Lcy05g005310 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGCGTTCCTAGGGCAAATCAATATCTCAGGTATGGAATCCGATTCGCGAAACACGATGATCGACGAGAGGAAGAGGAAGAGGATGGAATCGAATCGAGAATCCGCTCGACGATCGCGAATGAAAAAGCAGAAGCGATTGGAAGATCTAGCAAACGAAGTGAGCCGTTTACAAATTGTGAACAGCCGACTTGTAGAACGCATCAATGGCGAGGAACAAGCGCGTATTGAAATTGGATTGGCGAACAATCTCTTGAGAGTTGAAGCAATGGAAATGACTTACCGGCTCAGAGCCCAAAATTTGGTGCTTCAGATCGTCGATGATGCGAATGCGAATGCGCTTGCGGCTGATGTTCTTGATGTTCATGATCCTCTGCTGGAACCTTGGCAATTCAACCTGCCAATGCAGCCGTCGGCGGCGGATTACGATACGTTTCTGGTTTGA ATGGCCGCGTTCCTAGGGCAAATCAATATCTCAGGTATGGAATCCGATTCGCGAAACACGATGATCGACGAGAGGAAGAGGAAGAGGATGGAATCGAATCGAGAATCCGCTCGACGATCGCGAATGAAAAAGCAGAAGCGATTGGAAGATCTAGCAAACGAAGTGAGCCGTTTACAAATTGTGAACAGCCGACTTGTAGAACGCATCAATGGCGAGGAACAAGCGCGTATTGAAATTGGATTGGCGAACAATCTCTTGAGAGTTGAAGCAATGGAAATGACTTACCGGCTCAGAGCCCAAAATTTGGTGCTTCAGATCGTCGATGATGCGAATGCGAATGCGCTTGCGGCTGATGTTCTTGATGTTCATGATCCTCTGCTGGAACCTTGGCAATTCAACCTGCCAATGCAGCCGTCGGCGGCGGATTACGATACGTTTCTGGTTTGA ATGGCCGCGTTCCTAGGGCAAATCAATATCTCAGGTATGGAATCCGATTCGCGAAACACGATGATCGACGAGAGGAAGAGGAAGAGGATGGAATCGAATCGAGAATCCGCTCGACGATCGCGAATGAAAAAGCAGAAGCGATTGGAAGATCTAGCAAACGAAGTGAGCCGTTTACAAATTGTGAACAGCCGACTTGTAGAACGCATCAATGGCGAGGAACAAGCGCGTATTGAAATTGGATTGGCGAACAATCTCTTGAGAGTTGAAGCAATGGAAATGACTTACCGGCTCAGAGCCCAAAATTTGGTGCTTCAGATCGTCGATGATGCGAATGCGAATGCGCTTGCGGCTGATGTTCTTGATGTTCATGATCCTCTGCTGGAACCTTGGCAATTCAACCTGCCAATGCAGCCGTCGGCGGCGGATTACGATACGTTTCTGGTTTGA MAAFLGQINISGMESDSRNTMIDERKRKRMESNRESARRSRMKKQKRLEDLANEVSRLQIVNSRLVERINGEEQARIEIGLANNLLRVEAMEMTYRLRAQNLVLQIVDDANANALAADVLDVHDPLLEPWQFNLPMQPSAADYDTFLV Homology
BLAST of Lcy05g005310 vs. ExPASy Swiss-Prot
Match: Q9LZP8 (bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.5e-21 Identity = 61/127 (48.03%), Postives = 88/127 (69.29%), Query Frame = 0
BLAST of Lcy05g005310 vs. ExPASy Swiss-Prot
Match: C0Z2L5 (bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.2e-12 Identity = 46/103 (44.66%), Postives = 71/103 (68.93%), Query Frame = 0
BLAST of Lcy05g005310 vs. ExPASy Swiss-Prot
Match: P24068 (Ocs element-binding factor 1 OS=Zea mays OX=4577 GN=OBF1 PE=2 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11 Identity = 48/122 (39.34%), Postives = 70/122 (57.38%), Query Frame = 0
BLAST of Lcy05g005310 vs. ExPASy Swiss-Prot
Match: O65683 (bZIP transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=BZIP11 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.1e-11 Identity = 41/99 (41.41%), Postives = 68/99 (68.69%), Query Frame = 0
BLAST of Lcy05g005310 vs. ExPASy Swiss-Prot
Match: Q9SI15 (bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.9e-08 Identity = 42/107 (39.25%), Postives = 68/107 (63.55%), Query Frame = 0
BLAST of Lcy05g005310 vs. ExPASy TrEMBL
Match: A0A5D3D3X1 (BZIP transcription factor 53-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001690 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 8.2e-31 Identity = 88/134 (65.67%), Postives = 99/134 (73.88%), Query Frame = 0
BLAST of Lcy05g005310 vs. ExPASy TrEMBL
Match: A0A1S3BS27 (bZIP transcription factor 53-like OS=Cucumis melo OX=3656 GN=LOC103492885 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 8.2e-31 Identity = 88/134 (65.67%), Postives = 99/134 (73.88%), Query Frame = 0
