Lcy05g006290 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g006290
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Mitochondrial transcription termination factor family protein
Location	Chr05: 5892267 .. 5893436 (-)
RNA-Seq Expression	Lcy05g006290
Synteny	Lcy05g006290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCAGAACTTCCATGGCCTCCGCCTCAGATTCCACTTCTTCGCTCCTCTCCGTTCCTTCCTCCCCAAAACCCCTTTACCTCTTCACAGAAATCAAACCATTTTCAGACCTATTACCTCCAAATTCTCATCAGAACATCACTCCTTCACCATCTCTTACCTCATTGACACCTGCGGATTGCTGCCGGAAACCGCCATTGCTGCATCCGAGAAGGTCCAGCTTCACAACCGCGAAAGGCCCGACTCCGTCTTGGCGCTTCTCAAGAGCCATGGTTTCTCCAAATCGCAGCTCTCCAAGCTCATCCGTAAACGCCCGTCTCTTCTCCTCTCCAACGCCAACCAAACCCTTCTCCCTAAACTCGAATTCTTCTACTCCATTGGCGTCTCCACGCCCGACCTCGCTAGGTCCCTGACCTCCGACCCGACCATTCTCACCCGAAGCTTGGACAATCAAATCATTCCTTCTTACAGATATCTGAAGAGCGTGTTGCTATCGGACGCCAAAGTCGTCACCGCTCTGAAACGGACGTCGTGGATCTTCCTCAAGGATCACTCGAAGAATCTGATGCCGAACATCGGCGTTTTGCGAGACGAAGGCGTGCCGCAACCGTGCATCGCGTTGTTACTGACGCATTTCCCCGAGACTCTGTTGCAAAAGACCGACAAATTCGAAGAAATCGTTGCTGAAATCAAGCGAATGGGCTTCAATCCGAGCAAATCCACCTTCGTGTTGGCGATGCACGCCATTTCCGGGAAAGGAAACAAATCGATCTGGAACCGATGCTACGATGTGTACCGAAAATGGGGCTGGTCCAAGGACGAGATTCTAATGGCATTCAGAAAGCATCCGCACTGTATGATCTTATCGGAGGAGAAGATCTCGAAAGGAATGGAGTTTTTCACAGACAAGATGGGGCAATCTGCAGGAATGATCGCAAAAAATCCAGTGGTTCTGTTCTTCAGCTTGGAGAAACGGATCATTCCGAGGTGTTCTGTGATCAGAGTTCTGTCGGCGAAAGGATTGATGAAGAGAGATGTGAGCTTGACGACGGTTCTGTTGCCGGTGGAGAAGCGATTTCTTGAGACTTTTGTGATCAAATATCTTGAGGAAGTTCCTGAATTGATGAATTTGTATCAAGGGAAGGCCAATTTTTCTGAAGTTTTGGCTTGA

mRNA sequence

ATTCAGAACTTCCATGGCCTCCGCCTCAGATTCCACTTCTTCGCTCCTCTCCGTTCCTTCCTCCCCAAAACCCCTTTACCTCTTCACAGAAATCAAACCATTTTCAGACCTATTACCTCCAAATTCTCATCAGAACATCACTCCTTCACCATCTCTTACCTCATTGACACCTGCGGATTGCTGCCGGAAACCGCCATTGCTGCATCCGAGAAGGTCCAGCTTCACAACCGCGAAAGGCCCGACTCCGTCTTGGCGCTTCTCAAGAGCCATGGTTTCTCCAAATCGCAGCTCTCCAAGCTCATCCGTAAACGCCCGTCTCTTCTCCTCTCCAACGCCAACCAAACCCTTCTCCCTAAACTCGAATTCTTCTACTCCATTGGCGTCTCCACGCCCGACCTCGCTAGGTCCCTGACCTCCGACCCGACCATTCTCACCCGAAGCTTGGACAATCAAATCATTCCTTCTTACAGATATCTGAAGAGCGTGTTGCTATCGGACGCCAAAGTCGTCACCGCTCTGAAACGGACGTCGTGGATCTTCCTCAAGGATCACTCGAAGAATCTGATGCCGAACATCGGCGTTTTGCGAGACGAAGGCGTGCCGCAACCGTGCATCGCGTTGTTACTGACGCATTTCCCCGAGACTCTGTTGCAAAAGACCGACAAATTCGAAGAAATCGTTGCTGAAATCAAGCGAATGGGCTTCAATCCGAGCAAATCCACCTTCGTGTTGGCGATGCACGCCATTTCCGGGAAAGGAAACAAATCGATCTGGAACCGATGCTACGATGTGTACCGAAAATGGGGCTGGTCCAAGGACGAGATTCTAATGGCATTCAGAAAGCATCCGCACTGTATGATCTTATCGGAGGAGAAGATCTCGAAAGGAATGGAGTTTTTCACAGACAAGATGGGGCAATCTGCAGGAATGATCGCAAAAAATCCAGTGGTTCTGTTCTTCAGCTTGGAGAAACGGATCATTCCGAGGTGTTCTGTGATCAGAGTTCTGTCGGCGAAAGGATTGATGAAGAGAGATGTGAGCTTGACGACGGTTCTGTTGCCGGTGGAGAAGCGATTTCTTGAGACTTTTGTGATCAAATATCTTGAGGAAGTTCCTGAATTGATGAATTTGTATCAAGGGAAGGCCAATTTTTCTGAAGTTTTGGCTTGA

Coding sequence (CDS)

ATTCAGAACTTCCATGGCCTCCGCCTCAGATTCCACTTCTTCGCTCCTCTCCGTTCCTTCCTCCCCAAAACCCCTTTACCTCTTCACAGAAATCAAACCATTTTCAGACCTATTACCTCCAAATTCTCATCAGAACATCACTCCTTCACCATCTCTTACCTCATTGACACCTGCGGATTGCTGCCGGAAACCGCCATTGCTGCATCCGAGAAGGTCCAGCTTCACAACCGCGAAAGGCCCGACTCCGTCTTGGCGCTTCTCAAGAGCCATGGTTTCTCCAAATCGCAGCTCTCCAAGCTCATCCGTAAACGCCCGTCTCTTCTCCTCTCCAACGCCAACCAAACCCTTCTCCCTAAACTCGAATTCTTCTACTCCATTGGCGTCTCCACGCCCGACCTCGCTAGGTCCCTGACCTCCGACCCGACCATTCTCACCCGAAGCTTGGACAATCAAATCATTCCTTCTTACAGATATCTGAAGAGCGTGTTGCTATCGGACGCCAAAGTCGTCACCGCTCTGAAACGGACGTCGTGGATCTTCCTCAAGGATCACTCGAAGAATCTGATGCCGAACATCGGCGTTTTGCGAGACGAAGGCGTGCCGCAACCGTGCATCGCGTTGTTACTGACGCATTTCCCCGAGACTCTGTTGCAAAAGACCGACAAATTCGAAGAAATCGTTGCTGAAATCAAGCGAATGGGCTTCAATCCGAGCAAATCCACCTTCGTGTTGGCGATGCACGCCATTTCCGGGAAAGGAAACAAATCGATCTGGAACCGATGCTACGATGTGTACCGAAAATGGGGCTGGTCCAAGGACGAGATTCTAATGGCATTCAGAAAGCATCCGCACTGTATGATCTTATCGGAGGAGAAGATCTCGAAAGGAATGGAGTTTTTCACAGACAAGATGGGGCAATCTGCAGGAATGATCGCAAAAAATCCAGTGGTTCTGTTCTTCAGCTTGGAGAAACGGATCATTCCGAGGTGTTCTGTGATCAGAGTTCTGTCGGCGAAAGGATTGATGAAGAGAGATGTGAGCTTGACGACGGTTCTGTTGCCGGTGGAGAAGCGATTTCTTGAGACTTTTGTGATCAAATATCTTGAGGAAGTTCCTGAATTGATGAATTTGTATCAAGGGAAGGCCAATTTTTCTGAAGTTTTGGCTTGA

Protein sequence

IQNFHGLRLRFHFFAPLRSFLPKTPLPLHRNQTIFRPITSKFSSEHHSFTISYLIDTCGLLPETAIAASEKVQLHNRERPDSVLALLKSHGFSKSQLSKLIRKRPSLLLSNANQTLLPKLEFFYSIGVSTPDLARSLTSDPTILTRSLDNQIIPSYRYLKSVLLSDAKVVTALKRTSWIFLKDHSKNLMPNIGVLRDEGVPQPCIALLLTHFPETLLQKTDKFEEIVAEIKRMGFNPSKSTFVLAMHAISGKGNKSIWNRCYDVYRKWGWSKDEILMAFRKHPHCMILSEEKISKGMEFFTDKMGQSAGMIAKNPVVLFFSLEKRIIPRCSVIRVLSAKGLMKRDVSLTTVLLPVEKRFLETFVIKYLEEVPELMNLYQGKANFSEVLA

Homology

[Close]

BLAST of Lcy05g006290 vs. ExPASy Swiss-Prot
Match: Q9C6A1 (Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF15 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-10
Identity = 77/322 (23.91%), Postives = 136/322 (42.24%), Query Frame = 0


Query: 55  IDTCGLLPETAIAASEKVQLHNR------ERPDSVLALLKSHGFSKSQLSKLIRKRPSLL 114
           +  CG     + +A + V  H+       ++ +  + +LKS GF  S +S+++   P +L
Sbjct: 116 LSNCGKHGVVSSSAIKSVLEHSSRIGIGPDKFNECVRVLKSLGFCDSTVSRILSSFPGVL 175

Query: 115 LSNANQTLLPKLEFFYSIGVSTPDLARSLTSDPTILTRSLDNQIIPSYRYLKSVLLSDAK 174
           L N  + +  K+EF   IG++  ++ R     P +L    + ++ P        LL +  
Sbjct: 176 LVNEIE-IRRKIEFLVGIGIARDNIERFFHVFPEVLGIGTETRLKP--------LLDEFM 235

Query: 175 VVTALKRTSWIFLKDHSKNLMPNIGVLRDEGVPQPCIALLLTHFPETL-LQKTDKFEEIV 234
            +         F KD  K       + R+  V    + L L   P  L L  T K  E++
Sbjct: 236 KMG--------FSKDDVKK-----EIAREPRV----LGLELGELPRCLELINTLKCREVI 295

Query: 235 AEIKRMGFNPSKSTFVLAMHAISGKGNKSIWNRCYDVYRKWGWSKDEILMAFRKHPHCMI 294
             +  +     ++ F + +                D   K+G  + +      K P  ++
Sbjct: 296 -RVSIISEGAFRAGFEVKLRV--------------DCLCKYGLIRRDAFKVVWKEPRVIL 355

Query: 295 LSEEKISKGMEFFTDKMGQSAGMIAKNPVVLFFSLEKRIIPRCSVIRVLSAKGLMKRDVS 354
              E I K +EF T++MG     +A  P  L  +L+K+I+PR +VI  L  KG +  D+ 
Sbjct: 356 YEIEDIEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDYLKLKGGLGCDIG 396

Query: 355 LTTVLLPVEKRFLETFVIKYLE 370
           L  ++ P  KRF   +V+ Y E
Sbjct: 416 LKGLIKPSMKRFYNLYVMPYPE 396

[Close]

BLAST of Lcy05g006290 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 5.5e-07
Identity = 44/174 (25.29%), Postives = 82/174 (47.13%), Query Frame = 0


Query: 82  SVLALLKSHGFSKSQLSKLIRKRPSLLLSNANQTLLPKLEFFYS-IGVSTPDLARSLTSD 141
           SV  LL S G S+  + +++   P LL S+    +LP L F  + I +S  D+ +S++  
Sbjct: 67  SVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRC 126

Query: 142 PTILTRSLDNQIIPSYRYLKSVLLSDAKVVTALKRTSWIFLKDHSKNLMPNIGVLRDE-G 201
           P +L  S+D Q+ P+  +LK++       +T+  R + + + +  + L+P I  L +  G
Sbjct: 127 PRLLISSVDYQLRPALTFLKTLGFVGRDTITS--RNTVLLVSNVERTLIPKIEYLEEGLG 186

Query: 202 VPQPCIALLLTHFPETLLQKTDK---------FEEIVAEIKRMGFNPSKSTFVL 245
             +  +A ++   P  L    D           EE+  ++K +   P   +F L
Sbjct: 187 FTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSL 238

[Close]

BLAST of Lcy05g006290 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.7e-06
Identity = 50/164 (30.49%), Postives = 82/164 (50.00%), Query Frame = 0


Query: 19  SFLPKTPLPLHRNQTIFRPITSKFS-SEHHSF--TISYLIDTCGLLPETAIAASEKVQLH 78
           SFL    +P  +   I     S FS S  +S   TI YLI+  G + ET +   + VQL 
Sbjct: 260 SFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVG-IKETDV--GKVVQLS 319

Query: 79  NR---ERPD-----SVLALLKSHGFSKSQLSKLIRKRPSLLLSNANQTLLPKLEFFYSIG 138
            +   +R D       + L K  G  +  + K+++K P LL  + +   LP++ F  SIG
Sbjct: 320 PQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIG 379

Query: 139 VSTPDLARSLTSDPTILTRSLDNQIIPSYRYLKSVLLSDAKVVT 172
           +   D+ + LTS   +L+ SL++ + P Y YL + L ++  ++T
Sbjct: 380 MCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILT 420

[Close]

BLAST of Lcy05g006290 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 6.7e-05
Identity = 36/149 (24.16%), Postives = 72/149 (48.32%), Query Frame = 0


Query: 84  LALLKSHGFSKSQLSKLIRKRPSLLLSNANQTLLPKLEFFYSIGVSTPDLARSLTSDPTI 143
           +A L++ G  K+Q +K+I + P+ +L+ + Q L   +EF    G++   + R LT  P I
Sbjct: 272 MAFLETLGIDKNQWAKIISRFPA-ILTYSRQKLTSTVEFLSQTGLTEEQIGRILTRCPNI 331

Query: 144 LTRSLDNQIIPSYRYLKSVLLSDAKVVTALKRTSWIFLKDHSKNLMPNIGVLRDEGVPQP 203
           ++ S+++++ P+  Y +S+   +  V   L R    F      NL P      ++G    
Sbjct: 332 MSYSVEDKLRPTMEYFRSL---NVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLD 391

Query: 204 CIALLLTHF--------PETLLQKTDKFE 225
            I ++++ +         E ++ K D F+
Sbjct: 392 EIGIMISRYGALYTFSLKENVMPKWDYFQ 416

[Close]

BLAST of Lcy05g006290 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 6.7e-05
Identity = 52/278 (18.71%), Postives = 113/278 (40.65%), Query Frame = 0


Query: 91  GFSKSQLSKLIRKRPSLLLSNANQTLLPKLEFFYSIGVSTPDLARSLTSDPTILTRSLDN 150
           G  + +L  ++ + P +L    ++ L+P +E   S+G +  ++A ++T  P IL+ S++ 
Sbjct: 53  GIQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEE 112

Query: 151 QIIPSYRYLKSVLLSDAKVVTALKRTSWIFLKDHSKNLMPNIGVLRDEGVPQP-CIALLL 210
           ++ P   + +++ + + ++   +     +        L   +  L   G+ Q   I  +L
Sbjct: 113 KLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVL 172

Query: 211 THFPETLLQKTDKFEEIVAEIKRMGFNPSK---STFVLAMHAISGKGNKSIWNRCYDVYR 270
              P  +    DK      E  +     S+    + V+    +  +    I    YD  +
Sbjct: 173 VKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLK 232

Query: 271 KWGWSKDEILMAFRKHPHCMILS-EEKISKGMEFFTDKMGQSAGMIAKNPVVLFFSLEKR 330
           + G+   +I      +P  +I S +  +   + F    MG+    +A  P      L+K+
Sbjct: 233 ECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKK 292

Query: 331 IIPRCSVIRVLSAKGLMKRDVSLTTVLLPVEKRFLETF 364
           +  R  +++  +       D SL  +L    K+F E F
Sbjct: 293 VESRFKLVKKNNI------DCSLREMLDCNTKKFHEKF 324

[Close]

BLAST of Lcy05g006290 vs. ExPASy TrEMBL
Match: A0A6J1JU20 (uncharacterized protein LOC111488362 OS=Cucurbita maxima OX=3661 GN=LOC111488362 PE=3 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 4.5e-185
Identity = 324/389 (83.29%), Postives = 356/389 (91.52%), Query Frame = 0


Query: 1   IQNFHGLRLRFHFFAPLRSFLPKTPLPLHRNQTIFRPITSKFSSEHHSFTISYLIDTCGL 60
           +QNFHG+RL+F   APLRSF    P P+HRN TI R I++KFS+EHH+FTISYL DTCGL
Sbjct: 4   LQNFHGVRLKFDLCAPLRSFRSTIPFPIHRNHTIHRLISAKFSAEHHNFTISYLTDTCGL 63

Query: 61  LPETAIAASEKVQLHNRERPDSVLALLKSHGFSKSQLSKLIRKRPSLLLSNANQTLLPKL 120
           LPETAI  SEKVQLHNRE+PDSVL LL+SHGFSKSQ+SKL+RKRPSLLL++ NQTLLPKL
Sbjct: 64  LPETAIVVSEKVQLHNREKPDSVLELLESHGFSKSQISKLVRKRPSLLLASVNQTLLPKL 123

Query: 121 EFFYSIGVSTPDLARSLTSDPTILTRSLDNQIIPSYRYLKSVLLSDAKVVTALKRTSWIF 180
           EFFYSIG S   LAR+LTSDPT+LTRSL NQIIPSYRYLKSVLLSDAKVV ALKRTSWIF
Sbjct: 124 EFFYSIGASRLVLARALTSDPTVLTRSLQNQIIPSYRYLKSVLLSDAKVVAALKRTSWIF 183

Query: 181 LKDHSKNLMPNIGVLRDEGVPQPCIALLLTHFPETLLQKTDKFEEIVAEIKRMGFNPSKS 240
           L+DH+K LMPNI VLRDEGVPQPCIALLLTHFPETL+QKTD FEE VAEIK MGF+PSKS
Sbjct: 184 LEDHTKTLMPNIDVLRDEGVPQPCIALLLTHFPETLMQKTDSFEETVAEIKGMGFDPSKS 243

Query: 241 TFVLAMHAISGKGNKSIWNRCYDVYRKWGWSKDEILMAFRKHPHCMILSEEKISKGMEFF 300
           TFVLA+HAISGKGN+SIWNRCYDVYRKWGW+K+EILMAFRKHPHCMILSEEKISKGME+F
Sbjct: 244 TFVLAIHAISGKGNRSIWNRCYDVYRKWGWTKEEILMAFRKHPHCMILSEEKISKGMEYF 303

Query: 301 TDKMGQSAGMIAKNPVVLFFSLEKRIIPRCSVIRVLSAKGLMKRDVSLTTVLLPVEKRFL 360
           T+KMG+SAG IAK PVVLFFSLEKRIIPRCSV+RVLSA+GL+KRD+SLTTVLLPVEKRFL
Sbjct: 304 TEKMGKSAGTIAKTPVVLFFSLEKRIIPRCSVLRVLSARGLVKRDLSLTTVLLPVEKRFL 363

Query: 361 ETFVIKYLEEVPELMNLYQGKANFSEVLA 390
           ETFVIKYLE VPELM+LYQG AN  EVLA
Sbjct: 364 ETFVIKYLENVPELMDLYQGNANLDEVLA 392

[Close]

BLAST of Lcy05g006290 vs. ExPASy TrEMBL
Match: A0A6J1GNW6 (uncharacterized protein LOC111455797 OS=Cucurbita moschata OX=3662 GN=LOC111455797 PE=3 SV=1)

HSP 1 Score: 656.8 bits (1693), Expect = 5.8e-185
Identity = 325/389 (83.55%), Postives = 354/389 (91.00%), Query Frame = 0


Query: 1   IQNFHGLRLRFHFFAPLRSFLPKTPLPLHRNQTIFRPITSKFSSEHHSFTISYLIDTCGL 60
           +QNFHGLRL+F   APLRSF    P P+HRN TI R IT+KFS+EHH+FTISYL D CGL
Sbjct: 4   LQNFHGLRLKFDLCAPLRSFRSTIPFPIHRNHTIHRLITAKFSAEHHNFTISYLTDACGL 63

Query: 61  LPETAIAASEKVQLHNRERPDSVLALLKSHGFSKSQLSKLIRKRPSLLLSNANQTLLPKL 120
           LPETAI  SEKVQLHNRE+PDSVL LL+SHGFSKSQ+SKL+RKRPSLLL++ NQTLLPKL
Sbjct: 64  LPETAIVVSEKVQLHNREKPDSVLELLESHGFSKSQISKLVRKRPSLLLASVNQTLLPKL 123

Query: 121 EFFYSIGVSTPDLARSLTSDPTILTRSLDNQIIPSYRYLKSVLLSDAKVVTALKRTSWIF 180
           EFFYSIG S   LAR+LTSDPT+LTRSL NQIIPSYRYLKSVLLSDAKVV ALKRTSWIF
Sbjct: 124 EFFYSIGASRLVLARALTSDPTVLTRSLQNQIIPSYRYLKSVLLSDAKVVAALKRTSWIF 183

Query: 181 LKDHSKNLMPNIGVLRDEGVPQPCIALLLTHFPETLLQKTDKFEEIVAEIKRMGFNPSKS 240
           L+DH+K LMPNI VLRDEGVPQPCIALLLTHFPETL+QKTD FEE VAEIK MGF+PSKS
Sbjct: 184 LEDHTKTLMPNIDVLRDEGVPQPCIALLLTHFPETLMQKTDSFEETVAEIKGMGFDPSKS 243

Query: 241 TFVLAMHAISGKGNKSIWNRCYDVYRKWGWSKDEILMAFRKHPHCMILSEEKISKGMEFF 300
           TFVLA+HAISGKGN+SIWNRCYDVYRKWGW+KDEILMAFRKHPHCMILSEEKISKGME+F
Sbjct: 244 TFVLAIHAISGKGNRSIWNRCYDVYRKWGWTKDEILMAFRKHPHCMILSEEKISKGMEYF 303

Query: 301 TDKMGQSAGMIAKNPVVLFFSLEKRIIPRCSVIRVLSAKGLMKRDVSLTTVLLPVEKRFL 360
           T+ MG+SAG IAK PVVLFFSLEKRIIPRCSV+RVLSA+GL+KRD+SLTTVLLPVEKRFL
Sbjct: 304 TETMGKSAGTIAKTPVVLFFSLEKRIIPRCSVLRVLSARGLVKRDLSLTTVLLPVEKRFL 363

Query: 361 ETFVIKYLEEVPELMNLYQGKANFSEVLA 390
           ETFVIKYLE VPELM+LYQG AN  EVLA
Sbjct: 364 ETFVIKYLEAVPELMDLYQGNANLDEVLA 392

[Close]

BLAST of Lcy05g006290 vs. ExPASy TrEMBL
Match: A0A7N2N432 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 2.6e-140
Identity = 255/395 (64.56%), Postives = 317/395 (80.25%), Query Frame = 0


Query: 1   IQNFHGLRLRFHFFA----PLRSFL--PKTPLPL-HRNQTIFRPITSKFSSEHHSFTISY 60
           IQNF  LR    F +    P + F+   KT L   H++ ++ +PITSK S+   + TISY
Sbjct: 4   IQNFQFLRTSCIFLSKKPLPNKPFIGVSKTQLCFSHQHHSLHKPITSKISTNQQTSTISY 63

Query: 61  LIDTCGLLPETAIAASEKVQLHNRERPDSVLALLKSHGFSKSQLSKLIRKRPSLLLSNAN 120
           LI++CGLLPETA   S+KV L N E+ +SVLALL++HGFS++Q+S LIRKRP LLL++  
Sbjct: 64  LINSCGLLPETASLVSQKVHLQNPEKANSVLALLRNHGFSQTQISNLIRKRPLLLLADPE 123

Query: 121 QTLLPKLEFFYSIGVSTPDLARSLTSDPTILTRSLDNQIIPSYRYLKSVLLSDAKVVTAL 180
            TLLPKLEFF+SIG S+ DLAR LT+DPT+LTRSL+NQI+P Y +LKSVLLSD K+VTAL
Sbjct: 124 NTLLPKLEFFHSIGASSTDLARVLTADPTLLTRSLENQIVPCYNFLKSVLLSDKKIVTAL 183

Query: 181 KRTSWIFLKDHSKNLMPNIGVLRDEGVPQPCIALLLTHFPETLLQKTDKFEEIVAEIKRM 240
           KRTSWIFL+ H+KNL+PNI  LR+ GVP+ CI LLLTHFPE L+QK D F  IV E+K M
Sbjct: 184 KRTSWIFLEGHTKNLIPNISFLRELGVPESCIVLLLTHFPEALMQKHDNFGHIVNEVKEM 243

Query: 241 GFNPSKSTFVLAMHAISGKGNKSIWNRCYDVYRKWGWSKDEILMAFRKHPHCMILSEEKI 300
           GF+P KSTFVLA+HAISGKGNKSIW RCY+VYR+WGWSKDEIL+AFRKHPHCMILSE+KI
Sbjct: 244 GFDPMKSTFVLAIHAISGKGNKSIWERCYEVYRRWGWSKDEILLAFRKHPHCMILSEKKI 303

Query: 301 SKGMEFFTDKMGQSAGMIAKNPVVLFFSLEKRIIPRCSVIRVLSAKGLMKRDVSLTTVLL 360
            + M+FF +KMG  + MIAK PVVL FSLE+RI+PRCSVI+VLS KGL+K+D+SLTTVLL
Sbjct: 304 MRAMDFFVNKMGWPSKMIAKCPVVLLFSLERRIVPRCSVIQVLSLKGLVKKDMSLTTVLL 363

Query: 361 PVEKRFLETFVIKYLEEVPELMNLYQGKANFSEVL 389
           PVE+ FLE FV ++ EE+P+LM++YQGK     ++
Sbjct: 364 PVEESFLERFVTRFQEEIPQLMSVYQGKVYIESII 398

[Close]

BLAST of Lcy05g006290 vs. ExPASy TrEMBL
Match: A0A7J7FTK3 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_032214 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 5.5e-135
Identity = 239/356 (67.13%), Postives = 302/356 (84.83%), Query Frame = 0


Query: 32  QTIFRPITSKFSSEHHSFTISYLIDTCGLLPETAIAASEKVQLHNRERPDSVLALLKSHG 91
           +T+ + I+S  SS   SF++SYLI++CGL PE+AI+ASEKV+  + E+PDSVL LL +HG
Sbjct: 68  ETLKKSISSGKSSIEDSFSVSYLINSCGLSPESAISASEKVKFESPEKPDSVLNLLTTHG 127

Query: 92  FSKSQLSKLIRKRPSLLLSNANQTLLPKLEFFYSIGVSTPDLARSLTSDPTILTRSLDNQ 151
           F+ +Q++ L+R+RP LLL+N  +TL PKLEFF SIGVS  DLAR+L+S+PT+LTRSL+NQ
Sbjct: 128 FTNAQITNLVRRRPVLLLANPEKTLSPKLEFFQSIGVSRTDLARTLSSNPTLLTRSLENQ 187

Query: 152 IIPSYRYLKSVLLSDAKVVTALKRTSWIFLKDHSKNLMPNIGVLRDEGVPQPCIALLLTH 211
           IIPSY +LK V+ SD KVV+ALKRTSWIFL+DH KN++PNI VLR++ VP+  IALLLTH
Sbjct: 188 IIPSYNFLKGVVQSDKKVVSALKRTSWIFLEDHKKNIVPNIAVLREDEVPESSIALLLTH 247

Query: 212 FPETLLQKTDKFEEIVAEIKRMGFNPSKSTFVLAMHAISGKGNKSIWNRCYDVYRKWGWS 271
           FPE ++QK D+F EIV E+K MGFNP KSTFVLA+HAISGKGNKSIW+RCY+ YRKWGWS
Sbjct: 248 FPEAIMQKHDQFREIVNEVKTMGFNPLKSTFVLAVHAISGKGNKSIWDRCYEAYRKWGWS 307

Query: 272 KDEILMAFRKHPHCMILSEEKISKGMEFFTDKMGQSAGMIAKNPVVLFFSLEKRIIPRCS 331
            DEI +AF+KHPHCMILSE+KI++ M+FF +KMG ++ MIA+ PVVLFFSLEKRIIPRCS
Sbjct: 308 NDEIHLAFKKHPHCMILSEKKITRAMDFFVNKMGWNSKMIARCPVVLFFSLEKRIIPRCS 367

Query: 332 VIRVLSAKGLMKRDVSLTTVLLPVEKRFLETFVIKYLEEVPELMNLYQGKANFSEV 388
           VI+VLS KGL+K+D+SL++VLLPVEK FLE FV KY EEVPEL+++YQGK    E+
Sbjct: 368 VIQVLSVKGLIKKDLSLSSVLLPVEKCFLERFVTKYEEEVPELLSVYQGKVGILEL 423

[Close]

BLAST of Lcy05g006290 vs. ExPASy TrEMBL
Match: A0A4S4CVI5 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_017620 PE=3 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.6e-134
Identity = 238/350 (68.00%), Postives = 300/350 (85.71%), Query Frame = 0


Query: 32  QTIFRPITSKFSSEHHSFTISYLIDTCGLLPETAIAASEKVQLHNRERPDSVLALLKSHG 91
           +T+ + I+S  SS  +SF++SYLI +CGL PE+AI+ASEKV+  + E+PDSVL LL +HG
Sbjct: 68  ETLKKSISSGKSSIEYSFSVSYLIHSCGLSPESAISASEKVKFESPEKPDSVLNLLTTHG 127

Query: 92  FSKSQLSKLIRKRPSLLLSNANQTLLPKLEFFYSIGVSTPDLARSLTSDPTILTRSLDNQ 151
           F+ +Q++ L+R+RP LLL+N  +TL PKLEFF SIGVS  DLAR+L+S+PT+LTRSL+NQ
Sbjct: 128 FTNAQITNLVRRRPVLLLANPEKTLSPKLEFFQSIGVSRTDLARTLSSNPTLLTRSLENQ 187

Query: 152 IIPSYRYLKSVLLSDAKVVTALKRTSWIFLKDHSKNLMPNIGVLRDEGVPQPCIALLLTH 211
           IIPSY +LK V+ SD KVV+ALKRTSWIFL+DH KN++PNI VLR++ VP+  IALLLTH
Sbjct: 188 IIPSYNFLKGVVQSDKKVVSALKRTSWIFLEDHKKNIVPNIAVLREDEVPESSIALLLTH 247

Query: 212 FPETLLQKTDKFEEIVAEIKRMGFNPSKSTFVLAMHAISGKGNKSIWNRCYDVYRKWGWS 271
           FPE ++QK D+F EIV E+K MGFNP KSTFVLA+HAISGKGNKSIW+RCY+ YRKWGWS
Sbjct: 248 FPEAIMQKHDQFREIVNEVKTMGFNPLKSTFVLAVHAISGKGNKSIWDRCYEAYRKWGWS 307

Query: 272 KDEILMAFRKHPHCMILSEEKISKGMEFFTDKMGQSAGMIAKNPVVLFFSLEKRIIPRCS 331
            DEI +AF+KHPHCMILSE+KI++ M+FF +KMG ++ MIA+ PVVLFFSLEKRIIPRCS
Sbjct: 308 NDEIHLAFKKHPHCMILSEKKITRAMDFFVNKMGWNSKMIARCPVVLFFSLEKRIIPRCS 367

Query: 332 VIRVLSAKGLMKRDVSLTTVLLPVEKRFLETFVIKYLEEVPELMNLYQGK 382
           VI+VLS KGL+K+D+SL++VLLPVEK FLE FV KY EEVPEL+++YQGK
Sbjct: 368 VIQVLSVKGLIKKDLSLSSVLLPVEKCFLERFVTKYEEEVPELLSVYQGK 417

[Close]

BLAST of Lcy05g006290 vs. NCBI nr
Match: XP_023549206.1 (uncharacterized protein LOC111807635 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 659.8 bits (1701), Expect = 1.4e-185
Identity = 326/389 (83.80%), Postives = 356/389 (91.52%), Query Frame = 0


Query: 1   IQNFHGLRLRFHFFAPLRSFLPKTPLPLHRNQTIFRPITSKFSSEHHSFTISYLIDTCGL 60
           +QNFHGLRL+F   APLRSF    P P+HRN TI R IT+KFS+EHH+FTISYL DTCGL
Sbjct: 4   LQNFHGLRLKFDLCAPLRSFRSTIPFPIHRNHTIHRLITAKFSAEHHNFTISYLTDTCGL 63

Query: 61  LPETAIAASEKVQLHNRERPDSVLALLKSHGFSKSQLSKLIRKRPSLLLSNANQTLLPKL 120
           LPETAI  SEKVQLHNRE+PDSVL LL+SHGFSKSQ+SKL+RKRPSLLL++ NQTLLPKL
Sbjct: 64  LPETAIVVSEKVQLHNREKPDSVLELLESHGFSKSQISKLVRKRPSLLLASVNQTLLPKL 123

Query: 121 EFFYSIGVSTPDLARSLTSDPTILTRSLDNQIIPSYRYLKSVLLSDAKVVTALKRTSWIF 180
           EFFYSIG S   LAR+LTSDPT+LTRSL NQIIPSYRYLKSVLLSDAKVV ALKRTSWIF
Sbjct: 124 EFFYSIGASRLVLARALTSDPTVLTRSLQNQIIPSYRYLKSVLLSDAKVVAALKRTSWIF 183

Query: 181 LKDHSKNLMPNIGVLRDEGVPQPCIALLLTHFPETLLQKTDKFEEIVAEIKRMGFNPSKS 240
           L+DH+K LMPNI VLRDEGVPQPCIALLLTHFPETL+QKTD FEE VAEIK MGF+PSKS
Sbjct: 184 LEDHTKTLMPNIDVLRDEGVPQPCIALLLTHFPETLMQKTDSFEETVAEIKGMGFDPSKS 243

Query: 241 TFVLAMHAISGKGNKSIWNRCYDVYRKWGWSKDEILMAFRKHPHCMILSEEKISKGMEFF 300
           TFVLA+HAISGKGN+SIWNRCYDVYRKWGW+KDEILMAFRKHPHCMILSEEKISKGME+F
Sbjct: 244 TFVLAIHAISGKGNRSIWNRCYDVYRKWGWTKDEILMAFRKHPHCMILSEEKISKGMEYF 303

Query: 301 TDKMGQSAGMIAKNPVVLFFSLEKRIIPRCSVIRVLSAKGLMKRDVSLTTVLLPVEKRFL 360
           T+ MG+SAG IAK PVVLFFSLEKRIIPRCSV+RVLSA+GL+KRD+SLTTVLLPVEKRFL
Sbjct: 304 TETMGKSAGTIAKTPVVLFFSLEKRIIPRCSVLRVLSARGLVKRDLSLTTVLLPVEKRFL 363

Query: 361 ETFVIKYLEEVPELMNLYQGKANFSEVLA 390
           ETFVIKYLE+VPELM+LYQG AN  EVLA
Sbjct: 364 ETFVIKYLEDVPELMDLYQGNANLDEVLA 392

[Close]

BLAST of Lcy05g006290 vs. NCBI nr
Match: KAG6575851.1 (Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 658.7 bits (1698), Expect = 3.2e-185
Identity = 325/389 (83.55%), Postives = 356/389 (91.52%), Query Frame = 0


Query: 1   IQNFHGLRLRFHFFAPLRSFLPKTPLPLHRNQTIFRPITSKFSSEHHSFTISYLIDTCGL 60
           +QNFHGLRL+F   APLRSF    P P+HRN TI R IT+KFS+EHH+FTISYL DTCGL
Sbjct: 4   LQNFHGLRLKFDLCAPLRSFRSTIPFPIHRNHTIHRLITAKFSAEHHNFTISYLTDTCGL 63

Query: 61  LPETAIAASEKVQLHNRERPDSVLALLKSHGFSKSQLSKLIRKRPSLLLSNANQTLLPKL 120
           LPETAI  SEKVQLHNRE+PDSVL LL+SHGFSKSQ+SKL+RKRPSLLL++ NQTLLPKL
Sbjct: 64  LPETAIVVSEKVQLHNREKPDSVLELLESHGFSKSQISKLVRKRPSLLLASVNQTLLPKL 123

Query: 121 EFFYSIGVSTPDLARSLTSDPTILTRSLDNQIIPSYRYLKSVLLSDAKVVTALKRTSWIF 180
           EFFYSIG S   LAR+LTSDPT+LTRSL NQIIPSYRYLKSVLLSDAKVV ALKRTSWIF
Sbjct: 124 EFFYSIGASRLVLARALTSDPTVLTRSLQNQIIPSYRYLKSVLLSDAKVVAALKRTSWIF 183

Query: 181 LKDHSKNLMPNIGVLRDEGVPQPCIALLLTHFPETLLQKTDKFEEIVAEIKRMGFNPSKS 240
           L+DH+K LMPNI VLRDEGVPQPCIALLLTHFPETL+QKTD FEE VAEIK MGF+PSKS
Sbjct: 184 LEDHTKTLMPNIDVLRDEGVPQPCIALLLTHFPETLMQKTDSFEETVAEIKGMGFDPSKS 243

Query: 241 TFVLAMHAISGKGNKSIWNRCYDVYRKWGWSKDEILMAFRKHPHCMILSEEKISKGMEFF 300
           TFVLA+HAISGKGN+SIWNRCYDVYRKWGW+KDEILMAFRKHPHCMILSEEKISKGME+F
Sbjct: 244 TFVLAIHAISGKGNRSIWNRCYDVYRKWGWTKDEILMAFRKHPHCMILSEEKISKGMEYF 303

Query: 301 TDKMGQSAGMIAKNPVVLFFSLEKRIIPRCSVIRVLSAKGLMKRDVSLTTVLLPVEKRFL 360
           T+ MG+SAG IAK PVVLFFSLEKRIIPRCSV+RVLSA+GL+KRD+SLTTVLLPVEKRFL
Sbjct: 304 TETMGKSAGTIAKTPVVLFFSLEKRIIPRCSVLRVLSARGLVKRDLSLTTVLLPVEKRFL 363

Query: 361 ETFVIKYLEEVPELMNLYQGKANFSEVLA 390
           ETFVIKYL++VPELM+LYQG AN  EVLA
Sbjct: 364 ETFVIKYLDDVPELMDLYQGNANLDEVLA 392

[Close]

BLAST of Lcy05g006290 vs. NCBI nr
Match: XP_022991835.1 (uncharacterized protein LOC111488362 [Cucurbita maxima])

HSP 1 Score: 657.1 bits (1694), Expect = 9.2e-185
Identity = 324/389 (83.29%), Postives = 356/389 (91.52%), Query Frame = 0


Query: 1   IQNFHGLRLRFHFFAPLRSFLPKTPLPLHRNQTIFRPITSKFSSEHHSFTISYLIDTCGL 60
           +QNFHG+RL+F   APLRSF    P P+HRN TI R I++KFS+EHH+FTISYL DTCGL
Sbjct: 4   LQNFHGVRLKFDLCAPLRSFRSTIPFPIHRNHTIHRLISAKFSAEHHNFTISYLTDTCGL 63

Query: 61  LPETAIAASEKVQLHNRERPDSVLALLKSHGFSKSQLSKLIRKRPSLLLSNANQTLLPKL 120
           LPETAI  SEKVQLHNRE+PDSVL LL+SHGFSKSQ+SKL+RKRPSLLL++ NQTLLPKL
Sbjct: 64  LPETAIVVSEKVQLHNREKPDSVLELLESHGFSKSQISKLVRKRPSLLLASVNQTLLPKL 123

Query: 121 EFFYSIGVSTPDLARSLTSDPTILTRSLDNQIIPSYRYLKSVLLSDAKVVTALKRTSWIF 180
           EFFYSIG S   LAR+LTSDPT+LTRSL NQIIPSYRYLKSVLLSDAKVV ALKRTSWIF
Sbjct: 124 EFFYSIGASRLVLARALTSDPTVLTRSLQNQIIPSYRYLKSVLLSDAKVVAALKRTSWIF 183

Query: 181 LKDHSKNLMPNIGVLRDEGVPQPCIALLLTHFPETLLQKTDKFEEIVAEIKRMGFNPSKS 240
           L+DH+K LMPNI VLRDEGVPQPCIALLLTHFPETL+QKTD FEE VAEIK MGF+PSKS
Sbjct: 184 LEDHTKTLMPNIDVLRDEGVPQPCIALLLTHFPETLMQKTDSFEETVAEIKGMGFDPSKS 243

Query: 241 TFVLAMHAISGKGNKSIWNRCYDVYRKWGWSKDEILMAFRKHPHCMILSEEKISKGMEFF 300
           TFVLA+HAISGKGN+SIWNRCYDVYRKWGW+K+EILMAFRKHPHCMILSEEKISKGME+F
Sbjct: 244 TFVLAIHAISGKGNRSIWNRCYDVYRKWGWTKEEILMAFRKHPHCMILSEEKISKGMEYF 303

Query: 301 TDKMGQSAGMIAKNPVVLFFSLEKRIIPRCSVIRVLSAKGLMKRDVSLTTVLLPVEKRFL 360
           T+KMG+SAG IAK PVVLFFSLEKRIIPRCSV+RVLSA+GL+KRD+SLTTVLLPVEKRFL
Sbjct: 304 TEKMGKSAGTIAKTPVVLFFSLEKRIIPRCSVLRVLSARGLVKRDLSLTTVLLPVEKRFL 363

Query: 361 ETFVIKYLEEVPELMNLYQGKANFSEVLA 390
           ETFVIKYLE VPELM+LYQG AN  EVLA
Sbjct: 364 ETFVIKYLENVPELMDLYQGNANLDEVLA 392

[Close]

BLAST of Lcy05g006290 vs. NCBI nr
Match: XP_022953179.1 (uncharacterized protein LOC111455797 [Cucurbita moschata])

HSP 1 Score: 656.8 bits (1693), Expect = 1.2e-184
Identity = 325/389 (83.55%), Postives = 354/389 (91.00%), Query Frame = 0


Query: 1   IQNFHGLRLRFHFFAPLRSFLPKTPLPLHRNQTIFRPITSKFSSEHHSFTISYLIDTCGL 60
           +QNFHGLRL+F   APLRSF    P P+HRN TI R IT+KFS+EHH+FTISYL D CGL
Sbjct: 4   LQNFHGLRLKFDLCAPLRSFRSTIPFPIHRNHTIHRLITAKFSAEHHNFTISYLTDACGL 63

Query: 61  LPETAIAASEKVQLHNRERPDSVLALLKSHGFSKSQLSKLIRKRPSLLLSNANQTLLPKL 120
           LPETAI  SEKVQLHNRE+PDSVL LL+SHGFSKSQ+SKL+RKRPSLLL++ NQTLLPKL
Sbjct: 64  LPETAIVVSEKVQLHNREKPDSVLELLESHGFSKSQISKLVRKRPSLLLASVNQTLLPKL 123

Query: 121 EFFYSIGVSTPDLARSLTSDPTILTRSLDNQIIPSYRYLKSVLLSDAKVVTALKRTSWIF 180
           EFFYSIG S   LAR+LTSDPT+LTRSL NQIIPSYRYLKSVLLSDAKVV ALKRTSWIF
Sbjct: 124 EFFYSIGASRLVLARALTSDPTVLTRSLQNQIIPSYRYLKSVLLSDAKVVAALKRTSWIF 183

Query: 181 LKDHSKNLMPNIGVLRDEGVPQPCIALLLTHFPETLLQKTDKFEEIVAEIKRMGFNPSKS 240
           L+DH+K LMPNI VLRDEGVPQPCIALLLTHFPETL+QKTD FEE VAEIK MGF+PSKS
Sbjct: 184 LEDHTKTLMPNIDVLRDEGVPQPCIALLLTHFPETLMQKTDSFEETVAEIKGMGFDPSKS 243

Query: 241 TFVLAMHAISGKGNKSIWNRCYDVYRKWGWSKDEILMAFRKHPHCMILSEEKISKGMEFF 300
           TFVLA+HAISGKGN+SIWNRCYDVYRKWGW+KDEILMAFRKHPHCMILSEEKISKGME+F
Sbjct: 244 TFVLAIHAISGKGNRSIWNRCYDVYRKWGWTKDEILMAFRKHPHCMILSEEKISKGMEYF 303

Query: 301 TDKMGQSAGMIAKNPVVLFFSLEKRIIPRCSVIRVLSAKGLMKRDVSLTTVLLPVEKRFL 360
           T+ MG+SAG IAK PVVLFFSLEKRIIPRCSV+RVLSA+GL+KRD+SLTTVLLPVEKRFL
Sbjct: 304 TETMGKSAGTIAKTPVVLFFSLEKRIIPRCSVLRVLSARGLVKRDLSLTTVLLPVEKRFL 363

Query: 361 ETFVIKYLEEVPELMNLYQGKANFSEVLA 390
           ETFVIKYLE VPELM+LYQG AN  EVLA
Sbjct: 364 ETFVIKYLEAVPELMDLYQGNANLDEVLA 392

[Close]

BLAST of Lcy05g006290 vs. NCBI nr
Match: KAG7014386.1 (Transcription termination factor MTERF15, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 653.7 bits (1685), Expect = 1.0e-183
Identity = 327/392 (83.42%), Postives = 358/392 (91.33%), Query Frame = 0


Query: 1   IQNFHGLRLRFHFFAPLRSF--LPKT-PLPLHRNQTIFRPITSKFSSEHHSFTISYLIDT 60
           +QNFHGLRL+F   APLRSF  L  T P P+HRN TI R IT+KFS+EHH+FTISYL DT
Sbjct: 4   LQNFHGLRLKFDLCAPLRSFRSLRSTIPFPIHRNHTIHRLITAKFSAEHHNFTISYLTDT 63

Query: 61  CGLLPETAIAASEKVQLHNRERPDSVLALLKSHGFSKSQLSKLIRKRPSLLLSNANQTLL 120
           CGLLPETAI  SEKVQLHNRE+PDSVL LL+SHGFSKSQ+SKL+RKRPSLLL++ NQTLL
Sbjct: 64  CGLLPETAIVVSEKVQLHNREKPDSVLELLESHGFSKSQISKLVRKRPSLLLASVNQTLL 123

Query: 121 PKLEFFYSIGVSTPDLARSLTSDPTILTRSLDNQIIPSYRYLKSVLLSDAKVVTALKRTS 180
           PKLEFFYSIG S   LAR+LTSDPT+LTRSL NQIIPSYRYLKSVLLSDAKVV ALKRTS
Sbjct: 124 PKLEFFYSIGASRLVLARALTSDPTVLTRSLQNQIIPSYRYLKSVLLSDAKVVAALKRTS 183

Query: 181 WIFLKDHSKNLMPNIGVLRDEGVPQPCIALLLTHFPETLLQKTDKFEEIVAEIKRMGFNP 240
           WIFL+DH+K LMPNI VLRDEGVPQPCIALLLTHFPETL+QKTD FEE VAEIK MGF+P
Sbjct: 184 WIFLEDHTKTLMPNIDVLRDEGVPQPCIALLLTHFPETLMQKTDSFEETVAEIKGMGFDP 243

Query: 241 SKSTFVLAMHAISGKGNKSIWNRCYDVYRKWGWSKDEILMAFRKHPHCMILSEEKISKGM 300
           SKSTFVLA+HAISGKGN+SIWNRCYDVYRKWGW+KDEILMAFRKHPHCMILSEEKISKGM
Sbjct: 244 SKSTFVLAIHAISGKGNRSIWNRCYDVYRKWGWTKDEILMAFRKHPHCMILSEEKISKGM 303

Query: 301 EFFTDKMGQSAGMIAKNPVVLFFSLEKRIIPRCSVIRVLSAKGLMKRDVSLTTVLLPVEK 360
           E+FT+ MG+SAG IAK PVVLFFSLEKRIIPRCSV+RVLSA+GL+KRD+SLTTVLLPVEK
Sbjct: 304 EYFTETMGKSAGTIAKTPVVLFFSLEKRIIPRCSVLRVLSARGLVKRDLSLTTVLLPVEK 363

Query: 361 RFLETFVIKYLEEVPELMNLYQGKANFSEVLA 390
           RFLETFVIKYL++VPELM+LYQG AN  EVLA
Sbjct: 364 RFLETFVIKYLDDVPELMDLYQGNANLDEVLA 395

[Close]

BLAST of Lcy05g006290 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 441.0 bits (1133), Expect = 9.7e-124
Identity = 219/374 (58.56%), Postives = 285/374 (76.20%), Query Frame = 0


Query: 24  TPLPLHRNQTIF---------RPITSKFS--------SEHHSFTISYLIDTCGLLPETAI 83
           T LP H  + IF          P+T+  S         +  SFT++YLID+CGL P++A 
Sbjct: 28  TILPKHHRKPIFVFSLQTQFSSPVTTLTSKNPKDDEQQQKLSFTLNYLIDSCGLSPDSAT 87

Query: 84  AASEKVQLHNRERPDSVLALLKSHGFSKSQLSKLIRKRPSLLLSNANQTLLPKLEFFYSI 143
            AS K+ L + ERP++VL LL+ HGF+ +Q+S L++KRP LLL+NA   LLPKL FF SI
Sbjct: 88  VASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSI 147

Query: 144 GVSTPDLARSLTSDPTILTRSLDNQIIPSYRYLKSVLLSDAKVVTALKRTSWIFLKDHSK 203
           GVS   LAR+L SDPTILTRSL NQ+IPSY +LKSVL SD K+V AL+RT+W+FL+DH+K
Sbjct: 148 GVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTK 207

Query: 204 NLMPNIGVLRDEGVPQPCIALLLTHFPETLLQKTDKFEEIVAEIKRMGFNPSKSTFVLAM 263
           NL+PNI  + + GVP+ CI LLLTHFPE ++QK  +F+ I  + + MGFNP KSTFVLA+
Sbjct: 208 NLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAI 267

Query: 264 HAISGKGNKSIWNRCYDVYRKWGWSKDEILMAFRKHPHCMILSEEKISKGMEFFTDKMGQ 323
           HA+SGKGNKSIW++C++VY++WGWS+D+I+ AF+KHPHCM+LSE KI++ ME+F ++M  
Sbjct: 268 HALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNM 327

Query: 324 SAGMIAKNPVVLFFSLEKRIIPRCSVIRVLSAKGLMKRDVSLTTVLLPVEKRFLETFVIK 381
           +   IA+ PVVLFFSLEKRIIPRCSV +VL + GL+K D SLT++L+PVEK FLE  VIK
Sbjct: 328 APRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIK 387

[Close]

BLAST of Lcy05g006290 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 224.9 bits (572), Expect = 1.1e-58
Identity = 125/329 (37.99%), Postives = 199/329 (60.49%), Query Frame = 0


Query: 48  SFTISYLIDTCGLLPETAIAASEKVQLHNRERPDSVLALLKSHGFSKSQLSKLIRKRPSL 107
           SFT+SYL+D+CGL  E+A + S  V+L + ++PDSVLAL K HGF+  Q++ +I+  P +
Sbjct: 56  SFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRV 115

Query: 108 LLSNANQTLLPKLEFFYSIGVSTPDLARSLTSDPTILTRSLDNQIIPSYRYLKSVLLSDA 167
           L  +    + PKL FF SIG ST D A+ ++S P +L+ SL  ++IP Y  LKS+L+ + 
Sbjct: 116 LSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEE 175

Query: 168 KVVTALKRTSWIFLKDHSKNLMPNIGVLRDEGVPQPCIALLLTHFPETLLQKTDKFEEIV 227
            VV  LKR    F    +  +   + + R+ GVP   I  L+   P T   +  +F E++
Sbjct: 176 SVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVL 235

Query: 228 AEIKRMGFNPSKSTFVLAMHAISGKGNKSIWNRCYDVYRKWGWSKDEILMAFRKHPHCMI 287
             +   GF+P K+ FV AM A     ++S   R + +++ +GWSK++ + A  + P+C+ 
Sbjct: 236 NRVCSYGFDPKKAGFVHAMVAFDCT-SESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVT 295

Query: 288 LSEEKISKGMEFFTDKMGQSAGMIAKNPVVLFFSLEKRIIPRCSVIRVLSAKGLMKR-DV 347
           +S+EKI   +E+  + +G  A  I   PVVL  S+EKRI PR  VI +L +KGL+K+ D+
Sbjct: 296 VSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDI 355

Query: 348 SLTTVLLPVEKRFLETFVIKYLEEVPELM 376
           +  T+L      F++ FV+KY +E+P+L+
Sbjct: 356 NYFTILKLKSSEFMDKFVLKYQDEMPQLV 383

[Close]

BLAST of Lcy05g006290 vs. TAIR 10
Match: AT1G62120.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 190.7 bits (483), Expect = 2.3e-48
Identity = 125/387 (32.30%), Postives = 211/387 (54.52%), Query Frame = 0


Query: 31  NQTIFRPITSKFSSEHHSFTISYLIDTCGLLPETAIAASEKVQLHNRERPDSVLALLKSH 90
           +  I   ++S+   + H+FT+SYL+D+ GL  + A + S KV   N+  PDSVL+LL+SH
Sbjct: 39  SSAIAADVSSRDGRKGHNFTVSYLVDSLGLATKVAESISMKVSFDNKGNPDSVLSLLRSH 98

Query: 91  GFSKSQLSKLIRKRPSLLLSNANQTLLPKLEFFYSIGVSTPDLARSLTSDPTILTRSLDN 150
           GF+ SQ+S +IR  P LL+ +A ++L PKL+F  SIG S+ +L  ++++ P IL +    
Sbjct: 99  GFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQSIGASSSELTETVSAVPKILGKRKGK 158

Query: 151 QIIPSYRYLKSVLLSDAKVVTALKRTSWIFLKDHSKNLMPNIGVLRDEGVPQPCIALLLT 210
            +   Y ++K ++ +D K     K    +      +N + N+ VLR+ GVPQ  +  LL 
Sbjct: 159 SLSRYYDFVKVIIEAD-KSSKLEKLCHSLPEGSKQENKIRNLLVLREMGVPQRLLFSLLI 218

Query: 211 HFPETLLQKTDKFEEIVAEIKRMGFNPSKSTFVLAMHAISGKGNKSIWNR---------- 270
                +  K +KF+E + +   +GF+P+ +TFV A++ + G  +K I N+          
Sbjct: 219 SDAGDVCGK-EKFKESLKKAVEIGFDPTTATFVKALNVLYGLSDKGIENKFNACKRLGLA 278

Query: 271 ---CYDVYRKW---------------------GWSKDEILMAFRKHPHCMILSEEKISKG 330
               + +++KW                     G+S+DE LM  ++ P C+  S E +   
Sbjct: 279 VDDVWAMFKKWPNILTKSEKKIENSVETFLGLGFSRDEFLMMVKRFPQCIGYSTELMKTK 338

Query: 331 MEFFTDKMGQSAGMIAKNPVVLFFSLEKRIIPRCSVIRVLSAKGLMKRDV-SLTTVLLPV 381
            EF   +M      +A  P VL +SLEKR +PRC+VI+VL +KGL++ ++  +++VL   
Sbjct: 339 TEFLVTEMNWPLKAVASIPQVLGYSLEKRTVPRCNVIKVLISKGLLESELPPISSVLTST 398

[Close]

BLAST of Lcy05g006290 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 184.5 bits (467), Expect = 1.6e-46
Identity = 122/379 (32.19%), Postives = 202/379 (53.30%), Query Frame = 0


Query: 38  ITSKFSSEHHSFTISYLIDTCGLLPETAIAASEKVQLHNRERPDSVLALLKSHGFSKSQL 97
           ++ +   + ++FT+SYL+D+ GL  + A + S KV   ++  PDSVL LL SHGF+ SQ+
Sbjct: 42  LSPRVGRKGNNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQI 101

Query: 98  SKLIRKRPSLLLSNANQTLLPKLEFFYSIGVSTPDLARSLTSDPTILTRSLDNQIIPSYR 157
           S +IR  P LL+++A ++L PKL+F  S G S+ ++   ++S P IL +     I   Y 
Sbjct: 102 STIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYD 161

Query: 158 YLKSVLLSDAKVVTALKRTSWIFLKDHSKNLMPNIGVLRDEGVPQPCIALLLTHFPETLL 217
           ++K  LL  +     L  +     + + +N + N+ VLR+ G+P   +  LL    + + 
Sbjct: 162 FIKDTLLEKSSKNEKLCHS---LPQGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVC 221

Query: 218 QKTDKFEEIVAEIKRMGFNPSKSTFVLAMHAISGKGNKSIWNRC-------YDV------ 277
            K +KFEE + ++  MGF+P+ S FV A+  I     K+I  +        +DV      
Sbjct: 222 GK-EKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSS 281

Query: 278 YRKW---------------------GWSKDEILMAFRKHPHCMILSEEKISKGMEFFTDK 337
           ++KW                     G+S+DE     +  P C+ LS E + K  EF   K
Sbjct: 282 FKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKK 341

Query: 338 MGQSAGMIAKNPVVLFFSLEKRIIPRCSVIRVLSAKGLMKRDV-SLTTVLLPVEKRFLET 380
           M      +  NP V  +SLEKRI+PR +VI+ L +KGLM+ ++ S++ VL+  ++ FL  
Sbjct: 342 MNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNR 401

[Close]

BLAST of Lcy05g006290 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 184.5 bits (467), Expect = 1.6e-46
Identity = 122/379 (32.19%), Postives = 202/379 (53.30%), Query Frame = 0


Query: 38  ITSKFSSEHHSFTISYLIDTCGLLPETAIAASEKVQLHNRERPDSVLALLKSHGFSKSQL 97
           ++ +   + ++FT+SYL+D+ GL  + A + S KV   ++  PDSVL LL SHGF+ SQ+
Sbjct: 42  LSPRVGRKGNNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQI 101

Query: 98  SKLIRKRPSLLLSNANQTLLPKLEFFYSIGVSTPDLARSLTSDPTILTRSLDNQIIPSYR 157
           S +IR  P LL+++A ++L PKL+F  S G S+ ++   ++S P IL +     I   Y 
Sbjct: 102 STIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYD 161

Query: 158 YLKSVLLSDAKVVTALKRTSWIFLKDHSKNLMPNIGVLRDEGVPQPCIALLLTHFPETLL 217
           ++K  LL  +     L  +     + + +N + N+ VLR+ G+P   +  LL    + + 
Sbjct: 162 FIKDTLLEKSSKNEKLCHS---LPQGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVC 221

Query: 218 QKTDKFEEIVAEIKRMGFNPSKSTFVLAMHAISGKGNKSIWNRC-------YDV------ 277
            K +KFEE + ++  MGF+P+ S FV A+  I     K+I  +        +DV      
Sbjct: 222 GK-EKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSS 281

Query: 278 YRKW---------------------GWSKDEILMAFRKHPHCMILSEEKISKGMEFFTDK 337
           ++KW                     G+S+DE     +  P C+ LS E + K  EF   K
Sbjct: 282 FKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKK 341

Query: 338 MGQSAGMIAKNPVVLFFSLEKRIIPRCSVIRVLSAKGLMKRDV-SLTTVLLPVEKRFLET 380
           M      +  NP V  +SLEKRI+PR +VI+ L +KGLM+ ++ S++ VL+  ++ FL  
Sbjct: 342 MNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNR 401

The following BLAST results are available for this feature:

BLAST of Lcy05g006290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C6A1	1.8e-10	23.91	Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q84X53	5.5e-07	25.29	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9FM80	4.7e-06	30.49	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4JVI3	6.7e-05	24.16	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	6.7e-05	18.71	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]

BLAST of Lcy05g006290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JU20	4.5e-185	83.29	uncharacterized protein LOC111488362 OS=Cucurbita maxima OX=3661 GN=LOC111488362...	[more]
A0A6J1GNW6	5.8e-185	83.55	uncharacterized protein LOC111455797 OS=Cucurbita moschata OX=3662 GN=LOC1114557...	[more]
A0A7N2N432	2.6e-140	64.56	Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
A0A7J7FTK3	5.5e-135	67.13	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_032214 PE=3 SV=1	[more]
A0A4S4CVI5	1.6e-134	68.00	Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0176...	[more]

BLAST of Lcy05g006290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549206.1	1.4e-185	83.80	uncharacterized protein LOC111807635 [Cucurbita pepo subsp. pepo]	[more]
KAG6575851.1	3.2e-185	83.55	Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyr...	[more]
XP_022991835.1	9.2e-185	83.29	uncharacterized protein LOC111488362 [Cucurbita maxima]	[more]
XP_022953179.1	1.2e-184	83.55	uncharacterized protein LOC111455797 [Cucurbita moschata]	[more]
KAG7014386.1	1.0e-183	83.42	Transcription termination factor MTERF15, mitochondrial, partial [Cucurbita argy...	[more]

BLAST of Lcy05g006290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	9.7e-124	58.56	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	1.1e-58	37.99	Mitochondrial transcription termination factor family protein	[more]
AT1G62120.1	2.3e-48	32.30	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	1.6e-46	32.19	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	1.6e-46	32.19	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 134..165 e-value: 0.027 score: 23.7 coord: 276..307 e-value: 0.2 score: 20.8 coord: 308..342 e-value: 0.25 score: 20.4 coord: 206..236 e-value: 420.0 score: 6.8 coord: 170..201 e-value: 230.0 score: 8.8 coord: 98..129 e-value: 0.002 score: 27.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 84..236 e-value: 4.4E-24 score: 85.0 coord: 261..359 e-value: 4.1E-17 score: 62.1
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 29..381
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 146..374 e-value: 4.1E-48 score: 165.8
None	No IPR available	PANTHER	PTHR13068:SF133	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN	coord: 29..381

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g006290.1	Lcy05g006290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0032502	developmental process
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003690	double-stranded DNA binding