Lcy05g003880 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g003880
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RING-type E3 ubiquitin transferase
Location	Chr05: 3475556 .. 3478875 (+)
RNA-Seq Expression	Lcy05g003880
Synteny	Lcy05g003880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAAAGTCATTGTCACGTGACGTTTCTGTCGTCTTCTTAACAAAAGAATTGACAAAACAAATTGTTTTGAAACAAGACTTAAAATTTTAAGAAAGAAAATAAATCTTTTAAAAGTTCAAGTGCATATTTGAAATCTAATCTAAAAATGATCGAGACTTTATAGTTTAACCTATGATGGCTCATTTTTATAATTTATTTTTTTAGTCATGAATTACCAATAAAAGTCTTCTCTTCCCTTGACAAGAAAAGGGGAAGAAAAAGAAAACATTCGGACTAAACGAAAAAGATAAAGAGAAAAATGACTTTGGTAAAAGAAAATCCCAAGTCTTCTCTTAAATAAATAAATAAAAGTGAAAAAGTAAAAAAATGTGTCGCTTGAGAGATTCGAACTCCCGCGGGGTAACCCTTTTTCTCCCGAAAATTCACTCAACGGGAAACCCCATGTGCACTGATAGCACACGCCTTAACCACTCGGCCAAAGCGACAGAATTTGTTAAGTAAATTCTCTAAATTAAATATAAAAACTAAATACTTAAAACTGCCCGAAAGCTACAACCCACCAAATAAAGCAAAGGGAATGGCGGAAGGACCCACCCGGGCAGCCCTGCCACTAACCAACTGCGCTAAAACTCAATTTCAAAACTACACCCAAAAATCCAAAATTTCTTATCTTTACCCAATTTTGAGGGGCGAGATCGATCGAAATCCCAAAAATCATCGGTTCCTCACCTCCGGTGTGGTTAAAAACCATGTCCTCCGCCACCGCCGCAGCCACCACTGCCGCCGAACGCCACACCTACTGGTGCCACGAGTGCGATATGAGCGTCACTTTGGTTTCCCCTTCTTCTTCTTCCTCTTCATCTTCTTCTTCTTCTTCCTCTCTCCTTTGTCCTCACTGCCTCACTGACTTCCTCGAACACATGGATTTCACCATCCCCACTTCCTCTTCTTCAATTTCCGACCACCCCATTTCCTCTTCTTCCCCTCCAGATTCCGATCCCTCTTCCTTCGTCGTCGTCGACCCTCTTCCGCCGGCCTCCGATGACAATTACCTCCTCAGTAGCCCCCAATTCCTCCGCCTCTTCCAGCAGCTCGCCGATTCATCCGATTCCGATTTCGCCCCATCTGTGCCCTTCAACCCCTTTACTCCGATCAAGGCCTCTGTCATGGCGATTCCCACCATTAAAGTCTCCTCCTCCATGCTCGAGGAAGACCCAGTTCTAATTTGTGCTATTTGCAAGGATCAGTTCCTTCTTGAGGTTGAAGCCAAACAGCTCCCCTGTTCTCATCTTTACCATCCGGATTGTATTCTTCCTTGGCTTTCTAATCATGATTCTTGCCCGCTTTGCCGCTTTAAGCTTCCTTCTGATGACCCTTCTGATCATGTCAGATGTAGAGGGGCGACTATGGCCTTGCTGAGGGCTAGGGATTTGATGCATCAGGAGGATAGTTATGGGTTGAGGACTACTCTGCGGCATATTGCTAGAAGGCATAGTTCTATTTTTAGTGAGGGAATTCAAGTGGATTCTTCTCAATCTCCCACTCAGCTGGGGGTTGCTGAGATGGGGAGTGGGGAACAGACTGACAGTGGTGAGACTGTTTCTAGTGTGGCTACCGATGATGGGATCGTGATTGTCAGTAGCAGTGGCGATGAGAATGGATTTGTGGGAATGGATGGTGGATCTATAAATGAGGATGCTGGCACTGTAGTTTAGGATATTGGAGTTTCTCCTTCGAGTTTTGTTTCTGCCAATTTGAGGTTTGTGTTCTCCCTTTTAACTGCTGTTCTTTGTTCGTTTGCCGTGTTCTTGTAGTTTGTATTGATGAGAGGGATTTCTATATTGAGCTTGGAATGAAAGAGTTTATATTTGATATAAATTGACAACAGATAGAGTGGCTTGTGATACACTGACACTTTAAACCTCTAGGCTAGGAGTTCAGTGTAGTATGGACTTGCCAATTACTGATTTGAGTTCAGTGAAACTCATTGATTGGCATCTTTGATTGTCTTTTCAGGATTCAGTGTAGTATGGACTTGCCAATTACTGATTAAAGTTTGAAGCATGATCCAAGCTTTCTGTTCTTAGTTCCTATTGATGGCACTTCGATTAGTTTTTTGGTGATAATGGGAAAAGACTGCAAATCTGAAACAATTCAGCAAAGTCTGTGGTAAACATTTCAAGAATTCTGAGAAATCTAGGTTTGAACTCCAATAGAAAAGTTAGCCTCGAGTTAGATTAGATCGACCACTTTTTAGTCCCTTCTTTAAACCTGATCTTATCATCCTGTTGATGACTTCCTACTGTCTCTTTTCTTTTCTAGTCAAGTATTTTGTTTCCAGAATGAAAAGATTTAATGATCAATAGGTTCTCTGAGCTGGATGAATAATCTGGAAATATGAAACTTAGCTACATAAAAATACAATACCTTTATTATTCATTCAGCATCAACTTTATATAATATTTTTTGTTCTGAACTATATACCATCACGAATGGTTGGTGCATGTGTATGATTCTCATGACAAATTTGAATTCCTATGCTTACTGCCTTCTTTATATTTGATGATCATAGGTTTATCACTTATGTGTGCTATCATAGCATGTTTCCGGCTATCTTAAGTATAGTTATTTTGGCTCTAGACTAATCTGTCTAGATAACCTTTGTGTTCAAAACTTAGTCTTGAGTAAACTGTATACTGGTTAATACATCTCCAAATCATACCTAAAAGATCAAAGTTTTGTTTTTCTTTTTTGAAAAGGAAGACTCTTTCTTGAATTGCATAATGTCATTCATGTTATTATGCAACTACTGAGCTCCTGTGAACCACAAGATTGAGATTTCTACTTCTACTTTCTTTGTAACCACCTTAATTATGACGAGCTTACCTGAACAAGATCTATTCTATAGGTCGTATTTCTCTGTCCTTGAGTTCTAAAAAACCACCTTAAATAAGAAAGAAACCCCATCATCCAAGGCATTTGTAATGAGCTGGATAGTTTCAATGATGTATATTTAAGCAACTTATAGCATGCTAGTAAAATCACTTTGCTGCAGAGTAATGTTTAATCATTTTACTTGTGTTGGACGAATCTTAATGTTTACATGTTTCCATAAAGCTAAAGTTTCTTTGTCAAGCTTTCTTCTATGTACTTATTTGTACTGTCATTTATTTGTTACTGCAGGTAATATAGTAGAATATGCTTTTTAGAGGAATCTTAGAAAGCTACCCCAACTAGATGATTGATTGGAAGTGTAAATTGCTACAGAGAAAGACTCTGCTACCTTCTTCTTCTTCCTCCTCTTTTTTTTTTTTTTTTT

mRNA sequence

TTAAAAGTCATTGTCACGTGACGTTTCTGTCGTCTTCTTAACAAAAGAATTGACAAAACAAATTGTTTTGAAACAAGACTTAAAATTTTAAGAAAGAAAATAAATCTTTTAAAAGTTCAAGTGCATATTTGAAATCTAATCTAAAAATGATCGAGACTTTATAGTTTAACCTATGATGGCTCATTTTTATAATTTATTTTTTTAGTCATGAATTACCAATAAAAGTCTTCTCTTCCCTTGACAAGAAAAGGGGAAGAAAAAGAAAACATTCGGACTAAACGAAAAAGATAAAGAGAAAAATGACTTTGGTAAAAGAAAATCCCAAGTCTTCTCTTAAATAAATAAATAAAAGTGAAAAAGTAAAAAAATGTGTCGCTTGAGAGATTCGAACTCCCGCGGGGTAACCCTTTTTCTCCCGAAAATTCACTCAACGGGAAACCCCATGTGCACTGATAGCACACGCCTTAACCACTCGGCCAAAGCGACAGAATTTGTTAAGTAAATTCTCTAAATTAAATATAAAAACTAAATACTTAAAACTGCCCGAAAGCTACAACCCACCAAATAAAGCAAAGGGAATGGCGGAAGGACCCACCCGGGCAGCCCTGCCACTAACCAACTGCGCTAAAACTCAATTTCAAAACTACACCCAAAAATCCAAAATTTCTTATCTTTACCCAATTTTGAGGGGCGAGATCGATCGAAATCCCAAAAATCATCGGTTCCTCACCTCCGGTGTGGTTAAAAACCATGTCCTCCGCCACCGCCGCAGCCACCACTGCCGCCGAACGCCACACCTACTGGTGCCACGAGTGCGATATGAGCGTCACTTTGGTTTCCCCTTCTTCTTCTTCCTCTTCATCTTCTTCTTCTTCTTCCTCTCTCCTTTGTCCTCACTGCCTCACTGACTTCCTCGAACACATGGATTTCACCATCCCCACTTCCTCTTCTTCAATTTCCGACCACCCCATTTCCTCTTCTTCCCCTCCAGATTCCGATCCCTCTTCCTTCGTCGTCGTCGACCCTCTTCCGCCGGCCTCCGATGACAATTACCTCCTCAGTAGCCCCCAATTCCTCCGCCTCTTCCAGCAGCTCGCCGATTCATCCGATTCCGATTTCGCCCCATCTGTGCCCTTCAACCCCTTTACTCCGATCAAGGCCTCTGTCATGGCGATTCCCACCATTAAAGTCTCCTCCTCCATGCTCGAGGAAGACCCAGTTCTAATTTGTGCTATTTGCAAGGATCAGTTCCTTCTTGAGGTTGAAGCCAAACAGCTCCCCTGTTCTCATCTTTACCATCCGGATTGTATTCTTCCTTGGCTTTCTAATCATGATTCTTGCCCGCTTTGCCGCTTTAAGCTTCCTTCTGATGACCCTTCTGATCATGTCAGATGTAGAGGGGCGACTATGGCCTTGCTGAGGGCTAGGGATTTGATGCATCAGGAGGATAGTTATGGGTTGAGGACTACTCTGCGGCATATTGCTAGAAGGCATAGTTCTATTTTTAGTGAGGGAATTCAAGTGGATTCTTCTCAATCTCCCACTCAGCTGGGGGTTGCTGAGATGGGGAGTGGGGAACAGACTGACAGTGGTGAGACTGTTTCTAGTGTGGCTACCGATGATGGGATCGTGATTGTCAGTAGCAGTGGCGATGAGAATGGATTTGTGGGAATGGATGGTGGATCTATAAATGAGGATGCTGGCACTGTAGTTTAGGATATTGGAGTTTCTCCTTCGAGTTTTGTTTCTGCCAATTTGAGGATTCAGTGTAGTATGGACTTGCCAATTACTGATTAAAGTTTGAAGCATGATCCAAGCTTTCTGTTCTTAGTTCCTATTGATGGCACTTCGATTAGTTTTTTGGTGATAATGGGAAAAGACTGCAAATCTGAAACAATTCAGCAAAGTCTGTGGTAATATAGTAGAATATGCTTTTTAGAGGAATCTTAGAAAGCTACCCCAACTAGATGATTGATTGGAAGTGTAAATTGCTACAGAGAAAGACTCTGCTACCTTCTTCTTCTTCCTCCTCTTTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGTCCTCCGCCACCGCCGCAGCCACCACTGCCGCCGAACGCCACACCTACTGGTGCCACGAGTGCGATATGAGCGTCACTTTGGTTTCCCCTTCTTCTTCTTCCTCTTCATCTTCTTCTTCTTCTTCCTCTCTCCTTTGTCCTCACTGCCTCACTGACTTCCTCGAACACATGGATTTCACCATCCCCACTTCCTCTTCTTCAATTTCCGACCACCCCATTTCCTCTTCTTCCCCTCCAGATTCCGATCCCTCTTCCTTCGTCGTCGTCGACCCTCTTCCGCCGGCCTCCGATGACAATTACCTCCTCAGTAGCCCCCAATTCCTCCGCCTCTTCCAGCAGCTCGCCGATTCATCCGATTCCGATTTCGCCCCATCTGTGCCCTTCAACCCCTTTACTCCGATCAAGGCCTCTGTCATGGCGATTCCCACCATTAAAGTCTCCTCCTCCATGCTCGAGGAAGACCCAGTTCTAATTTGTGCTATTTGCAAGGATCAGTTCCTTCTTGAGGTTGAAGCCAAACAGCTCCCCTGTTCTCATCTTTACCATCCGGATTGTATTCTTCCTTGGCTTTCTAATCATGATTCTTGCCCGCTTTGCCGCTTTAAGCTTCCTTCTGATGACCCTTCTGATCATGTCAGATGTAGAGGGGCGACTATGGCCTTGCTGAGGGCTAGGGATTTGATGCATCAGGAGGATAGTTATGGGTTGAGGACTACTCTGCGGCATATTGCTAGAAGGCATAGTTCTATTTTTAGTGAGGGAATTCAAGTGGATTCTTCTCAATCTCCCACTCAGCTGGGGGTTGCTGAGATGGGGAGTGGGGAACAGACTGACAGTGGTGAGACTGTTTCTAGTGTGGCTACCGATGATGGGATCGTGATTGTCAGTAGCAGTGGCGATGAGAATGGATTTGTGGGAATGGATGGTGGATCTATAAATGAGGATGCTGGCACTGTAGTTTAG

Protein sequence

MSSATAAATTAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSLLCPHCLTDFLEHMDFTIPTSSSSISDHPISSSSPPDSDPSSFVVVDPLPPASDDNYLLSSPQFLRLFQQLADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSSMLEEDPVLICAICKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDHVRCRGATMALLRARDLMHQEDSYGLRTTLRHIARRHSSIFSEGIQVDSSQSPTQLGVAEMGSGEQTDSGETVSSVATDDGIVIVSSSGDENGFVGMDGGSINEDAGTVV

Homology

[Close]

BLAST of Lcy05g003880 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.7e-17
Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 0


Query: 106 PQFLRLFQQLADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSSMLEEDPVLICAICKD 165
           P    L +QL+  +     P  P       K+S+ A+PTIK++   L+      C +CKD
Sbjct: 140 PGLEELIEQLSSGTHHRGPPPAP-------KSSIDALPTIKITQKHLKSSD-SHCPVCKD 199

Query: 166 QFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPS 207
           +F L+ EAKQ+PC H+YH DCI+PWL  H+SCP+CR +LPS
Sbjct: 200 EFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS 232

[Close]

BLAST of Lcy05g003880 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.3e-17
Identity = 43/101 (42.57%), Postives = 62/101 (61.39%), Query Frame = 0


Query: 106 PQFLRLFQQLADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSSMLEEDPVLICAICKD 165
           P    LF+QL+  +     P  P       ++++ A+PTIK++   L       C +CKD
Sbjct: 144 PGLEELFEQLSAGTTRRGPPPAP-------RSAIDALPTIKIAQRHLRSSD-SNCPVCKD 203

Query: 166 QFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPS 207
           +F L  EAKQ+PC+H+YH DCI+PWL  H+SCP+CR +LPS
Sbjct: 204 EFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 236

[Close]

BLAST of Lcy05g003880 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.3e-17
Identity = 83/281 (29.54%), Postives = 129/281 (45.91%), Query Frame = 0


Query: 2   SSATAAATTAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSLLCPHCLTDFLEHMDFT 61
           S+ +AAA    ++  ++C++C+ +VT+         S SSS+   CP C   FLE  ++ 
Sbjct: 7   STGSAAAAPEVDK-MFFCYQCNQTVTI---------SISSSADPFCPICNQGFLE--EYE 66

Query: 62  IPTSSSSISDHPISSSS-PPDSDPSSFVV-----VDPLPPASDDNYLLSSPQ-------- 121
            P  + S++ +P SS S  P +DP S ++          P+  D   L  P         
Sbjct: 67  DPNPNQSLNFNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARST 126

Query: 122 -------------FLRLFQQLADSSDSDFA------PSVPFNPF---------------- 181
                        FL+   Q   SS + F       PS P N                  
Sbjct: 127 QQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQL 186

Query: 182 -------------TP--IKASVMAIPTIKVSSSMLEEDPVLICAICKDQFLLEVEAKQLP 219
                        TP   K+++ A+PT+KV+  ML+ + +  CA+C D+F    + KQ+P
Sbjct: 187 IQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSE-MNQCAVCMDEFEDGSDVKQMP 246

[Close]

BLAST of Lcy05g003880 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.4e-16
Identity = 72/217 (33.18%), Postives = 107/217 (49.31%), Query Frame = 0


Query: 28  LVSPSSSSSSSSSSSSSLLCPHCLTDFLEHMDFTIPTSSSSISDHPISSSSPPDS-DPSS 87
           L+ PSSSS+++SSS+S                  I  ++ S+S    S    P + DP +
Sbjct: 94  LLFPSSSSTTTSSSAS------------------IDPNNPSLSGPTRSGRGDPFAFDPFT 153

Query: 88  FV----------------VVDPLP-------PASDDNYLLSSPQFLRLFQQLADSSDSDF 147
           F+                V+   P       PA+  +Y +  P   +L QQLA++  + +
Sbjct: 154 FIQNHLNDLRSSGAQIEFVIQNNPSDQGFRLPANIGDYFI-GPGLEQLIQQLAENDPNRY 213

Query: 148 APSVPFNPFTP--IKASVMAIPTIKVSSSMLEEDPVLICAICKDQFLLEVEAKQLPCSHL 207
                    TP   K+++ A+P + ++ S L  +    CA+C D F    EAKQ+PC HL
Sbjct: 214 G--------TPPASKSAIEALPLVNITKSNLNSE-FNQCAVCMDDFEEGTEAKQMPCKHL 273

Query: 208 YHPDCILPWLSNHDSCPLCRFKLPSDDPSDHVRCRGA 219
           YH DC+LPWL  H+SCP+CR +LP+DDP    R RGA
Sbjct: 274 YHKDCLLPWLELHNSCPVCRHELPTDDPDYERRVRGA 282

[Close]

BLAST of Lcy05g003880 vs. ExPASy Swiss-Prot
Match: Q9SPL2 (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana OX=3702 GN=CIP8 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.0e-16
Identity = 36/73 (49.32%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 136 KASVMAIPTIKVSSSMLEEDPVLICAICKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHD 195
           K+++ A+ T +VSSS  E + V++CA+CKD  ++    K+LPC H YH DCI+PWL   +
Sbjct: 235 KSAIEALETFEVSSS--EGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRN 294

Query: 196 SCPLCRFKLPSDD 209
           SCP+CRF+L +DD
Sbjct: 295 SCPVCRFQLETDD 305

[Close]

BLAST of Lcy05g003880 vs. ExPASy TrEMBL
Match: A0A6J1JS41 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111488408 PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 3.2e-157
Identity = 294/323 (91.02%), Postives = 307/323 (95.05%), Query Frame = 0


Query: 1   MSSATAAATTAAERHTYWCHECDMSVTLVSP---SSSSSSSSSSSSSLLCPHCLTDFLEH 60
           MSSA+AA   AAERHTYWCHECDMSVTLVSP   SSSSSSSSSSSSSLLCPHCLTDFLEH
Sbjct: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH 60

Query: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVVVDPLPPASDDNYLLSSPQFLRLFQQLAD 120
           MDFTIPTSSSSISDHPISSSSPPDSDPSSFV+VDPLP  SDDNYLLSSPQFLRLFQQLAD
Sbjct: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120

Query: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSSMLEEDPVLICAICKDQFLLEVEAKQLP 180
           SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSS+MLEEDP+LICAICKD+FLL+VEAKQLP
Sbjct: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLDVEAKQLP 180

Query: 181 CSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDHVRCRGATMALLRARDLMHQEDSYGL 240
           CSHLYHPDCILPWLSNHDSCPLCR+KLPSD+PSDHVRCRGATMALLRARDLM QEDSYGL
Sbjct: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240

Query: 241 RTTLRHIARRHSSIFSEGIQVDSSQSPTQLGVAEMGSGEQTDSGETVSSVATDDGIVIVS 300
           RTTL H+ARRHSSIFSEG+QVD SQSPTQLGVA MG+GEQTDS ETVSSVATDDGIVIV+
Sbjct: 241 RTTLEHMARRHSSIFSEGVQVDPSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300

Query: 301 SSGDENGFVGMDGGSINEDAGTV 321
           SSGDENGFV MD G INEDAGT+
Sbjct: 301 SSGDENGFVLMD-GPINEDAGTL 322

[Close]

BLAST of Lcy05g003880 vs. ExPASy TrEMBL
Match: A0A6J1GMD4 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111455823 PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 3.2e-157
Identity = 295/324 (91.05%), Postives = 307/324 (94.75%), Query Frame = 0


Query: 1   MSSATAAATTAAERHTYWCHECDMSVTLVSP----SSSSSSSSSSSSSLLCPHCLTDFLE 60
           MSSA+AA   AAERHTYWCHECDMSVTLVSP    SSSSSSSSSSSSSLLCPHCLTDFLE
Sbjct: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSSLLCPHCLTDFLE 60

Query: 61  HMDFTIPTSSSSISDHPISSSSPPDSDPSSFVVVDPLPPASDDNYLLSSPQFLRLFQQLA 120
           HMDFTIPTSSSSISDHP SSSSPPDSDPSSFV+VDPLP  SDDNYLLSSPQFLRLFQQLA
Sbjct: 61  HMDFTIPTSSSSISDHPGSSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA 120

Query: 121 DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSSMLEEDPVLICAICKDQFLLEVEAKQL 180
           DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSS+MLEEDP+LICAICKD+FLLEVEAKQL
Sbjct: 121 DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL 180

Query: 181 PCSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDHVRCRGATMALLRARDLMHQEDSYG 240
           PCSHLYHPDCILPWLSNHDSCPLCR+KLPSD+PSDHVRCRGATMALLRARDLM QEDSYG
Sbjct: 181 PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG 240

Query: 241 LRTTLRHIARRHSSIFSEGIQVDSSQSPTQLGVAEMGSGEQTDSGETVSSVATDDGIVIV 300
           LRTTL H+ARRHSSIFSEG+QVDSSQSPTQLGVA MG+GEQTDS ETVSSVATDDGIVIV
Sbjct: 241 LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV 300

Query: 301 SSSGDENGFVGMDGGSINEDAGTV 321
           +SSGDENGFV MD G INEDAGT+
Sbjct: 301 NSSGDENGFVVMD-GPINEDAGTL 323

[Close]

BLAST of Lcy05g003880 vs. ExPASy TrEMBL
Match: A0A5D3CET0 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001260 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 7.2e-149
Identity = 287/322 (89.13%), Postives = 296/322 (91.93%), Query Frame = 0


Query: 1   MSSATAAATTAAERHTYWCHECDMSVTLVSP-SSSSSSSSSSSSSLLCPHCLTDFLEHMD 60
           MSSAT  AT AAERHTYWCHECDMSVTLVSP SSSSSSSSSSSSSLLCPHCLTDFLEHMD
Sbjct: 1   MSSATITATAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSLLCPHCLTDFLEHMD 60

Query: 61  FTIPTSSSSISDHPISSSSPPDSDPSSFVVVDPLPPASDDNYLLSSPQFLRLFQQLADSS 120
           FTIPTSSSSISDHP SSSSP DSDPSSFVVVDPLP  SDDNYLL+SPQFLRLFQ LADSS
Sbjct: 61  FTIPTSSSSISDHPNSSSSPTDSDPSSFVVVDPLPITSDDNYLLNSPQFLRLFQHLADSS 120

Query: 121 DSDFAPSVPFNPFTPIKASVMAIPTIKVSSSMLEEDPVLICAICKDQFLLEVEAKQLPCS 180
           +SDF PSVPFNPFTPIKASVMAIPTIKV+S++L+EDPVLICAICKDQFLLEVEAKQLPCS
Sbjct: 121 ESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPCS 180

Query: 181 HLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDHVRCRGATMALLRARDLMHQEDSYGLRT 240
           HLYHPDCILPWLSNHDSCPLCRFKLPSDDPSD VRCR  T ALLRARDLMHQEDSYGLRT
Sbjct: 181 HLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCR--TSALLRARDLMHQEDSYGLRT 240

Query: 241 TLRHIARRHSSIFSEGIQVDSSQSPTQLGVAEMGSGEQTDSGETVSSVATDDGIVIVSSS 300
           TL  +ARRHSSI SEGI VDS QSPTQ GVA M SGEQTDS ETVSSVATDDGIVIV+S+
Sbjct: 241 TLELMARRHSSISSEGIHVDSFQSPTQFGVAMMRSGEQTDSVETVSSVATDDGIVIVNSN 300

Query: 301 GDENGFVGMDGGSINEDAGTVV 322
           GDENGFVGMD G I EDAGTVV
Sbjct: 301 GDENGFVGMD-GPITEDAGTVV 319

[Close]

BLAST of Lcy05g003880 vs. ExPASy TrEMBL
Match: A0A1S3CE92 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499880 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.3e-147
Identity = 285/322 (88.51%), Postives = 294/322 (91.30%), Query Frame = 0


Query: 1   MSSATAAATTAAERHTYWCHECDMSVTLVSP-SSSSSSSSSSSSSLLCPHCLTDFLEHMD 60
           MSSAT  A  AAERHTYWCHECDMSVTLVSP SSSSSSSSSSSSSLLCPHCLTDFLEHMD
Sbjct: 1   MSSATITAAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSLLCPHCLTDFLEHMD 60

Query: 61  FTIPTSSSSISDHPISSSSPPDSDPSSFVVVDPLPPASDDNYLLSSPQFLRLFQQLADSS 120
           FTIPTSSSSISDHP SSSSP DSDPSSFVVVDPLP  SDDNYLL+SPQFLRLFQ LADSS
Sbjct: 61  FTIPTSSSSISDHPNSSSSPTDSDPSSFVVVDPLPITSDDNYLLNSPQFLRLFQHLADSS 120

Query: 121 DSDFAPSVPFNPFTPIKASVMAIPTIKVSSSMLEEDPVLICAICKDQFLLEVEAKQLPCS 180
           +SDF PSVPFNPFTPIKASVMAIPTIKV+S++L+ED VLICAICKDQFLLEVEAKQLPCS
Sbjct: 121 ESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDQVLICAICKDQFLLEVEAKQLPCS 180

Query: 181 HLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDHVRCRGATMALLRARDLMHQEDSYGLRT 240
           HLYHPDCILPWLSNHDSCPLCRFKLPSDDPSD VRCR  T ALLRARDLMHQEDSYGLRT
Sbjct: 181 HLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCR--TSALLRARDLMHQEDSYGLRT 240

Query: 241 TLRHIARRHSSIFSEGIQVDSSQSPTQLGVAEMGSGEQTDSGETVSSVATDDGIVIVSSS 300
           TL  +ARRHSSI SEGI VDS QSPTQ GVA M SGEQTDS ETVSSVATDDGIVIV+S+
Sbjct: 241 TLELMARRHSSISSEGINVDSFQSPTQFGVAMMRSGEQTDSVETVSSVATDDGIVIVNSN 300

Query: 301 GDENGFVGMDGGSINEDAGTVV 322
           GDENGFVGMD G I EDAGTVV
Sbjct: 301 GDENGFVGMD-GPITEDAGTVV 319

[Close]

BLAST of Lcy05g003880 vs. ExPASy TrEMBL
Match: A0A0A0KBK3 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_7G429620 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 7.5e-146
Identity = 281/323 (87.00%), Postives = 294/323 (91.02%), Query Frame = 0


Query: 1   MSSATAAATTAAERHTYWCHECDMSVTLVSP--SSSSSSSSSSSSSLLCPHCLTDFLEHM 60
           MSSAT  AT AAERHTYWCHECDMSVTLVSP  SSSSSSSSSSSSSL+CPHCLTDF+EHM
Sbjct: 1   MSSATITATAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSLVCPHCLTDFIEHM 60

Query: 61  DFTIPTSSSSISDHPISSSSPPDSDPSSFVVVDPLPPASDDNYLLSSPQFLRLFQQLADS 120
           DFTIPTSSSSISD+P SSS P DSDPSSFV VDPLP  SDDNYLL+SPQFLRLFQ LADS
Sbjct: 61  DFTIPTSSSSISDNPNSSSPPTDSDPSSFVFVDPLPITSDDNYLLNSPQFLRLFQHLADS 120

Query: 121 SDSDFAPSVPFNPFTPIKASVMAIPTIKVSSSMLEEDPVLICAICKDQFLLEVEAKQLPC 180
           S+SDF PSVPFNPFTPIKASVMAIPTIKV+S++L+EDPVLICAICKDQFLLEVEAKQLPC
Sbjct: 121 SESDFVPSVPFNPFTPIKASVMAIPTIKVTSALLDEDPVLICAICKDQFLLEVEAKQLPC 180

Query: 181 SHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDHVRCRGATMALLRARDLMHQEDSYGLR 240
           SHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSD VRCR  T ALLRARDLMHQEDSYGLR
Sbjct: 181 SHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDRVRCR--TSALLRARDLMHQEDSYGLR 240

Query: 241 TTLRHIARRHSSIFSEGIQVDSSQSPTQLGVAEMGSGEQTDSGETVSSVATDDGIVIVSS 300
           TTL  +ARRHSSI SEGI VDS QSPTQ GVA M SGEQTDS ETVSSVATDDGIVIV+S
Sbjct: 241 TTLELMARRHSSISSEGIHVDSFQSPTQFGVAMMESGEQTDSVETVSSVATDDGIVIVNS 300

Query: 301 SGDENGFVGMDGGSINEDAGTVV 322
           +GDENGF+GMD G I EDAGTVV
Sbjct: 301 NGDENGFLGMD-GPITEDAGTVV 320

[Close]

BLAST of Lcy05g003880 vs. NCBI nr
Match: XP_023549060.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 567.4 bits (1461), Expect = 7.9e-158
Identity = 296/324 (91.36%), Postives = 308/324 (95.06%), Query Frame = 0


Query: 1   MSSATAAATTAAERHTYWCHECDMSVTLVSP----SSSSSSSSSSSSSLLCPHCLTDFLE 60
           MSSA+AA   AAERHTYWCHECDMSVTLVSP    SSSSSSSSSSSSSLLCPHCLTDFLE
Sbjct: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSSLLCPHCLTDFLE 60

Query: 61  HMDFTIPTSSSSISDHPISSSSPPDSDPSSFVVVDPLPPASDDNYLLSSPQFLRLFQQLA 120
           HMDFTIPTSSSSISDHPISSSSPPDSDPSSFV+VDPLP  SDDNYLLSSPQFLRLFQQLA
Sbjct: 61  HMDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA 120

Query: 121 DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSSMLEEDPVLICAICKDQFLLEVEAKQL 180
           DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSS+MLEEDP+LICAICKD+FLLEVEAKQL
Sbjct: 121 DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL 180

Query: 181 PCSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDHVRCRGATMALLRARDLMHQEDSYG 240
           PCSHLYHPDCILPWLSNHDSCPLCR+KLPSD+PSDHVRCRGATMALLRARDLM QEDSYG
Sbjct: 181 PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG 240

Query: 241 LRTTLRHIARRHSSIFSEGIQVDSSQSPTQLGVAEMGSGEQTDSGETVSSVATDDGIVIV 300
           LRTTL H+ARRHSSIFSEG+QVDSSQSPTQLGVA MG+GEQTDS ETVSSVATDDGIVIV
Sbjct: 241 LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV 300

Query: 301 SSSGDENGFVGMDGGSINEDAGTV 321
           +SSGDENGFV MD G INEDAGT+
Sbjct: 301 NSSGDENGFVVMD-GPINEDAGTL 323

[Close]

BLAST of Lcy05g003880 vs. NCBI nr
Match: XP_022991911.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima])

HSP 1 Score: 564.3 bits (1453), Expect = 6.7e-157
Identity = 294/323 (91.02%), Postives = 307/323 (95.05%), Query Frame = 0


Query: 1   MSSATAAATTAAERHTYWCHECDMSVTLVSP---SSSSSSSSSSSSSLLCPHCLTDFLEH 60
           MSSA+AA   AAERHTYWCHECDMSVTLVSP   SSSSSSSSSSSSSLLCPHCLTDFLEH
Sbjct: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH 60

Query: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVVVDPLPPASDDNYLLSSPQFLRLFQQLAD 120
           MDFTIPTSSSSISDHPISSSSPPDSDPSSFV+VDPLP  SDDNYLLSSPQFLRLFQQLAD
Sbjct: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120

Query: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSSMLEEDPVLICAICKDQFLLEVEAKQLP 180
           SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSS+MLEEDP+LICAICKD+FLL+VEAKQLP
Sbjct: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLDVEAKQLP 180

Query: 181 CSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDHVRCRGATMALLRARDLMHQEDSYGL 240
           CSHLYHPDCILPWLSNHDSCPLCR+KLPSD+PSDHVRCRGATMALLRARDLM QEDSYGL
Sbjct: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240

Query: 241 RTTLRHIARRHSSIFSEGIQVDSSQSPTQLGVAEMGSGEQTDSGETVSSVATDDGIVIVS 300
           RTTL H+ARRHSSIFSEG+QVD SQSPTQLGVA MG+GEQTDS ETVSSVATDDGIVIV+
Sbjct: 241 RTTLEHMARRHSSIFSEGVQVDPSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300

Query: 301 SSGDENGFVGMDGGSINEDAGTV 321
           SSGDENGFV MD G INEDAGT+
Sbjct: 301 SSGDENGFVLMD-GPINEDAGTL 322

[Close]

BLAST of Lcy05g003880 vs. NCBI nr
Match: XP_022953211.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata])

HSP 1 Score: 564.3 bits (1453), Expect = 6.7e-157
Identity = 295/324 (91.05%), Postives = 307/324 (94.75%), Query Frame = 0


Query: 1   MSSATAAATTAAERHTYWCHECDMSVTLVSP----SSSSSSSSSSSSSLLCPHCLTDFLE 60
           MSSA+AA   AAERHTYWCHECDMSVTLVSP    SSSSSSSSSSSSSLLCPHCLTDFLE
Sbjct: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSSLLCPHCLTDFLE 60

Query: 61  HMDFTIPTSSSSISDHPISSSSPPDSDPSSFVVVDPLPPASDDNYLLSSPQFLRLFQQLA 120
           HMDFTIPTSSSSISDHP SSSSPPDSDPSSFV+VDPLP  SDDNYLLSSPQFLRLFQQLA
Sbjct: 61  HMDFTIPTSSSSISDHPGSSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLA 120

Query: 121 DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSSMLEEDPVLICAICKDQFLLEVEAKQL 180
           DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSS+MLEEDP+LICAICKD+FLLEVEAKQL
Sbjct: 121 DSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQL 180

Query: 181 PCSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDHVRCRGATMALLRARDLMHQEDSYG 240
           PCSHLYHPDCILPWLSNHDSCPLCR+KLPSD+PSDHVRCRGATMALLRARDLM QEDSYG
Sbjct: 181 PCSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYG 240

Query: 241 LRTTLRHIARRHSSIFSEGIQVDSSQSPTQLGVAEMGSGEQTDSGETVSSVATDDGIVIV 300
           LRTTL H+ARRHSSIFSEG+QVDSSQSPTQLGVA MG+GEQTDS ETVSSVATDDGIVIV
Sbjct: 241 LRTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIV 300

Query: 301 SSSGDENGFVGMDGGSINEDAGTV 321
           +SSGDENGFV MD G INEDAGT+
Sbjct: 301 NSSGDENGFVVMD-GPINEDAGTL 323

[Close]

BLAST of Lcy05g003880 vs. NCBI nr
Match: KAG7014205.1 (E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 554.7 bits (1428), Expect = 5.3e-154
Identity = 286/309 (92.56%), Postives = 297/309 (96.12%), Query Frame = 0


Query: 1   MSSATAAATTAAERHTYWCHECDMSVTLVSP---SSSSSSSSSSSSSLLCPHCLTDFLEH 60
           MSSA+AA   AAERHTYWCHECDMSVTLVSP   SSSSSSSSSSSSSLLCPHCLTDFLEH
Sbjct: 1   MSSASAATAAAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSSSSLLCPHCLTDFLEH 60

Query: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVVVDPLPPASDDNYLLSSPQFLRLFQQLAD 120
           MDFTIPTSSSSISDHPISSSSPPDSDPSSFV+VDPLP  SDDNYLLSSPQFLRLFQQLAD
Sbjct: 61  MDFTIPTSSSSISDHPISSSSPPDSDPSSFVIVDPLPTTSDDNYLLSSPQFLRLFQQLAD 120

Query: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSSMLEEDPVLICAICKDQFLLEVEAKQLP 180
           SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSS+MLEEDP+LICAICKD+FLLEVEAKQLP
Sbjct: 121 SSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSAMLEEDPILICAICKDKFLLEVEAKQLP 180

Query: 181 CSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSDHVRCRGATMALLRARDLMHQEDSYGL 240
           CSHLYHPDCILPWLSNHDSCPLCR+KLPSD+PSDHVRCRGATMALLRARDLM QEDSYGL
Sbjct: 181 CSHLYHPDCILPWLSNHDSCPLCRYKLPSDEPSDHVRCRGATMALLRARDLMPQEDSYGL 240

Query: 241 RTTLRHIARRHSSIFSEGIQVDSSQSPTQLGVAEMGSGEQTDSGETVSSVATDDGIVIVS 300
           RTTL H+ARRHSSIFSEG+QVDSSQSPTQLGVA MG+GEQTDS ETVSSVATDDGIVIV+
Sbjct: 241 RTTLEHMARRHSSIFSEGVQVDSSQSPTQLGVAVMGNGEQTDSVETVSSVATDDGIVIVN 300

Query: 301 SSGDENGFV 307
           SSGDENGFV
Sbjct: 301 SSGDENGFV 309

[Close]

BLAST of Lcy05g003880 vs. NCBI nr
Match: XP_038899359.1 (E3 ubiquitin-protein ligase RING1-like [Benincasa hispida])

HSP 1 Score: 554.3 bits (1427), Expect = 6.9e-154
Identity = 288/320 (90.00%), Postives = 301/320 (94.06%), Query Frame = 0


Query: 2   SSATAAATTAAERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSLLCPHCLTDFLEHMDFT 61
           S+AT  ATTAAERHTYWCHECDMSVTLVSP   SSSSSSSSSSLLCPHCLTDFLEHMDFT
Sbjct: 5   SAATVTATTAAERHTYWCHECDMSVTLVSP---SSSSSSSSSSLLCPHCLTDFLEHMDFT 64

Query: 62  IPTSSSSISDHPISSSSPPDSDPSSFVVVDPLPPASDDNYLLSSPQFLRLFQQLADSSDS 121
           IPTSSSSISDHP SSSSPPDSDPSSFVVVDP+P  +DDNYLL+SPQFLRLFQQLADSSDS
Sbjct: 65  IPTSSSSISDHPNSSSSPPDSDPSSFVVVDPIPITTDDNYLLNSPQFLRLFQQLADSSDS 124

Query: 122 DFAPSVPFNPFTPIKASVMAIPTIKVSSSMLEEDPVLICAICKDQFLLEVEAKQLPCSHL 181
           DF PSVPFNPFTPIKASVMAIPTIKV+S++LEEDPVLICAICKDQFLLEVEAKQLPCSHL
Sbjct: 125 DFVPSVPFNPFTPIKASVMAIPTIKVTSALLEEDPVLICAICKDQFLLEVEAKQLPCSHL 184

Query: 182 YHPDCILPWLSNHDSCPLCRFKLPSDDPSDHVRCRGATMALLRARDLMHQEDSYGLRTTL 241
           YHPDCILPWLSNHDSCPLCRFKLPSDDPSDHVRCR AT ALLRARDL+HQEDSYGLRTTL
Sbjct: 185 YHPDCILPWLSNHDSCPLCRFKLPSDDPSDHVRCRRATTALLRARDLIHQEDSYGLRTTL 244

Query: 242 RHIARRHSSIFSEGIQVDSSQSPTQLGVAEMGSGEQTDSGETVSSVATDDGIVIVSSSGD 301
            H+ARRH SI+SEGIQVD SQS TQ GVAEMG+GEQTDS ETVSSVATDDGIVIV+S+GD
Sbjct: 245 EHMARRHISIYSEGIQVDLSQSSTQFGVAEMGNGEQTDSVETVSSVATDDGIVIVNSNGD 304

Query: 302 ENGFVGMDGGSINEDAGTVV 322
           ENGFVGMD G INEDAGTVV
Sbjct: 305 ENGFVGMD-GPINEDAGTVV 320

[Close]

BLAST of Lcy05g003880 vs. TAIR 10
Match: AT3G60080.1 (RING/U-box superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 1.1e-45
Identity = 116/273 (42.49%), Postives = 160/273 (58.61%), Query Frame = 0


Query: 1   MSSATAAATTA---AERHTYWCHECDMSVTLVSPSSSSSSSSSSSSSLLCPHCLTDFLEH 60
           MSS+T   TT     ER TYWCHECDMS++L+    SSS S S SS LLCP C  DFLE 
Sbjct: 1   MSSSTTTTTTVHGEPERRTYWCHECDMSLSLL----SSSDSDSDSSPLLCPQCRVDFLER 60

Query: 61  MDFTIPTSSSSISDHPISSSSPPD------SDPSSFVVVDPLPPASDDNYLLSSPQFLRL 120
           MD    +SSS++ D  I      D       D   +  VDP    SDDN+LL SP   RL
Sbjct: 61  MDH--DSSSSNLFDVTIGDFEEQDGENDDEDDEEDWCFVDP-AVNSDDNFLLDSPYLHRL 120

Query: 121 FQQLADSSDSDFAPSVPFNPFTPIKAS-VMAIPTIKVSSSML------EEDPVLICAICK 180
            + LA  +    + S   +  + +K+S + +IPTI++SSS+L      + D VL+CA+CK
Sbjct: 121 LRHLASDNSGSSSSSSSSSSSSLLKSSDIDSIPTIQISSSLLCSTDDSDPDSVLLCAVCK 180

Query: 181 DQFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPS------DDPSDHVRCRGA 240
           + F++   A++LPCSH+YH DCI+PWLS+H+SCPLCRF+LP+            +R R +
Sbjct: 181 EDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCRFELPTTAKVGIGGSEAEMRIRLS 240

Query: 241 TMALLRARDLMHQEDSYGLRTTLRHIARRHSSI 252
            +A + A     ++D  G+R  LR +ARRH  +
Sbjct: 241 DLATIAADGDDVEDDWLGIRNALRRLARRHEQM 266

[Close]

BLAST of Lcy05g003880 vs. TAIR 10
Match: AT2G44330.1 (RING/U-box superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-18
Identity = 58/161 (36.02%), Postives = 84/161 (52.17%), Query Frame = 0


Query: 55  LEHMDFTIPTSSSSISDHPISSSSPPDSDPSSFVVVDPLPPASDDNYLLSSPQFLRLFQQ 114
           LE  D+T P  +  +    + S+SPP             P  +  +Y  SS  F      
Sbjct: 10  LEMRDYTCPECNIGLRVLSLPSASPP-----------YCPLCNVASYFTSSTPFEVGPNP 69

Query: 115 LADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSSML----EEDPVLICAICKDQFLLE 174
             D  +S F          P++    ++PTIK+SSSML     +D  L CAIC++ F++ 
Sbjct: 70  FEDDEESQF--------LDPME----SLPTIKISSSMLSSASSDDSALPCAICREDFVVG 129

Query: 175 VEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPSDDPSD 212
             A++LPC+HLYH DCI+PWL++H+SCPLCR +LP     D
Sbjct: 130 ESARRLPCNHLYHNDCIIPWLTSHNSCPLCRVELPVASSED 147

[Close]

BLAST of Lcy05g003880 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-18
Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 0


Query: 106 PQFLRLFQQLADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSSMLEEDPVLICAICKD 165
           P    L +QL+  +     P  P       K+S+ A+PTIK++   L+      C +CKD
Sbjct: 140 PGLEELIEQLSSGTHHRGPPPAP-------KSSIDALPTIKITQKHLKSSD-SHCPVCKD 199

Query: 166 QFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPS 207
           +F L+ EAKQ+PC H+YH DCI+PWL  H+SCP+CR +LPS
Sbjct: 200 EFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS 232

[Close]

BLAST of Lcy05g003880 vs. TAIR 10
Match: AT3G56580.1 (RING/U-box superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-18
Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 0


Query: 106 PQFLRLFQQLADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSSMLEEDPVLICAICKD 165
           P    L +QL+  +     P  P       K+S+ A+PTIK++   L+      C +CKD
Sbjct: 140 PGLEELIEQLSSGTHHRGPPPAP-------KSSIDALPTIKITQKHLKSSD-SHCPVCKD 199

Query: 166 QFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPS 207
           +F L+ EAKQ+PC H+YH DCI+PWL  H+SCP+CR +LPS
Sbjct: 200 EFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS 232

[Close]

BLAST of Lcy05g003880 vs. TAIR 10
Match: AT3G56580.3 (RING/U-box superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-18
Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 0


Query: 106 PQFLRLFQQLADSSDSDFAPSVPFNPFTPIKASVMAIPTIKVSSSMLEEDPVLICAICKD 165
           P    L +QL+  +     P  P       K+S+ A+PTIK++   L+      C +CKD
Sbjct: 140 PGLEELIEQLSSGTHHRGPPPAP-------KSSIDALPTIKITQKHLKSSD-SHCPVCKD 199

Query: 166 QFLLEVEAKQLPCSHLYHPDCILPWLSNHDSCPLCRFKLPS 207
           +F L+ EAKQ+PC H+YH DCI+PWL  H+SCP+CR +LPS
Sbjct: 200 EFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS 232

The following BLAST results are available for this feature:

BLAST of Lcy05g003880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AK4	1.7e-17	43.56	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
O22197	6.3e-17	42.57	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q8LPN7	6.3e-17	29.54	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
P0CH30	1.4e-16	33.18	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q9SPL2	7.0e-16	49.32	E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana OX=3702 GN=CIP8 PE=1 SV...	[more]

BLAST of Lcy05g003880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JS41	3.2e-157	91.02	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111488408 P...	[more]
A0A6J1GMD4	3.2e-157	91.05	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111455823...	[more]
A0A5D3CET0	7.2e-149	89.13	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CE92	2.3e-147	88.51	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103499880 PE=4 ...	[more]
A0A0A0KBK3	7.5e-146	87.00	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_7G429620 PE...	[more]

BLAST of Lcy05g003880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549060.1	7.9e-158	91.36	E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022991911.1	6.7e-157	91.02	E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima]	[more]
XP_022953211.1	6.7e-157	91.05	E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]	[more]
KAG7014205.1	5.3e-154	92.56	E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038899359.1	6.9e-154	90.00	E3 ubiquitin-protein ligase RING1-like [Benincasa hispida]	[more]

BLAST of Lcy05g003880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60080.1	1.1e-45	42.49	RING/U-box superfamily protein	[more]
AT2G44330.1	1.2e-18	36.02	RING/U-box superfamily protein	[more]
AT3G56580.2	1.2e-18	43.56	RING/U-box superfamily protein	[more]
AT3G56580.1	1.2e-18	43.56	RING/U-box superfamily protein	[more]
AT3G56580.3	1.2e-18	43.56	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 160..200 e-value: 2.5E-6 score: 37.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 160..201 e-value: 4.2E-10 score: 39.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 160..201 score: 12.149959
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 16..58 e-value: 2.8E-9 score: 37.1
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 132..207 e-value: 4.9E-18 score: 66.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..89
None	No IPR available	PANTHER	PTHR15710:SF89	FINGER PROTEIN, PUTATIVE-RELATED	coord: 1..274
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 1..274
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 143..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g003880.1	Lcy05g003880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity