDGMCKH RIS+AV+FFR+MQQKGLKGN+VTYTVFINAFC VNN++KAMEF DE+S
Sbjct: 301 LNTLVDGMCKHNRISTAVKFFRDMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMS 360

Query: 361 KAGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLD 420
           K GCFPDA+VYYTLICGLA+AGRLDD+S VVSKLKEAGF LD VCYN+LISEFCK+NKLD
Sbjct: 361 KDGCFPDAVVYYTLICGLARAGRLDDSSSVVSKLKEAGFFLDRVCYNVLISEFCKKNKLD 420

Query: 421 KANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGAL 480
           +A E LN+MEL GVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMT+E+GL PTV TYGAL
Sbjct: 421 RAQEWLNQMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEDGLSPTVFTYGAL 480

Query: 481 IHAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRG 540
           IHAYCLNNN D A+KLFKEM+  SKVPP TVIYNILIDSLCK+ +VNFALSLLDDM+ RG
Sbjct: 481 IHAYCLNNNIDEAIKLFKEMNVASKVPPNTVIYNILIDSLCKQTEVNFALSLLDDMKFRG 540

Query: 541 VKPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLK 600
           V PNTTTYN+I KALRE NWLDKAF+LMDRMVEQACNADYITMEILTEWLS+VGETTKLK
Sbjct: 541 VMPNTTTYNSIFKALRENNWLDKAFKLMDRMVEQACNADYITMEILTEWLSSVGETTKLK 600

Query: 601 KFTQGYKVSDSAA 613
           KFTQG  VSDSAA
Sbjct: 601 KFTQGCMVSDSAA 613

BLAST of Lcy05g009400 vs. NCBI nr
Match: XP_022147524.1 (pentatricopeptide repeat-containing protein At5g28460 [Momordica charantia])

HSP 1 Score: 1093.6 bits (2827), Expect = 0.0e+00
Identity = 542/604 (89.74%), Postives = 572/604 (94.70%), Query Frame = 0

Query: 9   AVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLP 68
           AVLLLRRLGRAGM +EALA FS+L+S+ KNTYVRNVIIDLLLK+GRVD+A+ VLDEMLLP
Sbjct: 161 AVLLLRRLGRAGMABEALAVFSELDSHTKNTYVRNVIIDLLLKTGRVDSAMKVLDEMLLP 220

Query: 69  GSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITLTQLISKLC 128
           GSEFRPNDITADIVFTKLLK+NG EGRV+EDEIAGLVAKFGKHH+ PN ITLTQLIS+LC
Sbjct: 221 GSEFRPNDITADIVFTKLLKVNGWEGRVREDEIAGLVAKFGKHHVFPNAITLTQLISRLC 280

Query: 129 RSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVI 188
           RSRNTDLAWNVLDD+M  NGLKD APCNALLTGLGKER+FEKMNLLMR+MKDMDIQPNVI
Sbjct: 281 RSRNTDLAWNVLDDVMKLNGLKDVAPCNALLTGLGKEREFEKMNLLMRRMKDMDIQPNVI 340

Query: 189 TFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKVGRQEEGLR 248
           TFGILINHLCKFRRIDDALEVFE+MKGEKE AKVVAPDAITYNTLIDGLCKVGRQEEG  
Sbjct: 341 TFGILINHLCKFRRIDDALEVFERMKGEKE-AKVVAPDAITYNTLIDGLCKVGRQEEGSS 400

Query: 249 LMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGMC 308
           LM MMRSDGC PNTVTYNCLIDG+CK+GEIE+AHELFNQM NEQVVPNVITLN+LVDGMC
Sbjct: 401 LMRMMRSDGCVPNTVTYNCLIDGYCKSGEIEKAHELFNQMANEQVVPNVITLNTLVDGMC 460

Query: 309 KHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDAI 368
           KHGRISSAVEF REMQQKGLKGNSVTYTVFINAFCK NNIDKAMEFFDE+ KAGCFPD+I
Sbjct: 461 KHGRISSAVEFLREMQQKGLKGNSVTYTVFINAFCKXNNIDKAMEFFDEMFKAGCFPDSI 520

Query: 369 VYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNEM 428
           VYYTLICGLAQAGRLDDASFV+SKLKEAGF LDLVC+N+LISEFCKRNKLDKANELLNEM
Sbjct: 521 VYYTLICGLAQAGRLDDASFVMSKLKEAGFRLDLVCFNILISEFCKRNKLDKANELLNEM 580

Query: 429 ELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNNN 488
           ELVGVKPDSVTYNTLISYFS+ GNFKLAHKFMK+MTK EGLLPTV TYGALIHAYCLNNN
Sbjct: 581 ELVGVKPDSVTYNTLISYFSRTGNFKLAHKFMKRMTKHEGLLPTVFTYGALIHAYCLNNN 640

Query: 489 TDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTYN 548
           TD AMKLFKEMSA SKVPP TVIYNILIDSLCKKN+VN ALSL DDM+VRGVKPNTTTYN
Sbjct: 641 TDEAMKLFKEMSAASKVPPNTVIYNILIDSLCKKNEVNSALSLFDDMKVRGVKPNTTTYN 700

Query: 549 AILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKKFTQGYKVS 608
           A+ KAL EKNWLDKAFELMDRMVEQACNADYITMEILTEWLS+VGETTKLKKFTQGYKVS
Sbjct: 701 AVFKALWEKNWLDKAFELMDRMVEQACNADYITMEILTEWLSSVGETTKLKKFTQGYKVS 760

Query: 609 DSAA 613
            S A
Sbjct: 761 TSPA 763

BLAST of Lcy05g009400 vs. NCBI nr
Match: XP_023514674.1 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1078.2 bits (2787), Expect = 0.0e+00
Identity = 530/612 (86.60%), Postives = 575/612 (93.95%), Query Frame = 0

Query: 1   MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALN 60
           M+HS AQ+AV LLRRLGR+GMVD+ALA FS+L+ + KNTYVRNVIIDLLLKSGRVDNALN
Sbjct: 1   MAHSTAQNAVNLLRRLGRSGMVDKALAVFSELDPHKKNTYVRNVIIDLLLKSGRVDNALN 60

Query: 61  VLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITL 120
           VLDEMLLP SEFRPNDITADIVFTKLLKINGS+ RVKE+EIAGLVAKFGKHH+ PNPITL
Sbjct: 61  VLDEMLLPDSEFRPNDITADIVFTKLLKINGSDWRVKENEIAGLVAKFGKHHVVPNPITL 120

Query: 121 TQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKD 180
           TQLISKLCRSRN DLAW+VLDDLM WNGLKDAAPCNALLTGLGKER+FEKMNLLMRKMKD
Sbjct: 121 TQLISKLCRSRNIDLAWSVLDDLMTWNGLKDAAPCNALLTGLGKEREFEKMNLLMRKMKD 180

Query: 181 MDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKV 240
           M++QPNVITFGILINH+CKFR IDDALEVFEKMKGEKE+AK VAPDAITYNTLIDGLCKV
Sbjct: 181 MNVQPNVITFGILINHMCKFRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLIDGLCKV 240

Query: 241 GRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITL 300
           GRQEEGLRL+G MRSDGC PNTVTYNCLIDG+CKAG IE AH L+N+MVNEQVVPNVITL
Sbjct: 241 GRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGAIEPAHALYNEMVNEQVVPNVITL 300

Query: 301 NSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISK 360
           N+LVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFFDE+SK
Sbjct: 301 NTLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFFDEMSK 360

Query: 361 AGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDK 420
           AGCFPDAIVYYTLICGLAQAGRLDDA+ V S++K AGF LDLVCYNLLISEFCK+NKLD+
Sbjct: 361 AGCFPDAIVYYTLICGLAQAGRLDDATSVASRMKAAGFRLDLVCYNLLISEFCKKNKLDE 420

Query: 421 ANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALI 480
           ANELL+EME+VG+KPDSVTYNTLISYFSK+GN +LA KFM+KMTKE  LLP+V TYGA+I
Sbjct: 421 ANELLDEMEVVGIKPDSVTYNTLISYFSKMGNLELAFKFMEKMTKEACLLPSVFTYGAVI 480

Query: 481 HAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGV 540
           HAYCLNNNTD AMKLFKEMSATSKVPP TVIYNILIDSLCK+N+V+ AL+L DDM V GV
Sbjct: 481 HAYCLNNNTDEAMKLFKEMSATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDMNVNGV 540

Query: 541 KPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKK 600
           KPNTTTYNAILK L+EK WL+KA E+MDRMVEQACNADYITMEILTEWLS+VGET KLK+
Sbjct: 541 KPNTTTYNAILKGLKEKKWLEKALEVMDRMVEQACNADYITMEILTEWLSSVGETAKLKR 600

Query: 601 FTQGYKVSDSAA 613
           FTQGYKVSD AA
Sbjct: 601 FTQGYKVSDFAA 612

BLAST of Lcy05g009400 vs. NCBI nr
Match: XP_022960097.1 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucurbita moschata] >XP_022960098.1 pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1071.6 bits (2770), Expect = 2.4e-309
Identity = 526/612 (85.95%), Postives = 573/612 (93.63%), Query Frame = 0

Query: 1   MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALN 60
           M+HS  Q+AV LLRRLGR+GMVDEALA F++L+ + KNTYVRNVIIDLLLKSGRVDNALN
Sbjct: 1   MAHSTTQNAVNLLRRLGRSGMVDEALAVFTELDPHKKNTYVRNVIIDLLLKSGRVDNALN 60

Query: 61  VLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITL 120
           VLDEMLLPGSEFRPNDITADIVFTKLLKINGS+ RVKE+EIAGLVAKFGKHH+ PNPITL
Sbjct: 61  VLDEMLLPGSEFRPNDITADIVFTKLLKINGSDWRVKENEIAGLVAKFGKHHVVPNPITL 120

Query: 121 TQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKD 180
           TQLISKLCRSRN DLAW+VLDDLM WNGLKDAAPCNALLTGLGKER+FEKMNLLMRKMKD
Sbjct: 121 TQLISKLCRSRNIDLAWSVLDDLMTWNGLKDAAPCNALLTGLGKEREFEKMNLLMRKMKD 180

Query: 181 MDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKV 240
           M++QPNVITFGILINH+CKFR IDDALEVFEKMKGEKE+AK VAPDAITYNTLIDGLCKV
Sbjct: 181 MNVQPNVITFGILINHMCKFRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLIDGLCKV 240

Query: 241 GRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITL 300
           GRQEEGLRL+G MRSDGC PNTVTYNCLIDG+CKAG IE AH L+++MVNEQVVPNVITL
Sbjct: 241 GRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGAIETAHALYDEMVNEQVVPNVITL 300

Query: 301 NSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISK 360
           N+LVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFFDE+SK
Sbjct: 301 NTLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFFDEMSK 360

Query: 361 AGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDK 420
           AGCFPDAIVYYTLICGLAQAGRLDDA+ V  ++K AGF LDLVCYNLLISEFCK+NKLD+
Sbjct: 361 AGCFPDAIVYYTLICGLAQAGRLDDATSVALRMKAAGFRLDLVCYNLLISEFCKKNKLDE 420

Query: 421 ANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALI 480
           ANELL+EME+VG+KPDSVTYNTLISYFSK+GN +LA KFM+KMTKE  LLP+V TYGA+I
Sbjct: 421 ANELLDEMEVVGIKPDSVTYNTLISYFSKMGNLELALKFMEKMTKEACLLPSVFTYGAVI 480

Query: 481 HAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGV 540
           HAYCL NNTD AMKLFKEM+ATSKVPP TVIYNILIDSLCK+N+V+ AL+L DDM V GV
Sbjct: 481 HAYCLTNNTDEAMKLFKEMTATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDMNVNGV 540

Query: 541 KPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKK 600
           KPNTTTYNAILK L+EK WL+KA E+MDRMVEQACNADYITMEILTEWLS+VGET KLK+
Sbjct: 541 KPNTTTYNAILKGLKEKKWLEKALEVMDRMVEQACNADYITMEILTEWLSSVGETAKLKR 600

Query: 601 FTQGYKVSDSAA 613
           FTQGYKVSD AA
Sbjct: 601 FTQGYKVSDFAA 612

BLAST of Lcy05g009400 vs. NCBI nr
Match: KAG7025273.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1070.5 bits (2767), Expect = 5.6e-309
Identity = 528/612 (86.27%), Postives = 574/612 (93.79%), Query Frame = 0

Query: 1   MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALN 60
           M+HS AQ+AV LLRRLGR+GMVDEALA F++L+ + KNTYVRNVIIDLLLKSGRVDNALN
Sbjct: 1   MAHSTAQNAVNLLRRLGRSGMVDEALAVFTELDPHKKNTYVRNVIIDLLLKSGRVDNALN 60

Query: 61  VLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITL 120
           VLDEMLLPGSEFRPNDITADIVFTKLLKINGS+ RVKE+EIAGLVAKFGKHH+ PNPITL
Sbjct: 61  VLDEMLLPGSEFRPNDITADIVFTKLLKINGSDWRVKENEIAGLVAKFGKHHVVPNPITL 120

Query: 121 TQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKD 180
           TQLISKLCRSRN DLAW+VLDDLM  NGLKDAAPCNALLTGLGKER+FEKMNLLMRKMKD
Sbjct: 121 TQLISKLCRSRNIDLAWSVLDDLMTRNGLKDAAPCNALLTGLGKEREFEKMNLLMRKMKD 180

Query: 181 MDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKV 240
           M++QPNVITFGILINH+CK R IDDALEVFEKMKGEKE+AK VAPDAITYNTLIDGLCKV
Sbjct: 181 MNVQPNVITFGILINHMCKSRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLIDGLCKV 240

Query: 241 GRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITL 300
           GRQEEGLRL+G MRSDGC PNTVTYNCLIDG+CKAG IE AH L+++MVNEQVVPNVITL
Sbjct: 241 GRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGAIETAHALYDEMVNEQVVPNVITL 300

Query: 301 NSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISK 360
           N+LVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFFDE+SK
Sbjct: 301 NTLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFFDEMSK 360

Query: 361 AGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDK 420
           AGCFPDAIVYYTLICGLAQAGRLDDA+ V S++K AGF LDLVCYNLLISEFCK+NKLD+
Sbjct: 361 AGCFPDAIVYYTLICGLAQAGRLDDATSVASRMKAAGFRLDLVCYNLLISEFCKKNKLDE 420

Query: 421 ANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALI 480
           ANELL+EME+VG+KPDSVTYNTLISYFSK+GN +LA KFM+KMTKE  LLP+V TYGA+I
Sbjct: 421 ANELLDEMEVVGIKPDSVTYNTLISYFSKMGNLELALKFMEKMTKEACLLPSVFTYGAVI 480

Query: 481 HAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGV 540
           HAYCLNNNTD AMKLFKEMSATSKVPP TVIYNILIDSLCK+N+V+ AL+L DDM V GV
Sbjct: 481 HAYCLNNNTDEAMKLFKEMSATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDMNVNGV 540

Query: 541 KPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKK 600
           KPNTTTYNAILK L+EK WL+KA E+MDRMVEQACNADYITMEILTEWLS+VGET KLK+
Sbjct: 541 KPNTTTYNAILKGLKEKKWLEKALEVMDRMVEQACNADYITMEILTEWLSSVGETAKLKR 600

Query: 601 FTQGYKVSDSAA 613
           FTQGYKVSD AA
Sbjct: 601 FTQGYKVSDFAA 612

BLAST of Lcy05g009400 vs. NCBI nr
Match: XP_023004956.1 (pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucurbita maxima] >XP_023004958.1 pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 1060.8 bits (2742), Expect = 4.3e-306
Identity = 523/612 (85.46%), Postives = 569/612 (92.97%), Query Frame = 0

Query: 1   MSHSAAQHAVLLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALN 60
           M+HS AQ+AV LLRRLGR+GMVDEALA FS+L+ + KNTYVRNVIIDLLLKSGRVDNALN
Sbjct: 1   MAHSTAQNAVNLLRRLGRSGMVDEALAVFSELDPHKKNTYVRNVIIDLLLKSGRVDNALN 60

Query: 61  VLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITL 120
           VLDEMLLPGSEFRPNDITADIVFTKLLKINGS+ RVKE++IAGLVAKFGKH + PNPITL
Sbjct: 61  VLDEMLLPGSEFRPNDITADIVFTKLLKINGSDWRVKENKIAGLVAKFGKHRVVPNPITL 120

Query: 121 TQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKD 180
           TQLISKLCRSRN DLAW+VLDDLM WNGLKDAAPCNALLTGLGKE +FEKMNLLMRKMKD
Sbjct: 121 TQLISKLCRSRNIDLAWSVLDDLMTWNGLKDAAPCNALLTGLGKEMEFEKMNLLMRKMKD 180

Query: 181 MDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKV 240
           M++QPNVITF ILINH+CKFR IDDALEVFEKMKGEKE+AK VAPDAITYNTLIDGLCKV
Sbjct: 181 MNVQPNVITFSILINHMCKFRMIDDALEVFEKMKGEKEEAKAVAPDAITYNTLIDGLCKV 240

Query: 241 GRQEEGLRLMGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITL 300
           GRQEEGLRL+G MRSDGC PNTVTYNCLIDG+CKAG IE AH L+N+MVNEQVVPNVITL
Sbjct: 241 GRQEEGLRLLGTMRSDGCKPNTVTYNCLIDGYCKAGTIETAHALYNEMVNEQVVPNVITL 300

Query: 301 NSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISK 360
           N+LVDGMCKHGRISSAVEFF EMQQKGLKGNSVTYTVFINAFCKVNNIDKA+EFFDE+SK
Sbjct: 301 NTLVDGMCKHGRISSAVEFFMEMQQKGLKGNSVTYTVFINAFCKVNNIDKAIEFFDEMSK 360

Query: 361 AGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDK 420
           AGCFPDAIVYY LI GLAQAGRLDDA+ V S++K AGF LDLVCYNLLISEFCK+NKLD+
Sbjct: 361 AGCFPDAIVYYPLIFGLAQAGRLDDATSVASRMKAAGFRLDLVCYNLLISEFCKKNKLDE 420

Query: 421 ANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALI 480
           ANELL+EME+VG+KPD VTYNTLISYFSK+GN +LA KFM+KMTKE  LLP+V TYGA+I
Sbjct: 421 ANELLDEMEVVGIKPDIVTYNTLISYFSKMGNLELALKFMEKMTKEACLLPSVFTYGAVI 480

Query: 481 HAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGV 540
           HAYCLNNNTD AMKLFKEMSATSKVPP TVIYNILIDSLCK+N+V+ AL+L DDM V GV
Sbjct: 481 HAYCLNNNTDEAMKLFKEMSATSKVPPNTVIYNILIDSLCKRNEVSSALALFDDMNVNGV 540

Query: 541 KPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKK 600
           KPNTTTYNAILK L+EK W++KA E+MDRMVEQACNADYITMEILTEWLS+VGET KLK+
Sbjct: 541 KPNTTTYNAILKGLKEKKWMEKALEVMDRMVEQACNADYITMEILTEWLSSVGETAKLKR 600

Query: 601 FTQGYKVSDSAA 613
           FTQGYKVSD AA
Sbjct: 601 FTQGYKVSDFAA 612

BLAST of Lcy05g009400 vs. TAIR 10
Match: AT3G61520.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 589.3 bits (1518), Expect = 3.5e-168
Identity = 301/601 (50.08%), Postives = 422/601 (70.22%), Query Frame = 0

Query: 11  LLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLPGS 70
           LL+R  GR GMV++++  + +L+SN KN+ VRNV++D+LL++G VD+A  VLDEML   S
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKES 216

Query: 71  EFRPNDITADIVFTKLLKINGSEGR-VKEDEIAGLVAKFGKHHLAPNPITLTQLISKLCR 130
            F PN ITADIV  ++ K     GR + E++I  L+++F  H ++PN + LT+ IS LC+
Sbjct: 217 VFPPNRITADIVLHEVWK-----GRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCK 276

Query: 131 SRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVIT 190
           +   + AW++L DLM      +A P NALL+ LG+  D  +MN L+ KM ++ I+P+V+T
Sbjct: 277 NARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVT 336

Query: 191 FGILINHLCKFRRIDDALEVFEKMKGEK-EDAKVVAPDAITYNTLIDGLCKVGRQEEGLR 250
            GILIN LCK RR+D+ALEVFEKM+G++ +D  V+  D+I +NTLIDGLCKVGR +E   
Sbjct: 337 LGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEE 396

Query: 251 LMGMMR-SDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGM 310
           L+  M+  + CAPN VTYNCLIDG+C+AG++E A E+ ++M  +++ PNV+T+N++V GM
Sbjct: 397 LLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGM 456

Query: 311 CKHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDA 370
           C+H  ++ AV FF +M+++G+KGN VTY   I+A C V+N++KAM +++++ +AGC PDA
Sbjct: 457 CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDA 516

Query: 371 IVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNE 430
            +YY LI GL Q  R  DA  VV KLKE GF LDL+ YN+LI  FC +N  +K  E+L +
Sbjct: 517 KIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTD 576

Query: 431 MELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNN 490
           ME  G KPDS+TYNTLIS+F K  +F+   + M++M +E+GL PTV TYGA+I AYC   
Sbjct: 577 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVG 636

Query: 491 NTDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTY 550
             D A+KLFK+M   SKV P TVIYNILI++  K      ALSL ++M+++ V+PN  TY
Sbjct: 637 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 696

Query: 551 NAILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKKFTQGYKV 609
           NA+ K L EK   +   +LMD MVEQ+C  + ITMEIL E LS   E  KL+KF QGY V
Sbjct: 697 NALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSV 751

BLAST of Lcy05g009400 vs. TAIR 10
Match: AT5G28460.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 587.4 bits (1513), Expect = 1.3e-167
Identity = 298/600 (49.67%), Postives = 420/600 (70.00%), Query Frame = 0

Query: 11  LLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLPGS 70
           LL+R  GR GMV++++  + +L+SN KN+ VRNV++D+LL++G VD+A  VLDEML   S
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKES 216

Query: 71  EFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITLTQLISKLCRS 130
            F PN ITADIV  ++ K    E  + E++I  L+++F  H ++PN + LT+ IS LC++
Sbjct: 217 VFPPNRITADIVLHEVWK----ERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKN 276

Query: 131 RNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVITF 190
              + AW++L DLM      +A P NALL+ LG+  D  +MN L+ KM ++ I+P+V+T 
Sbjct: 277 ARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTL 336

Query: 191 GILINHLCKFRRIDDALEVFEKMKGEK-EDAKVVAPDAITYNTLIDGLCKVGRQEEGLRL 250
           GILIN LCK RR+D+ALEVFE+M+G++ +D  V+  D+I +NTLIDGLCKVGR +E   L
Sbjct: 337 GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 396

Query: 251 MGMMR-SDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGMC 310
           +  M+  + C PN VTYNCLIDG+C+AG++E A E+ ++M  +++ PNV+T+N++V GMC
Sbjct: 397 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 456

Query: 311 KHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDAI 370
           +H  ++ AV FF +M+++G+KGN VTY   I+A C V+N++KAM +++++ +AGC PDA 
Sbjct: 457 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 516

Query: 371 VYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNEM 430
           +YY LI GL Q  R  DA  VV KLKE GF LDL+ YN+LI  FC +N  +K  E+L +M
Sbjct: 517 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 576

Query: 431 ELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNNN 490
           E  G KPDS+TYNTLIS+F K  +F+   + M++M +E+GL PTV TYGA+I AYC    
Sbjct: 577 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVGE 636

Query: 491 TDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTYN 550
            D A+KLFK+M   SKV P TVIYNILI++  K      ALSL ++M+++ V+PN  TYN
Sbjct: 637 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 696

Query: 551 AILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEWLSAVGETTKLKKFTQGYKVS 609
           A+ K L EK   +   +LMD MVEQ+C  + ITMEIL E LS   E  KL+KF QGY V+
Sbjct: 697 ALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSVA 751

BLAST of Lcy05g009400 vs. TAIR 10
Match: AT5G28370.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 553.1 bits (1424), Expect = 2.7e-157
Identity = 281/580 (48.45%), Postives = 402/580 (69.31%), Query Frame = 0

Query: 11  LLLRRLGRAGMVDEALAAFSKLESNAKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLPGS 70
           LL+R  GR GMV++++  + +L+SN KN+ VRNV++D+LL++G VD+A  VLDEML   S
Sbjct: 157 LLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKES 216

Query: 71  EFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITLTQLISKLCRS 130
            F PN ITADIV  ++ K    E  + E++I  L+++F  H ++PN + LT+ IS LC++
Sbjct: 217 VFPPNRITADIVLHEVWK----ERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKN 276

Query: 131 RNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVITF 190
              + AW++L DLM      +A P NALL+ LG+  D  +MN L+ KM ++ I+P+V+T 
Sbjct: 277 ARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTL 336

Query: 191 GILINHLCKFRRIDDALEVFEKMKGEK-EDAKVVAPDAITYNTLIDGLCKVGRQEEGLRL 250
           GILIN LCK RR+D+ALEVFE+M+G++ +D  V+  D+I +NTLIDGLCKVGR +E   L
Sbjct: 337 GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 396

Query: 251 MGMMR-SDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGMC 310
           +  M+  + C PN VTYNCLIDG+C+AG++E A E+ ++M  +++ PNV+T+N++V GMC
Sbjct: 397 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 456

Query: 311 KHGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDAI 370
           +H  ++ AV FF +M+++G+KGN VTY   I+A C V+N++KAM +++++ +AGC PDA 
Sbjct: 457 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 516

Query: 371 VYYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNEM 430
           +YY LI GL Q  R  DA  VV KLKE GF LDL+ YN+LI  FC +N  +K  E+L +M
Sbjct: 517 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 576

Query: 431 ELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNNN 490
           E  G KPDS+TYNTLIS+F K  +F+   + M++M +E+GL PTV TYGA+I AYC    
Sbjct: 577 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM-REDGLDPTVTTYGAVIDAYCSVGE 636

Query: 491 TDGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTYN 550
            D A+KLFK+M   SKV P TVIYNILI++  K      ALSL ++M+++ V+PN  TYN
Sbjct: 637 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 696

Query: 551 AILKALREKNWLDKAFELMDRMVEQACNADYITMEILTEW 589
           A+ K L EK   +   +LMD MVE   N      +I ++W
Sbjct: 697 ALFKCLNEKTQGETLLKLMDEMVEHLVN------QIRSQW 725

BLAST of Lcy05g009400 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 271.9 bits (694), Expect = 1.2e-72
Identity = 168/564 (29.79%), Postives = 279/564 (49.47%), Query Frame = 0

Query: 12  LLRRLGRAGMVDEALAAFSKLESN--AKNTYVRNVIIDLLLKSGRVDNALNVLDEMLLPG 71
           +L RLGR+G  D+       ++S+     T    ++I+   +    D  L+V+D M+   
Sbjct: 89  ILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMI--- 148

Query: 72  SEFRPNDITADIVFTKLLKINGSEGRVKEDEIAGLVAKFGKHHLAPNPITLTQLISKLCR 131
            EF     T    + ++L +      +K  EI+   AK     + P+  T   LI  LCR
Sbjct: 149 DEFGLKPDTH--FYNRMLNLLVDGNSLKLVEISH--AKMSVWGIKPDVSTFNVLIKALCR 208

Query: 132 SRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGLGKERDFEKMNLLMRKMKDMDIQPNVIT 191
           +     A  +L+D+  +  + D      ++ G  +E D +    +  +M +     + ++
Sbjct: 209 AHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVS 268

Query: 192 FGILINHLCKFRRIDDALEVFEKMKGEKEDAKVVAPDAITYNTLIDGLCKVGRQEEGLRL 251
             ++++  CK  R++DAL   ++M  +        PD  T+NTL++GLCK G  +  + +
Sbjct: 269 VNVIVHGFCKEGRVEDALNFIQEMSNQDG----FFPDQYTFNTLVNGLCKAGHVKHAIEI 328

Query: 252 MGMMRSDGCAPNTVTYNCLIDGHCKAGEIERAHELFNQMVNEQVVPNVITLNSLVDGMCK 311
           M +M  +G  P+  TYN +I G CK GE++ A E+ +QM+     PN +T N+L+  +CK
Sbjct: 329 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 388

Query: 312 HGRISSAVEFFREMQQKGLKGNSVTYTVFINAFCKVNNIDKAMEFFDEISKAGCFPDAIV 371
             ++  A E  R +  KG+  +  T+   I   C   N   AME F+E+   GC PD   
Sbjct: 389 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 448

Query: 372 YYTLICGLAQAGRLDDASFVVSKLKEAGFLLDLVCYNLLISEFCKRNKLDKANELLNEME 431
           Y  LI  L   G+LD+A  ++ +++ +G    ++ YN LI  FCK NK  +A E+ +EME
Sbjct: 449 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 508

Query: 432 LVGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTKEEGLLPTVHTYGALIHAYCLNNNT 491
           + GV  +SVTYNTLI    K    + A + M +M   EG  P  +TY +L+  +C   + 
Sbjct: 509 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM-EGQKPDKYTYNSLLTHFCRGGDI 568

Query: 492 DGAMKLFKEMSATSKVPPITVIYNILIDSLCKKNKVNFALSLLDDMRVRGVKPNTTTYNA 551
             A  + + M++    P I V Y  LI  LCK  +V  A  LL  ++++G+      YN 
Sbjct: 569 KKAADIVQAMTSNGCEPDI-VTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNP 628

Query: 552 ILKALREKNWLDKAFELMDRMVEQ 574
           +++ L  K    +A  L   M+EQ
Sbjct: 629 VIQGLFRKRKTTEAINLFREMLEQ 639

BLAST of Lcy05g009400 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 259.6 bits (662), Expect = 6.3e-69
Identity = 160/546 (29.30%), Postives = 270/546 (49.45%), Query Frame = 0

Query: 43  NVIIDLLLKSGRVDNALNVLDEMLLPGSEFRPNDITADIVFTKLLKINGSEGRVKEDEIA 102
           NV++++L+       A NV  +ML    +  P   T  +V      +N      + D   
Sbjct: 186 NVVLEILVSGNCHKVAANVFYDML--SRKIPPTLFTFGVVMKAFCAVN------EIDSAL 245

Query: 103 GLVAKFGKHHLAPNPITLTQLISKLCRSRNTDLAWNVLDDLMMWNGLKDAAPCNALLTGL 162
            L+    KH   PN +    LI  L +    + A  +L+++ +   + DA   N ++ GL
Sbjct: 246 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 305

Query: 163 GKERDFEKMNLLMRKMKDMDIQPNVITFGILINHLCKFRRIDDALEVFEKMKGEKEDAKV 222
            K     +   ++ +M      P+ IT+G L+N LCK  R+D A ++F          ++
Sbjct: 306 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF---------YRI 365

Query: 223 VAPDAITYNTLIDGLCKVGRQEEGLRLMG-MMRSDGCAPNTVTYNCLIDGHCKAGEIERA 282
             P+ + +NTLI G    GR ++   ++  M+ S G  P+  TYN LI G+ K G +  A
Sbjct: 366 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 425

Query: 283 HELFNQMVNEQVVPNVITLNSLVDGMCKHGRISSAVEFFREMQQKGLKGNSVTYTVFINA 342
            E+ + M N+   PNV +   LVDG CK G+I  A     EM   GLK N+V +   I+A
Sbjct: 426 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 485

Query: 343 FCKVNNIDKAMEFFDEISKAGCFPDAIVYYTLICGLAQAGRLDDASFVVSKLKEAGFLLD 402
           FCK + I +A+E F E+ + GC PD   + +LI GL +   +  A +++  +   G + +
Sbjct: 486 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 545

Query: 403 LVCYNLLISEFCKRNKLDKANELLNEMELVGVKPDSVTYNTLISYFSKIGNFKLAHKFMK 462
            V YN LI+ F +R ++ +A +L+NEM   G   D +TYN+LI    + G    A    +
Sbjct: 546 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 605

Query: 463 KMTKEEGLLPTVHTYGALIHAYCLNNNTDGAMKLFKEMSATSKVPPITVIYNILIDSLCK 522
           KM + +G  P+  +   LI+  C +   + A++  KEM      P I V +N LI+ LC+
Sbjct: 606 KMLR-DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI-VTFNSLINGLCR 665

Query: 523 KNKVNFALSLLDDMRVRGVKPNTTTYNAILKALREKNWLDKAFELMDRMVEQACNADYIT 582
             ++   L++   ++  G+ P+T T+N ++  L +  ++  A  L+D  +E     ++ T
Sbjct: 666 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 712

Query: 583 MEILTE 588
             IL +
Sbjct: 726 WSILLQ 712

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9M3164.9e-16750.08Pentatricopeptide repeat-containing protein At3g61520, mitochondrial OS=Arabidop... [more]
Q9LKU81.8e-16649.67Pentatricopeptide repeat-containing protein At5g28460 OS=Arabidopsis thaliana OX... [more]
Q9LFF11.7e-7129.79Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Q9FMF68.8e-6829.30Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
Q0WKV31.7e-6632.17Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1D1910.0e+0089.90pentatricopeptide repeat-containing protein At5g28460 OS=Momordica charantia OX=... [more]
A0A6J1H7V31.1e-30985.95pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cuc... [more]
A0A6J1KTL02.1e-30685.46pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cuc... [more]
A0A1S3BGI76.2e-29082.06pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like OS=Cuc... [more]
A0A5D3DT186.2e-29082.06Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
XP_022147524.10.0e+0089.74pentatricopeptide repeat-containing protein At5g28460 [Momordica charantia][more]
XP_023514674.10.0e+0086.60pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucur... [more]
XP_022960097.12.4e-30985.95pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucur... [more]
KAG7025273.15.6e-30986.27Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_023004956.14.3e-30685.46pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Cucur... [more]
Match NameE-valueIdentityDescription
AT3G61520.13.5e-16850.08Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G28460.11.3e-16749.67Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G28370.12.7e-15748.45Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.11.2e-7229.79Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G64320.16.3e-6929.30Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 305..465
e-value: 9.0E-45
score: 155.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 100..216
e-value: 1.8E-20
score: 75.1
coord: 6..99
e-value: 3.7E-10
score: 41.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 217..291
e-value: 2.5E-26
score: 94.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 466..610
e-value: 4.0E-34
score: 120.5
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 224..254
e-value: 3.0E-9
score: 36.5
coord: 468..500
e-value: 2.8E-10
score: 39.7
coord: 182..214
e-value: 8.7E-11
score: 41.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 260..309
e-value: 1.4E-17
score: 63.6
coord: 509..554
e-value: 1.6E-14
score: 53.8
coord: 331..378
e-value: 4.3E-11
score: 42.9
coord: 401..444
e-value: 1.0E-13
score: 51.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 43..66
e-value: 0.015
score: 15.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 438..472
e-value: 9.3E-7
score: 26.6
coord: 228..262
e-value: 1.9E-9
score: 35.1
coord: 403..437
e-value: 3.6E-7
score: 27.9
coord: 298..331
e-value: 6.2E-8
score: 30.3
coord: 474..502
e-value: 1.1E-6
score: 26.5
coord: 369..401
e-value: 2.5E-4
score: 19.0
coord: 263..297
e-value: 2.4E-11
score: 41.1
coord: 188..216
e-value: 4.9E-6
score: 24.4
coord: 333..367
e-value: 6.8E-10
score: 36.5
coord: 510..544
e-value: 1.9E-9
score: 35.1
coord: 546..575
e-value: 1.5E-4
score: 19.8
coord: 155..187
e-value: 7.0E-6
score: 23.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 436..471
score: 10.39137
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 401..435
score: 12.112294
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 366..400
score: 9.514466
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 543..577
score: 10.062531
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 261..295
score: 13.526301
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 151..185
score: 9.646002
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 508..542
score: 11.290196
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 38..72
score: 8.736214
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 226..260
score: 13.603031
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 331..365
score: 12.627475
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 296..330
score: 12.375365
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 186..220
score: 10.314641
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 472..506
score: 10.775016
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 225..598
coord: 12..358
coord: 107..499
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 340..532

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g009400.1Lcy05g009400.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding