Lcy05g005250 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g005250
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	beta-carotene isomerase D27, chloroplastic
Location	Chr05: 4863756 .. 4866415 (+)
RNA-Seq Expression	Lcy05g005250
Synteny	Lcy05g005250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAAATTGAATATTGGTTCCAAAATCCCCAAAAAGTTGAGAGAAGTGAAAATGAAGCCACTGGCTCTTCTTCATCCTCCAGCCATCTCTTCTGCTCCTCTCCACTTCTCCTCCAAATCCCACCTTCAAAATCGTTACTTTAACTTCTCCTGTTCCGCTCTTCAATCTCAATCGGTAAGATTTCAATCTTCCCCTCGCCGTTTTGCAATTCAACCGACATGTAAATGCTTCAGCTCAATTCTGCTTCTCCATTTTCTTCATCGTGTTTGCATCCATAGATAAAGGGTGAAACATCTTCGAAGCCCGAGTACAAGCCTGGAATTCTCGACGATTTCTTCCTCAACCTCTTCCGAAGCAAAATGGTTCAGGTTGTTTAATTCGAGAGTTTTCTTTCATGGTATCACCAATTGGGTTTCTGAGAAAACAAATTTATGGAATTCATTGATTTGACTGCAGGAAGTGGGCTGGGATTCAGAAAAACCTGGATATGATGGACTAATTGAAGTCGCTAACAGGCTCACGATGAAGGGCAAAACCAATTCTGATACCATAGAAGCGTCGGTATTTCTATTTTAAGATAGATTTGTAGAGACAGAACAGAACATCTAATTCTCTTGTACTCTTTGAACATCCGAGTGTAATGGAAATTGTAATAGACTAGTTATGTTCGTAGATTACATTATGAAAAACTTGTGGTTATTGCTGCAGGTTCGAATTTTAACAGCTTTATTTCCTCCTCTTCTGTTGGAACTCTATCGAATGCTGGTATCACCTATTGCTGGTGGCAAAGTGGCTGCCATTATGGTCGGTGAGTTGTGCCTTCAATCTTTATCTGTATCTTTAATTAGGATCTTATTCCTTTTTTATTGGGGAATCAATTACTTTTCATTTGTTTGACTTTGATCTGTCTGGTGTGAGATTTTGAAGATTAGTTGAACTGTTCTGCCCCTTTTTTTTCTGTGTTCAAAGCAAGGGTGACTGCGCTGACTTGTCAATGGCTTATGGGAACTTGTACAGTAAATTCAATTGAATTACCTGATGGATCATCTTGTCAAAGTGGGGTATGAATTATTGATTACCATGTTTCGATGAAGTGGTGTTGCTTATATTTTGGATTTTTTAAATGTCAATCGATTAGTCAAAGCTTGTTTTTCATTTTTGTGGTCATTGATGCAGGTCTTCGTTGAAAAATGCAAGTACTTGGAAGAAAGCAAATGCATAGGAATTTGTATCAACACTTGCAAGTTTCCAACTCAGGTTTGTTCTTGCCAACCTATATATCAAGCTCTTTCTTTACATTACTGGTTAACTGGGAGCATCTTGTGATAGGAGTGCTATTAGAATAAAAATAGGAGTGTTATTGGGAGATTAAGGGTATGGTAGCAAATAGCTACAGAGTTTGTTATGAATAGAGTGGGTTAGAAAGGACGAAGGCAAGGATTGATTTGGTTGACTTAGGCTTGAGTGAGAGTGTTCAATAGAGGAGAGTCTAAATACCTCAGATTACTTAAGTTATCTTGTAGTTTCATTATATTTTATATTGCAATATGTATGGGTTCTATCATCTTGATTCCAGATACACTATTCATTTGACTTGACTCGAACCGATCTTGACAGTCTTGATTCTGATGTAGAGTTTCTTCAAGGAGCAGATGGGAATTCCTCTGTTAATGGAGCCAAACTTCAATGACTATAGTTGTCAAGTAATTCTATCACTTAGCTCAACATTTCTGTTCTACTATTGGATAACATTGTGGCTAGAATATATAACTCCTGTTACATGATGTTGTATCGATCTCCAAGAATCCTTTGACCCGGATTATTGTGATTTGATTGAAATGAAATTACTGAATATAGTGTGGATTCTCTTTTTAAGCTTAACAAACAATGCTACTGACATCTAGACTCTAGTTCTATGAAGATTTCATTAGAGATTCCCTATGAAATTGATTCAAATAAATCCATAATTAGTTTGGAAATGCTTTTGGGACTAGTGTATGGAACTTGCCGTGGCTGTCGCTGTCTGTAATTTTGATCAAATGGTGGTTGAACTTAACTGAGTTGGGAGTGAAATATACATAGCAGCTATAATCCACCTGTTTAATGATACCTATATCAGCGCCTTTCATGAGTCTAATCAACTTTAATTTCCTTTTTTCTTCCTTGTGGGGCAACTGAATTGACAGTTCAAATTTGGCGTTCTTCCTCCTCTGCCTGAAGAAGACAGCATACTCAGAGAGCCTTGCTTGGAGATATGTCCTAATGCCACAAGAAGAAGAGAAGTTTCAGCTAAGATGAGTTCAACGCAGTGTCCTAAAGCATAGATCGACCAGCCTTCGACGAGCTCGGAATCGTGTTGGATAATCTGGAACTTTGAATCGATTGCCTTCGACATCTCTGAATTTGCTTATACCAAAGATAGTTTGCCTTCTGATACAGCTGAGTTCTCACATAAGTCTCTTGATTGCACCAAGATTCTACTGGGCTGTGTTTATTCTTGTTGCATTTCGATGCATCCAAGGTTATGGAGTCAATAGTTACTGATGTAATCTGGAATTTTCATCTTTATATATGTAATGAAATATTATAACAAAATAGAAAACAAATTACATAGCTCATTTGAAATTATAAGTTTGAAGTCTTACTTCTGTCCTTGTTTG

mRNA sequence

CAGAAATTGAATATTGGTTCCAAAATCCCCAAAAAGTTGAGAGAAGTGAAAATGAAGCCACTGGCTCTTCTTCATCCTCCAGCCATCTCTTCTGCTCCTCTCCACTTCTCCTCCAAATCCCACCTTCAAAATCGTTACTTTAACTTCTCCTGTTCCGCTCTTCAATCTCAATCGATAAAGGGTGAAACATCTTCGAAGCCCGAGTACAAGCCTGGAATTCTCGACGATTTCTTCCTCAACCTCTTCCGAAGCAAAATGGTTCAGGAAGTGGGCTGGGATTCAGAAAAACCTGGATATGATGGACTAATTGAAGTCGCTAACAGGCTCACGATGAAGGGCAAAACCAATTCTGATACCATAGAAGCGTCGGTTCGAATTTTAACAGCTTTATTTCCTCCTCTTCTGTTGGAACTCTATCGAATGCTGGTATCACCTATTGCTGGTGGCAAAGTGGCTGCCATTATGGTCGCAAGGGTGACTGCGCTGACTTGTCAATGGCTTATGGGAACTTGTACAGTAAATTCAATTGAATTACCTGATGGATCATCTTGTCAAAGTGGGGTCTTCGTTGAAAAATGCAAGTACTTGGAAGAAAGCAAATGCATAGGAATTTGTATCAACACTTGCAAGTTTCCAACTCAGAGTTTCTTCAAGGAGCAGATGGGAATTCCTCTGTTAATGGAGCCAAACTTCAATGACTATAGTTGTCAATTCAAATTTGGCGTTCTTCCTCCTCTGCCTGAAGAAGACAGCATACTCAGAGAGCCTTGCTTGGAGATATGTCCTAATGCCACAAGAAGAAGAGAAGTTTCAGCTAAGATGAGTTCAACGCAGTGTCCTAAAGCATAGATCGACCAGCCTTCGACGAGCTCGGAATCGTGTTGGATAATCTGGAACTTTGAATCGATTGCCTTCGACATCTCTGAATTTGCTTATACCAAAGATAGTTTGCCTTCTGATACAGCTGAGTTCTCACATAAGTCTCTTGATTGCACCAAGATTCTACTGGGCTGTGTTTATTCTTGTTGCATTTCGATGCATCCAAGGTTATGGAGTCAATAGTTACTGATGTAATCTGGAATTTTCATCTTTATATATGTAATGAAATATTATAACAAAATAGAAAACAAATTACATAGCTCATTTGAAATTATAAGTTTGAAGTCTTACTTCTGTCCTTGTTTG

Coding sequence (CDS)

ATGAAGCCACTGGCTCTTCTTCATCCTCCAGCCATCTCTTCTGCTCCTCTCCACTTCTCCTCCAAATCCCACCTTCAAAATCGTTACTTTAACTTCTCCTGTTCCGCTCTTCAATCTCAATCGATAAAGGGTGAAACATCTTCGAAGCCCGAGTACAAGCCTGGAATTCTCGACGATTTCTTCCTCAACCTCTTCCGAAGCAAAATGGTTCAGGAAGTGGGCTGGGATTCAGAAAAACCTGGATATGATGGACTAATTGAAGTCGCTAACAGGCTCACGATGAAGGGCAAAACCAATTCTGATACCATAGAAGCGTCGGTTCGAATTTTAACAGCTTTATTTCCTCCTCTTCTGTTGGAACTCTATCGAATGCTGGTATCACCTATTGCTGGTGGCAAAGTGGCTGCCATTATGGTCGCAAGGGTGACTGCGCTGACTTGTCAATGGCTTATGGGAACTTGTACAGTAAATTCAATTGAATTACCTGATGGATCATCTTGTCAAAGTGGGGTCTTCGTTGAAAAATGCAAGTACTTGGAAGAAAGCAAATGCATAGGAATTTGTATCAACACTTGCAAGTTTCCAACTCAGAGTTTCTTCAAGGAGCAGATGGGAATTCCTCTGTTAATGGAGCCAAACTTCAATGACTATAGTTGTCAATTCAAATTTGGCGTTCTTCCTCCTCTGCCTGAAGAAGACAGCATACTCAGAGAGCCTTGCTTGGAGATATGTCCTAATGCCACAAGAAGAAGAGAAGTTTCAGCTAAGATGAGTTCAACGCAGTGTCCTAAAGCATAG

Protein sequence

MKPLALLHPPAISSAPLHFSSKSHLQNRYFNFSCSALQSQSIKGETSSKPEYKPGILDDFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKTNSDTIEASVRILTALFPPLLLELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLEESKCIGICINTCKFPTQSFFKEQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILREPCLEICPNATRRREVSAKMSSTQCPKA

Homology

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BLAST of Lcy05g005250 vs. ExPASy Swiss-Prot
Match: Q7XA78 (Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D27 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-27
Identity = 69/198 (34.85%), Postives = 112/198 (56.57%), Query Frame = 0


Query: 56  ILDDFFLNL---FRSKMVQE---VGWDSEKPGYDGLIEVANRLTMKGKTNSDTIEASVRI 115
           I D FF  +   + SK +Q+   +   S+   YD L++ A R++     N DT +    +
Sbjct: 65  IEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVS----RNFDTKQQHEFV 124

Query: 116 LTAL---FPPLLLELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSS 175
           L++L    P ++  L +M   P    KV+  + A  T ++  WL+G   V   E+ +G  
Sbjct: 125 LSSLDRALPTVISSLIKMAFPP---SKVSRELFALFTTISFAWLVGPSEVRETEV-NGRK 184

Query: 176 CQSGVFVEKCKYLEESKCIGICINTCKFPTQSFFKEQMGIPLLMEPNFNDYSCQFKFGVL 235
            +S V++EKC++LE+S C+G+C + CK P+Q F K  +G+P+ MEP+FND SC+  FG  
Sbjct: 185 EKSVVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGRE 244

Query: 236 PPLPEEDSILREPCLEIC 245
           PP  E+D  +++PC E C
Sbjct: 245 PPEIEDDPAMKQPCFEFC 254

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BLAST of Lcy05g005250 vs. ExPASy Swiss-Prot
Match: R4HZ96 (Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.3e-27
Identity = 76/231 (32.90%), Postives = 116/231 (50.22%), Query Frame = 0


Query: 36  ALQSQSIKGETSSKPE-YKPGILDDFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTM 95
           A  +  I  ET  K   YK    D   +N     +    G  + K G+D L+E A   + 
Sbjct: 36  ARPTDDISEETLRKTNVYKDNWFDKLAINHLSKSVQAATGISNNKSGFDSLVEAATVASQ 95

Query: 96  KGKTNSDTIEASVRILTAL---FPPLLLELYRMLVSPIAGGKVAAIMVARVTALTCQWLM 155
           K     +T +    IL AL   FP  +L + R ++ P    K+A    A  T +   WL+
Sbjct: 96  K----FNTTQQQGIILDALDRAFPKPILSVIRRVMPP---SKLAREYFAVFTTIFFAWLL 155

Query: 156 GTCTVNSIELPDGSSCQSGVFVEKCKYLEESKCIGICINTCKFPTQSFFKEQMGIPLLME 215
           G   V   E+ +G   ++ V ++KC++LEE+ C+G+CIN CK P+Q F K+  G+P+ M 
Sbjct: 156 GPSEVRESEI-NGRREKNIVHIKKCRFLEETNCVGMCINLCKMPSQLFIKDSFGMPVNMV 215

Query: 216 PNFNDYSCQFKFGVLPPLPEEDSILREPCLEICPNATRRREVSAKMSSTQC 263
           PNF+D SC+  FG  PP   +D  L++PC ++C         + K  +TQC
Sbjct: 216 PNFDDMSCEMIFGQEPPASTDDPALKQPCYKLCK--------AKKNHATQC 250

[Close]

BLAST of Lcy05g005250 vs. ExPASy Swiss-Prot
Match: C7AU21 (Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=D27 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.2e-23
Identity = 59/209 (28.23%), Postives = 107/209 (51.20%), Query Frame = 0


Query: 35  SALQSQSIKGETSSKPE---YKPGILDDFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANR 94
           +A    +++ ET++ P    Y+    D   +      + +  G  +EK GY+ LI+ A  
Sbjct: 60  TAAMMSTVQTETAAAPPATVYRDSWFDKLAIGYLSRNLQEASGLKNEKDGYESLIDAALA 119

Query: 95  LTMKGKTNSDTIEASVRILTALFPPLLLELYRMLVSPIAGGKVAAIMVARVTALTCQWLM 154
           ++     +  + E   + L    P  +L + ++++ P    + +    A  T +   WL+
Sbjct: 120 ISRIFSLDKQS-EIVTQALERALPSYILTMIKVMMPP---SRFSREYFAAFTTIFFPWLV 179

Query: 155 GTCTVNSIELPDGSSCQSGVFVEKCKYLEESKCIGICINTCKFPTQSFFKEQMGIPLLME 214
           G C V   E+ +G   ++ V++ KC++LE + C+G+C N CK P Q F ++ +G+ + M 
Sbjct: 180 GPCEVMESEV-EGRKEKNVVYIPKCRFLESTNCVGMCTNLCKIPCQKFIQDSLGMKVYMS 239

Query: 215 PNFNDYSCQFKFGVLPPLPEEDSILREPC 241
           PNF D SC+  FG  P  PE+D  L++PC
Sbjct: 240 PNFEDMSCEMIFGQQP--PEDDPALKQPC 261

[Close]

BLAST of Lcy05g005250 vs. ExPASy TrEMBL
Match: A0A6J1KWU1 (beta-carotene isomerase D27, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111497865 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 4.6e-133
Identity = 241/267 (90.26%), Postives = 252/267 (94.38%), Query Frame = 0


Query: 1   MKPLA-LLHPPA-ISSAPLHFSSKSHLQNRYFNFSCSALQSQSIKGETSSKPEYKPGILD 60
           MKP+A LLHPPA ISSA L FSSKSHL+ R  NFSC A+QS+S K E SSKP+YKPG+LD
Sbjct: 1   MKPVALLLHPPATISSAALRFSSKSHLRKRPLNFSCFAVQSESTKVEVSSKPDYKPGMLD 60

Query: 61  DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKTNSDTIEASVRILTALFPPLL 120
           DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGK+NSDTIEASVRIL ALFPPLL
Sbjct: 61  DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKSNSDTIEASVRILIALFPPLL 120

Query: 121 LELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           LELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKFPTQSFFKEQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILRE 240
           LEESKCIGIC+NTCKFPTQSFFK QMGIPLLMEPNFNDYSCQFKFGV PPLPEEDSIL+E
Sbjct: 181 LEESKCIGICLNTCKFPTQSFFKNQMGIPLLMEPNFNDYSCQFKFGVPPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSAKMSSTQCPKA 266
           PCLEICPNATRRREV +KMS+TQCPKA
Sbjct: 241 PCLEICPNATRRREVLSKMSATQCPKA 267

[Close]

BLAST of Lcy05g005250 vs. ExPASy TrEMBL
Match: A0A6J1H551 (beta-carotene isomerase D27, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111460668 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 3.0e-132
Identity = 240/267 (89.89%), Postives = 249/267 (93.26%), Query Frame = 0


Query: 1   MKPLA-LLHPPA-ISSAPLHFSSKSHLQNRYFNFSCSALQSQSIKGETSSKPEYKPGILD 60
           MKP+  LLHPPA ISSA L FSSKSHL+ R  N SC A+QS+S K E SSKPEYKPG+LD
Sbjct: 1   MKPVVLLLHPPATISSAALRFSSKSHLRKRPLNISCFAVQSESTKVEVSSKPEYKPGMLD 60

Query: 61  DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKTNSDTIEASVRILTALFPPLL 120
           DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGK+NSDTIEASVRIL ALFPPLL
Sbjct: 61  DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKSNSDTIEASVRILIALFPPLL 120

Query: 121 LELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           LELYRMLVSPIAGGKVAAIMVARVTA TCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LELYRMLVSPIAGGKVAAIMVARVTAFTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKFPTQSFFKEQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILRE 240
           LEESKCIGIC+NTCKFPTQSFFK QMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSIL+E
Sbjct: 181 LEESKCIGICLNTCKFPTQSFFKNQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSAKMSSTQCPKA 266
           PCLEICPNATRRREV  KMS+TQCPKA
Sbjct: 241 PCLEICPNATRRREVLNKMSATQCPKA 267

[Close]

BLAST of Lcy05g005250 vs. ExPASy TrEMBL
Match: A0A1S3BRJ4 (beta-carotene isomerase D27, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492751 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 5.1e-132
Identity = 241/267 (90.26%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 1   MKPLA-LLHPPAISSAPLHF-SSKSHLQNRYFNFSCSALQSQSIKGETSSKPEYKPGILD 60
           MKPLA LLHPP ISSAPL F SSKSHL+NR F  SCSALQS SIK  TSSK EYKPGILD
Sbjct: 1   MKPLALLLHPPTISSAPLRFNSSKSHLRNRPFILSCSALQSGSIKDGTSSKSEYKPGILD 60

Query: 61  DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKTNSDTIEASVRILTALFPPLL 120
           DFFLN+FRSKMVQEVGWDSEKPGY GLIEVA+RLTM G+TNS+TIEASVRILTALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYGGLIEVASRLTMTGRTNSETIEASVRILTALFPPLL 120

Query: 121 LELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           L+LYR+LVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKFPTQSFFKEQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILRE 240
           LEESKCIGICINTCK PTQSFFK+QMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSIL+E
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSAKMSSTQCPKA 266
           PCLEICPNATRRREVS KMS+ QCPKA
Sbjct: 241 PCLEICPNATRRREVSGKMSAAQCPKA 267

[Close]

BLAST of Lcy05g005250 vs. ExPASy TrEMBL
Match: A0A5D3D2R7 (Beta-carotene isomerase D27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001770 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 8.7e-132
Identity = 240/267 (89.89%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 1   MKPLA-LLHPPAISSAPLHF-SSKSHLQNRYFNFSCSALQSQSIKGETSSKPEYKPGILD 60
           MKP+A LLHPP ISSAPL F SSKSHL+NR F  SCSALQS SIK  TSSK EYKPGILD
Sbjct: 1   MKPMALLLHPPTISSAPLRFNSSKSHLRNRPFILSCSALQSGSIKDGTSSKSEYKPGILD 60

Query: 61  DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKTNSDTIEASVRILTALFPPLL 120
           DFFLN+FRSKMVQEVGWDSEKPGY GLIEVA+RLTM G+TNS+TIEASVRILTALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYGGLIEVASRLTMTGRTNSETIEASVRILTALFPPLL 120

Query: 121 LELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           L+LYR+LVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKFPTQSFFKEQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILRE 240
           LEESKCIGICINTCK PTQSFFK+QMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSIL+E
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSAKMSSTQCPKA 266
           PCLEICPNATRRREVS KMS+ QCPKA
Sbjct: 241 PCLEICPNATRRREVSGKMSAAQCPKA 267

[Close]

BLAST of Lcy05g005250 vs. ExPASy TrEMBL
Match: A0A0A0K9J2 (DUF4033 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G407750 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 8.1e-130
Identity = 237/267 (88.76%), Postives = 248/267 (92.88%), Query Frame = 0


Query: 1   MKPLA-LLHPPAISSAPLHF-SSKSHLQNRYFNFSCSALQSQSIKGETSSKPEYKPGILD 60
           MKP+A LLHPP IS APL F SSKSHL+NR F  SCSALQS SIK   SSK EYKPGILD
Sbjct: 1   MKPVALLLHPPTISPAPLRFTSSKSHLRNRPFILSCSALQSGSIKDGASSKAEYKPGILD 60

Query: 61  DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKTNSDTIEASVRILTALFPPLL 120
           DFFLN+FRSKMVQEVGWDSEKPGYDGLIEVA+RLTM GKTNS+TIEASVRIL ALFPPLL
Sbjct: 61  DFFLNVFRSKMVQEVGWDSEKPGYDGLIEVASRLTMTGKTNSETIEASVRILIALFPPLL 120

Query: 121 LELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           L+LYR+LVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LKLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKFPTQSFFKEQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILRE 240
           LEESKCIGICINTCK PTQSFFK+QMGIPLLMEPNF DYSCQFKFGVLPPLPEEDSIL+E
Sbjct: 181 LEESKCIGICINTCKLPTQSFFKDQMGIPLLMEPNFTDYSCQFKFGVLPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSAKMSSTQCPKA 266
           PCLEICPNATRRREVS K+S+ QCPKA
Sbjct: 241 PCLEICPNATRRREVSGKISAAQCPKA 267

[Close]

BLAST of Lcy05g005250 vs. NCBI nr
Match: XP_038898256.1 (beta-carotene isomerase D27, chloroplastic [Benincasa hispida])

HSP 1 Score: 490.0 bits (1260), Expect = 1.3e-134
Identity = 239/266 (89.85%), Postives = 252/266 (94.74%), Query Frame = 0


Query: 1   MKPLALLHPPAISSAPLHFS-SKSHLQNRYFNFSCSALQSQSIKGETSSKPEYKPGILDD 60
           MKPLALL PP ISSAPL F+ SKSHL+N   N SCSALQS+SIK ETSSKPEYKPG+LD+
Sbjct: 1   MKPLALLRPPTISSAPLRFTFSKSHLRNHPLNLSCSALQSESIKNETSSKPEYKPGLLDE 60

Query: 61  FFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKTNSDTIEASVRILTALFPPLLL 120
           FFLN+FRSKMVQEVGWDSEKPGYDGLIEVANRLT KGKTNSDTIEASVRILTALFPPLLL
Sbjct: 61  FFLNVFRSKMVQEVGWDSEKPGYDGLIEVANRLTTKGKTNSDTIEASVRILTALFPPLLL 120

Query: 121 ELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYL 180
           +LYR+LVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNS ELPDGSSCQSGVFVEKCKYL
Sbjct: 121 DLYRILVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSFELPDGSSCQSGVFVEKCKYL 180

Query: 181 EESKCIGICINTCKFPTQSFFKEQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILREP 240
           EESKCIGICINTCK PTQSFFK++MGIPLLMEPNFNDYSCQFKFGVLPPLPEED IL+EP
Sbjct: 181 EESKCIGICINTCKLPTQSFFKDRMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDGILKEP 240

Query: 241 CLEICPNATRRREVSAKMSSTQCPKA 266
           CLEICPNATRRRE+S KMS+TQCPKA
Sbjct: 241 CLEICPNATRRREISGKMSATQCPKA 266

[Close]

BLAST of Lcy05g005250 vs. NCBI nr
Match: XP_023004624.1 (beta-carotene isomerase D27, chloroplastic [Cucurbita maxima])

HSP 1 Score: 483.8 bits (1244), Expect = 9.5e-133
Identity = 241/267 (90.26%), Postives = 252/267 (94.38%), Query Frame = 0


Query: 1   MKPLA-LLHPPA-ISSAPLHFSSKSHLQNRYFNFSCSALQSQSIKGETSSKPEYKPGILD 60
           MKP+A LLHPPA ISSA L FSSKSHL+ R  NFSC A+QS+S K E SSKP+YKPG+LD
Sbjct: 1   MKPVALLLHPPATISSAALRFSSKSHLRKRPLNFSCFAVQSESTKVEVSSKPDYKPGMLD 60

Query: 61  DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKTNSDTIEASVRILTALFPPLL 120
           DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGK+NSDTIEASVRIL ALFPPLL
Sbjct: 61  DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKSNSDTIEASVRILIALFPPLL 120

Query: 121 LELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           LELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKFPTQSFFKEQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILRE 240
           LEESKCIGIC+NTCKFPTQSFFK QMGIPLLMEPNFNDYSCQFKFGV PPLPEEDSIL+E
Sbjct: 181 LEESKCIGICLNTCKFPTQSFFKNQMGIPLLMEPNFNDYSCQFKFGVPPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSAKMSSTQCPKA 266
           PCLEICPNATRRREV +KMS+TQCPKA
Sbjct: 241 PCLEICPNATRRREVLSKMSATQCPKA 267

[Close]

BLAST of Lcy05g005250 vs. NCBI nr
Match: KAG6593243.1 (Beta-carotene isomerase D27, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 483.4 bits (1243), Expect = 1.2e-132
Identity = 241/267 (90.26%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 1   MKPLA-LLHPPA-ISSAPLHFSSKSHLQNRYFNFSCSALQSQSIKGETSSKPEYKPGILD 60
           MKP+A LLHPPA I SA L FSSKSHL+NR  +FSC A+QS+S K E SSKPEYKPG+LD
Sbjct: 1   MKPVALLLHPPATIPSAALRFSSKSHLRNRPLSFSCFAVQSESTKVEVSSKPEYKPGMLD 60

Query: 61  DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKTNSDTIEASVRILTALFPPLL 120
           DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGK+NSDTIEASVRIL ALFPPLL
Sbjct: 61  DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKSNSDTIEASVRILIALFPPLL 120

Query: 121 LELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           LELYRMLVSPIAGGKVAAIMVARVTA TCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LELYRMLVSPIAGGKVAAIMVARVTAFTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKFPTQSFFKEQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILRE 240
           LEESKCIGIC+NTCKFPTQSFFK QMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSIL+E
Sbjct: 181 LEESKCIGICLNTCKFPTQSFFKNQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSAKMSSTQCPKA 266
           PCLEICPNATRRREV  KMS+TQCPKA
Sbjct: 241 PCLEICPNATRRREVLNKMSATQCPKA 267

[Close]

BLAST of Lcy05g005250 vs. NCBI nr
Match: XP_023514967.1 (beta-carotene isomerase D27, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 481.9 bits (1239), Expect = 3.6e-132
Identity = 240/267 (89.89%), Postives = 251/267 (94.01%), Query Frame = 0


Query: 1   MKPLA-LLHPPA-ISSAPLHFSSKSHLQNRYFNFSCSALQSQSIKGETSSKPEYKPGILD 60
           MKP+A LLHPPA ISSA L FSSKSHL+ R  N SC A+QS+S K E SSKPEYKPG+LD
Sbjct: 1   MKPVALLLHPPATISSAALRFSSKSHLRKRPLNISCFAVQSESTKVEVSSKPEYKPGMLD 60

Query: 61  DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKTNSDTIEASVRILTALFPPLL 120
           DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGK+NSDTIEASVRIL ALFPPLL
Sbjct: 61  DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKSNSDTIEASVRILIALFPPLL 120

Query: 121 LELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           LELYRMLVSPIAGGKVAAIMVARVTA TCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LELYRMLVSPIAGGKVAAIMVARVTAFTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKFPTQSFFKEQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILRE 240
           LEESKCIGIC+NTCKFPTQSFFK QMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSIL+E
Sbjct: 181 LEESKCIGICLNTCKFPTQSFFKNQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSAKMSSTQCPKA 266
           PCLEICP+ATRRREV +KMS+TQCPKA
Sbjct: 241 PCLEICPHATRRREVLSKMSATQCPKA 267

[Close]

BLAST of Lcy05g005250 vs. NCBI nr
Match: XP_022959652.1 (beta-carotene isomerase D27, chloroplastic [Cucurbita moschata])

HSP 1 Score: 481.1 bits (1237), Expect = 6.2e-132
Identity = 240/267 (89.89%), Postives = 249/267 (93.26%), Query Frame = 0


Query: 1   MKPLA-LLHPPA-ISSAPLHFSSKSHLQNRYFNFSCSALQSQSIKGETSSKPEYKPGILD 60
           MKP+  LLHPPA ISSA L FSSKSHL+ R  N SC A+QS+S K E SSKPEYKPG+LD
Sbjct: 1   MKPVVLLLHPPATISSAALRFSSKSHLRKRPLNISCFAVQSESTKVEVSSKPEYKPGMLD 60

Query: 61  DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKTNSDTIEASVRILTALFPPLL 120
           DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGK+NSDTIEASVRIL ALFPPLL
Sbjct: 61  DFFLNLFRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKSNSDTIEASVRILIALFPPLL 120

Query: 121 LELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180
           LELYRMLVSPIAGGKVAAIMVARVTA TCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY
Sbjct: 121 LELYRMLVSPIAGGKVAAIMVARVTAFTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKY 180

Query: 181 LEESKCIGICINTCKFPTQSFFKEQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILRE 240
           LEESKCIGIC+NTCKFPTQSFFK QMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSIL+E
Sbjct: 181 LEESKCIGICLNTCKFPTQSFFKNQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILKE 240

Query: 241 PCLEICPNATRRREVSAKMSSTQCPKA 266
           PCLEICPNATRRREV  KMS+TQCPKA
Sbjct: 241 PCLEICPNATRRREVLNKMSATQCPKA 267

[Close]

BLAST of Lcy05g005250 vs. TAIR 10
Match: AT4G01995.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 302.8 bits (774), Expect = 2.8e-82
Identity = 155/261 (59.39%), Postives = 189/261 (72.41%), Query Frame = 0


Query: 6   LLHPPAISSAPLHFSSKSHLQNRYFNFSCSALQSQSIKG-ETSSKPEYKPGILDDFFLNL 65
           LL PP        FS+K  L  R     C    S  +K  E + K EYKPG LDDFF+  
Sbjct: 8   LLPPPTTIVFSNSFSTKLILTRR---LRCRISNSSEVKSDEGAPKLEYKPGPLDDFFMQS 67

Query: 66  FRSKMVQEVGWDSEKPGYDGLIEVANRLTMKGKTNSDTIEASVRILTALFPPLLLELYRM 125
           FR+K+V+EVG DSEKPGY GLIE+   L +KG+T S+T +A+VRIL +LFPPL+LELY++
Sbjct: 68  FRNKLVEEVGSDSEKPGYVGLIELVKLLLLKGRTRSETSDAAVRILKSLFPPLILELYKL 127

Query: 126 LVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSSCQSGVFVEKCKYLEESKC 185
           L++PIA GK+AA+MVARVT LTCQWLMG   VN I+LP+G S  SGVFVEKC+YLEESKC
Sbjct: 128 LIAPIAQGKLAALMVARVTVLTCQWLMGPSKVNIIDLPNGESWDSGVFVEKCQYLEESKC 187

Query: 186 IGICINTCKFPTQSFFKEQMGIPLLMEPNFNDYSCQFKFGVLPPLPEEDSILREPCLEIC 245
           +G+CINTCK PTQ+FFK+ MG+PL+MEPNF DYSCQFKFGV P  PE+D  + EPC E C
Sbjct: 188 VGVCINTCKLPTQTFFKDYMGVPLVMEPNFKDYSCQFKFGVAP--PEDDGNVNEPCFETC 247

Query: 246 PNATRRREVSAKMSSTQCPKA 266
             A RR     K+ S +CP A
Sbjct: 248 SIAGRR-----KLKSGECPLA 258

[Close]

BLAST of Lcy05g005250 vs. TAIR 10
Match: AT1G64680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-31
Identity = 82/228 (35.96%), Postives = 122/228 (53.51%), Query Frame = 0


Query: 49  KPEYKPGILDDFFLNLFRSKM----------VQEVG-WDSEKPGYDGLIEVANRLTMKGK 108
           K  Y+ G+++  F+ LF  KM           +E G W+ +   Y+  +EV+ R+ M+G+
Sbjct: 36  KTRYEDGLVERVFMGLFARKMDKFGSKKKKDTKEKGFWEYD---YESFVEVSKRV-MQGR 95

Query: 109 TNSDTIEASVRILTALFPPLLLELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVN 168
           +     EA   +L ++ PP   E +R L  P    K AA   A +T     WL+G   V 
Sbjct: 96  SRVQQQEAVREVLLSMLPPGAPEQFRKLFPPT---KWAAEFNAALTVPFFHWLVGPSQVI 155

Query: 169 SIELPDGSSCQSGVFVEKCKYLEESKCIGICINTCKFPTQSFFKEQMGIPLLMEPNFNDY 228
            +E+ +G   +SGV ++KC+YLE S C+G+C+N CK PTQ FF  + G+PL M PN+ D 
Sbjct: 156 EVEV-NGVKQRSGVRIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGLPLTMNPNYEDM 215

Query: 229 SCQFKFGVLPPLPEEDSILREPCL-EICPNATRRREVSAKMSSTQCPK 265
           SC+  +G  PP  EED   ++PCL +IC          +  SS  CPK
Sbjct: 216 SCEMIYGQAPPAFEEDVATKQPCLADICS--------MSNPSSPICPK 247

[Close]

BLAST of Lcy05g005250 vs. TAIR 10
Match: AT1G03055.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 143 Blast hits to 143 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-28
Identity = 69/198 (34.85%), Postives = 112/198 (56.57%), Query Frame = 0


Query: 56  ILDDFFLNL---FRSKMVQE---VGWDSEKPGYDGLIEVANRLTMKGKTNSDTIEASVRI 115
           I D FF  +   + SK +Q+   +   S+   YD L++ A R++     N DT +    +
Sbjct: 65  IEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVS----RNFDTKQQHEFV 124

Query: 116 LTAL---FPPLLLELYRMLVSPIAGGKVAAIMVARVTALTCQWLMGTCTVNSIELPDGSS 175
           L++L    P ++  L +M   P    KV+  + A  T ++  WL+G   V   E+ +G  
Sbjct: 125 LSSLDRALPTVISSLIKMAFPP---SKVSRELFALFTTISFAWLVGPSEVRETEV-NGRK 184

Query: 176 CQSGVFVEKCKYLEESKCIGICINTCKFPTQSFFKEQMGIPLLMEPNFNDYSCQFKFGVL 235
            +S V++EKC++LE+S C+G+C + CK P+Q F K  +G+P+ MEP+FND SC+  FG  
Sbjct: 185 EKSVVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGRE 244

Query: 236 PPLPEEDSILREPCLEIC 245
           PP  E+D  +++PC E C
Sbjct: 245 PPEIEDDPAMKQPCFEFC 254

The following BLAST results are available for this feature:

BLAST of Lcy05g005250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XA78	1.5e-27	34.85	Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D2...	[more]
R4HZ96	7.3e-27	32.90	Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27...	[more]
C7AU21	2.2e-23	28.23	Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of Lcy05g005250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KWU1	4.6e-133	90.26	beta-carotene isomerase D27, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1H551	3.0e-132	89.89	beta-carotene isomerase D27, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A1S3BRJ4	5.1e-132	90.26	beta-carotene isomerase D27, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034927...	[more]
A0A5D3D2R7	8.7e-132	89.89	Beta-carotene isomerase D27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A0A0K9J2	8.1e-130	88.76	DUF4033 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G407750 PE=...	[more]

BLAST of Lcy05g005250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898256.1	1.3e-134	89.85	beta-carotene isomerase D27, chloroplastic [Benincasa hispida]	[more]
XP_023004624.1	9.5e-133	90.26	beta-carotene isomerase D27, chloroplastic [Cucurbita maxima]	[more]
KAG6593243.1	1.2e-132	90.26	Beta-carotene isomerase D27, chloroplastic, partial [Cucurbita argyrosperma subs...	[more]
XP_023514967.1	3.6e-132	89.89	beta-carotene isomerase D27, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022959652.1	6.2e-132	89.89	beta-carotene isomerase D27, chloroplastic [Cucurbita moschata]	[more]

BLAST of Lcy05g005250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01995.1	2.8e-82	59.39	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G64680.1	1.3e-31	35.96	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G03055.1	1.0e-28	34.85	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025114	Beta-carotene isomerase D27-like, C-terminal	PFAM	PF13225	DUF4033	coord: 149..231 e-value: 5.0E-34 score: 116.1
IPR038938	Beta-carotene isomerase D27-like	PANTHER	PTHR33591	BETA-CAROTENE ISOMERASE D27	coord: 22..265
None	No IPR available	PANTHER	PTHR33591:SF2	BETA-CAROTENE ISOMERASE D27	coord: 22..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g005250.1	Lcy05g005250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016853	isomerase activity