Lcy05g006100 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g006100
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr05: 5692809 .. 5694857 (+)
RNA-Seq Expression	Lcy05g006100
Synteny	Lcy05g006100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCCTTCCAAATAACAGTGATTTATTGCTTTCGACTAAAATTTCACACTTGAACAGTTGATTTCAAGAGCCATTTCATTCATCTGCAGCATCAACAATTCAGTCTAATGACACCTTTTGCCGCACAATTCTGTGCTCAATCAAACAAAATTCTCTCTCTTTTCACCGCTTCTCTTTCCCCAATTCAAATCCCTCAAATTCAAGCTCAACTCATCGTTCAAAACCTCCATTCAAACCCCACCATAGCCCACCACTTCATCAACACTTGCCACTCTCTTCAACTTCTCGATTCCGCTCTTCTCTTCTTCTTCACCCATTTCCCCAATCCCCACGTCTTCATCTGCAATTCCTTAATCAGAGCCTTCTCTCACTCCAAAATCCCCCATACCCCTCTTTCCATTTACGCCCACATGAACAGAAACTCGATTCTTCCCAACAATTACACCTTCCCTTTCCTTCTCAAGTCCTTGGCTGATTTCGGCGACCTTGTGAGTGGGCAATCCGTTCACACCCATGTCCTGAAATTGGGATATGTTTCTGATGTTTATGTGCAGAACTCGTTGATGGACGTTTATGCGTCGTGTGGCAGAATGGGGCTATGCAAGAAGTTGTTCGACGAAATGCCTCAAAGAGATGTTGTGTCGTGGACTGTTTTGATCACGGGTTATCGATGTGCTTTGATGTTTGATGATGCTTTGATTGCGTTTGAGCAGATGCAATATGCGGGTGTGGAGCCTAACCGTGTGACGATGGTGAATGCATTGGCTGCCTGTGCGAGCTTTGGAGCCATTGAAATGGGTGTTTGGATACATGAGTTTGTGAAGAGGAGAGGGTGGGAAGTGGATGTGATTTTGGGGACTTCTTTGATTGATATGTATGGGAAATGTGGGAGAATCAAAGAGGGATTGGTTGTTTTCCAAGCCATGAAAGAGAAGAATGTGTATACATGGAATGCACTCATTAAAGGGCTGGCTTTGGCCAAGAGTGGAGAGGAGGCCATTGCTTGGTTTAAGAAAATGGATAATGAAGGAGTTGAGGCAGATGAGGTGACATTGCTGGCAGTTCTTTGTGCTTGTAGCCACTCTGGCTTGGTGGACATGGGGAGGCGGATCTTTCAATCGTTGTTCGATGGGAGGTTCGGGTTTTCTCCGGGAATCAAACATTATTCATGTATGGTTGATCTCTTGGCTCGTTATGGGTGTATTGAAGAGGCTTTTGAATTGGTAAAGGATATGCCTTTTGATGCCACCAAAGCAATGTGGGGATCTTTGCTAGCTGGTGCCAGAGCTCATGGGAGCTTGGAAGTGAGCGAATTCGCAGCGAAGAAGCTTGTCGAAATGGAGCCAATGAATGGTGCTTATTATGTTGTGTTATCTAACATTTGCGCAGAGATGGGAAGATGGAGTGAGGTTGAGAAAGTGAGAGAGATCATGAAAGAGAGAGGACTGAAGAAGGATTTAGGGTCGAGTTCTGTTGAAGAAACTGTTTTTGAATCGTTTTCTGATGTCATAATATCTGATTAAGAAGAAGGATTTGCATCTCTTCAAACTCTCATTTGAAAGCTTAATCTCTCGACTACGTATTCTCGAAGTTGCGAGACTGACAACCACATTGAATAACTTCTCGGTCTTGAGTAACAGAGTTCCATCCATTGTTGGCTTGCTCAGCTTTCTTAGTAATGGAGATGCTGCATGCCACAGCCGCTAATTGGTACCAAATTTGATGCTGGCTTTGTAAATGCTCTCTTGCTTGCAATGGTTTCAGCTTCAAAGATGAAAGGAGCCAGTGAAAAAAGTTTTAGAAATCTGCATTGGCTGTTTCTTTCAGGTCTGATCTTCAAAGATTTAGAAATTTTAGCAGTCTAAAGAGGGTTTATTATTATTATTTTGTTTCCTTCTCATTTGCATTCCCATTTTTTCATAGAAATAGAGTTGGAGACCGTTGAAGTGTTGATGAACTAAAGTAATCTATATTAGTGAAAAATTAGGATGTACTTGGTCTTATCTGAAAACTGAAATTTGATAAAAGCATAGAAGAATATTTTTTTCT

mRNA sequence

TGCCCTTCCAAATAACAGTGATTTATTGCTTTCGACTAAAATTTCACACTTGAACAGTTGATTTCAAGAGCCATTTCATTCATCTGCAGCATCAACAATTCAGTCTAATGACACCTTTTGCCGCACAATTCTGTGCTCAATCAAACAAAATTCTCTCTCTTTTCACCGCTTCTCTTTCCCCAATTCAAATCCCTCAAATTCAAGCTCAACTCATCGTTCAAAACCTCCATTCAAACCCCACCATAGCCCACCACTTCATCAACACTTGCCACTCTCTTCAACTTCTCGATTCCGCTCTTCTCTTCTTCTTCACCCATTTCCCCAATCCCCACGTCTTCATCTGCAATTCCTTAATCAGAGCCTTCTCTCACTCCAAAATCCCCCATACCCCTCTTTCCATTTACGCCCACATGAACAGAAACTCGATTCTTCCCAACAATTACACCTTCCCTTTCCTTCTCAAGTCCTTGGCTGATTTCGGCGACCTTGTGAGTGGGCAATCCGTTCACACCCATGTCCTGAAATTGGGATATGTTTCTGATGTTTATGTGCAGAACTCGTTGATGGACGTTTATGCGTCGTGTGGCAGAATGGGGCTATGCAAGAAGTTGTTCGACGAAATGCCTCAAAGAGATGTTGTGTCGTGGACTGTTTTGATCACGGGTTATCGATGTGCTTTGATGTTTGATGATGCTTTGATTGCGTTTGAGCAGATGCAATATGCGGGTGTGGAGCCTAACCGTGTGACGATGGTGAATGCATTGGCTGCCTGTGCGAGCTTTGGAGCCATTGAAATGGGTGTTTGGATACATGAGTTTGTGAAGAGGAGAGGGTGGGAAGTGGATGTGATTTTGGGGACTTCTTTGATTGATATGTATGGGAAATGTGGGAGAATCAAAGAGGGATTGGTTGTTTTCCAAGCCATGAAAGAGAAGAATGTGTATACATGGAATGCACTCATTAAAGGGCTGGCTTTGGCCAAGAGTGGAGAGGAGGCCATTGCTTGGTTTAAGAAAATGGATAATGAAGGAGTTGAGGCAGATGAGGTGACATTGCTGGCAGTTCTTTGTGCTTGTAGCCACTCTGGCTTGGTGGACATGGGGAGGCGGATCTTTCAATCGTTGTTCGATGGGAGGTTCGGGTTTTCTCCGGGAATCAAACATTATTCATGTATGGTTGATCTCTTGGCTCGTTATGGGTGTATTGAAGAGGCTTTTGAATTGGTAAAGGATATGCCTTTTGATGCCACCAAAGCAATGTGGGGATCTTTGCTAGCTGGTGCCAGAGCTCATGGGAGCTTGGAAGTGAGCGAATTCGCAGCGAAGAAGCTTGTCGAAATGGAGCCAATGAATGGTGCTTATTATGTTGTGTTATCTAACATTTGCGCAGAGATGGGAAGATGGAGTGAGGTTGAGAAAGTGAGAGAGATCATGAAAGAGAGAGGACTGAAGAAGGATTTAGGGTCGAGTTCTGTTGAAGAAACTGTTTTTGAATCGTTTTCTGATGTCATAATATCTGATTAAGAAGAAGGATTTGCATCTCTTCAAACTCTCATTTGAAAGCTTAATCTCTCGACTACGTATTCTCGAAGTTGCGAGACTGACAACCACATTGAATAACTTCTCGGTCTTGAGTAACAGAGTTCCATCCATTGTTGGCTTGCTCAGCTTTCTTAGTAATGGAGATGCTGCATGCCACAGCCGCTAATTGGTACCAAATTTGATGCTGGCTTTGTAAATGCTCTCTTGCTTGCAATGGTTTCAGCTTCAAAGATGAAAGGAGCCAGTGAAAAAAGTTTTAGAAATCTGCATTGGCTGTTTCTTTCAGGTCTGATCTTCAAAGATTTAGAAATTTTAGCAGTCTAAAGAGGGTTTATTATTATTATTTTGTTTCCTTCTCATTTGCATTCCCATTTTTTCATAGAAATAGAGTTGGAGACCGTTGAAGTGTTGATGAACTAAAGTAATCTATATTAGTGAAAAATTAGGATGTACTTGGTCTTATCTGAAAACTGAAATTTGATAAAAGCATAGAAGAATATTTTTTTCT

Coding sequence (CDS)

ATGACACCTTTTGCCGCACAATTCTGTGCTCAATCAAACAAAATTCTCTCTCTTTTCACCGCTTCTCTTTCCCCAATTCAAATCCCTCAAATTCAAGCTCAACTCATCGTTCAAAACCTCCATTCAAACCCCACCATAGCCCACCACTTCATCAACACTTGCCACTCTCTTCAACTTCTCGATTCCGCTCTTCTCTTCTTCTTCACCCATTTCCCCAATCCCCACGTCTTCATCTGCAATTCCTTAATCAGAGCCTTCTCTCACTCCAAAATCCCCCATACCCCTCTTTCCATTTACGCCCACATGAACAGAAACTCGATTCTTCCCAACAATTACACCTTCCCTTTCCTTCTCAAGTCCTTGGCTGATTTCGGCGACCTTGTGAGTGGGCAATCCGTTCACACCCATGTCCTGAAATTGGGATATGTTTCTGATGTTTATGTGCAGAACTCGTTGATGGACGTTTATGCGTCGTGTGGCAGAATGGGGCTATGCAAGAAGTTGTTCGACGAAATGCCTCAAAGAGATGTTGTGTCGTGGACTGTTTTGATCACGGGTTATCGATGTGCTTTGATGTTTGATGATGCTTTGATTGCGTTTGAGCAGATGCAATATGCGGGTGTGGAGCCTAACCGTGTGACGATGGTGAATGCATTGGCTGCCTGTGCGAGCTTTGGAGCCATTGAAATGGGTGTTTGGATACATGAGTTTGTGAAGAGGAGAGGGTGGGAAGTGGATGTGATTTTGGGGACTTCTTTGATTGATATGTATGGGAAATGTGGGAGAATCAAAGAGGGATTGGTTGTTTTCCAAGCCATGAAAGAGAAGAATGTGTATACATGGAATGCACTCATTAAAGGGCTGGCTTTGGCCAAGAGTGGAGAGGAGGCCATTGCTTGGTTTAAGAAAATGGATAATGAAGGAGTTGAGGCAGATGAGGTGACATTGCTGGCAGTTCTTTGTGCTTGTAGCCACTCTGGCTTGGTGGACATGGGGAGGCGGATCTTTCAATCGTTGTTCGATGGGAGGTTCGGGTTTTCTCCGGGAATCAAACATTATTCATGTATGGTTGATCTCTTGGCTCGTTATGGGTGTATTGAAGAGGCTTTTGAATTGGTAAAGGATATGCCTTTTGATGCCACCAAAGCAATGTGGGGATCTTTGCTAGCTGGTGCCAGAGCTCATGGGAGCTTGGAAGTGAGCGAATTCGCAGCGAAGAAGCTTGTCGAAATGGAGCCAATGAATGGTGCTTATTATGTTGTGTTATCTAACATTTGCGCAGAGATGGGAAGATGGAGTGAGGTTGAGAAAGTGAGAGAGATCATGAAAGAGAGAGGACTGAAGAAGGATTTAGGGTCGAGTTCTGTTGAAGAAACTGTTTTTGAATCGTTTTCTGATGTCATAATATCTGATTAA

Protein sequence

MTPFAAQFCAQSNKILSLFTASLSPIQIPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLLDSALLFFFTHFPNPHVFICNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKSLADFGDLVSGQSVHTHVLKLGYVSDVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDVVSWTVLITGYRCALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRRGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWFKKMDNEGVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHYSCMVDLLARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEPMNGAYYVVLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVEETVFESFSDVIISD

Homology

[Close]

BLAST of Lcy05g006100 vs. ExPASy Swiss-Prot
Match: Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 8.8e-84
Identity = 171/466 (36.70%), Postives = 258/466 (55.36%), Query Frame = 0


Query: 28  IPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLLDSALLFFFTHFPNPHVFICNSLIRAFS 87
           + Q    +I+  L+ +      FI  C +   L  A    FTH P P+ ++ N++IRA S
Sbjct: 31  LKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYA-YSVFTHQPCPNTYLHNTMIRALS 90

Query: 88  HSKIPHT---PLSIYAHMNRNSILPNNYTFPFLLKSLADFGDLVSGQSVHTHVLKLGYVS 147
               P+     +++Y  +      P+ +TFPF+LK      D+  G+ +H  V+  G+ S
Sbjct: 91  LLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDS 150

Query: 148 DVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDV--------------------------- 207
            V+V   L+ +Y SCG +G  +K+FDEM  +DV                           
Sbjct: 151 SVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMP 210

Query: 208 ------VSWTVLITGYRCALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMG 267
                 VSWT +I+GY  +    +A+  F++M    VEP+ VT++  L+ACA  G++E+G
Sbjct: 211 CWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELG 270

Query: 268 VWIHEFVKRRGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALA 327
             I  +V  RG    V L  ++IDMY K G I + L VF+ + E+NV TW  +I GLA  
Sbjct: 271 ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATH 330

Query: 328 KSGEEAIAWFKKMDNEGVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIK 387
             G EA+A F +M   GV  ++VT +A+L ACSH G VD+G+R+F S+   ++G  P I+
Sbjct: 331 GHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSM-RSKYGIHPNIE 390

Query: 388 HYSCMVDLLARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEM 447
           HY CM+DLL R G + EA E++K MPF A  A+WGSLLA +  H  LE+ E A  +L+++
Sbjct: 391 HYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKL 450

Query: 448 EPMNGAYYVVLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
           EP N   Y++L+N+ + +GRW E   +R +MK  G+KK  G SS+E
Sbjct: 451 EPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIE 494

[Close]

BLAST of Lcy05g006100 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.0e-80
Identity = 150/409 (36.67%), Postives = 238/409 (58.19%), Query Frame = 0


Query: 80  NSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKSLADFGDLVSGQSVHTHVLK 139
           N LI  +         + +Y  M    + P++ T   L+ S +  GDL  G+  + +V +
Sbjct: 226 NCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE 285

Query: 140 LGYVSDVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDVVSWTVLITGY-RCAL------M 199
            G    + + N+LMD+++ CG +   +++FD + +R +VSWT +I+GY RC L      +
Sbjct: 286 NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKL 345

Query: 200 FD------------------------DALIAFEQMQYAGVEPNRVTMVNALAACASFGAI 259
           FD                        DAL  F++MQ +  +P+ +TM++ L+AC+  GA+
Sbjct: 346 FDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGAL 405

Query: 260 EMGVWIHEFVKRRGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGL 319
           ++G+WIH ++++    ++V LGTSL+DMY KCG I E L VF  ++ +N  T+ A+I GL
Sbjct: 406 DVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGL 465

Query: 320 ALAKSGEEAIAWFKKMDNEGVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSP 379
           AL      AI++F +M + G+  DE+T + +L AC H G++  GR  F S    RF  +P
Sbjct: 466 ALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYF-SQMKSRFNLNP 525

Query: 380 GIKHYSCMVDLLARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKL 439
            +KHYS MVDLL R G +EEA  L++ MP +A  A+WG+LL G R HG++E+ E AAKKL
Sbjct: 526 QLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKL 585

Query: 440 VEMEPMNGAYYVVLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
           +E++P +   YV+L  +  E   W + ++ R +M ERG++K  G SS+E
Sbjct: 586 LELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIE 633

[Close]

BLAST of Lcy05g006100 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 5.9e-80
Identity = 166/463 (35.85%), Postives = 249/463 (53.78%), Query Frame = 0


Query: 27  QIPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLLD--SALLFFFTHFPNPHVFICNSLIR 86
           ++ QI A+++   L  +      F++ C S    D        F  F  P  F+ N +IR
Sbjct: 29  ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 88

Query: 87  AFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKSLADFGDLVSGQSVHTHVLKLGYVS 146
            FS S  P   L +Y  M  +S   N YTFP LLK+ ++         +H  + KLGY +
Sbjct: 89  GFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148

Query: 147 DVYVQNSLMDVYASCGRMGLCKKLFDEMPQRD---------------------------- 206
           DVY  NSL++ YA  G   L   LFD +P+ D                            
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208

Query: 207 ---VVSWTVLITGYRCALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVW 266
               +SWT +I+GY  A M  +AL  F +MQ + VEP+ V++ NAL+ACA  GA+E G W
Sbjct: 209 EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268

Query: 267 IHEFVKRRGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKS 326
           IH ++ +    +D +LG  LIDMY KCG ++E L VF+ +K+K+V  W ALI G A    
Sbjct: 269 IHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGH 328

Query: 327 GEEAIAWFKKMDNEGVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHY 386
           G EAI+ F +M   G++ + +T  AVL ACS++GLV+ G+ IF S+ +  +   P I+HY
Sbjct: 329 GREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM-ERDYNLKPTIEHY 388

Query: 387 SCMVDLLARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEP 446
            C+VDLL R G ++EA   +++MP      +WG+LL   R H ++E+ E   + L+ ++P
Sbjct: 389 GCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDP 448

Query: 447 MNGAYYVVLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSV 457
            +G  YV  +NI A   +W +  + R +MKE+G+ K  G S++
Sbjct: 449 YHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490

[Close]

BLAST of Lcy05g006100 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 6.5e-79
Identity = 156/460 (33.91%), Postives = 255/460 (55.43%), Query Frame = 0


Query: 30  QIQAQLIVQNLHSNPTIAHHFINTCHSLQLLDSALLFFFTHFPNPHVFICNSLIRAFSHS 89
           +I A +I+  L  +  +    ++ C  ++ +D A    F    NP+VF+ NS+IRA++H+
Sbjct: 28  KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATR-LFNQVSNPNVFLYNSIIRAYTHN 87

Query: 90  KIPHTPLSIYAHMNRNSI-LPNNYTFPFLLKSLADFGDLVSGQSVHTHVLKLGYVSDVYV 149
            +    + IY  + R S  LP+ +TFPF+ KS A  G    G+ VH H+ K G    V  
Sbjct: 88  SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 147

Query: 150 QNSLMDVYASCGRMGLCKKLFDEMPQRDVVSWTVLITGYR-----------CALMFDDAL 209
           +N+L+D+Y     +    K+FDEM +RDV+SW  L++GY              LM D  +
Sbjct: 148 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 207

Query: 210 IA--------------------FEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEF 269
           ++                    F +MQ AG+EP+ +++++ L +CA  G++E+G WIH +
Sbjct: 208 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 267

Query: 270 VKRRGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEA 329
            +RRG+     +  +LI+MY KCG I + + +F  M+ K+V +W+ +I G A   +   A
Sbjct: 268 AERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGA 327

Query: 330 IAWFKKMDNEGVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHYSCMV 389
           I  F +M    V+ + +T L +L ACSH G+   G R F  +    +   P I+HY C++
Sbjct: 328 IETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQD-YQIEPKIEHYGCLI 387

Query: 390 DLLARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEPMNGA 449
           D+LAR G +E A E+ K MP      +WGSLL+  R  G+L+V+  A   LVE+EP +  
Sbjct: 388 DVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMG 447

Query: 450 YYVVLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
            YV+L+NI A++G+W +V ++R++++   +KK  G S +E
Sbjct: 448 NYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIE 485

[Close]

BLAST of Lcy05g006100 vs. ExPASy Swiss-Prot
Match: Q9SN85 (Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H76 PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 8.5e-79
Identity = 160/450 (35.56%), Postives = 251/450 (55.78%), Query Frame = 0


Query: 15  ILSLFTASLSPIQIPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLLDSALLF---FFTHF 74
           +LSL  +S   + + QI A L+  +L  N  + HHF++   +L L+   + +    F+  
Sbjct: 14  LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRL-ALSLIPRDINYSCRVFSQR 73

Query: 75  PNPHVFICNSLIRAFSHSKIPHTPLSIYAHMNRNSILP-NNYTFPFLLKSLADFGDLVSG 134
            NP +  CN++IRAFS S+ P     ++  + RNS LP N  +  F LK     GDL+ G
Sbjct: 74  LNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGG 133

Query: 135 QSVHTHVLKLGYVSDVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDVVSWTVLITGYRCA 194
             +H  +   G++SD  +  +LMD+Y++C       K+FDE+P+RD VSW VL + Y   
Sbjct: 134 LQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRN 193

Query: 195 LMFDDALIAFEQMQY---AGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRRGWEVDV 254
               D L+ F++M+      V+P+ VT + AL ACA+ GA++ G  +H+F+   G    +
Sbjct: 194 KRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGAL 253

Query: 255 ILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWFKKMDNE 314
            L  +L+ MY +CG + +   VF  M+E+NV +W ALI GLA+   G+EAI  F +M   
Sbjct: 254 NLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKF 313

Query: 315 GVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHYSCMVDLLARYGCIE 374
           G+  +E TL  +L ACSHSGLV  G   F  +  G F   P + HY C+VDLL R   ++
Sbjct: 314 GISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLD 373

Query: 375 EAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEPMNGAYYVVLSNICA 434
           +A+ L+K M       +W +LL   R HG +E+ E     L+E++      YV+L N  +
Sbjct: 374 KAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYS 433

Query: 435 EMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
            +G+W +V ++R +MKE+ +    G S++E
Sbjct: 434 TVGKWEKVTELRSLMKEKRIHTKPGCSAIE 462

[Close]

BLAST of Lcy05g006100 vs. ExPASy TrEMBL
Match: A0A6J1JWL5 (pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita maxima OX=3661 GN=LOC111488140 PE=4 SV=1)

HSP 1 Score: 807.7 bits (2085), Expect = 2.5e-230
Identity = 398/458 (86.90%), Postives = 422/458 (92.14%), Query Frame = 0


Query: 1   MTPFAAQFCAQSNKILSLFTASLSPIQIPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLL 60
           M  F  Q  A+SN+ILSLF  SLSPI IPQIQAQLIVQNLHSNPTIAHHFINTCH L+LL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHHLRLL 60

Query: 61  DSALLFFFTHFPNPHVFICNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS 120
           DSAL  FFT  P PHVF+CNSLIRAFSHSKIPHTPLSIYAHMNR SILPNNYTFPFLLKS
Sbjct: 61  DSALR-FFTQIPKPHVFVCNSLIRAFSHSKIPHTPLSIYAHMNRTSILPNNYTFPFLLKS 120

Query: 121 LADFGDLVSGQSVHTHVLKLGYVSDVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDVVSW 180
           LADF  LVSGQSVH HV+KLGYVSDVYVQNSLMDVYASCGRMGLCKK+FDEMP RDVVSW
Sbjct: 121 LADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSW 180

Query: 181 TVLITGYRCALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKR 240
           TVLI GYR ALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIH FVKR
Sbjct: 181 TVLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHAFVKR 240

Query: 241 RGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAW 300
           RGWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNVYTWNALI GLALAKSGEEAIAW
Sbjct: 241 RGWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAW 300

Query: 301 FKKMD-NEGVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHYSCMVDL 360
           FK+MD   GVEADEVTL+ VLCACSHSGLVD+GR+IF S+ DG+FGFSPGI+HYSCMVDL
Sbjct: 301 FKRMDEGGGVEADEVTLVTVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDL 360

Query: 361 LARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEPMNGAYY 420
           LAR GCIEE+FEL+K+MPFDATKAMWGSLLAG+RA GSLE+SEFAA+KLVEMEP NGAYY
Sbjct: 361 LARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEISEFAARKLVEMEPENGAYY 420

Query: 421 VVLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
            VLSNICAEMG+W+EVEKVREIMK  GLKKDLGSSSVE
Sbjct: 421 AVLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVE 457

[Close]

BLAST of Lcy05g006100 vs. ExPASy TrEMBL
Match: A0A6J1D9C2 (pentatricopeptide repeat-containing protein At5g56310-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018217 PE=4 SV=1)

HSP 1 Score: 804.7 bits (2077), Expect = 2.1e-229
Identity = 396/457 (86.65%), Postives = 423/457 (92.56%), Query Frame = 0


Query: 1   MTPFAAQFCAQSNKILSLFTASLSPIQIPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLL 60
           M P AAQ  AQSN+ILSL  ASLSPI IPQIQ+QLI+QNLHS+  IAHHFIN CH L+LL
Sbjct: 3   MKPSAAQLWAQSNRILSLLAASLSPIHIPQIQSQLILQNLHSSTAIAHHFINACHFLRLL 62

Query: 61  DSALLFFFTHFPNPHVFICNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS 120
           DSALL FFTHFPNPHVF+ NSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS
Sbjct: 63  DSALL-FFTHFPNPHVFVFNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS 122

Query: 121 LADFGDLVSGQSVHTHVLKLGYVSDVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDVVSW 180
           L+DF DLV GQSVHTHV+K G+VSDVYVQNSLMDVYASCGRMGLC+K+FDEMPQRDVVSW
Sbjct: 123 LSDFNDLVGGQSVHTHVVKWGFVSDVYVQNSLMDVYASCGRMGLCRKVFDEMPQRDVVSW 182

Query: 181 TVLITGYRCALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKR 240
           TVLI GYR  LMFDDAL+AFE MQYAGVEPN VTMVNALAACA +GAIEMGVWIHEFVKR
Sbjct: 183 TVLIMGYRGGLMFDDALVAFEHMQYAGVEPNCVTMVNALAACAGYGAIEMGVWIHEFVKR 242

Query: 241 RGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAW 300
           RGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNV+TWNALIKGLALAKSGEEAIAW
Sbjct: 243 RGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVFTWNALIKGLALAKSGEEAIAW 302

Query: 301 FKKMDNEGVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHYSCMVDLL 360
           FK+MD EGVEADEVTL+AVLCACSHSGLV+ GR IF++L DG +GFSPGIKH+SCMVDLL
Sbjct: 303 FKRMDEEGVEADEVTLVAVLCACSHSGLVNKGREIFRALVDGSYGFSPGIKHFSCMVDLL 362

Query: 361 ARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEPMNGAYYV 420
           AR GCIEEAF L+KDMPFDATKAMWGSLLAG RA+GSLEVSEFAA+KLVEMEP NGAYYV
Sbjct: 363 ARSGCIEEAFVLIKDMPFDATKAMWGSLLAGGRANGSLEVSEFAARKLVEMEPENGAYYV 422

Query: 421 VLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
           VLSNI AEMGRW EVE+VR+IM+ERGLKKD GSSSVE
Sbjct: 423 VLSNILAEMGRWGEVEEVRDIMRERGLKKDSGSSSVE 458

[Close]

BLAST of Lcy05g006100 vs. ExPASy TrEMBL
Match: A0A6J1D8G0 (pentatricopeptide repeat-containing protein At1g09190-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018217 PE=4 SV=1)

HSP 1 Score: 804.7 bits (2077), Expect = 2.1e-229
Identity = 396/457 (86.65%), Postives = 423/457 (92.56%), Query Frame = 0


Query: 1   MTPFAAQFCAQSNKILSLFTASLSPIQIPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLL 60
           M P AAQ  AQSN+ILSL  ASLSPI IPQIQ+QLI+QNLHS+  IAHHFIN CH L+LL
Sbjct: 87  MKPSAAQLWAQSNRILSLLAASLSPIHIPQIQSQLILQNLHSSTAIAHHFINACHFLRLL 146

Query: 61  DSALLFFFTHFPNPHVFICNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS 120
           DSALL FFTHFPNPHVF+ NSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS
Sbjct: 147 DSALL-FFTHFPNPHVFVFNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS 206

Query: 121 LADFGDLVSGQSVHTHVLKLGYVSDVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDVVSW 180
           L+DF DLV GQSVHTHV+K G+VSDVYVQNSLMDVYASCGRMGLC+K+FDEMPQRDVVSW
Sbjct: 207 LSDFNDLVGGQSVHTHVVKWGFVSDVYVQNSLMDVYASCGRMGLCRKVFDEMPQRDVVSW 266

Query: 181 TVLITGYRCALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKR 240
           TVLI GYR  LMFDDAL+AFE MQYAGVEPN VTMVNALAACA +GAIEMGVWIHEFVKR
Sbjct: 267 TVLIMGYRGGLMFDDALVAFEHMQYAGVEPNCVTMVNALAACAGYGAIEMGVWIHEFVKR 326

Query: 241 RGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAW 300
           RGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNV+TWNALIKGLALAKSGEEAIAW
Sbjct: 327 RGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVFTWNALIKGLALAKSGEEAIAW 386

Query: 301 FKKMDNEGVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHYSCMVDLL 360
           FK+MD EGVEADEVTL+AVLCACSHSGLV+ GR IF++L DG +GFSPGIKH+SCMVDLL
Sbjct: 387 FKRMDEEGVEADEVTLVAVLCACSHSGLVNKGREIFRALVDGSYGFSPGIKHFSCMVDLL 446

Query: 361 ARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEPMNGAYYV 420
           AR GCIEEAF L+KDMPFDATKAMWGSLLAG RA+GSLEVSEFAA+KLVEMEP NGAYYV
Sbjct: 447 ARSGCIEEAFVLIKDMPFDATKAMWGSLLAGGRANGSLEVSEFAARKLVEMEPENGAYYV 506

Query: 421 VLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
           VLSNI AEMGRW EVE+VR+IM+ERGLKKD GSSSVE
Sbjct: 507 VLSNILAEMGRWGEVEEVRDIMRERGLKKDSGSSSVE 542

[Close]

BLAST of Lcy05g006100 vs. ExPASy TrEMBL
Match: A0A6J1GP72 (pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita moschata OX=3662 GN=LOC111456251 PE=4 SV=1)

HSP 1 Score: 803.5 bits (2074), Expect = 4.7e-229
Identity = 397/458 (86.68%), Postives = 423/458 (92.36%), Query Frame = 0


Query: 1   MTPFAAQFCAQSNKILSLFTASLSPIQIPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLL 60
           M  F  Q  A+SN+ILSLF  SLSPI IPQIQAQLIVQNLHSNPTIAHHFINTCH L+LL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60

Query: 61  DSALLFFFTHFPNPHVFICNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS 120
           DSAL  FFT  P PHVF+CNSLIRAFSHSKIP TPLSIYAHMNRNSILPNNYTFPFLLKS
Sbjct: 61  DSALR-FFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKS 120

Query: 121 LADFGDLVSGQSVHTHVLKLGYVSDVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDVVSW 180
           LADF  LVSGQSVH HV+KLGYVSDVYVQNSLMDVYASCGRMGLCKK+FDEMP RDVVSW
Sbjct: 121 LADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSW 180

Query: 181 TVLITGYRCALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKR 240
           TVLI GYR ALMFDDALIAFEQMQYAGV PNRVTMVNALAACASFGAIEMGVWIHEFVKR
Sbjct: 181 TVLIMGYRVALMFDDALIAFEQMQYAGVVPNRVTMVNALAACASFGAIEMGVWIHEFVKR 240

Query: 241 RGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAW 300
           RGWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNVYTWNALI GLALAKSGEEAIAW
Sbjct: 241 RGWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAW 300

Query: 301 FKKMDNE-GVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHYSCMVDL 360
           FK+M+ E G+EADEVTL+AVLCACSHSGLVD+GR+IF S+ DG+FGFSPGI+HYSCMVDL
Sbjct: 301 FKRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDL 360

Query: 361 LARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEPMNGAYY 420
           LAR G IEE+FEL+K+MPFDATKAMWGSLLAG+RA GSLE+SEFAA+KLVEMEP NGAYY
Sbjct: 361 LARSGRIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYY 420

Query: 421 VVLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
            VLSNICAEMG+W+EVEKVREIMK  GLKKDLGSSSVE
Sbjct: 421 AVLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVE 457

[Close]

BLAST of Lcy05g006100 vs. ExPASy TrEMBL
Match: A0A1S3BRY1 (pentatricopeptide repeat-containing protein At5g56310-like OS=Cucumis melo OX=3656 GN=LOC103492838 PE=4 SV=1)

HSP 1 Score: 786.6 bits (2030), Expect = 5.9e-224
Identity = 386/472 (81.78%), Postives = 423/472 (89.62%), Query Frame = 0


Query: 1   MTPFAAQFCAQSNKILSLFTASLSPIQIPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLL 60
           M PF  QF A+S +ILS+FT SLSP+ IPQIQAQLI++NLHS+P IAHHFINTCH L LL
Sbjct: 1   MRPFGTQFRAESTRILSIFTTSLSPVHIPQIQAQLILRNLHSHPLIAHHFINTCHHLHLL 60

Query: 61  DSALLFFFTHFPNPHVFICNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS 120
           DSA L FFTH P PHVFICNSLIRAF+HS IPHTPLSIY HMNRNSI PNNYTFPF+LKS
Sbjct: 61  DSAFL-FFTHIPKPHVFICNSLIRAFAHSNIPHTPLSIYTHMNRNSISPNNYTFPFVLKS 120

Query: 121 LADFGDLVSGQSVHTHVLKLGYVSDVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDVVSW 180
           LADF DLVSGQSVHTHV+KLG+ SD+YVQN+LMDVYASCG+MGLCKK+FDEM QRDVVSW
Sbjct: 121 LADFKDLVSGQSVHTHVVKLGHDSDLYVQNTLMDVYASCGKMGLCKKVFDEMLQRDVVSW 180

Query: 181 TVLITGYRCALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKR 240
           T+LI GYR +LM DDALI FEQMQYAGVEPNRVT+VNALAACASFGAIEMGVWIHEFVK 
Sbjct: 181 TILIMGYRVSLMLDDALIVFEQMQYAGVEPNRVTIVNALAACASFGAIEMGVWIHEFVKT 240

Query: 241 RGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAW 300
           + WEVDV+LGT+LIDMYGKCGRIKE L VFQAMKEKNVYTWN LI GLALAKSGEEAIAW
Sbjct: 241 KRWEVDVVLGTALIDMYGKCGRIKEALAVFQAMKEKNVYTWNVLINGLALAKSGEEAIAW 300

Query: 301 FKKMDNEGVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHYSCMVDLL 360
           FK+MD EGVEAD+VTL+AVLCACSHSGLV+ GR+IF+SL  GRFGFSP IKHYSCMVD+L
Sbjct: 301 FKRMDEEGVEADDVTLVAVLCACSHSGLVNSGRQIFRSLIHGRFGFSPEIKHYSCMVDIL 360

Query: 361 ARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEPMNGAYYV 420
           AR GCIEEAF ++KDMPF+ATKAMWGSLL G+RAHG+LEVSE AA+KLVEMEP NGAYYV
Sbjct: 361 ARNGCIEEAFVMIKDMPFEATKAMWGSLLTGSRAHGNLEVSEIAARKLVEMEPENGAYYV 420

Query: 421 VLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVE----ETVFESFSDVI 469
           VLSNI AEMG+WSEVEKVREIMKERGLKKDLGSSSVE        ESFS+V+
Sbjct: 421 VLSNIYAEMGKWSEVEKVREIMKERGLKKDLGSSSVELQEAGNTRESFSNVL 471

[Close]

BLAST of Lcy05g006100 vs. NCBI nr
Match: XP_038898992.1 (pentatricopeptide repeat-containing protein At5g56310-like [Benincasa hispida])

HSP 1 Score: 837.0 bits (2161), Expect = 7.9e-239
Identity = 410/457 (89.72%), Postives = 431/457 (94.31%), Query Frame = 0


Query: 1   MTPFAAQFCAQSNKILSLFTASLSPIQIPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLL 60
           MTPF AQF A+SN+ILS+FT SLSPI IPQIQAQLI+QNLHSNPTIAHHFINTCH LQLL
Sbjct: 1   MTPFTAQFRAESNRILSVFTTSLSPIHIPQIQAQLILQNLHSNPTIAHHFINTCHHLQLL 60

Query: 61  DSALLFFFTHFPNPHVFICNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS 120
           DSALL FF H P PHVF+CNSLIRAFSHSKIPHTPLSIY HMNRNSI PNNYTFPFLLKS
Sbjct: 61  DSALL-FFNHIPKPHVFVCNSLIRAFSHSKIPHTPLSIYTHMNRNSIFPNNYTFPFLLKS 120

Query: 121 LADFGDLVSGQSVHTHVLKLGYVSDVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDVVSW 180
           LADF DLVSGQSVHTHVLKLGYV+DVYVQNSLMDVYASCG+MGLCKK+FDEMPQRDVVSW
Sbjct: 121 LADFNDLVSGQSVHTHVLKLGYVADVYVQNSLMDVYASCGKMGLCKKVFDEMPQRDVVSW 180

Query: 181 TVLITGYRCALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKR 240
           TVLI GYR +LMFDDALIAFEQMQYAGVEPNRVTMVNALAACA+FGAIEMGVWIHEFVKR
Sbjct: 181 TVLIMGYRVSLMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKR 240

Query: 241 RGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAW 300
           +GWE+DVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAW
Sbjct: 241 KGWEMDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAW 300

Query: 301 FKKMDNEGVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHYSCMVDLL 360
           F +MD EGVE DEVTL+AVLCACSHSGLVDMG++IFQSL D RFGFSPGIKHYSCMVDLL
Sbjct: 301 FNRMDEEGVEPDEVTLVAVLCACSHSGLVDMGKQIFQSLTDRRFGFSPGIKHYSCMVDLL 360

Query: 361 ARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEPMNGAYYV 420
           ARYGCIE AF L+KDMPF+ATKAMWGSLLAG+RAHG LEVSE AAKKLVEMEP NGAYYV
Sbjct: 361 ARYGCIEAAFVLIKDMPFEATKAMWGSLLAGSRAHGGLEVSEIAAKKLVEMEPENGAYYV 420

Query: 421 VLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
           VLSNI AEM +WSEVEKVRE+MKERGLKKDLGSSSVE
Sbjct: 421 VLSNIYAEMEKWSEVEKVREMMKERGLKKDLGSSSVE 456

[Close]

BLAST of Lcy05g006100 vs. NCBI nr
Match: XP_023548659.1 (pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita pepo subsp. pepo] >XP_023548660.1 pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 813.9 bits (2101), Expect = 7.1e-232
Identity = 399/458 (87.12%), Postives = 427/458 (93.23%), Query Frame = 0


Query: 1   MTPFAAQFCAQSNKILSLFTASLSPIQIPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLL 60
           M  F  Q  A+SN+ILSLF  SLSPI IPQIQAQLIVQNLHSNPTIAHHFINTCH L+LL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60

Query: 61  DSALLFFFTHFPNPHVFICNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS 120
           DSALL FFT  P PHVF+CNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS
Sbjct: 61  DSALL-FFTQIPKPHVFVCNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS 120

Query: 121 LADFGDLVSGQSVHTHVLKLGYVSDVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDVVSW 180
           LADF  LVSGQSVH HV+KLGYVSDVYVQNSLMDVYASCGRMGLCKK+FDEMP RDVVSW
Sbjct: 121 LADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSW 180

Query: 181 TVLITGYRCALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKR 240
           TVLI GYR ALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMG+WIHEFVKR
Sbjct: 181 TVLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGIWIHEFVKR 240

Query: 241 RGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAW 300
           RGWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNVYTWNALI GLALAKSGEEAIAW
Sbjct: 241 RGWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAW 300

Query: 301 FKKMDNE-GVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHYSCMVDL 360
           FK+MD + GV+ADEVTL+AVLCACSHSGLVD+GR+IF S+ DG+FGFSPGI+HYSCMVDL
Sbjct: 301 FKRMDEDGGVKADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDL 360

Query: 361 LARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEPMNGAYY 420
           LAR GCIEE+FEL+K+MPFDATKAMWGSLLAG+RA GSLE+SEFAA+KLVEMEP NGAYY
Sbjct: 361 LARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYY 420

Query: 421 VVLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
            VLSNICAEMG+W+EVEKVR+IMK  GLKKDLGSSSVE
Sbjct: 421 AVLSNICAEMGKWNEVEKVRKIMKVEGLKKDLGSSSVE 457

[Close]

BLAST of Lcy05g006100 vs. NCBI nr
Match: KAG6575842.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014378.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 810.8 bits (2093), Expect = 6.0e-231
Identity = 399/458 (87.12%), Postives = 425/458 (92.79%), Query Frame = 0


Query: 1   MTPFAAQFCAQSNKILSLFTASLSPIQIPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLL 60
           M  F  Q  A+SN+ILSLF  SLSPI IPQIQAQLIVQNLHSNPTIAHHFINTCH L+LL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60

Query: 61  DSALLFFFTHFPNPHVFICNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS 120
           DSAL  FFT  P PHVF+CNSLIRAFSHSKIP TPLSIYAHMNRNSILPNNYTFPFLLKS
Sbjct: 61  DSALR-FFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKS 120

Query: 121 LADFGDLVSGQSVHTHVLKLGYVSDVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDVVSW 180
           LADF  LVSGQSVH HV+KLGYVSDVYVQNSLMDVYASCGRMGLCKK+FDEMP RDVVSW
Sbjct: 121 LADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSW 180

Query: 181 TVLITGYRCALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKR 240
           TVLI GYR ALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKR
Sbjct: 181 TVLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKR 240

Query: 241 RGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAW 300
           RGWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNVYTWNALI GLALAKSGEEAIAW
Sbjct: 241 RGWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAW 300

Query: 301 FKKMDNE-GVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHYSCMVDL 360
           FK+M+ E G+EADEVTL+AVLCACSHSGLVD+GR+IF S+ DG+FGFSPGI+HYSCMVDL
Sbjct: 301 FKRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDL 360

Query: 361 LARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEPMNGAYY 420
           LAR GCIEE+FEL+K+MPFDATKAMWGSLLAG+RA GSLE+SEFAA+KLVEMEP NGAYY
Sbjct: 361 LARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYY 420

Query: 421 VVLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
            VLSNICAEMG+W+EVEKVREIMK  GLKKDLGSSSVE
Sbjct: 421 AVLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVE 457

[Close]

BLAST of Lcy05g006100 vs. NCBI nr
Match: XP_022991568.1 (pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita maxima])

HSP 1 Score: 807.7 bits (2085), Expect = 5.1e-230
Identity = 398/458 (86.90%), Postives = 422/458 (92.14%), Query Frame = 0


Query: 1   MTPFAAQFCAQSNKILSLFTASLSPIQIPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLL 60
           M  F  Q  A+SN+ILSLF  SLSPI IPQIQAQLIVQNLHSNPTIAHHFINTCH L+LL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHHLRLL 60

Query: 61  DSALLFFFTHFPNPHVFICNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS 120
           DSAL  FFT  P PHVF+CNSLIRAFSHSKIPHTPLSIYAHMNR SILPNNYTFPFLLKS
Sbjct: 61  DSALR-FFTQIPKPHVFVCNSLIRAFSHSKIPHTPLSIYAHMNRTSILPNNYTFPFLLKS 120

Query: 121 LADFGDLVSGQSVHTHVLKLGYVSDVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDVVSW 180
           LADF  LVSGQSVH HV+KLGYVSDVYVQNSLMDVYASCGRMGLCKK+FDEMP RDVVSW
Sbjct: 121 LADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSW 180

Query: 181 TVLITGYRCALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKR 240
           TVLI GYR ALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIH FVKR
Sbjct: 181 TVLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHAFVKR 240

Query: 241 RGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAW 300
           RGWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNVYTWNALI GLALAKSGEEAIAW
Sbjct: 241 RGWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAW 300

Query: 301 FKKMD-NEGVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHYSCMVDL 360
           FK+MD   GVEADEVTL+ VLCACSHSGLVD+GR+IF S+ DG+FGFSPGI+HYSCMVDL
Sbjct: 301 FKRMDEGGGVEADEVTLVTVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDL 360

Query: 361 LARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEPMNGAYY 420
           LAR GCIEE+FEL+K+MPFDATKAMWGSLLAG+RA GSLE+SEFAA+KLVEMEP NGAYY
Sbjct: 361 LARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEISEFAARKLVEMEPENGAYY 420

Query: 421 VVLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
            VLSNICAEMG+W+EVEKVREIMK  GLKKDLGSSSVE
Sbjct: 421 AVLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVE 457

[Close]

BLAST of Lcy05g006100 vs. NCBI nr
Match: XP_022149919.1 (pentatricopeptide repeat-containing protein At1g09190-like isoform X1 [Momordica charantia])

HSP 1 Score: 804.7 bits (2077), Expect = 4.3e-229
Identity = 396/457 (86.65%), Postives = 423/457 (92.56%), Query Frame = 0


Query: 1   MTPFAAQFCAQSNKILSLFTASLSPIQIPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLL 60
           M P AAQ  AQSN+ILSL  ASLSPI IPQIQ+QLI+QNLHS+  IAHHFIN CH L+LL
Sbjct: 87  MKPSAAQLWAQSNRILSLLAASLSPIHIPQIQSQLILQNLHSSTAIAHHFINACHFLRLL 146

Query: 61  DSALLFFFTHFPNPHVFICNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS 120
           DSALL FFTHFPNPHVF+ NSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS
Sbjct: 147 DSALL-FFTHFPNPHVFVFNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKS 206

Query: 121 LADFGDLVSGQSVHTHVLKLGYVSDVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDVVSW 180
           L+DF DLV GQSVHTHV+K G+VSDVYVQNSLMDVYASCGRMGLC+K+FDEMPQRDVVSW
Sbjct: 207 LSDFNDLVGGQSVHTHVVKWGFVSDVYVQNSLMDVYASCGRMGLCRKVFDEMPQRDVVSW 266

Query: 181 TVLITGYRCALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKR 240
           TVLI GYR  LMFDDAL+AFE MQYAGVEPN VTMVNALAACA +GAIEMGVWIHEFVKR
Sbjct: 267 TVLIMGYRGGLMFDDALVAFEHMQYAGVEPNCVTMVNALAACAGYGAIEMGVWIHEFVKR 326

Query: 241 RGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAW 300
           RGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNV+TWNALIKGLALAKSGEEAIAW
Sbjct: 327 RGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVFTWNALIKGLALAKSGEEAIAW 386

Query: 301 FKKMDNEGVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHYSCMVDLL 360
           FK+MD EGVEADEVTL+AVLCACSHSGLV+ GR IF++L DG +GFSPGIKH+SCMVDLL
Sbjct: 387 FKRMDEEGVEADEVTLVAVLCACSHSGLVNKGREIFRALVDGSYGFSPGIKHFSCMVDLL 446

Query: 361 ARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEPMNGAYYV 420
           AR GCIEEAF L+KDMPFDATKAMWGSLLAG RA+GSLEVSEFAA+KLVEMEP NGAYYV
Sbjct: 447 ARSGCIEEAFVLIKDMPFDATKAMWGSLLAGGRANGSLEVSEFAARKLVEMEPENGAYYV 506

Query: 421 VLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
           VLSNI AEMGRW EVE+VR+IM+ERGLKKD GSSSVE
Sbjct: 507 VLSNILAEMGRWGEVEEVRDIMRERGLKKDSGSSSVE 542

[Close]

BLAST of Lcy05g006100 vs. TAIR 10
Match: AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 312.4 bits (799), Expect = 6.3e-85
Identity = 171/466 (36.70%), Postives = 258/466 (55.36%), Query Frame = 0


Query: 28  IPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLLDSALLFFFTHFPNPHVFICNSLIRAFS 87
           + Q    +I+  L+ +      FI  C +   L  A    FTH P P+ ++ N++IRA S
Sbjct: 31  LKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYA-YSVFTHQPCPNTYLHNTMIRALS 90

Query: 88  HSKIPHT---PLSIYAHMNRNSILPNNYTFPFLLKSLADFGDLVSGQSVHTHVLKLGYVS 147
               P+     +++Y  +      P+ +TFPF+LK      D+  G+ +H  V+  G+ S
Sbjct: 91  LLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDS 150

Query: 148 DVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDV--------------------------- 207
            V+V   L+ +Y SCG +G  +K+FDEM  +DV                           
Sbjct: 151 SVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMP 210

Query: 208 ------VSWTVLITGYRCALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMG 267
                 VSWT +I+GY  +    +A+  F++M    VEP+ VT++  L+ACA  G++E+G
Sbjct: 211 CWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELG 270

Query: 268 VWIHEFVKRRGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALA 327
             I  +V  RG    V L  ++IDMY K G I + L VF+ + E+NV TW  +I GLA  
Sbjct: 271 ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATH 330

Query: 328 KSGEEAIAWFKKMDNEGVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIK 387
             G EA+A F +M   GV  ++VT +A+L ACSH G VD+G+R+F S+   ++G  P I+
Sbjct: 331 GHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSM-RSKYGIHPNIE 390

Query: 388 HYSCMVDLLARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEM 447
           HY CM+DLL R G + EA E++K MPF A  A+WGSLLA +  H  LE+ E A  +L+++
Sbjct: 391 HYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKL 450

Query: 448 EPMNGAYYVVLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
           EP N   Y++L+N+ + +GRW E   +R +MK  G+KK  G SS+E
Sbjct: 451 EPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIE 494

[Close]

BLAST of Lcy05g006100 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 301.2 bits (770), Expect = 1.4e-81
Identity = 150/409 (36.67%), Postives = 238/409 (58.19%), Query Frame = 0


Query: 80  NSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKSLADFGDLVSGQSVHTHVLK 139
           N LI  +         + +Y  M    + P++ T   L+ S +  GDL  G+  + +V +
Sbjct: 226 NCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE 285

Query: 140 LGYVSDVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDVVSWTVLITGY-RCAL------M 199
            G    + + N+LMD+++ CG +   +++FD + +R +VSWT +I+GY RC L      +
Sbjct: 286 NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKL 345

Query: 200 FD------------------------DALIAFEQMQYAGVEPNRVTMVNALAACASFGAI 259
           FD                        DAL  F++MQ +  +P+ +TM++ L+AC+  GA+
Sbjct: 346 FDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGAL 405

Query: 260 EMGVWIHEFVKRRGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGL 319
           ++G+WIH ++++    ++V LGTSL+DMY KCG I E L VF  ++ +N  T+ A+I GL
Sbjct: 406 DVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGL 465

Query: 320 ALAKSGEEAIAWFKKMDNEGVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSP 379
           AL      AI++F +M + G+  DE+T + +L AC H G++  GR  F S    RF  +P
Sbjct: 466 ALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYF-SQMKSRFNLNP 525

Query: 380 GIKHYSCMVDLLARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKL 439
            +KHYS MVDLL R G +EEA  L++ MP +A  A+WG+LL G R HG++E+ E AAKKL
Sbjct: 526 QLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKL 585

Query: 440 VEMEPMNGAYYVVLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
           +E++P +   YV+L  +  E   W + ++ R +M ERG++K  G SS+E
Sbjct: 586 LELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIE 633

[Close]

BLAST of Lcy05g006100 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 299.7 bits (766), Expect = 4.2e-81
Identity = 166/463 (35.85%), Postives = 249/463 (53.78%), Query Frame = 0


Query: 27  QIPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLLD--SALLFFFTHFPNPHVFICNSLIR 86
           ++ QI A+++   L  +      F++ C S    D        F  F  P  F+ N +IR
Sbjct: 29  ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 88

Query: 87  AFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKSLADFGDLVSGQSVHTHVLKLGYVS 146
            FS S  P   L +Y  M  +S   N YTFP LLK+ ++         +H  + KLGY +
Sbjct: 89  GFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148

Query: 147 DVYVQNSLMDVYASCGRMGLCKKLFDEMPQRD---------------------------- 206
           DVY  NSL++ YA  G   L   LFD +P+ D                            
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208

Query: 207 ---VVSWTVLITGYRCALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVW 266
               +SWT +I+GY  A M  +AL  F +MQ + VEP+ V++ NAL+ACA  GA+E G W
Sbjct: 209 EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268

Query: 267 IHEFVKRRGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKS 326
           IH ++ +    +D +LG  LIDMY KCG ++E L VF+ +K+K+V  W ALI G A    
Sbjct: 269 IHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGH 328

Query: 327 GEEAIAWFKKMDNEGVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHY 386
           G EAI+ F +M   G++ + +T  AVL ACS++GLV+ G+ IF S+ +  +   P I+HY
Sbjct: 329 GREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM-ERDYNLKPTIEHY 388

Query: 387 SCMVDLLARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEP 446
            C+VDLL R G ++EA   +++MP      +WG+LL   R H ++E+ E   + L+ ++P
Sbjct: 389 GCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDP 448

Query: 447 MNGAYYVVLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSV 457
            +G  YV  +NI A   +W +  + R +MKE+G+ K  G S++
Sbjct: 449 YHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490

[Close]

BLAST of Lcy05g006100 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 296.2 bits (757), Expect = 4.7e-80
Identity = 156/460 (33.91%), Postives = 255/460 (55.43%), Query Frame = 0


Query: 30  QIQAQLIVQNLHSNPTIAHHFINTCHSLQLLDSALLFFFTHFPNPHVFICNSLIRAFSHS 89
           +I A +I+  L  +  +    ++ C  ++ +D A    F    NP+VF+ NS+IRA++H+
Sbjct: 28  KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATR-LFNQVSNPNVFLYNSIIRAYTHN 87

Query: 90  KIPHTPLSIYAHMNRNSI-LPNNYTFPFLLKSLADFGDLVSGQSVHTHVLKLGYVSDVYV 149
            +    + IY  + R S  LP+ +TFPF+ KS A  G    G+ VH H+ K G    V  
Sbjct: 88  SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 147

Query: 150 QNSLMDVYASCGRMGLCKKLFDEMPQRDVVSWTVLITGYR-----------CALMFDDAL 209
           +N+L+D+Y     +    K+FDEM +RDV+SW  L++GY              LM D  +
Sbjct: 148 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 207

Query: 210 IA--------------------FEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEF 269
           ++                    F +MQ AG+EP+ +++++ L +CA  G++E+G WIH +
Sbjct: 208 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 267

Query: 270 VKRRGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEA 329
            +RRG+     +  +LI+MY KCG I + + +F  M+ K+V +W+ +I G A   +   A
Sbjct: 268 AERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGA 327

Query: 330 IAWFKKMDNEGVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHYSCMV 389
           I  F +M    V+ + +T L +L ACSH G+   G R F  +    +   P I+HY C++
Sbjct: 328 IETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQD-YQIEPKIEHYGCLI 387

Query: 390 DLLARYGCIEEAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEPMNGA 449
           D+LAR G +E A E+ K MP      +WGSLL+  R  G+L+V+  A   LVE+EP +  
Sbjct: 388 DVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMG 447

Query: 450 YYVVLSNICAEMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
            YV+L+NI A++G+W +V ++R++++   +KK  G S +E
Sbjct: 448 NYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIE 485

[Close]

BLAST of Lcy05g006100 vs. TAIR 10
Match: AT3G47530.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 295.8 bits (756), Expect = 6.1e-80
Identity = 160/450 (35.56%), Postives = 251/450 (55.78%), Query Frame = 0


Query: 15  ILSLFTASLSPIQIPQIQAQLIVQNLHSNPTIAHHFINTCHSLQLLDSALLF---FFTHF 74
           +LSL  +S   + + QI A L+  +L  N  + HHF++   +L L+   + +    F+  
Sbjct: 14  LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRL-ALSLIPRDINYSCRVFSQR 73

Query: 75  PNPHVFICNSLIRAFSHSKIPHTPLSIYAHMNRNSILP-NNYTFPFLLKSLADFGDLVSG 134
            NP +  CN++IRAFS S+ P     ++  + RNS LP N  +  F LK     GDL+ G
Sbjct: 74  LNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGG 133

Query: 135 QSVHTHVLKLGYVSDVYVQNSLMDVYASCGRMGLCKKLFDEMPQRDVVSWTVLITGYRCA 194
             +H  +   G++SD  +  +LMD+Y++C       K+FDE+P+RD VSW VL + Y   
Sbjct: 134 LQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRN 193

Query: 195 LMFDDALIAFEQMQY---AGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRRGWEVDV 254
               D L+ F++M+      V+P+ VT + AL ACA+ GA++ G  +H+F+   G    +
Sbjct: 194 KRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGAL 253

Query: 255 ILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWFKKMDNE 314
            L  +L+ MY +CG + +   VF  M+E+NV +W ALI GLA+   G+EAI  F +M   
Sbjct: 254 NLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKF 313

Query: 315 GVEADEVTLLAVLCACSHSGLVDMGRRIFQSLFDGRFGFSPGIKHYSCMVDLLARYGCIE 374
           G+  +E TL  +L ACSHSGLV  G   F  +  G F   P + HY C+VDLL R   ++
Sbjct: 314 GISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLD 373

Query: 375 EAFELVKDMPFDATKAMWGSLLAGARAHGSLEVSEFAAKKLVEMEPMNGAYYVVLSNICA 434
           +A+ L+K M       +W +LL   R HG +E+ E     L+E++      YV+L N  +
Sbjct: 374 KAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYS 433

Query: 435 EMGRWSEVEKVREIMKERGLKKDLGSSSVE 458
            +G+W +V ++R +MKE+ +    G S++E
Sbjct: 434 TVGKWEKVTELRSLMKEKRIHTKPGCSAIE 462

The following BLAST results are available for this feature:

BLAST of Lcy05g006100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMA1	8.8e-84	36.70	Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX...	[more]
Q9SJZ3	2.0e-80	36.67	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop...	[more]
Q9FJY7	5.9e-80	35.85	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q9SIL5	6.5e-79	33.91	Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX...	[more]
Q9SN85	8.5e-79	35.56	Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX...	[more]

BLAST of Lcy05g006100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JWL5	2.5e-230	86.90	pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita maxima O...	[more]
A0A6J1D9C2	2.1e-229	86.65	pentatricopeptide repeat-containing protein At5g56310-like isoform X2 OS=Momordi...	[more]
A0A6J1D8G0	2.1e-229	86.65	pentatricopeptide repeat-containing protein At1g09190-like isoform X1 OS=Momordi...	[more]
A0A6J1GP72	4.7e-229	86.68	pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita moschata...	[more]
A0A1S3BRY1	5.9e-224	81.78	pentatricopeptide repeat-containing protein At5g56310-like OS=Cucumis melo OX=36...	[more]

BLAST of Lcy05g006100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898992.1	7.9e-239	89.72	pentatricopeptide repeat-containing protein At5g56310-like [Benincasa hispida]	[more]
XP_023548659.1	7.1e-232	87.12	pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita pepo subsp...	[more]
KAG6575842.1	6.0e-231	87.12	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022991568.1	5.1e-230	86.90	pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita maxima]	[more]
XP_022149919.1	4.3e-229	86.65	pentatricopeptide repeat-containing protein At1g09190-like isoform X1 [Momordica...	[more]

BLAST of Lcy05g006100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56310.1	6.3e-85	36.70	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G22410.1	1.4e-81	36.67	SLOW GROWTH 1	[more]
AT5G66520.1	4.2e-81	35.85	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20540.1	4.7e-80	33.91	mitochondrial editing factor 21	[more]
AT3G47530.1	6.1e-80	35.56	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 344..467 e-value: 2.6E-10 score: 42.2 coord: 229..343 e-value: 1.8E-26 score: 95.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 136..228 e-value: 5.8E-21 score: 76.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 67..135 e-value: 4.5E-5 score: 25.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 352..376 e-value: 0.0028 score: 17.8 coord: 150..176 e-value: 3.0E-4 score: 20.8 coord: 178..208 e-value: 0.0018 score: 18.4 coord: 419..447 e-value: 0.26 score: 11.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 276..323 e-value: 3.0E-8 score: 33.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 148..177 e-value: 3.7E-4 score: 18.5 coord: 279..313 e-value: 8.8E-7 score: 26.7 coord: 251..278 e-value: 3.7E-4 score: 18.5 coord: 353..376 e-value: 0.001 score: 17.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 277..311 score: 10.709248
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 176..210 score: 9.952918
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 246..276 score: 8.593717
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 415..449 score: 8.516988
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 6..459
None	No IPR available	PANTHER	PTHR47924:SF31	SUBFAMILY NOT NAMED	coord: 6..459

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g006100.1	Lcy05g006100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006749	glutathione metabolic process
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding