Lcy05g008320 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g008320
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Peptidyl-prolyl cis-trans isomerase
Location	Chr05: 8380618 .. 8386203 (-)
RNA-Seq Expression	Lcy05g008320
Synteny	Lcy05g008320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGAACATCTGACCTGCTGGAGAGTACAAACTTTTATACTGGTTGAACTATGCTTGTATCGTGCTGTTTGAATCTTAATGTAATGGTGTAGTACTCATTCGTAAGACACCAAAAGCAGCTGAAAAGCAAGTTAATTTTTTACAGTCCTCGAACTCATCGCTCCTTACGATGGAGCAAAATTTCACAATTCCCAAACTACCCTTCCTCTTCGCTTCTTATATGAGATACTGTTAGCCTTATCAACGGAGCTGCTCTCCATTTCACTTTCCAGCACAAATCTCTCCATCAATGGCGGCTCCTTTTGCTACTACCCCTCTGGTAAACTCCACTCTATTTCTTTCCTCCAATGTCCATGTTCCACTTTCCTAATTTCTGTTTCTACTCCTCCATTTTCACTCTCTGAATTCATCGTCTTCCTTTTGGTTTCTGTTGATTCTGCTTTTTGCAGTCGAAGGTCGGCTTGGTTTCTGGTTCGAATAGCGTTTCTCAGACCAGAGCCTCAGGTTCGTGTAATTCATTTAAGCTTCATAGGGTTCAATTGCCGTCCAATCTTTCGGCGTCGTCGAGTTTTCTGTCCGGTTCGTTGCGTTTTCCTTCTCTGAGAACTTCCTCGAACCCGTTGTCTTCGAGGTCTGCTGCTCGTGGCTCGATCCGTGCTAGTGCCGAGGTTAGAATTTATGCTCTTTCTCTTCATTTTTTAAATGAAATTGGAGAAGGGGAGGAAAATTGTATTTGGGACTTGCTTGATTTTCTGCAGAATCGGTTGTTATGTGTTTGAGATGAATGCAAGCCTTCCCTTAGAAGATTGAAAATGGCATCATCAGTGACTTTGGTTAATGAAGCATTGGTCCTTTTTTCTTTGATTTTAGGTAGCACCTCTTCAAGCGAAAGTAACGAACAAGGTATATTTTGATGTGAGCATTGGAAATCCAGTAGGGAAGCTTGTTGGGAGGATTGTGATTGGATTATTTGGGGATGATGTGCCCCAAACGGCAGAGAACTTCCGTGCTCTTTGCACAGGTATGATATTATGAGACTTTTAGTTGTTTACCTCTTCACCTTAAACATTCAAGTCAGCTTCTGGATGTAACCAACTTTACTAACTTTATTAGGAGAGAAGGGCTTTGGATACAAAGGTTCTGCATTTCATCGTGTAATCAGGGATTTCATGATACAAGGGGGTGACTTTGACAAGGGAAATGTGAGTGCTGTCTAATGTTTTTCCATGTCTACAATTTATTATTTTATGCTCTGGATTAAGAATTTACATTTTCTTTTAACACATCAAACAATGGAATTCATATCTTGTTATATATTTTTTTCTCAAAAATATTTTCTATATATATGCTCACTGACATGTCCAAGCTGTTTCCATAATCAATCAGTCATTTGGTAATTGCCTATCTAGGTGTTATTAGCATCCTATGAGGTTGTTTTAACTCTAAAGGTTGTAGCTTGGGCAGTAGTCCTATGGGGTTGGGTATGCACATACAAGATCATGATTACCATAAATATTATTTATTTCTTGTCAGTTGGAGAGTTTATTGACTCTTAATGGCTTCTTATAGAGAGCTTGTGTATGGTGTTGGACACAATGAAACAAATTAGGCTAGAATTTTAGAATGAAGAGAATATTTGAGAGGAACTTTTTCTATTGTGTGCTATGGCACCTTGCTCAGTTGGAGCTTGATGCTTACAATGGGTGTGAACACCTCTATTTGCAGGTTCTTAGAAGGACTCCAGAGATTTTTAAAATTAATGTCCTAGGTATTAGACATCAAGGAAAATACATAATCCTATCACGTTCCCAAAGACTCTTTGAATAACTCAAAAGACTCTTTGGAATTTGGAAATTATATTTAGCATATGCTAGCTTAACGTGGATTTGCCAAGGTAATTAACACCCCCACCTACCCCAATACAAAAAGAAGAGGTACTTGGTTATGTTATTTGGCTATTATGAATATGACTCTTGAAATTTCTATGATCATCTCCATTTTTTTTCTTTTTTTGGGGGCTCACAATGCGGTGTCTCAAATAAATATGCCTGGAGAAGCCTATAGTTTTAGTAGGAATGAAATATTTCTTTTTATTCTGTTTCAAAAATTTTCAATGCAGTTTAAACTTCAAAGGATAATTTTTGTGAAGATACACTATTTTTAGGTCATTAATGTTGGCTGGTTTGATTGAAATGTTTTGTGAATATGGCAAGTTTCTCATGCTGGAAAAAGAATAGGAAAAACATTGCCTTTCGACATGATTATAATATGACGATGGGAAGAAAGTCAACGTATATGCTATTTTGACATTCATGATAAAGAAGCAAGCACCAGAGAAAATCTAGATGGGGAAACAAATAGGTTCAGTAACATCAACAAATTTCCTGAGATGATAAATTTTTCATCGGCATTGGATAAACCTTTGGATAAAAGGGAGAGAGTTGATGATTTAAGATATAACTACTTACAAAGTTAGTAAACAGTAAGAAGAAATTAGATCTTCTCTAAATGGTTTTATAGTCAATGTTGCATATATTATCTGATGTTAGGGTCTTAATCTATCTTTTCTAAGCTTTCCATCATATCAGGGTGTTTATTTAGAAAGCGTATTTATTCTTTTGAATGATTACTAACCAGATCTTACACTCTCCAGGGAACTGGGGGTAAAAGCATATATGGTCGTACATTTAAAGATGAAAACTTCAAATGTAAGTAAAATCCTGTAGCTCATGCTGCAGTTGCTACTTCTTTTGTTATCTGTTTCTGTGAAAAACTACCAAGATTACTTTTTAACCCCCCCCAAAAAAAGAAAAAAGCCTAATTTTTTTGGATAGCACATGATAATTATAAAATGATTCGACTATTTGCATCATTGACCAGAAGTTGCCACATGTTAGATGTTGCTTCTTTATAACATTATATTTAAACGTTTGGTTATATTATTATTATTATTTTTTGTAACAACTTTCTTGAATAATGAGACAATACAAACGGGAGGAGGAGAGATGGAGATTTTCACTTAAATTATACTGATTATTTTTTCTATTTTATTTTCTGTTGCAAATATCATTGTACTAAAATCATTATAATTTATAATTTTATGTATTTATATTTACATGTGTCAAAGATTATTTGTTTAAAATTTTAGTTTCCTTGAATGAAACATCTGATAAATTCAATGTGAAAATTGGCATCTCTAACGGAGTGCACTTCTTTCCAATTATTTTCTTGAAAAGCTAAATTCTCTTCTTTTTACTTGGAAGATAAAATCGTAGTTTAGTTCTCCAGTAAAGTTTGACTCAAACCTACCTTCTACTGAATTCCTCCAAACTCACTTTCCTTGACTCATCCTACTTATCCACCTTGGTTACACGACCACTCCTTGTTGAGGCTACATAAAGCTCTCTTCCGTCCTTCCAATGTCTTCTCCCTCTCAGGCTATGGTCAAATCTTGAAATGTACAAATTATTAATTTTGCGTTCGTCATCTTGTATTTGATTGGATAGTTCTGGCCGAAATAATTTGGATTTTAGTGTACTCTCTTAGTGAATCTGTTTAAACTTTCCTATGTTATTGAATAAATGGTTATTAAACTTTCCTAAGTAAATTATTAATTTTGCGTTCACCATCTTCTATTTGATTGAATCATAAATTTCAGGTCATTTCAAGTGAACTGTACTTCCTAAATCAATCATTTGCTTATTGAATATGAATGGTGTAGTTCATATTGTGAAACACACGTGAACCTTGGTTGGTCTTTTAACCTTTGCCTTAGACGATAGACAGTAGTTCTGCTAAACATGATACTGTTGTTATAAAGACAACAACTTCTCCCTTGCTTGACACTCTTTCCGTAGGAATATTATCAGTTTTTAATGTCTATATACAGTATGTTCTATATGTTCATTTTATCTATGTATATATGTTTATAAAGAACTGAAGCTTTCAGTGAATGAAAGGCTATGTTCTATGTGTTGTAGTTTGTCCCCTACTCCCCTTTTCTCAACTCTGGAACTTATACTGCTTTGCAGTGAGTCATACTGGTCCAGGAGTTGTCAGCATGGCAAATGCAGGCCCAAACACTAATGGAAGTCAGTTCTTCATATGCACTGTGAAGGTACTGTGCTCGTAAACTCTTACCTTGATAATCTAGTCAGCAGCTAGCATATAAAATTATGATGCTTAGTTGAGTTCCTTGACATATAAAACCTTTTTTTTTTTTTTTTTTGGATTTGAATAGCGATCTACTAATGTACTTATTCTAGTCTGCTTTTCTGACTAGATGCTTATTAGCTGCTGCTTTGGATTTATTATAATTTTATTGAACTTGAAATGGAGAGAATATGCTGAACCAGAGTTCACCATGTTTAGGAAAAATTGCTTGATTGATTTTCATTTTGCATGACTGGAAGTAATCCTGTTCTTCATTTCCTTTTTCTTCTTTCTTTCATGAGAATATAGTACTATGGATGTGAGATTGAGATTTAAACCTTTGATCTTTAGAAAAAAGTTATAATGCCTTAACCATTAAACCGTGTTCAAATTGACATGTTATTGTTGGGTGATAGTATTTAAGTGAAATACCCAGAGTTGCTACTTAGTGATGCATTTGGACACAATATCTATCATTGTTTTTAATATTACAGGTTGTGCGCAGCCGTGTAGGAATTAGATTAGCTCACTAAATGCATTTAGTTGAGATGTGTTGCTTTGTTCTACACATGTACTTCACTAAGTGTTTTTAAGGACAAGAAAAAAGTGTTTTTAAACTCTTTGAAAGTTATTCCAGACAGATACTAATTCAGTTACATTTTGACATGGACTTTCCACTATGCATTTTTTACTATGTGAAATAGCCTTTTATGTCTTATTTGGTTTGCCAACTCCTTATTTTTGCATCTGTTGGGTGTATGTTAGACGCCATGGCTGGATCAGAGGCATGTGGTTTTTGGGCAAGTCCTGGAAGGGTTCGACATTGTTAAGCTAATTGAGTCGCAAGAAACAGACCGTGGAGACCGGCCATTGAAGAAGGTCGTCATCAGTGACTGCGGCGAGGTTCCAGAAGCCTAATTTTACCACATCCAGTTTACTAATCCTCTCTTGTTGTTCCTTTGGATCAGTAATCATAATACAGATGGCCTTTGTTCGAGTCTTTTAGCTTGTAAAATGTATTGTTGATGAAATTGAGCTCAGGAAGCGGGATTTTATTTGAAACGAGATGATGTTTGTGACAAAAAAAATTATGCAAGGATATCATCCAACAGGCTCCCTTTTTTTTTGGAGAGAAATAAAGAGGTTGCCTTATTTGGTTCTGGCATTACAGAGCTGATAATACTTTCCATTTGTAATTTGTGTGTTGATTGACCTATTTTAATAGGTAAAAATTGTCTTTTAAAGACAATCAAAATCATGTATTGGTACTGGAATTTTAGATGTAGATTTCAAATCAATAGGGCAAATCATGTTTTATAGGAGTGATTTTATCTTTTAATTTATAGGAAGGTTGACCAAAGTTGGGATGTCTGTCCCAAAAGGTCAGAGGTTTAAATCTTCGATTTTCTATAATTATGTATATTCTTCCTTTA

mRNA sequence

ATTTGAACATCTGACCTGCTGGAGAGTACAAACTTTTATACTGGTTGAACTATGCTTGTATCGTGCTGTTTGAATCTTAATGTAATGGTGTAGTACTCATTCGTAAGACACCAAAAGCAGCTGAAAAGCAAGTTAATTTTTTACAGTCCTCGAACTCATCGCTCCTTACGATGGAGCAAAATTTCACAATTCCCAAACTACCCTTCCTCTTCGCTTCTTATATGAGATACTGTTAGCCTTATCAACGGAGCTGCTCTCCATTTCACTTTCCAGCACAAATCTCTCCATCAATGGCGGCTCCTTTTGCTACTACCCCTCTGTCGAAGGTCGGCTTGGTTTCTGGTTCGAATAGCGTTTCTCAGACCAGAGCCTCAGGTTCGTGTAATTCATTTAAGCTTCATAGGGTTCAATTGCCGTCCAATCTTTCGGCGTCGTCGAGTTTTCTGTCCGGTTCGTTGCGTTTTCCTTCTCTGAGAACTTCCTCGAACCCGTTGTCTTCGAGGTCTGCTGCTCGTGGCTCGATCCGTGCTAGTGCCGAGGTAGCACCTCTTCAAGCGAAAGTAACGAACAAGGTATATTTTGATGTGAGCATTGGAAATCCAGTAGGGAAGCTTGTTGGGAGGATTGTGATTGGATTATTTGGGGATGATGTGCCCCAAACGGCAGAGAACTTCCGTGCTCTTTGCACAGGAGAGAAGGGCTTTGGATACAAAGGTTCTGCATTTCATCGTGTAATCAGGGATTTCATGATACAAGGGGGTGACTTTGACAAGGGAAATGGAACTGGGGGTAAAAGCATATATGGTCGTACATTTAAAGATGAAAACTTCAAATTGAGTCATACTGGTCCAGGAGTTGTCAGCATGGCAAATGCAGGCCCAAACACTAATGGAAGTCAGTTCTTCATATGCACTGTGAAGACGCCATGGCTGGATCAGAGGCATGTGGTTTTTGGGCAAGTCCTGGAAGGGTTCGACATTGTTAAGCTAATTGAGTCGCAAGAAACAGACCGTGGAGACCGGCCATTGAAGAAGGTCGTCATCAGTGACTGCGGCGAGGTTCCAGAAGCCTAATTTTACCACATCCAGTTTACTAATCCTCTCTTGTTGTTCCTTTGGATCAGTAATCATAATACAGATGGCCTTTGTTCGAGTCTTTTAGCTTGTAAAATGTATTGTTGATGAAATTGAGCTCAGGAAGCGGGATTTTATTTGAAACGAGATGATGTTTGTGACAAAAAAAATTATGCAAGGATATCATCCAACAGGCTCCCTTTTTTTTTGGAGAGAAATAAAGAGGTTGCCTTATTTGGTTCTGGCATTACAGAGCTGATAATACTTTCCATTTGTAATTTGTGTGTTGATTGACCTATTTTAATAGGTAAAAATTGTCTTTTAAAGACAATCAAAATCATGTATTGGTACTGGAATTTTAGATGTAGATTTCAAATCAATAGGGCAAATCATGTTTTATAGGAGTGATTTTATCTTTTAATTTATAGGAAGGTTGACCAAAGTTGGGATGTCTGTCCCAAAAGGTCAGAGGTTTAAATCTTCGATTTTCTATAATTATGTATATTCTTCCTTTA

Coding sequence (CDS)

ATGGCGGCTCCTTTTGCTACTACCCCTCTGTCGAAGGTCGGCTTGGTTTCTGGTTCGAATAGCGTTTCTCAGACCAGAGCCTCAGGTTCGTGTAATTCATTTAAGCTTCATAGGGTTCAATTGCCGTCCAATCTTTCGGCGTCGTCGAGTTTTCTGTCCGGTTCGTTGCGTTTTCCTTCTCTGAGAACTTCCTCGAACCCGTTGTCTTCGAGGTCTGCTGCTCGTGGCTCGATCCGTGCTAGTGCCGAGGTAGCACCTCTTCAAGCGAAAGTAACGAACAAGGTATATTTTGATGTGAGCATTGGAAATCCAGTAGGGAAGCTTGTTGGGAGGATTGTGATTGGATTATTTGGGGATGATGTGCCCCAAACGGCAGAGAACTTCCGTGCTCTTTGCACAGGAGAGAAGGGCTTTGGATACAAAGGTTCTGCATTTCATCGTGTAATCAGGGATTTCATGATACAAGGGGGTGACTTTGACAAGGGAAATGGAACTGGGGGTAAAAGCATATATGGTCGTACATTTAAAGATGAAAACTTCAAATTGAGTCATACTGGTCCAGGAGTTGTCAGCATGGCAAATGCAGGCCCAAACACTAATGGAAGTCAGTTCTTCATATGCACTGTGAAGACGCCATGGCTGGATCAGAGGCATGTGGTTTTTGGGCAAGTCCTGGAAGGGTTCGACATTGTTAAGCTAATTGAGTCGCAAGAAACAGACCGTGGAGACCGGCCATTGAAGAAGGTCGTCATCAGTGACTGCGGCGAGGTTCCAGAAGCCTAA

Protein sequence

MAAPFATTPLSKVGLVSGSNSVSQTRASGSCNSFKLHRVQLPSNLSASSSFLSGSLRFPSLRTSSNPLSSRSAARGSIRASAEVAPLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFGDDVPQTAENFRALCTGEKGFGYKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGEVPEA

Homology

[Close]

BLAST of Lcy05g008320 vs. ExPASy Swiss-Prot
Match: Q9ASS6 (Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL5 PE=1 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.6e-87
Identity = 164/229 (71.62%), Postives = 190/229 (82.97%), Query Frame = 0


Query: 33  SFKLHRVQLPSNLSASSS--FLSGSLRFPSLRTSSNPLSSRSAARGSIRASAE-VAPLQA 92
           SF+L       ++S SSS  F + SL    L TS    + R+    S++++AE V   Q+
Sbjct: 33  SFRLRTKSSFDSISFSSSTPFSASSL---LLHTS---YTKRNHRCFSVQSNAEVVTEPQS 92

Query: 93  KVTNKVYFDVSIGNPVGKLVGRIVIGLFGDDVPQTAENFRALCTGEKGFGYKGSAFHRVI 152
           K+T+KVYFD+S+GNPVGKL GRIVIGL+GDDVPQT ENFRALCTGEKGFGYKGS FHRVI
Sbjct: 93  KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 152

Query: 153 RDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTV 212
           RDFMIQGGDF+KGNGTGGKS+YGRTFKDENFKLSH GPGV+SMANAGPNTNGSQFFICT+
Sbjct: 153 RDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTI 212

Query: 213 KTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGEVP 259
           KT WLD RHVVFGQV+EG ++VKLIE QETDRGDRP KKVVI+DCG++P
Sbjct: 213 KTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQLP 255

[Close]

BLAST of Lcy05g008320 vs. ExPASy Swiss-Prot
Match: P34791 (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.4e-67
Identity = 141/251 (56.18%), Postives = 173/251 (68.92%), Query Frame = 0


Query: 10  LSKVGLVSGSNSVSQTRASGS-CNSFKLHRVQLPSNLSASSSFLSGSLRFPSLRTSSNPL 69
           ++++G    S  VS  R + S C   +   + L S L  +S     S  + + +      
Sbjct: 16  IAQIGFGVKSQLVSANRTTQSVCFGARSSGIALSSRLHYASPIKQFSGVYATTK------ 75

Query: 70  SSRSAARGSIRA-SAEVAPLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFGDDVPQTAEN 129
             R+A   S+ A   EV   QAKVTNKVYFDV IG   G++ GRIV+GLFG+ VP+T EN
Sbjct: 76  HQRTACVKSMAAEEEEVIEPQAKVTNKVYFDVEIG---GEVAGRIVMGLFGEVVPKTVEN 135

Query: 130 FRALCTGEKGFGYKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGP 189
           FRALCTGEK +GYKGS+FHR+I+DFMIQGGDF +GNGTGG SIYG  F+DENF L HTGP
Sbjct: 136 FRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGP 195

Query: 190 GVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLK 249
           G++SMANAGPNTNGSQFFICTVKT WLD +HVVFGQV+EG  +V+ +ESQET   D P K
Sbjct: 196 GILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKK 255

Query: 250 KVVISDCGEVP 259
              I  CGE+P
Sbjct: 256 GCRIYACGELP 257

[Close]

BLAST of Lcy05g008320 vs. ExPASy Swiss-Prot
Match: Q01490 (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) OX=50059 GN=CYPB PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 3.9e-65
Identity = 118/174 (67.82%), Postives = 140/174 (80.46%), Query Frame = 0


Query: 85  APLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFGDDVPQTAENFRALCTGEKGFGYKGSA 144
           A    KVTNKVYFD+  G+   K +GRIV+GL+G+ VP+T ENFRAL TGEKG+GYK S 
Sbjct: 22  ASTNPKVTNKVYFDIKQGD---KDLGRIVLGLYGEVVPKTVENFRALATGEKGYGYKNSK 81

Query: 145 FHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQF 204
           FHRVI+DFMIQGGDF +G+GTGGKSIYG  F DENFKL HTGPG++SMANAG +TNGSQF
Sbjct: 82  FHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQF 141

Query: 205 FICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGEVP 259
           FI TV T WLD RHVVFG+V+EG D+V  IE+ +T  GDRP   V+I+DCGE+P
Sbjct: 142 FITTVTTSWLDGRHVVFGKVIEGMDVVTAIETTKTLPGDRPATPVIIADCGELP 192

[Close]

BLAST of Lcy05g008320 vs. ExPASy Swiss-Prot
Match: Q41651 (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba OX=3906 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 8.6e-65
Identity = 125/200 (62.50%), Postives = 151/200 (75.50%), Query Frame = 0


Query: 60  SLRTSSNPLSSRSAARGSIRASAEVAPLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFGD 119
           S ++ +  ++SR     S  A  EVA LQAKVT+K++FD+ IG   G+  GRIVIGLFGD
Sbjct: 50  SQQSKAKSITSRRITCAS-GAQGEVAELQAKVTSKIFFDIEIG---GESAGRIVIGLFGD 109

Query: 120 DVPQTAENFRALCTGEKGFGYKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDEN 179
            VP+T ENF+ L TG KG+GY+GS FHR+I +FMIQGGDF +GNGTGG SIYG  F+DE+
Sbjct: 110 AVPKTVENFKTLSTGAKGYGYQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDES 169

Query: 180 FKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQET 239
           F L H GPGV+SMANAGPNTNGSQFFICTV TPWLD RHVVFG V+EG D+VK +ESQET
Sbjct: 170 FDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVIEGLDVVKQLESQET 229

Query: 240 DRGDR-PLKKVVISDCGEVP 259
            + D  P K   I+  GE+P
Sbjct: 230 SKLDNSPKKPCKIAKSGELP 245

[Close]

BLAST of Lcy05g008320 vs. ExPASy Swiss-Prot
Match: P80311 (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus OX=9913 GN=PPIB PE=1 SV=4)

HSP 1 Score: 244.2 bits (622), Expect = 1.6e-63
Identity = 116/168 (69.05%), Postives = 137/168 (81.55%), Query Frame = 0


Query: 90  KVTNKVYFDVSIGNPVGKLVGRIVIGLFGDDVPQTAENFRALCTGEKGFGYKGSAFHRVI 149
           KVT KVYFD+ IG+   + +GR+VIGLFG  VP+T +NF AL TGEKGFGYK S FHRVI
Sbjct: 41  KVTVKVYFDLRIGD---EDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVI 100

Query: 150 RDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTV 209
           +DFMIQGGDF +G+GTGGKSIYG  F DENFKL H GPG VSMANAG +TNGSQFFI TV
Sbjct: 101 KDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTV 160

Query: 210 KTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGEV 258
           KT WLD +HVVFG+VLEG D+V+ +ES +TD  D+PLK V I+DCG++
Sbjct: 161 KTAWLDGKHVVFGKVLEGMDVVRKVESTKTDGRDKPLKDVTIADCGKI 205

[Close]

BLAST of Lcy05g008320 vs. ExPASy TrEMBL
Match: A0A6J1JQJ8 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111488028 PE=3 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.3e-127
Identity = 235/260 (90.38%), Postives = 245/260 (94.23%), Query Frame = 0


Query: 1   MAAPFATTPLSKVGLVSGSNSVSQTRASGSCNSFKLHRVQLPSNLSASSSFLSGSLRFPS 60
           MAAPFATTPLSKVGL+S SNS SQTRA G CNS  LHRVQLPSNLS++SSFL GSL+FPS
Sbjct: 1   MAAPFATTPLSKVGLLSCSNSASQTRAYGPCNSVNLHRVQLPSNLSSASSFLCGSLQFPS 60

Query: 61  LRTSSNPLSSRSAARGSIRASAEVAPLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFGDD 120
           LRTS NPLSSR+A R S+RASAEV P QAKVTNKVYFDVSIGNPVGKL GRIVIGLFGDD
Sbjct: 61  LRTSWNPLSSRTAVRSSVRASAEVVP-QAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 120

Query: 121 VPQTAENFRALCTGEKGFGYKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180
           VP+TAENFRALCTGEKGFGYKGSAFHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDENF
Sbjct: 121 VPKTAENFRALCTGEKGFGYKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180

Query: 181 KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETD 240
           KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVK IE+QETD
Sbjct: 181 KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKQIEAQETD 240

Query: 241 RGDRPLKKVVISDCGEVPEA 261
           RGDRPLKKVVISDCGE+P A
Sbjct: 241 RGDRPLKKVVISDCGELPVA 259

[Close]

BLAST of Lcy05g008320 vs. ExPASy TrEMBL
Match: A0A6J1GQU2 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111456632 PE=3 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 2.0e-125
Identity = 233/260 (89.62%), Postives = 242/260 (93.08%), Query Frame = 0


Query: 1   MAAPFATTPLSKVGLVSGSNSVSQTRASGSCNSFKLHRVQLPSNLSASSSFLSGSLRFPS 60
           MAAPFATTPLSKVGL+S SNS SQTRA G   S  LHRVQLPSNLS++SSFL GSL FPS
Sbjct: 1   MAAPFATTPLSKVGLLSCSNSASQTRAYGPRTSVNLHRVQLPSNLSSASSFLCGSLHFPS 60

Query: 61  LRTSSNPLSSRSAARGSIRASAEVAPLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFGDD 120
           LRTS NPLSSR+A R S+RASAEV P QAKVTNKVYFDVSIGNPVGKL GRIVIGLFGDD
Sbjct: 61  LRTSWNPLSSRTAVRSSVRASAEVVP-QAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 120

Query: 121 VPQTAENFRALCTGEKGFGYKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180
           VP+TAENFRALCTGEKGFGYKGSAFHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDENF
Sbjct: 121 VPKTAENFRALCTGEKGFGYKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180

Query: 181 KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETD 240
           KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVK IE+QETD
Sbjct: 181 KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKQIEAQETD 240

Query: 241 RGDRPLKKVVISDCGEVPEA 261
           RGDRPLKKVVISDCGE+P A
Sbjct: 241 RGDRPLKKVVISDCGELPVA 259

[Close]

BLAST of Lcy05g008320 vs. ExPASy TrEMBL
Match: A0A6J1D5G4 (Peptidyl-prolyl cis-trans isomerase OS=Momordica charantia OX=3673 GN=LOC111017484 PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 8.0e-114
Identity = 215/262 (82.06%), Postives = 228/262 (87.02%), Query Frame = 0


Query: 1   MAAPFATTPLSKVGLVSGSNSVSQTRASGSCNSFKLHRVQLPSNLSASSSFLSGSLRFPS 60
           +AAPFAT PL            S TRAS  CNS KLHR QLP      ++FLSGSL FPS
Sbjct: 3   LAAPFATIPL------------SDTRASAPCNSLKLHRFQLP------AAFLSGSLHFPS 62

Query: 61  LRTSSNPLSSRSA--ARGSIRASAEVAPLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFG 120
           L+ SSNP SSR+A   R S+RASAE APLQAKVT+KVYFDVSIGNPVGKL GRIVIGLFG
Sbjct: 63  LKASSNPFSSRTAVPVRTSVRASAEAAPLQAKVTSKVYFDVSIGNPVGKLAGRIVIGLFG 122

Query: 121 DDVPQTAENFRALCTGEKGFGYKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDE 180
           DDVP+TAENFRALCTGEKGFG+KGSAFHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDE
Sbjct: 123 DDVPKTAENFRALCTGEKGFGFKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDE 182

Query: 181 NFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQE 240
           NFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGF+IVKLIESQ+
Sbjct: 183 NFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFEIVKLIESQD 242

Query: 241 TDRGDRPLKKVVISDCGEVPEA 261
           TDRGDRPLKKVVISDCGE+P A
Sbjct: 243 TDRGDRPLKKVVISDCGELPVA 246

[Close]

BLAST of Lcy05g008320 vs. ExPASy TrEMBL
Match: A0A5D3DM20 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002150 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 3.4e-112
Identity = 215/260 (82.69%), Postives = 227/260 (87.31%), Query Frame = 0


Query: 1   MAAPFATTPLSKVGLVSGSNSVSQTRASGSCNSFKLHRVQLPSNLSASSSFLSGSLRFPS 60
           MA+  AT PL  V   SGS+    T+A G  NS KLH ++LPS    SSSFLSGSL FPS
Sbjct: 1   MASSLATRPL--VAFASGSH----TKAWGPSNSVKLHMLRLPS----SSSFLSGSLHFPS 60

Query: 61  LRTSSNPLSSRSAARGSIRASAEVAPLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFGDD 120
           L TS NPLSSR + R  +RASAEV PLQAKVTNKVYFDVSIGNPVGKL GRIVIGLFGDD
Sbjct: 61  LTTSLNPLSSRISVRSFVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 120

Query: 121 VPQTAENFRALCTGEKGFGYKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180
           VP+TAENFRALCTGEKGFG+KGSAFHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDENF
Sbjct: 121 VPKTAENFRALCTGEKGFGFKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180

Query: 181 KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETD 240
            LSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGF+ VKLIESQETD
Sbjct: 181 NLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFETVKLIESQETD 240

Query: 241 RGDRPLKKVVISDCGEVPEA 261
           RGDRPLKKVVISDCGE+P A
Sbjct: 241 RGDRPLKKVVISDCGELPVA 250

[Close]

BLAST of Lcy05g008320 vs. ExPASy TrEMBL
Match: A0A1S3CBN7 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103498867 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 3.4e-112
Identity = 215/260 (82.69%), Postives = 227/260 (87.31%), Query Frame = 0


Query: 1   MAAPFATTPLSKVGLVSGSNSVSQTRASGSCNSFKLHRVQLPSNLSASSSFLSGSLRFPS 60
           MA+  AT PL  V   SGS+    T+A G  NS KLH ++LPS    SSSFLSGSL FPS
Sbjct: 1   MASSLATRPL--VAFASGSH----TKAWGPSNSVKLHMLRLPS----SSSFLSGSLHFPS 60

Query: 61  LRTSSNPLSSRSAARGSIRASAEVAPLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFGDD 120
           L TS NPLSSR + R  +RASAEV PLQAKVTNKVYFDVSIGNPVGKL GRIVIGLFGDD
Sbjct: 61  LTTSLNPLSSRISVRSFVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 120

Query: 121 VPQTAENFRALCTGEKGFGYKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180
           VP+TAENFRALCTGEKGFG+KGSAFHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDENF
Sbjct: 121 VPKTAENFRALCTGEKGFGFKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180

Query: 181 KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETD 240
            LSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGF+ VKLIESQETD
Sbjct: 181 NLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFETVKLIESQETD 240

Query: 241 RGDRPLKKVVISDCGEVPEA 261
           RGDRPLKKVVISDCGE+P A
Sbjct: 241 RGDRPLKKVVISDCGELPVA 250

[Close]

BLAST of Lcy05g008320 vs. NCBI nr
Match: XP_022991375.1 (photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Cucurbita maxima] >XP_022991376.1 photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 465.7 bits (1197), Expect = 2.6e-127
Identity = 235/260 (90.38%), Postives = 245/260 (94.23%), Query Frame = 0


