Lcy05g003820 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g003820
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Non-specific lipid-transfer protein
Location	Chr05: 3422711 .. 3423670 (-)
RNA-Seq Expression	Lcy05g003820
Synteny	Lcy05g003820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATAAAAAGCTCTTTTGTCAAACAAGCTACCATTTTTCCTTTTCTTGCACTTTTGAGCTTTCTCTCCCAAACCTCACTACATAACCTCTTCATCTCCAAGCTCCAAAAAGCACTTTTTCCATAACCATAAGCTAGAAGCCATGGCATCTCTTGGAGCAGCCATCCCAAAGCTTGCAGCTTTGATGTTTGTGATGTTATTGCTTCTTCAAGAATCGTCAGAGGCTGCAATCTCATGCAGTGATGTGACTAAGGATTTGACTCCATGTGTGAGCTACCTTGTGAGTGGCAGTGGGAAGCCGCCAAGTGCTTGTTGTGATGGTGCAAAAGCACTTTCCTCTGCAGCCACAACCACTGCTGACAAGAAGGCTGCATGCGAATGCATCAAGTCAGCTGCTAGTAATGTGAATTACAACGCTAAATTGGCTCAAGATCTTCCGAACAATTGCGGCATTACCCTGCCTTTCTCCGTCTCCGCTGGCGTCGATTGTTCTAAGTATGAAAATTTAAGGACTAAAATAGAATTGAAAAAAAAATCGTCTTGAAACTATTGTGCGTTTGAAATCATTATTAGTTCTAATCCCGTGATTTTAACCTCTAGCAAAAACAATATTTTGGAAATTAATTCTCATCCCTGGTTGCTTGTTTTCTTCCTTATTTTATTTTTATTTGAACAAACTAAATGCTAGCTAGTTAACTTAGCTTCTTTTTCTTTTTTGTTTTTAATTTTCAGGATTAGTTGATTTTCTGGGACAAGATTTGATCAGAAGGGACCAGAAATGCCAGAGCATTCTACTATAAAGTTGGAGAAATTACTACATATTATGTAATAATTAAAATAAAACTAGCTGGAAAATGGAATCTATAATCTCATGGATTTTCAGATTCCTTTATGTCTTAATATCATGTGCTGCAGTGTACTTTTGTTTCTTCTTATATAAATATAAAAATATATTATCC

mRNA sequence

CAAAATAAAAAGCTCTTTTGTCAAACAAGCTACCATTTTTCCTTTTCTTGCACTTTTGAGCTTTCTCTCCCAAACCTCACTACATAACCTCTTCATCTCCAAGCTCCAAAAAGCACTTTTTCCATAACCATAAGCTAGAAGCCATGGCATCTCTTGGAGCAGCCATCCCAAAGCTTGCAGCTTTGATGTTTGTGATGTTATTGCTTCTTCAAGAATCGTCAGAGGCTGCAATCTCATGCAGTGATGTGACTAAGGATTTGACTCCATGTGTGAGCTACCTTGTGAGTGGCAGTGGGAAGCCGCCAAGTGCTTGTTGTGATGGTGCAAAAGCACTTTCCTCTGCAGCCACAACCACTGCTGACAAGAAGGCTGCATGCGAATGCATCAAGTCAGCTGCTAGTAATGTGAATTACAACGCTAAATTGGCTCAAGATCTTCCGAACAATTGCGGCATTACCCTGCCTTTCTCCGTCTCCGCTGGCGTCGATTGTTCTAAGATTAGTTGATTTTCTGGGACAAGATTTGATCAGAAGGGACCAGAAATGCCAGAGCATTCTACTATAAAGTTGGAGAAATTACTACATATTATGTAATAATTAAAATAAAACTAGCTGGAAAATGGAATCTATAATCTCATGGATTTTCAGATTCCTTTATGTCTTAATATCATGTGCTGCAGTGTACTTTTGTTTCTTCTTATATAAATATAAAAATATATTATCC

Coding sequence (CDS)