BLAST of Lcy05g005310 vs. ExPASy TrEMBL
Match: A0A6A1VGC1 (Ocs element-binding factor 1 OS=Morella rubra OX=262757 GN=CJ030_MR6G022742 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 4.1e-30 Identity = 79/137 (57.66%), Postives = 101/137 (73.72%), Query Frame = 0
BLAST of Lcy05g005310 vs. ExPASy TrEMBL
Match: A0A0A0K6D0 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G407660 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 1.2e-29 Identity = 90/147 (61.22%), Postives = 103/147 (70.07%), Query Frame = 0
BLAST of Lcy05g005310 vs. ExPASy TrEMBL
Match: A0A2I4DMX9 (bZIP transcription factor 53 OS=Juglans regia OX=51240 GN=LOC108981706 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.7e-28 Identity = 76/137 (55.47%), Postives = 100/137 (72.99%), Query Frame = 0
BLAST of Lcy05g005310 vs. NCBI nr
Match: XP_038900030.1 (bZIP transcription factor 53-like [Benincasa hispida]) HSP 1 Score: 179.9 bits (455), Expect = 1.6e-41 Identity = 108/149 (72.48%), Postives = 118/149 (79.19%), Query Frame = 0
BLAST of Lcy05g005310 vs. NCBI nr
Match: KGN45565.2 (hypothetical protein Csa_016340 [Cucumis sativus]) HSP 1 Score: 143.7 bits (361), Expect = 1.3e-30 Identity = 92/149 (61.74%), Postives = 105/149 (70.47%), Query Frame = 0
BLAST of Lcy05g005310 vs. NCBI nr
Match: XP_008451653.1 (PREDICTED: bZIP transcription factor 53-like [Cucumis melo] >KAA0046693.1 bZIP transcription factor 53-like [Cucumis melo var. makuwa] >TYK18229.1 bZIP transcription factor 53-like [Cucumis melo var. makuwa]) HSP 1 Score: 143.3 bits (360), Expect = 1.7e-30 Identity = 88/134 (65.67%), Postives = 99/134 (73.88%), Query Frame = 0
BLAST of Lcy05g005310 vs. NCBI nr
Match: KAB1210130.1 (Ocs element-binding factor 1 [Morella rubra]) HSP 1 Score: 141.0 bits (354), Expect = 8.4e-30 Identity = 79/137 (57.66%), Postives = 101/137 (73.72%), Query Frame = 0
BLAST of Lcy05g005310 vs. NCBI nr
Match: XP_018808498.1 (bZIP transcription factor 53 [Juglans regia]) HSP 1 Score: 135.6 bits (340), Expect = 3.5e-28 Identity = 76/137 (55.47%), Postives = 100/137 (72.99%), Query Frame = 0
BLAST of Lcy05g005310 vs. TAIR 10
Match: AT3G62420.1 (basic region/leucine zipper motif 53 ) HSP 1 Score: 104.0 bits (258), Expect = 1.1e-22 Identity = 61/127 (48.03%), Postives = 88/127 (69.29%), Query Frame = 0
BLAST of Lcy05g005310 vs. TAIR 10
Match: AT1G75390.1 (basic leucine-zipper 44 ) HSP 1 Score: 73.6 bits (179), Expect = 1.5e-13 Identity = 46/103 (44.66%), Postives = 71/103 (68.93%), Query Frame = 0
BLAST of Lcy05g005310 vs. TAIR 10
Match: AT4G34590.1 (G-box binding factor 6 ) HSP 1 Score: 69.3 bits (168), Expect = 2.9e-12 Identity = 41/99 (41.41%), Postives = 68/99 (68.69%), Query Frame = 0
BLAST of Lcy05g005310 vs. TAIR 10
Match: AT1G75390.2 (basic leucine-zipper 44 ) HSP 1 Score: 60.8 bits (146), Expect = 1.0e-09 Identity = 41/80 (51.25%), Postives = 55/80 (68.75%), Query Frame = 0
BLAST of Lcy05g005310 vs. TAIR 10
Match: AT2G18160.1 (basic leucine-zipper 2 ) HSP 1 Score: 60.5 bits (145), Expect = 1.3e-09 Identity = 42/107 (39.25%), Postives = 68/107 (63.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|