Query: 1   MAAPFATTPLSKVGLVSGSNSVSQTRASGSCNSFKLHRVQLPSNLSASSSFLSGSLRFPS 60
           MAAPFATTPLSKVGL+S SNS SQTRA G CNS  LHRVQLPSNLS++SSFL GSL+FPS
Sbjct: 1   MAAPFATTPLSKVGLLSCSNSASQTRAYGPCNSVNLHRVQLPSNLSSASSFLCGSLQFPS 60

Query: 61  LRTSSNPLSSRSAARGSIRASAEVAPLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFGDD 120
           LRTS NPLSSR+A R S+RASAEV P QAKVTNKVYFDVSIGNPVGKL GRIVIGLFGDD
Sbjct: 61  LRTSWNPLSSRTAVRSSVRASAEVVP-QAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 120

Query: 121 VPQTAENFRALCTGEKGFGYKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180
           VP+TAENFRALCTGEKGFGYKGSAFHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDENF
Sbjct: 121 VPKTAENFRALCTGEKGFGYKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180

Query: 181 KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETD 240
           KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVK IE+QETD
Sbjct: 181 KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKQIEAQETD 240

Query: 241 RGDRPLKKVVISDCGEVPEA 261
           RGDRPLKKVVISDCGE+P A
Sbjct: 241 RGDRPLKKVVISDCGELPVA 259

[Close]

BLAST of Lcy05g008320 vs. NCBI nr
Match: XP_038875935.1 (photosynthetic NDH subunit of lumenal location 5, chloroplastic [Benincasa hispida])

HSP 1 Score: 459.1 bits (1180), Expect = 2.5e-125
Identity = 233/260 (89.62%), Postives = 242/260 (93.08%), Query Frame = 0


Query: 1   MAAPFATTPLSKVGLVSGSNSVSQTRASGSCNSFKLHRVQLPSNLSASSSFLSGSLRFPS 60
           MAAPFAT+PL  VGL SGSN+VSQT+AS   NS  LHRVQ PSNLS+SSSFLSGSL FPS
Sbjct: 1   MAAPFATSPL--VGLASGSNTVSQTKASAPFNSVNLHRVQSPSNLSSSSSFLSGSLHFPS 60

Query: 61  LRTSSNPLSSRSAARGSIRASAEVAPLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFGDD 120
           L TS NPLSSR A R S+RASAEV PLQAKVTNKVYFDVSIGNPVGKL GRIVIGLFGDD
Sbjct: 61  LTTSFNPLSSRIAVRSSVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 120

Query: 121 VPQTAENFRALCTGEKGFGYKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180
           VP+TAENFRALCTGEKGFG+KGSAFHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDENF
Sbjct: 121 VPKTAENFRALCTGEKGFGFKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180

Query: 181 KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETD 240
           KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETD
Sbjct: 181 KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETD 240

Query: 241 RGDRPLKKVVISDCGEVPEA 261
           RGDRPLKKVVISDCGE+P A
Sbjct: 241 RGDRPLKKVVISDCGELPVA 258

[Close]

BLAST of Lcy05g008320 vs. NCBI nr
Match: XP_022954376.1 (photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Cucurbita moschata] >XP_022954377.1 photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Cucurbita moschata] >XP_023532804.1 photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023532812.1 photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG7014639.1 Photosynthetic NDH subunit of lumenal location 5, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 458.4 bits (1178), Expect = 4.2e-125
Identity = 233/260 (89.62%), Postives = 242/260 (93.08%), Query Frame = 0


Query: 1   MAAPFATTPLSKVGLVSGSNSVSQTRASGSCNSFKLHRVQLPSNLSASSSFLSGSLRFPS 60
           MAAPFATTPLSKVGL+S SNS SQTRA G   S  LHRVQLPSNLS++SSFL GSL FPS
Sbjct: 1   MAAPFATTPLSKVGLLSCSNSASQTRAYGPRTSVNLHRVQLPSNLSSASSFLCGSLHFPS 60

Query: 61  LRTSSNPLSSRSAARGSIRASAEVAPLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFGDD 120
           LRTS NPLSSR+A R S+RASAEV P QAKVTNKVYFDVSIGNPVGKL GRIVIGLFGDD
Sbjct: 61  LRTSWNPLSSRTAVRSSVRASAEVVP-QAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 120

Query: 121 VPQTAENFRALCTGEKGFGYKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180
           VP+TAENFRALCTGEKGFGYKGSAFHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDENF
Sbjct: 121 VPKTAENFRALCTGEKGFGYKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180

Query: 181 KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETD 240
           KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVK IE+QETD
Sbjct: 181 KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKQIEAQETD 240

Query: 241 RGDRPLKKVVISDCGEVPEA 261
           RGDRPLKKVVISDCGE+P A
Sbjct: 241 RGDRPLKKVVISDCGELPVA 259

[Close]

BLAST of Lcy05g008320 vs. NCBI nr
Match: XP_022148938.1 (photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Momordica charantia])

HSP 1 Score: 419.9 bits (1078), Expect = 1.7e-113
Identity = 215/262 (82.06%), Postives = 228/262 (87.02%), Query Frame = 0


Query: 1   MAAPFATTPLSKVGLVSGSNSVSQTRASGSCNSFKLHRVQLPSNLSASSSFLSGSLRFPS 60
           +AAPFAT PL            S TRAS  CNS KLHR QLP      ++FLSGSL FPS
Sbjct: 3   LAAPFATIPL------------SDTRASAPCNSLKLHRFQLP------AAFLSGSLHFPS 62

Query: 61  LRTSSNPLSSRSA--ARGSIRASAEVAPLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFG 120
           L+ SSNP SSR+A   R S+RASAE APLQAKVT+KVYFDVSIGNPVGKL GRIVIGLFG
Sbjct: 63  LKASSNPFSSRTAVPVRTSVRASAEAAPLQAKVTSKVYFDVSIGNPVGKLAGRIVIGLFG 122

Query: 121 DDVPQTAENFRALCTGEKGFGYKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDE 180
           DDVP+TAENFRALCTGEKGFG+KGSAFHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDE
Sbjct: 123 DDVPKTAENFRALCTGEKGFGFKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDE 182

Query: 181 NFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQE 240
           NFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGF+IVKLIESQ+
Sbjct: 183 NFKLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFEIVKLIESQD 242

Query: 241 TDRGDRPLKKVVISDCGEVPEA 261
           TDRGDRPLKKVVISDCGE+P A
Sbjct: 243 TDRGDRPLKKVVISDCGELPVA 246

[Close]

BLAST of Lcy05g008320 vs. NCBI nr
Match: XP_008459881.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 5, chloroplastic [Cucumis melo] >KAA0039834.1 photosynthetic NDH subunit of lumenal location 5 [Cucumis melo var. makuwa] >TYK24665.1 photosynthetic NDH subunit of lumenal location 5 [Cucumis melo var. makuwa])

HSP 1 Score: 414.5 bits (1064), Expect = 6.9e-112
Identity = 215/260 (82.69%), Postives = 227/260 (87.31%), Query Frame = 0


Query: 1   MAAPFATTPLSKVGLVSGSNSVSQTRASGSCNSFKLHRVQLPSNLSASSSFLSGSLRFPS 60
           MA+  AT PL  V   SGS+    T+A G  NS KLH ++LPS    SSSFLSGSL FPS
Sbjct: 1   MASSLATRPL--VAFASGSH----TKAWGPSNSVKLHMLRLPS----SSSFLSGSLHFPS 60

Query: 61  LRTSSNPLSSRSAARGSIRASAEVAPLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFGDD 120
           L TS NPLSSR + R  +RASAEV PLQAKVTNKVYFDVSIGNPVGKL GRIVIGLFGDD
Sbjct: 61  LTTSLNPLSSRISVRSFVRASAEVPPLQAKVTNKVYFDVSIGNPVGKLAGRIVIGLFGDD 120

Query: 121 VPQTAENFRALCTGEKGFGYKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180
           VP+TAENFRALCTGEKGFG+KGSAFHRVI+DFMIQGGDFDKGNGTGGKSIYGRTFKDENF
Sbjct: 121 VPKTAENFRALCTGEKGFGFKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENF 180

Query: 181 KLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETD 240
            LSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGF+ VKLIESQETD
Sbjct: 181 NLSHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFETVKLIESQETD 240

Query: 241 RGDRPLKKVVISDCGEVPEA 261
           RGDRPLKKVVISDCGE+P A
Sbjct: 241 RGDRPLKKVVISDCGELPVA 250

[Close]

BLAST of Lcy05g008320 vs. TAIR 10
Match: AT5G13120.1 (cyclophilin 20-2 )

HSP 1 Score: 323.9 bits (829), Expect = 1.1e-88
Identity = 164/229 (71.62%), Postives = 190/229 (82.97%), Query Frame = 0


Query: 33  SFKLHRVQLPSNLSASSS--FLSGSLRFPSLRTSSNPLSSRSAARGSIRASAE-VAPLQA 92
           SF+L       ++S SSS  F + SL    L TS    + R+    S++++AE V   Q+
Sbjct: 33  SFRLRTKSSFDSISFSSSTPFSASSL---LLHTS---YTKRNHRCFSVQSNAEVVTEPQS 92

Query: 93  KVTNKVYFDVSIGNPVGKLVGRIVIGLFGDDVPQTAENFRALCTGEKGFGYKGSAFHRVI 152
           K+T+KVYFD+S+GNPVGKL GRIVIGL+GDDVPQT ENFRALCTGEKGFGYKGS FHRVI
Sbjct: 93  KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 152

Query: 153 RDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTV 212
           RDFMIQGGDF+KGNGTGGKS+YGRTFKDENFKLSH GPGV+SMANAGPNTNGSQFFICT+
Sbjct: 153 RDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTI 212

Query: 213 KTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGEVP 259
           KT WLD RHVVFGQV+EG ++VKLIE QETDRGDRP KKVVI+DCG++P
Sbjct: 213 KTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQLP 255

[Close]

BLAST of Lcy05g008320 vs. TAIR 10
Match: AT5G13120.2 (cyclophilin 20-2 )

HSP 1 Score: 323.9 bits (829), Expect = 1.1e-88
Identity = 164/229 (71.62%), Postives = 190/229 (82.97%), Query Frame = 0


Query: 33  SFKLHRVQLPSNLSASSS--FLSGSLRFPSLRTSSNPLSSRSAARGSIRASAE-VAPLQA 92
           SF+L       ++S SSS  F + SL    L TS    + R+    S++++AE V   Q+
Sbjct: 29  SFRLRTKSSFDSISFSSSTPFSASSL---LLHTS---YTKRNHRCFSVQSNAEVVTEPQS 88

Query: 93  KVTNKVYFDVSIGNPVGKLVGRIVIGLFGDDVPQTAENFRALCTGEKGFGYKGSAFHRVI 152
           K+T+KVYFD+S+GNPVGKL GRIVIGL+GDDVPQT ENFRALCTGEKGFGYKGS FHRVI
Sbjct: 89  KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 148

Query: 153 RDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPGVVSMANAGPNTNGSQFFICTV 212
           RDFMIQGGDF+KGNGTGGKS+YGRTFKDENFKLSH GPGV+SMANAGPNTNGSQFFICT+
Sbjct: 149 RDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTI 208

Query: 213 KTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLKKVVISDCGEVP 259
           KT WLD RHVVFGQV+EG ++VKLIE QETDRGDRP KKVVI+DCG++P
Sbjct: 209 KTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQLP 251

[Close]

BLAST of Lcy05g008320 vs. TAIR 10
Match: AT3G62030.3 (rotamase CYP 4 )

HSP 1 Score: 261.5 bits (667), Expect = 7.0e-70
Identity = 141/250 (56.40%), Postives = 173/250 (69.20%), Query Frame = 0


Query: 10  LSKVGLVSGSNSVSQTRASGS-CNSFKLHRVQLPSNLSASSSFLSGSLRFPSLRTSSNPL 69
           ++++G    S  VS  R + S C   +   + L S L  +S     S  + + +      
Sbjct: 16  IAQIGFGVKSQLVSANRTTQSVCFGARSSGIALSSRLHYASPIKQFSGVYATTK------ 75

Query: 70  SSRSAARGSIRASAEVAPLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFGDDVPQTAENF 129
             R+A   S+ A  EV   QAKVTNKVYFDV IG   G++ GRIV+GLFG+ VP+T ENF
Sbjct: 76  HQRTACVKSMAAEEEVIEPQAKVTNKVYFDVEIG---GEVAGRIVMGLFGEVVPKTVENF 135

Query: 130 RALCTGEKGFGYKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGPG 189
           RALCTGEK +GYKGS+FHR+I+DFMIQGGDF +GNGTGG SIYG  F+DENF L HTGPG
Sbjct: 136 RALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPG 195

Query: 190 VVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLKK 249
           ++SMANAGPNTNGSQFFICTVKT WLD +HVVFGQV+EG  +V+ +ESQET   D P K 
Sbjct: 196 ILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKKG 255

Query: 250 VVISDCGEVP 259
             I  CGE+P
Sbjct: 256 CRIYACGELP 256

[Close]

BLAST of Lcy05g008320 vs. TAIR 10
Match: AT3G62030.1 (rotamase CYP 4 )

HSP 1 Score: 256.9 bits (655), Expect = 1.7e-68
Identity = 141/251 (56.18%), Postives = 173/251 (68.92%), Query Frame = 0


Query: 10  LSKVGLVSGSNSVSQTRASGS-CNSFKLHRVQLPSNLSASSSFLSGSLRFPSLRTSSNPL 69
           ++++G    S  VS  R + S C   +   + L S L  +S     S  + + +      
Sbjct: 16  IAQIGFGVKSQLVSANRTTQSVCFGARSSGIALSSRLHYASPIKQFSGVYATTK------ 75

Query: 70  SSRSAARGSIRA-SAEVAPLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFGDDVPQTAEN 129
             R+A   S+ A   EV   QAKVTNKVYFDV IG   G++ GRIV+GLFG+ VP+T EN
Sbjct: 76  HQRTACVKSMAAEEEEVIEPQAKVTNKVYFDVEIG---GEVAGRIVMGLFGEVVPKTVEN 135

Query: 130 FRALCTGEKGFGYKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGP 189
           FRALCTGEK +GYKGS+FHR+I+DFMIQGGDF +GNGTGG SIYG  F+DENF L HTGP
Sbjct: 136 FRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGP 195

Query: 190 GVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLK 249
           G++SMANAGPNTNGSQFFICTVKT WLD +HVVFGQV+EG  +V+ +ESQET   D P K
Sbjct: 196 GILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKK 255

Query: 250 KVVISDCGEVP 259
              I  CGE+P
Sbjct: 256 GCRIYACGELP 257

[Close]

BLAST of Lcy05g008320 vs. TAIR 10
Match: AT3G62030.2 (rotamase CYP 4 )

HSP 1 Score: 256.9 bits (655), Expect = 1.7e-68
Identity = 141/251 (56.18%), Postives = 173/251 (68.92%), Query Frame = 0


Query: 10  LSKVGLVSGSNSVSQTRASGS-CNSFKLHRVQLPSNLSASSSFLSGSLRFPSLRTSSNPL 69
           ++++G    S  VS  R + S C   +   + L S L  +S     S  + + +      
Sbjct: 69  IAQIGFGVKSQLVSANRTTQSVCFGARSSGIALSSRLHYASPIKQFSGVYATTK------ 128

Query: 70  SSRSAARGSIRA-SAEVAPLQAKVTNKVYFDVSIGNPVGKLVGRIVIGLFGDDVPQTAEN 129
             R+A   S+ A   EV   QAKVTNKVYFDV IG   G++ GRIV+GLFG+ VP+T EN
Sbjct: 129 HQRTACVKSMAAEEEEVIEPQAKVTNKVYFDVEIG---GEVAGRIVMGLFGEVVPKTVEN 188

Query: 130 FRALCTGEKGFGYKGSAFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHTGP 189
           FRALCTGEK +GYKGS+FHR+I+DFMIQGGDF +GNGTGG SIYG  F+DENF L HTGP
Sbjct: 189 FRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGP 248

Query: 190 GVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGFDIVKLIESQETDRGDRPLK 249
           G++SMANAGPNTNGSQFFICTVKT WLD +HVVFGQV+EG  +V+ +ESQET   D P K
Sbjct: 249 GILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKK 308

Query: 250 KVVISDCGEVP 259
              I  CGE+P
Sbjct: 309 GCRIYACGELP 310

The following BLAST results are available for this feature:

BLAST of Lcy05g008320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASS6	1.6e-87	71.62	Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis t...	[more]
P34791	2.4e-67	56.18	Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thalia...	[more]
Q01490	3.9e-65	67.82	Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) OX=50059 ...	[more]
Q41651	8.6e-65	62.50	Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba OX=3906 PE=1 SV...	[more]
P80311	1.6e-63	69.05	Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus OX=9913 GN=PPIB PE=1 SV=4	[more]

BLAST of Lcy05g008320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JQJ8	1.3e-127	90.38	Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111488028 ...	[more]
A0A6J1GQU2	2.0e-125	89.62	Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC11145663...	[more]
A0A6J1D5G4	8.0e-114	82.06	Peptidyl-prolyl cis-trans isomerase OS=Momordica charantia OX=3673 GN=LOC1110174...	[more]
A0A5D3DM20	3.4e-112	82.69	Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CBN7	3.4e-112	82.69	Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103498867 PE=3...	[more]

BLAST of Lcy05g008320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991375.1	2.6e-127	90.38	photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Cucurbita ...	[more]
XP_038875935.1	2.5e-125	89.62	photosynthetic NDH subunit of lumenal location 5, chloroplastic [Benincasa hispi...	[more]
XP_022954376.1	4.2e-125	89.62	photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Cucurbita ...	[more]
XP_022148938.1	1.7e-113	82.06	photosynthetic NDH subunit of lumenal location 5, chloroplastic-like [Momordica ...	[more]
XP_008459881.1	6.9e-112	82.69	PREDICTED: photosynthetic NDH subunit of lumenal location 5, chloroplastic [Cucu...	[more]

BLAST of Lcy05g008320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13120.1	1.1e-88	71.62	cyclophilin 20-2	[more]
AT5G13120.2	1.1e-88	71.62	cyclophilin 20-2	[more]
AT3G62030.3	7.0e-70	56.40	rotamase CYP 4	[more]
AT3G62030.1	1.7e-68	56.18	rotamase CYP 4	[more]
AT3G62030.2	1.7e-68	56.18	rotamase CYP 4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PRINTS	PR00153	CSAPPISMRASE	coord: 188..203 score: 79.26 coord: 203..215 score: 72.57 coord: 116..131 score: 64.39 coord: 216..231 score: 55.09 coord: 145..157 score: 78.12
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 109..255 e-value: 2.8E-49 score: 167.4
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50072	CSA_PPIASE_2	coord: 106..256 score: 44.197056
IPR029000	Cyclophilin-like domain superfamily	GENE3D	2.40.100.10		coord: 80..260 e-value: 3.6E-81 score: 273.3
IPR029000	Cyclophilin-like domain superfamily	SUPERFAMILY	50891	Cyclophilin-like	coord: 85..257
None	No IPR available	PANTHER	PTHR11071:SF471	PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 5, CHLOROPLASTIC	coord: 41..256
None	No IPR available	PANTHER	PTHR11071	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 41..256
None	No IPR available	CDD	cd01926	cyclophilin_ABH_like	coord: 94..255 e-value: 2.82067E-107 score: 305.335
IPR020892	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site	PROSITE	PS00170	CSA_PPIASE_1	coord: 140..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g008320.1	Lcy05g008320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016018	cyclosporin A binding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity