Lcy05g007690 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g007690
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Single-stranded DNA-binding protein
Location	Chr05: 7551230 .. 7556809 (-)
RNA-Seq Expression	Lcy05g007690
Synteny	Lcy05g007690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAATCTCCCTTCATCAAACCCTCGCCCCAACAGTCTGGCGCGCACAGAAACAGTCCAAGATAAGAGCGAAATCGAGAGTGATGATAATGGCGCTAGAGCAAACCCTAACTCTTTCGTCATCGTTGTTATCAAAAAACTCCATCTTCTCCATCCCTACAAACAAATTACAAATCGCTTCCCCATTTCTCTCCCATCAAAACGCTCCTAATAAACAGCTCCGATTCGCAACTCGTTTCCCAAAATGCTCGGCTATGGAAAACTACAGCAATTACTCTATAACCTACCCTAAACCTTCCGAAATTCCATGGAAGAAGGAGCTCAGTAACTCCGTGAGTCTCATCGGAACCGTTGGTATGCCTGTGGAGCTCAAGCACCTAGCATCCGGCAAGGATGTGGCTTGGACGCGACTCGCCGTGTGGAAGTCCTCTACTGAAACATCTTGGTACTTATCTGTTATTTCTTTTCGAAATGGGGTTTAGTATGGTTGCATTTCTGTAGAAGATTGAATGATAATGTGATTTTTTTTGGGTGAGGTGATGAAATTATGTGCAAATGTTGAAGATTAAGCTCTTGAGTAGTTAAAGATGAGATGTTAAGAATATGGAAATTTTAGGACCATGGTTCGTATAGACCTCATTTCTGTTTGCATAGGCTTGGGATTCCGAAATTGGTGTCCCAATTTCAGTAGGATGTAGAAACCATATCAATCTTCAAGTGAATGAACTTATTTCATATAAACGACGGCTTTCCGTGTTTAGACGCAAATGCCTCTGTTTGGGCATTGAGAGGGAGGATGTGTGGAATTTGTCACATTTCAGAATTCTTAACAATGAAAGCTTATTATTGTTATGTTATTTTGTAAACTTTGGCTCCTTTTTTGGGTCTGTCTTTTTTTATAGCTTTTGCTCTATACTTTACTTCTTTAATAAAAACTGGTTTTAAAGTTAAAAAAGAGTATGTTAATGTATAAAAAAAAAATAAAAAAAATTAACTGCTTTTCTGTCGTAGGAGTTTTACTTATTTCATTTTGCTGAATCTACCCTACTATAAAGCCAACTAATCAATTGTCATTTGAAGCAAATATTATATGCTAGCACATCCTATAATGATTTCATCCAAACCATCTCTAGACTCTGTGACCCATATCAGCAGCCTAATCGTTAGCCCTTTCACCTTATTTAACTAATTAATCATCCAACATTTTTGTAATTCTGTTATTTGTGTTAGCGGAATTTGGTAAGGTAATAGAGTAGCAATATGCTTGGTATGAAGTACTCTGGGTTGGCCTAATTGTCACTGGAACGAGTAAAAAAGTAAGAAGCCATTGGTAGTTCTTCCTACATGGGCATCTTTTACAAGGCCTTTCTCCACCCCTCTAGAAATCATTTTGCTCCAAATTTTAATCACTATAAATAAGAGGAAATGAGAAAGAGGGTCATCCTATCAAATTTTCCTTGTACTTGGCAGTTCACTCATTTTCCTATTCAAGGCCTTTGAGTTGATCTTATGAATACTCATTGCTAAACTGGTGGGGTCAAGCTTTAGACTTCTTGGGAATCAAACAGATGTGTCTCATTCAGCTGGTTGGTGGCCCTCCCAAGGACTCTTACATTCTTCTAAGTCTCTTTCTCTTGGGCCATTCTTCTGAAGACAAGAAGGAGAGCTTATGGAAGAATCTAGTTCATGCTCTTTTGTGGTTGGTGTGGTTAGAAAGAAATTAGGGGATTTTTGGATCTAAGGAAAATGCCTATGCTTTCTTTGCCTCTCTTTCACAAGTTCATCATCTACCTTTTTTTTATATATAAAAAATATATATATTTTTTTTAATTATTTTAATTTTTAATTTCATACATCAATTGAATTGTTTCTTTTTTCTTAAAAAAAATTGTACCTCTCTAAAGACATTTCAATTGTACCCTCTCAAAGATTGACATCCTTTAGGAGATTATGTTTGATAACCTCCTAACTCTCTAGAAAGATGATGTCAACAAGCCATCAAGATCAAGAGCTTTACAACCATCAAAACTAAAGGAAGATTCTTGTGGCAAGCCGACATGTTTGCGCTTTTATGAAACTTGTGGGGGGAAAGAAACAATAGGACTTTCAGGGGGATAGTTAGAAGTCTGGGTGATGTTTGGTCCCTTACTAGATACCATGTCTCCTTGTAGGCTTTGATCACGAAATTATTTTGTAATTATCCATTAGGTCTCATTTTGCTTGATTGGAGTCCCTTCCAGTGATAGGCCTCCCTTTTGTGGGCCAAGTTTTTTTTTTTTTTTGTATGCCCTTGTATTCTTTCATTTTTTTCTCAATGAAAAGTTGGTTTTTCATTTATTAAAAAAAAAAAAAACCCTCAAAACTAAAGATCACTTTCTTAATCTTCTCCAAAGTAAAAGGTTAATGGAGGTTTCTCCTTCCTTTTCACTAAAGAGGCAAAATAAGATAATACTTTAGCTTTGATCTTGTTGTCACTACCTAAACATCTCCCATCTTCAATAGTGATATCTGTCACTAATTAGATCCCTACCTCTCTAAAGTTTTCATATTATGTAAAAAAGGAGATTTTTTCTTTGATTCATTTCACACGGGATTTTTCCCTCCAACTAGCCTTCTCCCACTAAATAACCAACCACGACCCTTTTGGTCTACCCCTTTCTTCTCAACCTTAGTCATTAAGATTGCCTCTTTTAATCCAAATCATCCAAAGTGTCATGTTGATGATAATTTCTTCATTTGTCATCTTGTTAATAATCTCTTCTCTTGTGCACAACTTGATTATCCCCCAAAACATTCAAGTTCTACTCGTCTTTAATTTTTACCTTTTGAAATTGTCACTTAACTTGTCGGTGTTCTACCTCTTTAGAACTTGACGTGTCATCATGGTTCTGTCACACTATATTCTCGTTATCTAGAAATTTTCCATTGAGCCTTATAGATCTAGTCTCTCTACCTCCCTTTAATTTTTATGGAAAAAATCTAATGACATTAAAATCACCTGCAAAATACCAAGCTGCTTCACATAGTCTATAAATTTCCCAACAGAAAGGCTCCTCTTTCCCCGTCTAGACATGGCAGACCATAATTCTTGAAAGCTATCAAAGAAGTTTGTTGGAATACCAAAAGATGAATCATTAAAGAGAATGATCTAAGAACCACTTCCTGACACAAAATAGAACCAAAGTCCGGCTAGATAATAGTACCACCTGAAGAGCCCCATTCACCTTTGATTTCTTCCACCCCACCCACATCTTTTACCAAAACTTTTGACTAAACTAGCAGTGCAAGAAAAACGTTTGGTTTCTTGAAGAATACCCACCTCAGGCCTCTTCTGCAGCAAAACCTCCTTGATGAGCCTCCTTTTACTTACACCCCAATCCCTAAATTTCTAAGAGGAATCTTCATTAAGACGCTAGGGGGCTCAATGAAGACCCACCAATCTTAGCCAACAAATTTATTAAGTTGGACCACTCTACACTCTTCAAAAGACATATCTAACTGACCCGCCCATGTTGACATACCAGAAAGAAGCCTGGTGGTACTCTGGTATTAGTTAGTGAGCTAAGTCTTTCGAATATGTAGTTACTGTTTGTCACTTTGTTCTATCGCTTAGCATTTTTTTTTTGTTAATTTCCCTTTCAACTATTGGTTCCTATCTCATTTTTGTTTTCTAAGATAAGCAACTAGTTACATTAAGAGAGAGAGAGAGGGAAAAAGAAGAAGAAGAAATATGCATAACATTGTTGAAAGCCTCCTCACTTCTTTCAAGCCAAATTTCCCATGAAGTGCTTACTTTCACTCCTTTGCTCCGCAGAACTTTAAAACTCTGATCTAGAGGGACACGACATGGTATTTCAATCTTCATGTGTTCAAATGTAAAGACAATTAGGACTTAGGAGAGAAGGAATCAGATATAAAAAATAATTGCCTAATTTTCTTATCCTGATAATCTATGGAGTATGGATATAACTATCCAGATCAATATCTTGCTGGGATTTCCATTTGCCTATTCCAATATCCAGTCGGCCTTTTCAGGGTAAATTTAACATTCTGGGATGAATTGGCACATATTGCTTTTCAACACGTCCAGAAAGGCAACCAGATATATGTATCTGGCCGGCTGGTAGCAGATTTAGTTGAAGCTGATGATGGGAAACAGCAAACATACTATAAGGTTTTGTTGCCCTTGTTCACATTGTTCCATGGTTTTCTGCTCCTTTCCCGATGTAGACACTAATGTTCTCTATCTTTTGCAGGTAGTAGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCGACAGCACCCAATTATGACCAGGACTCTAGTTCTGTAGTGGCAGGTCTGGGATATTTTTGAATTTAAGACTATAGGTATGACACTGGATTTTGCTTCAGAATCTTGATATTTGGTGTGCTATCATATTCTTCGCAGGGAGAAAGCTCAGCAATGGTGCCGTTGATAATATGGGGTCAACACAAGAATTATGGCAAGCATTCTTTGCTAATCCCGTGGACTGGTGGGACAATAGGAAGAACAAGGTACTTGATTTATTCTCTTGCAAGATTCAAATATCTTGTTTTTGGATTCAATTGTTCTTAATATGGACCATCTTGTATTTGCTTGTGCTAGTATGCTTTACTTATATTATATTTTGCCAAGATGCATGAAAAAACCTTAGGAACTTACAACAAACTGCATGATATAATAACATACATTTTATGTATGTTATTACTTCTATTGCAGAGAGCAGACCTCTTGAATGGTTGCATTTTCTTATAAGAAACAGTTTCATAGATGGTATGTAATTATGAAAAAGGGAAAGTGGGAAGAGTCAAGTCTCGAGCCAACTGAGACTAAAAAAAATCTCTTCCAATTAGCTAAAAGAATATCTAAACTTTAATTGTTGAAAGAAGTATAAAAGCTAAACCGAGTAAGAGCAACACAGGAAAGTCATCAACAGACTTTATTTTAGTTATCGTGTCCAAATATTATTATTGATTGTACATATGAAATGGTGGGCCTCAATGATTAGAAAAAAGGATTAATAGCCTCATTTTGCTGGCCATTTTAGACATTCCAAAAGGTTACCTTTTGTAAGTATTTGTAGGTTTCTTTCACTATATGATTCACATGATTCCTTGATGAGAGATGATATTCTCACCTTAATGTTAATACATTGGTCTATTGATATTCTACTTGCAGAAGAACCCTAAATATCCAGATTTTAAGCACAAGGACACTGGGGAAGCCTTGTGGGTTGAGGGCAGGTACAATCCACCTTGGGTGAAGTCCCAGCTGGCAATATTGGATATGAGAATGGGTTCTCTTGATGAGCAGGAAGCCAAAATGGCCAACTTTGTAACTAATTTTGATTTCCCATCTTATTAGCCCCTGGCTGTGGATTCCTTTACATTGTTTTCAACAGGGTAATCATCAAATGTATTTGGAAAGATTCTTTTGTGGTGCCTGGTTTGTAAAGTTTGTAAATTAATGTGCTGTATATCAGATTGTTACTTGTTAGTAATTCAAATTTGTCTTCAGGCCCCTAGATTGATACCGTTTAAAGAATGGAAAAAAG

mRNA sequence

AAAAAATCTCCCTTCATCAAACCCTCGCCCCAACAGTCTGGCGCGCACAGAAACAGTCCAAGATAAGAGCGAAATCGAGAGTGATGATAATGGCGCTAGAGCAAACCCTAACTCTTTCGTCATCGTTGTTATCAAAAAACTCCATCTTCTCCATCCCTACAAACAAATTACAAATCGCTTCCCCATTTCTCTCCCATCAAAACGCTCCTAATAAACAGCTCCGATTCGCAACTCGTTTCCCAAAATGCTCGGCTATGGAAAACTACAGCAATTACTCTATAACCTACCCTAAACCTTCCGAAATTCCATGGAAGAAGGAGCTCAGTAACTCCGTGAGTCTCATCGGAACCGTTGGTATGCCTGTGGAGCTCAAGCACCTAGCATCCGGCAAGGATGTGGCTTGGACGCGACTCGCCGTGTGGAAGTCCTCTACTGAAACATCTTGGGTAAATTTAACATTCTGGGATGAATTGGCACATATTGCTTTTCAACACGTCCAGAAAGGCAACCAGATATATGTATCTGGCCGGCTGGTAGCAGATTTAGTTGAAGCTGATGATGGGAAACAGCAAACATACTATAAGGTAGTAGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCGACAGCACCCAATTATGACCAGGACTCTAGTTCTGTAGTGGCAGGGAGAAAGCTCAGCAATGGTGCCGTTGATAATATGGGGTCAACACAAGAATTATGGCAAGCATTCTTTGCTAATCCCGTGGACTGGTGGGACAATAGGAAGAACAAGAAGAACCCTAAATATCCAGATTTTAAGCACAAGGACACTGGGGAAGCCTTGTGGGTTGAGGGCAGGTACAATCCACCTTGGGTGAAGTCCCAGCTGGCAATATTGGATATGAGAATGGGTTCTCTTGATGAGCAGGAAGCCAAAATGGCCAACTTTGTAACTAATTTTGATTTCCCATCTTATTAGCCCCTGGCTGTGGATTCCTTTACATTGTTTTCAACAGGGTAATCATCAAATGTATTTGGAAAGATTCTTTTGTGGTGCCTGGTTTGTAAAGTTTGTAAATTAATGTGCTGTATATCAGATTGTTACTTGTTAGTAATTCAAATTTGTCTTCAGGCCCCTAGATTGATACCGTTTAAAGAATGGAAAAAAG

Coding sequence (CDS)

ATGATAATGGCGCTAGAGCAAACCCTAACTCTTTCGTCATCGTTGTTATCAAAAAACTCCATCTTCTCCATCCCTACAAACAAATTACAAATCGCTTCCCCATTTCTCTCCCATCAAAACGCTCCTAATAAACAGCTCCGATTCGCAACTCGTTTCCCAAAATGCTCGGCTATGGAAAACTACAGCAATTACTCTATAACCTACCCTAAACCTTCCGAAATTCCATGGAAGAAGGAGCTCAGTAACTCCGTGAGTCTCATCGGAACCGTTGGTATGCCTGTGGAGCTCAAGCACCTAGCATCCGGCAAGGATGTGGCTTGGACGCGACTCGCCGTGTGGAAGTCCTCTACTGAAACATCTTGGGTAAATTTAACATTCTGGGATGAATTGGCACATATTGCTTTTCAACACGTCCAGAAAGGCAACCAGATATATGTATCTGGCCGGCTGGTAGCAGATTTAGTTGAAGCTGATGATGGGAAACAGCAAACATACTATAAGGTAGTAGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCGACAGCACCCAATTATGACCAGGACTCTAGTTCTGTAGTGGCAGGGAGAAAGCTCAGCAATGGTGCCGTTGATAATATGGGGTCAACACAAGAATTATGGCAAGCATTCTTTGCTAATCCCGTGGACTGGTGGGACAATAGGAAGAACAAGAAGAACCCTAAATATCCAGATTTTAAGCACAAGGACACTGGGGAAGCCTTGTGGGTTGAGGGCAGGTACAATCCACCTTGGGTGAAGTCCCAGCTGGCAATATTGGATATGAGAATGGGTTCTCTTGATGAGCAGGAAGCCAAAATGGCCAACTTTGTAACTAATTTTGATTTCCCATCTTATTAG

Protein sequence

MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIASPFLSHQNAPNKQLRFATRFPKCSAMENYSNYSITYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETSWVNLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY

Homology

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BLAST of Lcy05g007690 vs. ExPASy Swiss-Prot
Match: Q9SX99 (Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.0e-26
Identity = 73/217 (33.64%), Postives = 112/217 (51.61%), Query Frame = 0


Query: 68  YPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWK--SSTETSWVNLT 127
           + KP     K  L NSVSL+G V   +++ +    +   +T L V    +   +  ++L 
Sbjct: 42  FKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLR 101

Query: 128 FWDELAHIAFQHVQKGNQIYVSGRLVADLVEADD--GKQQTYYKVVVQQLNFIERSNSTA 187
            WD +A     H++  + I VSGRL +    + D        Y+V V ++N++    +  
Sbjct: 102 MWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYV----AAP 161

Query: 188 PNYDQDSS-SVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHK 247
           P++  DS  S     K  +   ++      LWQ FF+NP DWWDNR+NKKNPK PDFKHK
Sbjct: 162 PSHVLDSQISKNPKTKTEDDIEESKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKHK 221

Query: 248 DTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAK 280
           DTGEALW+     P W+  +L + D +    DE++ +
Sbjct: 222 DTGEALWLCSDL-PDWITRRLELFDQKNRFYDEEKTR 253

[Close]

BLAST of Lcy05g007690 vs. ExPASy Swiss-Prot
Match: Q8GXH3 (Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 7.8e-22
Identity = 71/209 (33.97%), Postives = 111/209 (53.11%), Query Frame = 0


Query: 69  PKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS-WVNLTFW 128
           P+P+EI ++ E++N V+LIG V  PV+ +  + GK  A T ++   +S  +  W+ + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 129 DELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE-RSNSTAPNY 188
            +LA  A ++V K +QI+VSG+L  D    +    Q   +V+VQ LNFI+  S S +P  
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 189 DQDSS-SVVAGRKLSNGAVDN---MGSTQELWQAFFANPVDWWDNRKNKKN----PKYPD 248
              SS    +G K           +    + W     NP +WWD+R+NK N    P++PD
Sbjct: 206 VMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPD 265

Query: 249 FKHKDTGEALWVEGRYNPPWVKSQLAILD 268
           FK KD+  +LW+     P WV  +L  L+
Sbjct: 266 FKSKDSSFSLWLNKA--PNWVLPKLEGLE 292

[Close]

BLAST of Lcy05g007690 vs. ExPASy Swiss-Prot
Match: Q8GWJ4 (Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB3 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.9e-20
Identity = 68/203 (33.50%), Postives = 103/203 (50.74%), Query Frame = 0


Query: 71  PSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS-WVNLTFWDE 130
           P +I +K E+SN ++LIG V  PV+    + GK  A T ++    S  ++ W+ + F  +
Sbjct: 71  PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130

Query: 131 LAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSNSTA-----P 190
           LA IA QHV+K ++I+VSG+L  D    +    Q+  +V+VQ LNF++ + ST      P
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190

Query: 191 NYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKN----PKYPDFK 250
             +  S      R      +D    T   W+    NP +W D+R NK N    P +PDFK
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDE--ETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFK 250

Query: 251 HKDTGEALWVEGRYNPPWVKSQL 264
            K  G +LW+     P W   +L
Sbjct: 251 MKVGGLSLWLSTA--PDWALLKL 269

[Close]

BLAST of Lcy05g007690 vs. ExPASy Swiss-Prot
Match: Q9FYJ2 (Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.7e-19
Identity = 62/216 (28.70%), Postives = 110/216 (50.93%), Query Frame = 0


Query: 68  YPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS------- 127
           +P+P E+P++ +++NS+ LIG V  PV+      GK  A T ++   SS   S       
Sbjct: 59  WPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESDSSSN 118

Query: 128 -WVNLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTY------------YK 187
            W+ + F  +LAH A  +++K ++++++G+++ D++++     Q +            ++
Sbjct: 119 FWIPVLFEGDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSFSHQ 178

Query: 188 VVVQQLNFIERSNS---TAPNYDQD------SSSVVAGRKLSNGAVDNMGSTQELWQAFF 247
           V+V+ L++IE S +     P  DQ+      S+SV  GR+              LW    
Sbjct: 179 VMVRDLHYIEGSKAMPKVLPTLDQNEGVLKHSASVQRGREFGT----------NLWFDLV 238

Query: 248 ANPVDWWDNRKNKK----NPKYPDFKHKDTGEALWV 251
             P +W D R+ K+    NPK+PDFK KD  +ALW+
Sbjct: 239 DKPNEWCDYREMKQNGSVNPKHPDFKKKDGSQALWL 264

[Close]

BLAST of Lcy05g007690 vs. ExPASy Swiss-Prot
Match: Q9KUW2 (Single-stranded DNA-binding protein OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=ssb PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.1e-07
Identity = 32/104 (30.77%), Postives = 55/104 (52.88%), Query Frame = 0


Query: 82  NSVSLIGTVGMPVELKHLASGKDVA---------WTRLAVWKSSTETSWVNLTFWDELAH 141
           N V LIG +G   E++++ SG  VA         W   A  +   +T W  +T + +LA 
Sbjct: 7   NKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTEWHRVTLYGKLAE 66

Query: 142 IAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI 177
           +A ++++KG+Q+Y+ G+L     +   G+ +   +VVVQ  N I
Sbjct: 67  VAGEYLRKGSQVYIEGQLQTRKWQDQSGQDRYSTEVVVQGYNGI 110

[Close]

BLAST of Lcy05g007690 vs. ExPASy TrEMBL
Match: A0A1S3BRV3 (protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 1.1e-143
Identity = 256/295 (86.78%), Postives = 275/295 (93.22%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAM 60
           M +ALEQTLTLSSS  SKNSIFSIP N+L+I+S  PF S+ N P K LRFATRFPKCSAM
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPP-KHLRFATRFPKCSAM 62

Query: 61  ENYSNYS-ITYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSST 120
           ENY+NYS +TYPKPSEIPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSST
Sbjct: 63  ENYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSST 122

Query: 121 ETSWVNLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 180
           ETSW++LTFWDELAHIA QHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE
Sbjct: 123 ETSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 182

Query: 181 RSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYP 240
           RSNSTAP+YDQDS+S++AGRK S+GAVDN  STQELWQAFFANPVDWWDNRKNKKNPKYP
Sbjct: 183 RSNSTAPHYDQDSNSIMAGRKPSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKNPKYP 242

Query: 241 DFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 293
           DFKHKDTGEALWVEGRYNPPWVKSQLA+LDMRM SLD+QE KM NFV+NFDFPSY
Sbjct: 243 DFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of Lcy05g007690 vs. ExPASy TrEMBL
Match: A0A0A0K4W2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.4e-143
Identity = 256/295 (86.78%), Postives = 274/295 (92.88%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAM 60
           M+MALEQTL LSSSL SKNSIFSIP N+L I+S  PF S+ N P K LRF   FPKCSAM
Sbjct: 1   MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPP-KHLRFPAPFPKCSAM 60

Query: 61  ENYSNYS-ITYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSST 120
           ENY+NYS +TYPKPS+IPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSST
Sbjct: 61  ENYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSST 120

Query: 121 ETSWVNLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 180
           ETSW+ LTFWDELAHIA QHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE
Sbjct: 121 ETSWIGLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 180

Query: 181 RSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYP 240
           RSNSTAP+YDQDS+S++AGRK  +GAVDN GSTQELWQAFFANPVDWWDNRKNKKNPKYP
Sbjct: 181 RSNSTAPHYDQDSNSIMAGRKPGSGAVDNTGSTQELWQAFFANPVDWWDNRKNKKNPKYP 240

Query: 241 DFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 293
           DFKHKDTGEALWVEGRYNPPWVKSQLA+LDMRMGSLD+QEAKMANFVT+FDFPSY
Sbjct: 241 DFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMGSLDDQEAKMANFVTSFDFPSY 294

[Close]

BLAST of Lcy05g007690 vs. ExPASy TrEMBL
Match: A0A5D3DR47 (Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 4.1e-143
Identity = 255/295 (86.44%), Postives = 275/295 (93.22%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAM 60
           M +ALEQTLTLSSS  SKNSIFSIP N+L+I+S  PF S+ N P K LRFATRFPKCSAM
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPP-KHLRFATRFPKCSAM 62

Query: 61  ENYSNYS-ITYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSST 120
           ENY+NYS +TYPKPSEIPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSST
Sbjct: 63  ENYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSST 122

Query: 121 ETSWVNLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 180
           ETSW++LTFWDELAHIA QHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE
Sbjct: 123 ETSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 182

Query: 181 RSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYP 240
           RSNSTAP+YDQDS+S++AGRK S+GAVDN  STQELWQAFFANPVDWWDNRKNKK+PKYP
Sbjct: 183 RSNSTAPHYDQDSNSIMAGRKPSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKSPKYP 242

Query: 241 DFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 293
           DFKHKDTGEALWVEGRYNPPWVKSQLA+LDMRM SLD+QE KM NFV+NFDFPSY
Sbjct: 243 DFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of Lcy05g007690 vs. ExPASy TrEMBL
Match: A0A6J1DQC6 (protein OSB2, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022838 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 4.1e-143
Identity = 254/292 (86.99%), Postives = 273/292 (93.49%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIASPFLSHQNAPNKQLRFATRFPKCSAMEN 60
           M+MALEQTL+LSSSLL K+++ SIP N+ +IAS  LSH +A  K+LRFA RFPKCSAMEN
Sbjct: 1   MVMALEQTLSLSSSLLPKHTLLSIPRNRFRIAS--LSHLDAA-KRLRFARRFPKCSAMEN 60

Query: 61  YSNYSITYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS 120
           +SNYS +Y KP EIPW KELSNSVSLIGTVG PVE+KHLASGKDVAWTRLAVWKSSTETS
Sbjct: 61  FSNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSSTETS 120

Query: 121 WVNLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSN 180
           W+NLTFWDELAHIAFQHVQKGNQI+VSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS 
Sbjct: 121 WINLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSI 180

Query: 181 STAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFK 240
           STAP++DQDS+S+VAGRKL NGA DNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFK
Sbjct: 181 STAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFK 240

Query: 241 HKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 293
           HKDTGEALWVEGRYNPPWVKSQLA+LDMRMGSLDEQEAKMANFVTN DFPSY
Sbjct: 241 HKDTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMANFVTNLDFPSY 289

[Close]

BLAST of Lcy05g007690 vs. ExPASy TrEMBL
Match: A0A6J1DNW7 (protein OSB2, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022838 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 3.0e-141
Identity = 253/292 (86.64%), Postives = 272/292 (93.15%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIASPFLSHQNAPNKQLRFATRFPKCSAMEN 60
           M+MALEQTL+LSSSLL K+++ SIP N+ +IAS  LSH +A  K+LRFA RFPKCSAMEN
Sbjct: 1   MVMALEQTLSLSSSLLPKHTLLSIPRNRFRIAS--LSHLDAA-KRLRFARRFPKCSAMEN 60

Query: 61  YSNYSITYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS 120
           +SNYS +Y KP EIPW KELSNSVSLIGTVG PVE+KHLASGKDVAWTRLAVWKSSTETS
Sbjct: 61  FSNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSSTETS 120

Query: 121 WVNLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSN 180
           W+NLTFWDELAHIAFQHVQKGNQI+VSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS 
Sbjct: 121 WINLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSI 180

Query: 181 STAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFK 240
           STAP++DQDS+S+VAGRKL NGA DNMGSTQELWQAFFANPVDWWDNRKN KNPKYPDFK
Sbjct: 181 STAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKN-KNPKYPDFK 240

Query: 241 HKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 293
           HKDTGEALWVEGRYNPPWVKSQLA+LDMRMGSLDEQEAKMANFVTN DFPSY
Sbjct: 241 HKDTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMANFVTNLDFPSY 288

[Close]

BLAST of Lcy05g007690 vs. NCBI nr
Match: XP_038896738.1 (protein OSB2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 540.4 bits (1391), Expect = 9.4e-150
Identity = 265/294 (90.14%), Postives = 282/294 (95.92%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAM 60
           MIMALEQTLTLSSSLLSKNSIFSIP N+L+I+S  PFLS  NAP K LRFATRFPKCSAM
Sbjct: 1   MIMALEQTLTLSSSLLSKNSIFSIPRNELRISSFYPFLSGLNAP-KHLRFATRFPKCSAM 60

Query: 61  ENYSNYSITYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTE 120
           ENYS+YS TYPKPSEIPWKK+LSNSVSLIGTVGMPVELKHLA+GKDVAWTRLAVWKSSTE
Sbjct: 61  ENYSSYSPTYPKPSEIPWKKDLSNSVSLIGTVGMPVELKHLATGKDVAWTRLAVWKSSTE 120

Query: 121 TSWVNLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 180
           TSW+NLTFWDELAH+A QH+QKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER
Sbjct: 121 TSWINLTFWDELAHVASQHIQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 180

Query: 181 SNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPD 240
           SNST P+YDQDS+SV+AG+KL +GAVDN+GSTQELWQAFFANPVDWWDNRKNKKNPKYPD
Sbjct: 181 SNSTGPHYDQDSNSVMAGKKLGSGAVDNVGSTQELWQAFFANPVDWWDNRKNKKNPKYPD 240

Query: 241 FKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 293
           FKHKDTGEALWVEGRYNPPWVKSQLA+LDMRM SLD+QEAKMANFVTNFDFPSY
Sbjct: 241 FKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEAKMANFVTNFDFPSY 293

[Close]

BLAST of Lcy05g007690 vs. NCBI nr
Match: XP_008451268.1 (PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 519.2 bits (1336), Expect = 2.2e-143
Identity = 256/295 (86.78%), Postives = 275/295 (93.22%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAM 60
           M +ALEQTLTLSSS  SKNSIFSIP N+L+I+S  PF S+ N P K LRFATRFPKCSAM
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPP-KHLRFATRFPKCSAM 62

Query: 61  ENYSNYS-ITYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSST 120
           ENY+NYS +TYPKPSEIPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSST
Sbjct: 63  ENYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSST 122

Query: 121 ETSWVNLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 180
           ETSW++LTFWDELAHIA QHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE
Sbjct: 123 ETSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 182

Query: 181 RSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYP 240
           RSNSTAP+YDQDS+S++AGRK S+GAVDN  STQELWQAFFANPVDWWDNRKNKKNPKYP
Sbjct: 183 RSNSTAPHYDQDSNSIMAGRKPSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKNPKYP 242

Query: 241 DFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 293
           DFKHKDTGEALWVEGRYNPPWVKSQLA+LDMRM SLD+QE KM NFV+NFDFPSY
Sbjct: 243 DFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of Lcy05g007690 vs. NCBI nr
Match: XP_004146958.1 (protein OSB2, chloroplastic isoform X1 [Cucumis sativus] >KGN44765.1 hypothetical protein Csa_016591 [Cucumis sativus])

HSP 1 Score: 518.1 bits (1333), Expect = 5.0e-143
Identity = 256/295 (86.78%), Postives = 274/295 (92.88%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAM 60
           M+MALEQTL LSSSL SKNSIFSIP N+L I+S  PF S+ N P K LRF   FPKCSAM
Sbjct: 1   MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPP-KHLRFPAPFPKCSAM 60

Query: 61  ENYSNYS-ITYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSST 120
           ENY+NYS +TYPKPS+IPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSST
Sbjct: 61  ENYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSST 120

Query: 121 ETSWVNLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 180
           ETSW+ LTFWDELAHIA QHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE
Sbjct: 121 ETSWIGLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 180

Query: 181 RSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYP 240
           RSNSTAP+YDQDS+S++AGRK  +GAVDN GSTQELWQAFFANPVDWWDNRKNKKNPKYP
Sbjct: 181 RSNSTAPHYDQDSNSIMAGRKPGSGAVDNTGSTQELWQAFFANPVDWWDNRKNKKNPKYP 240

Query: 241 DFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 293
           DFKHKDTGEALWVEGRYNPPWVKSQLA+LDMRMGSLD+QEAKMANFVT+FDFPSY
Sbjct: 241 DFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMGSLDDQEAKMANFVTSFDFPSY 294

[Close]

BLAST of Lcy05g007690 vs. NCBI nr
Match: KAA0059696.1 (protein OSB2 [Cucumis melo var. makuwa] >TYK26133.1 protein OSB2 [Cucumis melo var. makuwa])

HSP 1 Score: 517.3 bits (1331), Expect = 8.5e-143
Identity = 255/295 (86.44%), Postives = 275/295 (93.22%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIAS--PFLSHQNAPNKQLRFATRFPKCSAM 60
           M +ALEQTLTLSSS  SKNSIFSIP N+L+I+S  PF S+ N P K LRFATRFPKCSAM
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPP-KHLRFATRFPKCSAM 62

Query: 61  ENYSNYS-ITYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSST 120
           ENY+NYS +TYPKPSEIPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSST
Sbjct: 63  ENYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSST 122

Query: 121 ETSWVNLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 180
           ETSW++LTFWDELAHIA QHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE
Sbjct: 123 ETSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE 182

Query: 181 RSNSTAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYP 240
           RSNSTAP+YDQDS+S++AGRK S+GAVDN  STQELWQAFFANPVDWWDNRKNKK+PKYP
Sbjct: 183 RSNSTAPHYDQDSNSIMAGRKPSSGAVDNTASTQELWQAFFANPVDWWDNRKNKKSPKYP 242

Query: 241 DFKHKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 293
           DFKHKDTGEALWVEGRYNPPWVKSQLA+LDMRM SLD+QE KM NFV+NFDFPSY
Sbjct: 243 DFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of Lcy05g007690 vs. NCBI nr
Match: XP_022155802.1 (protein OSB2, chloroplastic-like isoform X1 [Momordica charantia])

HSP 1 Score: 517.3 bits (1331), Expect = 8.5e-143
Identity = 254/292 (86.99%), Postives = 273/292 (93.49%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSIPTNKLQIASPFLSHQNAPNKQLRFATRFPKCSAMEN 60
           M+MALEQTL+LSSSLL K+++ SIP N+ +IAS  LSH +A  K+LRFA RFPKCSAMEN
Sbjct: 1   MVMALEQTLSLSSSLLPKHTLLSIPRNRFRIAS--LSHLDAA-KRLRFARRFPKCSAMEN 60

Query: 61  YSNYSITYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS 120
           +SNYS +Y KP EIPW KELSNSVSLIGTVG PVE+KHLASGKDVAWTRLAVWKSSTETS
Sbjct: 61  FSNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSSTETS 120

Query: 121 WVNLTFWDELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSN 180
           W+NLTFWDELAHIAFQHVQKGNQI+VSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS 
Sbjct: 121 WINLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSI 180

Query: 181 STAPNYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFK 240
           STAP++DQDS+S+VAGRKL NGA DNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFK
Sbjct: 181 STAPHHDQDSNSIVAGRKLGNGAADNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFK 240

Query: 241 HKDTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAKMANFVTNFDFPSY 293
           HKDTGEALWVEGRYNPPWVKSQLA+LDMRMGSLDEQEAKMANFVTN DFPSY
Sbjct: 241 HKDTGEALWVEGRYNPPWVKSQLAVLDMRMGSLDEQEAKMANFVTNLDFPSY 289

[Close]

BLAST of Lcy05g007690 vs. TAIR 10
Match: AT1G47720.1 (Primosome PriB/single-strand DNA-binding )

HSP 1 Score: 120.2 bits (300), Expect = 2.8e-27
Identity = 73/217 (33.64%), Postives = 112/217 (51.61%), Query Frame = 0


Query: 68  YPKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWK--SSTETSWVNLT 127
           + KP     K  L NSVSL+G V   +++ +    +   +T L V    +   +  ++L 
Sbjct: 42  FKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLR 101

Query: 128 FWDELAHIAFQHVQKGNQIYVSGRLVADLVEADD--GKQQTYYKVVVQQLNFIERSNSTA 187
            WD +A     H++  + I VSGRL +    + D        Y+V V ++N++    +  
Sbjct: 102 MWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYV----AAP 161

Query: 188 PNYDQDSS-SVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHK 247
           P++  DS  S     K  +   ++      LWQ FF+NP DWWDNR+NKKNPK PDFKHK
Sbjct: 162 PSHVLDSQISKNPKTKTEDDIEESKKDEIYLWQVFFSNPYDWWDNRRNKKNPKQPDFKHK 221

Query: 248 DTGEALWVEGRYNPPWVKSQLAILDMRMGSLDEQEAK 280
           DTGEALW+     P W+  +L + D +    DE++ +
Sbjct: 222 DTGEALWLCSDL-PDWITRRLELFDQKNRFYDEEKTR 253

[Close]

BLAST of Lcy05g007690 vs. TAIR 10
Match: AT4G20010.2 (plastid transcriptionally active 9 )

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-23
Identity = 72/209 (34.45%), Postives = 112/209 (53.59%), Query Frame = 0


Query: 69  PKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS-WVNLTFW 128
           P+P+EI ++ E++N V+LIG V  PV+ +  + GK  A T ++   +S  +  W+ + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 129 DELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE-RSNSTAPNY 188
            +LA  A ++V K +QI+VSG+L  D    +    Q   +V+VQ LNFI+  S S +P  
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 189 DQDSS-SVVAGRKLSNGAVDN---MGSTQELWQAFFANPVDWWDNRKNKKN----PKYPD 248
              SS    +G K   G       +    + W     NP +WWD+R+NK N    P++PD
Sbjct: 206 VMSSSEKEESGIKKQPGIAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPD 265

Query: 249 FKHKDTGEALWVEGRYNPPWVKSQLAILD 268
           FK KD+  +LW+     P WV  +L  L+
Sbjct: 266 FKSKDSSFSLWLNKA--PNWVLPKLEGLE 292

[Close]

BLAST of Lcy05g007690 vs. TAIR 10
Match: AT4G20010.1 (plastid transcriptionally active 9 )

HSP 1 Score: 105.9 bits (263), Expect = 5.5e-23
Identity = 71/209 (33.97%), Postives = 111/209 (53.11%), Query Frame = 0


Query: 69  PKPSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS-WVNLTFW 128
           P+P+EI ++ E++N V+LIG V  PV+ +  + GK  A T ++   +S  +  W+ + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 129 DELAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE-RSNSTAPNY 188
            +LA  A ++V K +QI+VSG+L  D    +    Q   +V+VQ LNFI+  S S +P  
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 189 DQDSS-SVVAGRKLSNGAVDN---MGSTQELWQAFFANPVDWWDNRKNKKN----PKYPD 248
              SS    +G K           +    + W     NP +WWD+R+NK N    P++PD
Sbjct: 206 VMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPD 265

Query: 249 FKHKDTGEALWVEGRYNPPWVKSQLAILD 268
           FK KD+  +LW+     P WV  +L  L+
Sbjct: 266 FKSKDSSFSLWLNKA--PNWVLPKLEGLE 292

[Close]

BLAST of Lcy05g007690 vs. TAIR 10
Match: AT5G44785.2 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-21
Identity = 68/203 (33.50%), Postives = 103/203 (50.74%), Query Frame = 0


Query: 71  PSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS-WVNLTFWDE 130
           P +I +K E+SN ++LIG V  PV+    + GK  A T ++    S  ++ W+ + F  +
Sbjct: 71  PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130

Query: 131 LAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSNSTA-----P 190
           LA IA QHV+K ++I+VSG+L  D    +    Q+  +V+VQ LNF++ + ST      P
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190

Query: 191 NYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKN----PKYPDFK 250
             +  S      R      +D    T   W+    NP +W D+R NK N    P +PDFK
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDE--ETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFK 250

Query: 251 HKDTGEALWVEGRYNPPWVKSQL 264
            K  G +LW+     P W   +L
Sbjct: 251 MKVGGLSLWLSTA--PDWALLKL 269

[Close]

BLAST of Lcy05g007690 vs. TAIR 10
Match: AT5G44785.1 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-21
Identity = 68/203 (33.50%), Postives = 103/203 (50.74%), Query Frame = 0


Query: 71  PSEIPWKKELSNSVSLIGTVGMPVELKHLASGKDVAWTRLAVWKSSTETS-WVNLTFWDE 130
           P +I +K E+SN ++LIG V  PV+    + GK  A T ++    S  ++ W+ + F  +
Sbjct: 71  PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130

Query: 131 LAHIAFQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSNSTA-----P 190
           LA IA QHV+K ++I+VSG+L  D    +    Q+  +V+VQ LNF++ + ST      P
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190

Query: 191 NYDQDSSSVVAGRKLSNGAVDNMGSTQELWQAFFANPVDWWDNRKNKKN----PKYPDFK 250
             +  S      R      +D    T   W+    NP +W D+R NK N    P +PDFK
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDE--ETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFK 250

Query: 251 HKDTGEALWVEGRYNPPWVKSQL 264
            K  G +LW+     P W   +L
Sbjct: 251 MKVGGLSLWLSTA--PDWALLKL 269

The following BLAST results are available for this feature:

BLAST of Lcy05g007690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX99	4.0e-26	33.64	Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1	[more]
Q8GXH3	7.8e-22	33.97	Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2	[more]
Q8GWJ4	1.9e-20	33.50	Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB...	[more]
Q9FYJ2	4.7e-19	28.70	Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1	[more]
Q9KUW2	4.1e-07	30.77	Single-stranded DNA-binding protein OS=Vibrio cholerae serotype O1 (strain ATCC ...	[more]

BLAST of Lcy05g007690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BRV3	1.1e-143	86.78	protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV...	[more]
A0A0A0K4W2	2.4e-143	86.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1	[more]
A0A5D3DR47	4.1e-143	86.44	Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 P...	[more]
A0A6J1DQC6	4.1e-143	86.99	protein OSB2, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1DNW7	3.0e-141	86.64	protein OSB2, chloroplastic-like isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of Lcy05g007690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896738.1	9.4e-150	90.14	protein OSB2, chloroplastic-like [Benincasa hispida]	[more]
XP_008451268.1	2.2e-143	86.78	PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo]	[more]
XP_004146958.1	5.0e-143	86.78	protein OSB2, chloroplastic isoform X1 [Cucumis sativus] >KGN44765.1 hypothetica...	[more]
KAA0059696.1	8.5e-143	86.44	protein OSB2 [Cucumis melo var. makuwa] >TYK26133.1 protein OSB2 [Cucumis melo v...	[more]
XP_022155802.1	8.5e-143	86.99	protein OSB2, chloroplastic-like isoform X1 [Momordica charantia]	[more]

BLAST of Lcy05g007690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47720.1	2.8e-27	33.64	Primosome PriB/single-strand DNA-binding	[more]
AT4G20010.2	1.1e-23	34.45	plastid transcriptionally active 9	[more]
AT4G20010.1	5.5e-23	33.97	plastid transcriptionally active 9	[more]
AT5G44785.2	1.4e-21	33.50	organellar single-stranded DNA binding protein 3	[more]
AT5G44785.1	1.4e-21	33.50	organellar single-stranded DNA binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011344	Single-stranded DNA-binding protein	TIGRFAM	TIGR00621	TIGR00621	coord: 82..187 e-value: 5.0E-16 score: 57.4
IPR011344	Single-stranded DNA-binding protein	PANTHER	PTHR10302	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 23..284
None	No IPR available	GENE3D	2.40.50.140		coord: 78..186 e-value: 6.1E-21 score: 76.6
None	No IPR available	PANTHER	PTHR10302:SF15	OS03G0633900 PROTEIN	coord: 23..284
IPR000424	Primosome PriB/single-strand DNA-binding	PFAM	PF00436	SSB	coord: 82..175 e-value: 2.7E-16 score: 59.5
IPR000424	Primosome PriB/single-strand DNA-binding	PROSITE	PS50935	SSB	coord: 80..177 score: 21.135189
IPR000424	Primosome PriB/single-strand DNA-binding	CDD	cd04496	SSB_OBF	coord: 84..176 e-value: 1.70832E-18 score: 76.8821
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 82..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g007690.1	Lcy05g007690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006264	mitochondrial DNA replication
biological_process	GO:0051096	positive regulation of helicase activity
biological_process	GO:0006260	DNA replication
cellular_component	GO:0042645	mitochondrial nucleoid
molecular_function	GO:0003697	single-stranded DNA binding