Lcy05g008960 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGAGAAATGGAGGCAGGAGGCGAGGACGGGGCGTTCGAGCGAGTGAGGTTGGGAGGCCGAAACAGAGGAGCTTCAATGTCAGTCAGCCATGGATGTGAAGGTAAATTGCAAAACTGTTGTTGCATAAACATTTATGTAAACAGCAACATTCAGGGTGTGAACAATTCAACATTGAATGGAAGTGAGGTCAAAATGGGAAGCCCAGGAGTTTGCTTCTTCTTTGGAGATATTGAACCAAAATCACATCAAAATAACAGATCAGTGCATCAATATCCCAAGCTATGGCAATGGAGTTTGATGCTTCTTGTTCTTGTTGTACTTCTCTTTCTGTTGGTTTTAGAGATGAGAATGTTTCATTCTTAGATTCTTCTTTTGATTTGGTTTCAAGCTAATAGGAATGCCATTGGATGGAAATATCATGGTTCATTGTGATCTCTCCACTGTCCTTGTTGGTTCATATATGATATTGTTTTTAGATTTCTTAATCTTGAAAATGAAGTTCATTTACAC AGGAGAAATGGAGGCAGGAGGCGAGGACGGGGCGTTCGAGCGAGTGAGGTTGGGAGGCCGAAACAGAGGAGCTTCAATGTCAGTCAGCCATGGATGTGAAGGTAAATTGCAAAACTGTTGTTGCATAAACATTTATGTAAACAGCAACATTCAGGGTGTGAACAATTCAACATTGAATGGAAGTGAGGTCAAAATGGGAAGCCCAGGAGTTTGCTTCTTCTTTGGAGATATTGAACCAAAATCACATCAAAATAACAGATCAGTGCATCAATATCCCAAGCTATGGCAATGGAGTTTGATGCTTCTTGTTCTTGTTGTACTTCTCTTTCTGTTGGTTTTAGAGATGAGAATGTTTCATTCTTAGATTCTTCTTTTGATTTGGTTTCAAGCTAATAGGAATGCCATTGGATGGAAATATCATGGTTCATTGTGATCTCTCCACTGTCCTTGTTGGTTCATATATGATATTGTTTTTAGATTTCTTAATCTTGAAAATGAAGTTCATTTACAC ATGGAGGCAGGAGGCGAGGACGGGGCGTTCGAGCGAGTGAGGTTGGGAGGCCGAAACAGAGGAGCTTCAATGTCAGTCAGCCATGGATGTGAAGGTAAATTGCAAAACTGTTGTTGCATAAACATTTATGTAAACAGCAACATTCAGGGTGTGAACAATTCAACATTGAATGGAAGTGAGGTCAAAATGGGAAGCCCAGGAGTTTGCTTCTTCTTTGGAGATATTGAACCAAAATCACATCAAAATAACAGATCAGTGCATCAATATCCCAAGCTATGGCAATGGAGTTTGATGCTTCTTGTTCTTGTTGTACTTCTCTTTCTGTTGGTTTTAGAGATGAGAATGTTTCATTCTTAG MEAGGEDGAFERVRLGGRNRGASMSVSHGCEGKLQNCCCINIYVNSNIQGVNNSTLNGSEVKMGSPGVCFFFGDIEPKSHQNNRSVHQYPKLWQWSLMLLVLVVLLFLLVLEMRMFHS Homology
BLAST of Lcy05g008960 vs. ExPASy TrEMBL
Match: A0A0A0KBZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087970 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.8e-36 Identity = 87/123 (70.73%), Postives = 97/123 (78.86%), Query Frame = 0
BLAST of Lcy05g008960 vs. ExPASy TrEMBL
Match: A0A5A7T8V9 (Xyloglucan galactosyltransferase KATAMARI1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001550 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 5.0e-23 Identity = 60/73 (82.19%), Postives = 61/73 (83.56%), Query Frame = 0
BLAST of Lcy05g008960 vs. ExPASy TrEMBL
Match: A0A059A2V7 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K01423 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.0e-15 Identity = 47/103 (45.63%), Postives = 70/103 (67.96%), Query Frame = 0
BLAST of Lcy05g008960 vs. ExPASy TrEMBL
Match: A0A4V3WKN2 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_013709 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 6.6e-15 Identity = 52/109 (47.71%), Postives = 65/109 (59.63%), Query Frame = 0
BLAST of Lcy05g008960 vs. ExPASy TrEMBL
Match: A0A5N5NR97 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_003635 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 2.5e-14 Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of Lcy05g008960 vs. NCBI nr
Match: KGN46369.1 (hypothetical protein Csa_004893 [Cucumis sativus]) HSP 1 Score: 161.8 bits (408), Expect = 3.7e-36 Identity = 87/123 (70.73%), Postives = 97/123 (78.86%), Query Frame = 0
BLAST of Lcy05g008960 vs. NCBI nr
Match: KAA0039894.1 (xyloglucan galactosyltransferase KATAMARI1-like protein [Cucumis melo var. makuwa] >TYK24608.1 xyloglucan galactosyltransferase KATAMARI1-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 117.1 bits (292), Expect = 1.0e-22 Identity = 60/73 (82.19%), Postives = 61/73 (83.56%), Query Frame = 0
BLAST of Lcy05g008960 vs. NCBI nr
Match: KAG6592845.1 (hypothetical protein SDJN03_12321, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 108.6 bits (270), Expect = 3.7e-20 Identity = 55/63 (87.30%), Postives = 56/63 (88.89%), Query Frame = 0
BLAST of Lcy05g008960 vs. NCBI nr
Match: KCW47685.1 (hypothetical protein EUGRSUZ_K01423 [Eucalyptus grandis]) HSP 1 Score: 92.8 bits (229), Expect = 2.1e-15 Identity = 47/103 (45.63%), Postives = 70/103 (67.96%), Query Frame = 0
BLAST of Lcy05g008960 vs. NCBI nr
Match: KAF5482499.1 (hypothetical protein F2P56_003063 [Juglans regia]) HSP 1 Score: 90.1 bits (222), Expect = 1.4e-14 Identity = 44/79 (55.70%), Postives = 58/79 (73.42%), Query Frame = 0
BLAST of Lcy05g008960 vs. TAIR 10
Match: AT2G20362.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 2.9e-07 Identity = 28/64 (43.75%), Postives = 36/64 (56.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|