ATGGCATCTCTTGGAGCAGCCATCCCAAAGCTTGCAGCTTTGATGTTTGTGATGTTATTGCTTCTTCAAGAATCGTCAGAGGCTGCAATCTCATGCAGTGATGTGACTAAGGATTTGACTCCATGTGTGAGCTACCTTGTGAGTGGCAGTGGGAAGCCGCCAAGTGCTTGTTGTGATGGTGCAAAAGCACTTTCCTCTGCAGCCACAACCACTGCTGACAAGAAGGCTGCATGCGAATGCATCAAGTCAGCTGCTAGTAATGTGAATTACAACGCTAAATTGGCTCAAGATCTTCCGAACAATTGCGGCATTACCCTGCCTTTCTCCGTCTCCGCTGGCGTCGATTGTTCTAAGATTAGTTGA

Protein sequence

MASLGAAIPKLAALMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDGAKALSSAATTTADKKAACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSKIS

Homology

[Close]

BLAST of Lcy05g003820 vs. ExPASy Swiss-Prot
Match: Q9ZPW9 (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana OX=3702 GN=LTP8 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.1e-25
Identity = 59/109 (54.13%), Postives = 77/109 (70.64%), Query Frame = 0


Query: 11  LAALMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDGAKALSSAATT 70
           LA +  + +  +   SE+AISCS V +DL PCVSYL SGSG PP  CCDG K+L++A TT
Sbjct: 7   LAIISVLGIFFIPRYSESAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTT 66

Query: 71  TADKKAACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSKI 120
           +ADKKAAC+CIKS A++V    +LAQ L +NCG +LP   S  VDC+ +
Sbjct: 67  SADKKAACQCIKSVANSVTVKPELAQALASNCGASLPVDASPTVDCTTV 115

[Close]

BLAST of Lcy05g003820 vs. ExPASy Swiss-Prot
Match: Q43767 (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare OX=4513 GN=LTP4.1 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.1e-22
Identity = 59/119 (49.58%), Postives = 82/119 (68.91%), Query Frame = 0


Query: 1   MASLGAAIPKLAALMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDG 60
           MA   A+   L AL+  MLL+   +++AAISC  V+  L+PC+SY      KPP+ACC G
Sbjct: 1   MARAAASQLVLVALVAAMLLV---AADAAISCGQVSSALSPCISYARGNGAKPPAACCSG 60

Query: 61  AKALSSAATTTADKKAACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSKI 120
            K L+ AA +TADK+AAC+CIKSAA  +  NA  A  +P+ CG+++P+++SA VDCSKI
Sbjct: 61  VKRLAGAAQSTADKQAACKCIKSAAGGL--NAGKAAGIPSMCGVSVPYAISASVDCSKI 114

[Close]

BLAST of Lcy05g003820 vs. ExPASy Swiss-Prot
Match: Q42842 (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare OX=4513 GN=LTP4.3 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.5e-21
Identity = 58/119 (48.74%), Postives = 80/119 (67.23%), Query Frame = 0


Query: 1   MASLGAAIPKLAALMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDG 60
           MA   A    L A++  MLL+   +++AAISC  V+  L+PC+SY      KPP ACC G
Sbjct: 1   MARAAATQLVLVAMVAAMLLV---ATDAAISCGQVSSALSPCISYARGNGAKPPVACCSG 60

Query: 61  AKALSSAATTTADKKAACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSKI 120
            K L+ AA +TADK+AAC+CIKSAA  +  NA  A  +P+ CG+++P+++SA VDCSKI
Sbjct: 61  VKRLAGAAQSTADKQAACKCIKSAAGGL--NAGKAAGIPSMCGVSVPYAISASVDCSKI 114

[Close]

BLAST of Lcy05g003820 vs. ExPASy Swiss-Prot
Match: Q43875 (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare OX=4513 GN=LTP4.2 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 6.0e-21
Identity = 57/119 (47.90%), Postives = 80/119 (67.23%), Query Frame = 0


Query: 1   MASLGAAIPKLAALMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDG 60
           MA   A    L A++  ML++   +++AAISC  V+  L+PC+SY      KPP ACC G
Sbjct: 1   MARAAATQLVLVAMVAAMLIV---ATDAAISCGQVSSALSPCISYARGNGAKPPVACCSG 60

Query: 61  AKALSSAATTTADKKAACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSKI 120
            K L+ AA +TADK+AAC+CIKSAA  +  NA  A  +P+ CG+++P+++SA VDCSKI
Sbjct: 61  VKRLAGAAQSTADKQAACKCIKSAAGGL--NAGKAAGIPSMCGVSVPYAISASVDCSKI 114

[Close]

BLAST of Lcy05g003820 vs. ExPASy Swiss-Prot
Match: Q2QYL2 (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica OX=39947 GN=LTP2-B PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.3e-19
Identity = 48/111 (43.24%), Postives = 77/111 (69.37%), Query Frame = 0


Query: 11  LAALMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDGAKALSSAATT 70
           L AL+  +LL    ++ AAISC  V   ++PC+SY   GSG P +ACC G ++L+SAATT
Sbjct: 8   LVALVAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSG-PSAACCSGVRSLNSAATT 67

Query: 71  TADKKAACECIKSAASNVN-YNAKLAQDLPNNCGITLPFSVSAGVDCSKIS 121
           TAD++ AC C+K+ A +++  NA  A  +P+ CG+++P+++S  +DCS ++
Sbjct: 68  TADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSVN 117

[Close]

BLAST of Lcy05g003820 vs. ExPASy TrEMBL
Match: A0A0A0K657 (Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_7G430200 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.5e-43
Identity = 96/120 (80.00%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MASLGAAIPKLAALMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDG 60
           M +L AAIPKL A++  + LLLQ  S+A ISCSDVTKDL PCVSYL+SGSGKPPSACCDG
Sbjct: 1   MVTLRAAIPKLGAVLLFVFLLLQ-VSKATISCSDVTKDLMPCVSYLMSGSGKPPSACCDG 60

Query: 61  AKALSSAATTTADKKAACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSKIS 120
           AKALSSAAT++ADKKAACECIKSAASNVNYN KLAQDLP+NCGI+LPFS+SAG+DCSKI+
Sbjct: 61  AKALSSAATSSADKKAACECIKSAASNVNYNVKLAQDLPSNCGISLPFSISAGIDCSKIN 119

[Close]

BLAST of Lcy05g003820 vs. ExPASy TrEMBL
Match: A0A1S3CEM4 (Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103499873 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 8.4e-42
Identity = 94/115 (81.74%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 6   AAIPKLAALMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDGAKALS 65
           A IPKL A++  + LLL   S+A ISCSDVTKDL PCVSYLVSGSGKPPSACCDGAKALS
Sbjct: 2   ATIPKLGAILLFVFLLL-GVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALS 61

Query: 66  SAATTTADKKAACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSKIS 121
           SAAT+ ADKKAAC+CIKSAASNVNYNAKLAQDLP+NCGITLPFS+SAG+DCSKI+
Sbjct: 62  SAATSGADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKIN 115

[Close]

BLAST of Lcy05g003820 vs. ExPASy TrEMBL
Match: A0A5A7UYN6 (Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001310 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.2e-41
Identity = 93/113 (82.30%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 6   AAIPKLAALMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDGAKALS 65
           A IPKL A++  + LLL   S+A ISCSDVTKDL PCVSYLVSGSGKPPSACCDGAKALS
Sbjct: 2   ATIPKLGAILLFVFLLL-GVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALS 61

Query: 66  SAATTTADKKAACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSK 119
           SAAT+ ADKKAAC+CIKSAASNVNYNAKLAQDLP+NCGITLPFS+SAG+DCSK
Sbjct: 62  SAATSGADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSK 113

[Close]

BLAST of Lcy05g003820 vs. ExPASy TrEMBL
Match: A0A6J1KW15 (Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111497697 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.3e-39
Identity = 88/107 (82.24%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 14  LMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDGAKALSSAATTTAD 73
           + F+MLLLLQE SEAAISC+DVTK+L PCVSYL+SGSGKPPSACCDGAKALS AAT++ D
Sbjct: 8   MAFMMLLLLQE-SEAAISCNDVTKNLMPCVSYLMSGSGKPPSACCDGAKALSLAATSSDD 67

Query: 74  KKAACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSKIS 121
           KKAACECIKS A NV YNAKLA+DLP NCGITLPFS+SAG+DCSKIS
Sbjct: 68  KKAACECIKSVAGNVKYNAKLAEDLPGNCGITLPFSISAGIDCSKIS 113

[Close]

BLAST of Lcy05g003820 vs. ExPASy TrEMBL
Match: A0A6J1DBS2 (Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC111019036 PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.1e-38
Identity = 89/110 (80.91%), Postives = 99/110 (90.00%), Query Frame = 0


Query: 10  KLAALMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDGAKALSSAAT 69
           KLAA++FV+LLL    SEAAISCSDV  DL PCVSYLVSGSGKPP+ACC GA AL+SAAT
Sbjct: 4   KLAAMVFVILLL--RDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAAT 63

Query: 70  TTADKKAACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSKI 120
           TTADKKAACECIKSAA ++NYNAKLAQDLP+NCGI+LPF+VSA VDCSKI
Sbjct: 64  TTADKKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSKI 111

[Close]

BLAST of Lcy05g003820 vs. NCBI nr
Match: XP_038900062.1 (non-specific lipid-transfer protein 8 [Benincasa hispida])

HSP 1 Score: 183.7 bits (465), Expect = 9.2e-43
Identity = 98/122 (80.33%), Postives = 111/122 (90.98%), Query Frame = 0


Query: 1   MASL-GAAIPKL-AALMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACC 60
           MA+L    IPKL A L+FV+L L  + S+AAISC+DVTKDL PCVSYLVSGSGKPPSACC
Sbjct: 1   MATLRSTIIPKLEAMLLFVILFLFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACC 60

Query: 61  DGAKALSSAATTTADKKAACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSK 120
           DGAKALSSAATT+ADKKAAC+CIKSAASNVNYNAKLAQDLP+NCGI+LPFS+SAG+DCSK
Sbjct: 61  DGAKALSSAATTSADKKAACQCIKSAASNVNYNAKLAQDLPSNCGISLPFSISAGIDCSK 120

[Close]

BLAST of Lcy05g003820 vs. NCBI nr
Match: XP_004135897.1 (non-specific lipid-transfer protein 8 [Cucumis sativus] >KGN45185.1 hypothetical protein Csa_015613 [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 9.2e-43
Identity = 96/120 (80.00%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 1   MASLGAAIPKLAALMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDG 60
           M +L AAIPKL A++  + LLLQ  S+A ISCSDVTKDL PCVSYL+SGSGKPPSACCDG
Sbjct: 1   MVTLRAAIPKLGAVLLFVFLLLQ-VSKATISCSDVTKDLMPCVSYLMSGSGKPPSACCDG 60

Query: 61  AKALSSAATTTADKKAACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSKIS 120
           AKALSSAAT++ADKKAACECIKSAASNVNYN KLAQDLP+NCGI+LPFS+SAG+DCSKI+
Sbjct: 61  AKALSSAATSSADKKAACECIKSAASNVNYNVKLAQDLPSNCGISLPFSISAGIDCSKIN 119

[Close]

BLAST of Lcy05g003820 vs. NCBI nr
Match: XP_008461223.1 (PREDICTED: non-specific lipid-transfer protein 8 [Cucumis melo])

HSP 1 Score: 179.5 bits (454), Expect = 1.7e-41
Identity = 94/115 (81.74%), Postives = 104/115 (90.43%), Query Frame = 0


Query: 6   AAIPKLAALMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDGAKALS 65
           A IPKL A++  + LLL   S+A ISCSDVTKDL PCVSYLVSGSGKPPSACCDGAKALS
Sbjct: 2   ATIPKLGAILLFVFLLL-GVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALS 61

Query: 66  SAATTTADKKAACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSKIS 121
           SAAT+ ADKKAAC+CIKSAASNVNYNAKLAQDLP+NCGITLPFS+SAG+DCSKI+
Sbjct: 62  SAATSGADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKIN 115

[Close]

BLAST of Lcy05g003820 vs. NCBI nr
Match: KAA0058675.1 (non-specific lipid-transfer protein 8 [Cucumis melo var. makuwa] >TYK10482.1 non-specific lipid-transfer protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 6.6e-41
Identity = 93/113 (82.30%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 6   AAIPKLAALMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDGAKALS 65
           A IPKL A++  + LLL   S+A ISCSDVTKDL PCVSYLVSGSGKPPSACCDGAKALS
Sbjct: 2   ATIPKLGAILLFVFLLL-GVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALS 61

Query: 66  SAATTTADKKAACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSK 119
           SAAT+ ADKKAAC+CIKSAASNVNYNAKLAQDLP+NCGITLPFS+SAG+DCSK
Sbjct: 62  SAATSGADKKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSK 113

[Close]

BLAST of Lcy05g003820 vs. NCBI nr
Match: XP_023514955.1 (non-specific lipid-transfer protein 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174.5 bits (441), Expect = 5.6e-40
Identity = 89/107 (83.18%), Postives = 99/107 (92.52%), Query Frame = 0


Query: 14  LMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDGAKALSSAATTTAD 73
           + F+MLLLLQE SEAAISC+DVTKDLTPCVSYL+SGSGKPPSACCDGAKALS AAT++ D
Sbjct: 8   IAFMMLLLLQE-SEAAISCNDVTKDLTPCVSYLMSGSGKPPSACCDGAKALSLAATSSDD 67

Query: 74  KKAACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSKIS 121
           KKAAC+CIKS A NV YNAKLA+DLP NCGITLPFS+SAG+DCSKIS
Sbjct: 68  KKAACQCIKSVAGNVKYNAKLAEDLPGNCGITLPFSISAGIDCSKIS 113

[Close]

BLAST of Lcy05g003820 vs. TAIR 10
Match: AT2G18370.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 2.2e-26
Identity = 59/109 (54.13%), Postives = 77/109 (70.64%), Query Frame = 0


Query: 11  LAALMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDGAKALSSAATT 70
           LA +  + +  +   SE+AISCS V +DL PCVSYL SGSG PP  CCDG K+L++A TT
Sbjct: 7   LAIISVLGIFFIPRYSESAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTT 66

Query: 71  TADKKAACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSKI 120
           +ADKKAAC+CIKS A++V    +LAQ L +NCG +LP   S  VDC+ +
Sbjct: 67  SADKKAACQCIKSVANSVTVKPELAQALASNCGASLPVDASPTVDCTTV 115

[Close]

BLAST of Lcy05g003820 vs. TAIR 10
Match: AT5G59320.1 (lipid transfer protein 3 )

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-16
Identity = 44/104 (42.31%), Postives = 63/104 (60.58%), Query Frame = 0


Query: 17  VMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDGAKALSSAATTTADKKA 76
           V+ + +  S +AAISC  V   L PC +YL  G   PPS CC G K L+S A TT D++ 
Sbjct: 12  VLTVCIVASVDAAISCGTVAGSLAPCATYLSKGGLVPPS-CCAGVKTLNSMAKTTPDRQQ 71

Query: 77  ACECIKSAASNVN-YNAKLAQDLPNNCGITLPFSVSAGVDCSKI 120
           AC CI+S A +++  N  LA  LP  CG+++P+ +S   +C+ I
Sbjct: 72  ACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNI 114

[Close]

BLAST of Lcy05g003820 vs. TAIR 10
Match: AT5G59310.1 (lipid transfer protein 4 )

HSP 1 Score: 82.8 bits (203), Expect = 2.1e-16
Identity = 43/104 (41.35%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 16  FVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDGAKALSSAATTTADKK 75
           FV+ + +  S +AAI+C  V   L+PC+ YL  G   PP  CC G K L+  A TT D++
Sbjct: 11  FVLTVFIVASVDAAITCGTVASSLSPCLGYLSKGGVVPP-PCCAGVKKLNGMAQTTPDRQ 70

Query: 76  AACECIKSAASNVNYNAKLAQDLPNNCGITLPFSVSAGVDCSKI 120
            AC C++SAA  V  N  LA  LP  CG+++P+ +S   +C+ I
Sbjct: 71  QACRCLQSAAKGV--NPSLASGLPGKCGVSIPYPISTSTNCATI 111

[Close]

BLAST of Lcy05g003820 vs. TAIR 10
Match: AT3G08770.1 (lipid transfer protein 6 )

HSP 1 Score: 81.6 bits (200), Expect = 4.6e-16
Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = 0


Query: 14  LMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDGAKALSSAATTTAD 73
           L+ V L+L     EAA+SC+ V  DL PC+SY+  G G  P+ CC+G   L S A T+ D
Sbjct: 5   LLAVCLVLALHCGEAAVSCNTVIADLYPCLSYVTQG-GPVPTLCCNGLTTLKSQAQTSVD 64

Query: 74  KKAACECIKSAASNVNYNAKLAQ---DLPNNCGITLPFSVSAGVDCSKI 120
           ++  C CIKSA   +  + +  Q   +LP+ CG+ LP+  S   DC  I
Sbjct: 65  RQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSI 112

[Close]

BLAST of Lcy05g003820 vs. TAIR 10
Match: AT3G08770.2 (lipid transfer protein 6 )

HSP 1 Score: 79.7 bits (195), Expect = 1.7e-15
Identity = 43/106 (40.57%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 14  LMFVMLLLLQESSEAAISCSDVTKDLTPCVSYLVSGSGKPPSACCDGAKALSSAATTTAD 73
           L+ V L+L     EAA+SC+ V  DL PC+SY+  G G  P+ CC+G   L S A T+ D
Sbjct: 5   LLAVCLVLALHCGEAAVSCNTVIADLYPCLSYVTQG-GPVPTLCCNGLTTLKSQAQTSVD 64

Query: 74  KKAACECIKSAASNVNYNAKLAQ---DLPNNCGITLPFSVSAGVDC 117
           ++  C CIKSA   +  + +  Q   +LP+ CG+ LP+  S   DC
Sbjct: 65  RQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDC 109

The following BLAST results are available for this feature:

BLAST of Lcy05g003820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPW9	3.1e-25	54.13	Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana OX=3702 GN=LTP8 PE...	[more]
Q43767	7.1e-22	49.58	Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare OX=4513 GN=LTP4.1 PE=...	[more]
Q42842	3.5e-21	48.74	Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare OX=4513 GN=LTP4.3 PE=...	[more]
Q43875	6.0e-21	47.90	Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare OX=4513 GN=LTP4.2 PE=...	[more]
Q2QYL2	3.3e-19	43.24	Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of Lcy05g003820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K657	4.5e-43	80.00	Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_7G430200 P...	[more]
A0A1S3CEM4	8.4e-42	81.74	Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103499873 PE=3...	[more]
A0A5A7UYN6	3.2e-41	82.30	Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1KW15	2.3e-39	82.24	Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111497697 ...	[more]
A0A6J1DBS2	1.1e-38	80.91	Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC1110190...	[more]

BLAST of Lcy05g003820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900062.1	9.2e-43	80.33	non-specific lipid-transfer protein 8 [Benincasa hispida]	[more]
XP_004135897.1	9.2e-43	80.00	non-specific lipid-transfer protein 8 [Cucumis sativus] >KGN45185.1 hypothetical...	[more]
XP_008461223.1	1.7e-41	81.74	PREDICTED: non-specific lipid-transfer protein 8 [Cucumis melo]	[more]
KAA0058675.1	6.6e-41	82.30	non-specific lipid-transfer protein 8 [Cucumis melo var. makuwa] >TYK10482.1 non...	[more]
XP_023514955.1	5.6e-40	83.18	non-specific lipid-transfer protein 8-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy05g003820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18370.1	2.2e-26	54.13	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G59320.1	1.2e-16	42.31	lipid transfer protein 3	[more]
AT5G59310.1	2.1e-16	41.35	lipid transfer protein 4	[more]
AT3G08770.1	4.6e-16	40.37	lipid transfer protein 6	[more]
AT3G08770.2	1.7e-15	40.57	lipid transfer protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 31..47 score: 40.45 coord: 73..88 score: 47.02 coord: 107..118 score: 37.05 coord: 52..66 score: 41.54 coord: 89..106 score: 32.91
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 1..119
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PROSITE	PS00597	PLANT_LTP	coord: 98..119
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 32..116 e-value: 1.1E-11 score: 54.9
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 32..116 e-value: 2.3E-8 score: 34.4
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 29..120 e-value: 2.5E-28 score: 100.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 29..119
None	No IPR available	PANTHER	PTHR33076:SF62	NON-SPECIFIC LIPID-TRANSFER PROTEIN 8	coord: 1..119
None	No IPR available	CDD	cd01960	nsLTP1	coord: 30..117 e-value: 3.29418E-32 score: 107.05

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g003820.1	Lcy05g003820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding