Lcy05g002480 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g002480
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	nuclear pore complex protein NUP50A-like
Location	Chr05: 2207946 .. 2212838 (+)
RNA-Seq Expression	Lcy05g002480
Synteny	Lcy05g002480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGAACCAAACCAAAAACCCTCTCTCATATTTCAGTCTCTCCTTTTCTCTTTCCGAACCCTCATTTCTTTCTCATTTCTTCTACTTCCGATACAGCTTTGCTTGGATTCTCGGTAATTCCTGCTCCATTCACATTTTTATGTTTCGTTTCGAAGAGGAACGGGTTTAGATGTGTTAATTTATTCGATTTTCTTCTCTACTTTAAGTATGTATATGTTCTAATTTCAGTGGCTTGTGACTGTTTGTCTTTCTCTTCGTTGTCCTTTGAATCTTTGAGTTGTTTGTGTGTTTCGGTGTAGTGGATAGCTCGTTCTTTGTAATGATAGCTGGTGCCGATGTTGGTGAATCTTAATTTTAGTTCCGAATGGTACAGTTCAAGCCCTTGCACCCTATTTTGGGCTTTTGGGCACAAATTGTCGGAGAATATGCGATAGGAAGAACCAGAGAGTATAGGTAGATTTGATTCTGCTATAGAGAAAAAGGGAATAGAGAAAAAGGGAAAAGAGAAATTAACCCACAAATGTGAAGCTCAATTTCGAGTTTCCTTTCGTTCAATTATTTGTTGGCTTGAACTTTCTTGTGAGTCTTGTTAAGTCATTTGTTATCGATCTTTGTTTTATTTTTATATATTCCTTACCTCGAACAAGACAATTTAGTGATTTACTGGTTGGGTCTCTGTTATTCTTTTTTATTATTTTGGGTATTAAATAGAGGCCTTAATAAGCAATTAATGTTGTTGTGATGCATATCGAACTGCATGGTTCCTTTCAAAAGATTTGAAGGTTTAAGATCCAATCTCAAGAGTATCCTCGTAATCATTTCACTCCTGGGTCTAGTGAAGAGTATCACCTTTTAATTAATTGGTTGGCTGGGACAATCGTCTTGGAGATTGTGTATACAGTGGTTGGTGGCTAATGTAATAGTATTTTTCTCATCATATCTGCAGTTTGGAATGGATACCCTTCACTCTCTTTGGTTCTCACTTGTTCATTGTTTACTGACACTGACTGTTCACGTATGCATATTCAAAGTTCCTTGCCTGTTCCATTAAATTGCTGTAGTGCTTTATTGTGTGCTGTGTTATTTCTGGTTTCTTTTGACATATGATATGACTATCTGTTTCTTGTTACAGTTCTTATTTATGCTTTAATGGTTATCTCATTTCTGTGGTTGCAATGCATGTCAATATATTAAAAATTAAGTTTTAAGTGTTGGTTAAATACTTCAAGGTGATAACCGATTTTTTACATTTTTTATTTTCTTTCAAAACAATATCTTACACTTCATTCTATTTCATTATGCGTCTGTGAGGCAATGTGTTAGGGGTTTACAATGTTTTCAGACTTAGGTTAAAGACGTATCTAAAAGTTCATGGTGCATCTTTACCGACCTACCTGATCTTTAGCAGGATTTGGAGTTATATTCATCATTCAATCATGTCAAGAATGATGATTGAGATTGGTAAATTTAAAATGATAAATGCTTGGGAGTAGATGGTTTTGGGGGTAAAGTTACCCTATCTCAACTCATTACCATCTTTAATGTGTGCGTCAACCATTATCTGAAGATAGGGATAACAGTCTTTGAGTAGCCTCGTCTTGTGGTTGTGGTGCTATATGTTATCATGAGTTAGTTTTATGACAGGCTATGTCAACTGGGAGGCAAGTAGGGTTTGTGGCAGGTGGGAAATTGAGGAATTGAGGGAGAAAGAGAAGACATGGGGTGGGGGGGGGGGAGAAGAAATTAGGTGCATGTGGAGAGAGAGCTGTAGAGATGGTTTTCAAAAATGAAGATATCGAGGAGGGGGGGGGGGGGAGGATAGGGGAGAGATGATTCTTTTGGGGTTTAATTAATTTCAGTAAATTGATCAACAAAAAATATTGCCCCATAAACAATATGGAAAATGAAAAATTAAGGGTTGAATTATGCATCAACATAATTGTAATTATAAGATTATTGAATATCAAAATTCAGTTAATATTTCATATTAGCATATTTAACTGCCATATTATTTAAAGCCCAGAGATTGAGCTATTAGTTTTTCAAATCTAGAAATCCTAACTTGAATCTTAGGGATCAAGATGAAAATTTTGCTGATTATTGATGAATTAAAATTTATTTTATTATGGTTACTTGATTTTAAATAATTAAAGTTGATGAATAAATTCCAAAATAGAAATTCTAAGTTGTCAAACAAAGGCGAACATCTTCTATTCATGAGAACTTTTAGGAGCGATTCCATGTAAAAATCAAACACAGAAATTCTTTAATCACATATGTATATTTTATATCCAGATCCAGACAACCTATTCCTTGCATCTCATCTGAAACCAATGGCCTGTAAGAGGTTGCCTACTCTTATCTTGTCTAAAAAAAGAGAGTGTGTATTTGTAATCCTCATCTCTTAGTTGCTAGTGTTGTTGCTCTTATTGACTCCCTTCCTTTCTCTGGGATTTTCTTCTTTTAAATTTAATCTGTTTGTATTTGTAAGAAAGGTTCTTCCTTTGAACTTGTTGAGTAATAATGTTTGTACAATCTCCAGATATATATTTTCAGTTTCTGCTTTCTAGCGGAACTCCCAAGTTCTGGTTGATTTGCTTGACTCTTCAATGGGGGATGCTGAAAATGCAACATCTACAAAGAAGAGGGCTGCTGGAAGGGAGCTATCACGAGATAACCCTGGGCTTGATGACGAAGAAGATATTTCTGAGCAAGAGACTGGAACATTCAAGCGGGCTAGTGATGAGGTGCTAGCCACCCGAAGAATTGTCAAAGTACGTCGTGGTCAGACTGCCTCTGCCCCATCTTCTAATCCTTTTGCTGGAATACGCTTGGTACCTCCAACTGAAAATAGTGGAAGTGCTTCAGAAGTTAAAAGTGATGCACAGGCAGTTGGTGAAAAAACAGGTTCAGATGAGGCAAATGGAAAGGATGTTTCCCATGGAGAGACTAAAAAAGATGGAGATCATAATGACGAGCCAGCAGAACGTAAAATTGACACTTCAGAGGCTGAATCTGTTCCAAATGTGCAGAATGTTGATCAGAATAGCACTGTTGTAAGCGAATCTGCCATACCTAAGGTAGATGATATCCTAGTTGCTGAAAGTAACAAGATTGAAAATGAAGAACTAGCTGGAGAAGATAAGACTAAAAATGAGGAACTTGTAAGAGATGATAAGGCTGAGAATGATGAATGTGTAAGTGGCGGTAAGAATGAGAATGAGGATCCTGCAAGAGGCGATAAGAATGAAAATGAGGATCCTGCAAGAAGCGATAAGAATGAAAATGAAGAACCGAGTGAAGGAAATGAGATACAAAACAAGGAAACTGGGGATCAAGAAAAGACAGAAAATGAAGAAACAAAAGAAGACGGAAGTGAAGCAGAACCTGGTAAGGAGGCTGCTCCTCTGAGCTCATTCCAACAGCTATCAAGTAGCCAGAATGCCTTCACAGGTCTAGCCGGTACCGGATTTTCGACGTCTACGTTCTCCTTTGGTAATATACCCAAGGATGGGGTTGGCCTGACTGCTAGTTTTGGTCTCTCTAATAATGGTAGCTCAGCCCTCTTTGGTTCTTCAGGTTCTTCCATTGTTTCCAAGAGTGAGAAAAGTGGCTTTCCATCGATGCAAGAGGTTGCAGTTGAAACTGGTGAAGAAAATGAACGTGTGGTTTTCAATGCTGATTCTATATTGTTTGAGTTTATAGATGGATCTTGGAAAGAACGTGGAAAGGGGGAGCTGAAAGTTAATGTTCCTACAAGCGGGACTGGCAGACCGAGGATTCTTATGAGGGCCAGAGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGACATGAAGCTCACAAACATGGACAAGAAAGGTATCACCTTTGCCTGCGTGAACAGCACCAGCGAAGGGAAGGATGGTCTTTCAACATTTGCTTTGAAGTTCAAGGATGCTTCCATAGTGGAGGAGTTTCGAGCAGCAGTCACCGAGCATAAAGGTAAAGCTTCTACAGTTCTGAAAACGCCAGAGAATTCTCCTTAAGGACTCAGATACTTGAAAGTTATACTTGGTGAAGAATAGCTGCATGTTTTCTGCTCTGGAGTGTCTATCAGAGTTATCCTACAGCTCAAGTGAGTAGTTTTTTCGGTCCGGCATTTCGTAAGCCATAATGTAGCAGAGTCATAGAATCCTAAGCATTTTGTTGTAGTTTTATTTGTCATCATAGACTCTTTTTCTGTTCATATCTTGGGTGGAACATATCTTCAGACTGAATATGTTCCTAAACCATGGAATCCTTGGCAGAATCTCATAATTGTCCATTTAACTTTTGCGATATGAACCAGCTTTTGTGCCCTCTAGATTGAGTACTTTCTTACACAAACACATAGAAAGTCAAAAAGATAGAAATGGAAGATGCTACTCTTGTTGTTTGGATGTTGGATCATTCTGAATCTGTGATATCACAAGTATACTGTCTATAGAAAGCTGTGTGGTTGAAACAAGTTAAGGTGCTCTACACTGGTTTGCTGGTTTCATTTCTTTTTACTGATGGTATGCTGAAACAACTAGAAGAGCTTTTGTAGCTCCTTTCGGCCATTCATGTTATGAAGATCAGGAAAGTCTGTCGCCCTTGAATTAGCTGTTAAAAATCAATCTCAATACTTTGCATTTTGGGTGATTTGGTTCTAGTTATTTGTATGATTAAGCCAGGGTTTCCCTCGAAGAGGGTAATCACTTTTGTCATGCTTGGAAACGAATTCATTTTCAAACTTGCTCTAAATCTGTCGAGCCATCTGTTTTTCCATTTCTTGAATCGAAAGCATATAGTTATGTGAAACAAATACTTTTAAACGATCTTTTCATGAAAGTTTTGATCGAAATATCAAATGGGGAATTCTTT

mRNA sequence

GGGGAACCAAACCAAAAACCCTCTCTCATATTTCAGTCTCTCCTTTTCTCTTTCCGAACCCTCATTTCTTTCTCATTTCTTCTACTTCCGATACAGCTTTGCTTGGATTCTCGATATATATTTTCAGTTTCTGCTTTCTAGCGGAACTCCCAAGTTCTGGTTGATTTGCTTGACTCTTCAATGGGGGATGCTGAAAATGCAACATCTACAAAGAAGAGGGCTGCTGGAAGGGAGCTATCACGAGATAACCCTGGGCTTGATGACGAAGAAGATATTTCTGAGCAAGAGACTGGAACATTCAAGCGGGCTAGTGATGAGGTGCTAGCCACCCGAAGAATTGTCAAAGTACGTCGTGGTCAGACTGCCTCTGCCCCATCTTCTAATCCTTTTGCTGGAATACGCTTGGTACCTCCAACTGAAAATAGTGGAAGTGCTTCAGAAGTTAAAAGTGATGCACAGGCAGTTGGTGAAAAAACAGGTTCAGATGAGGCAAATGGAAAGGATGTTTCCCATGGAGAGACTAAAAAAGATGGAGATCATAATGACGAGCCAGCAGAACGTAAAATTGACACTTCAGAGGCTGAATCTGTTCCAAATGTGCAGAATGTTGATCAGAATAGCACTGTTGTAAGCGAATCTGCCATACCTAAGGTAGATGATATCCTAGTTGCTGAAAGTAACAAGATTGAAAATGAAGAACTAGCTGGAGAAGATAAGACTAAAAATGAGGAACTTGTAAGAGATGATAAGGCTGAGAATGATGAATGTGTAAGTGGCGGTAAGAATGAGAATGAGGATCCTGCAAGAGGCGATAAGAATGAAAATGAGGATCCTGCAAGAAGCGATAAGAATGAAAATGAAGAACCGAGTGAAGGAAATGAGATACAAAACAAGGAAACTGGGGATCAAGAAAAGACAGAAAATGAAGAAACAAAAGAAGACGGAAGTGAAGCAGAACCTGGTAAGGAGGCTGCTCCTCTGAGCTCATTCCAACAGCTATCAAGTAGCCAGAATGCCTTCACAGGTCTAGCCGGTACCGGATTTTCGACGTCTACGTTCTCCTTTGGTAATATACCCAAGGATGGGGTTGGCCTGACTGCTAGTTTTGGTCTCTCTAATAATGGTAGCTCAGCCCTCTTTGGTTCTTCAGGTTCTTCCATTGTTTCCAAGAGTGAGAAAAGTGGCTTTCCATCGATGCAAGAGGTTGCAGTTGAAACTGGTGAAGAAAATGAACGTGTGGTTTTCAATGCTGATTCTATATTGTTTGAGTTTATAGATGGATCTTGGAAAGAACGTGGAAAGGGGGAGCTGAAAGTTAATGTTCCTACAAGCGGGACTGGCAGACCGAGGATTCTTATGAGGGCCAGAGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGACATGAAGCTCACAAACATGGACAAGAAAGGTATCACCTTTGCCTGCGTGAACAGCACCAGCGAAGGGAAGGATGGTCTTTCAACATTTGCTTTGAAGTTCAAGGATGCTTCCATAGTGGAGGAGTTTCGAGCAGCAGTCACCGAGCATAAAGGTAAAGCTTCTACAGTTCTGAAAACGCCAGAGAATTCTCCTTAAGGACTCAGATACTTGAAAGTTATACTTGGTGAAGAATAGCTGCATGTTTTCTGCTCTGGAGTGTCTATCAGAGTTATCCTACAGCTCAAGTGAGTAGTTTTTTCGGTCCGGCATTTCGTAAGCCATAATGTAGCAGAGTCATAGAATCCTAAGCATTTTGTTGTAGTTTTATTTGTCATCATAGACTCTTTTTCTGTTCATATCTTGGGTGGAACATATCTTCAGACTGAATATGTTCCTAAACCATGGAATCCTTGGCAGAATCTCATAATTGTCCATTTAACTTTTGCGATATGAACCAGCTTTTGTGCCCTCTAGATTGAGTACTTTCTTACACAAACACATAGAAAGTCAAAAAGATAGAAATGGAAGATGCTACTCTTGTTGTTTGGATGTTGGATCATTCTGAATCTGTGATATCACAAGTATACTGTCTATAGAAAGCTGTGTGGTTGAAACAAGTTAAGGTGCTCTACACTGGTTTGCTGGTTTCATTTCTTTTTACTGATGGTATGCTGAAACAACTAGAAGAGCTTTTGTAGCTCCTTTCGGCCATTCATGTTATGAAGATCAGGAAAGTCTGTCGCCCTTGAATTAGCTGTTAAAAATCAATCTCAATACTTTGCATTTTGGGTGATTTGGTTCTAGTTATTTGTATGATTAAGCCAGGGTTTCCCTCGAAGAGGGTAATCACTTTTGTCATGCTTGGAAACGAATTCATTTTCAAACTTGCTCTAAATCTGTCGAGCCATCTGTTTTTCCATTTCTTGAATCGAAAGCATATAGTTATGTGAAACAAATACTTTTAAACGATCTTTTCATGAAAGTTTTGATCGAAATATCAAATGGGGAATTCTTT

Coding sequence (CDS)

ATGGGGGATGCTGAAAATGCAACATCTACAAAGAAGAGGGCTGCTGGAAGGGAGCTATCACGAGATAACCCTGGGCTTGATGACGAAGAAGATATTTCTGAGCAAGAGACTGGAACATTCAAGCGGGCTAGTGATGAGGTGCTAGCCACCCGAAGAATTGTCAAAGTACGTCGTGGTCAGACTGCCTCTGCCCCATCTTCTAATCCTTTTGCTGGAATACGCTTGGTACCTCCAACTGAAAATAGTGGAAGTGCTTCAGAAGTTAAAAGTGATGCACAGGCAGTTGGTGAAAAAACAGGTTCAGATGAGGCAAATGGAAAGGATGTTTCCCATGGAGAGACTAAAAAAGATGGAGATCATAATGACGAGCCAGCAGAACGTAAAATTGACACTTCAGAGGCTGAATCTGTTCCAAATGTGCAGAATGTTGATCAGAATAGCACTGTTGTAAGCGAATCTGCCATACCTAAGGTAGATGATATCCTAGTTGCTGAAAGTAACAAGATTGAAAATGAAGAACTAGCTGGAGAAGATAAGACTAAAAATGAGGAACTTGTAAGAGATGATAAGGCTGAGAATGATGAATGTGTAAGTGGCGGTAAGAATGAGAATGAGGATCCTGCAAGAGGCGATAAGAATGAAAATGAGGATCCTGCAAGAAGCGATAAGAATGAAAATGAAGAACCGAGTGAAGGAAATGAGATACAAAACAAGGAAACTGGGGATCAAGAAAAGACAGAAAATGAAGAAACAAAAGAAGACGGAAGTGAAGCAGAACCTGGTAAGGAGGCTGCTCCTCTGAGCTCATTCCAACAGCTATCAAGTAGCCAGAATGCCTTCACAGGTCTAGCCGGTACCGGATTTTCGACGTCTACGTTCTCCTTTGGTAATATACCCAAGGATGGGGTTGGCCTGACTGCTAGTTTTGGTCTCTCTAATAATGGTAGCTCAGCCCTCTTTGGTTCTTCAGGTTCTTCCATTGTTTCCAAGAGTGAGAAAAGTGGCTTTCCATCGATGCAAGAGGTTGCAGTTGAAACTGGTGAAGAAAATGAACGTGTGGTTTTCAATGCTGATTCTATATTGTTTGAGTTTATAGATGGATCTTGGAAAGAACGTGGAAAGGGGGAGCTGAAAGTTAATGTTCCTACAAGCGGGACTGGCAGACCGAGGATTCTTATGAGGGCCAGAGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGACATGAAGCTCACAAACATGGACAAGAAAGGTATCACCTTTGCCTGCGTGAACAGCACCAGCGAAGGGAAGGATGGTCTTTCAACATTTGCTTTGAAGTTCAAGGATGCTTCCATAGTGGAGGAGTTTCGAGCAGCAGTCACCGAGCATAAAGGTAAAGCTTCTACAGTTCTGAAAACGCCAGAGAATTCTCCTTAA

Protein sequence

MGDAENATSTKKRAAGRELSRDNPGLDDEEDISEQETGTFKRASDEVLATRRIVKVRRGQTASAPSSNPFAGIRLVPPTENSGSASEVKSDAQAVGEKTGSDEANGKDVSHGETKKDGDHNDEPAERKIDTSEAESVPNVQNVDQNSTVVSESAIPKVDDILVAESNKIENEELAGEDKTKNEELVRDDKAENDECVSGGKNENEDPARGDKNENEDPARSDKNENEEPSEGNEIQNKETGDQEKTENEETKEDGSEAEPGKEAAPLSSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTASFGLSNNGSSALFGSSGSSIVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEFIDGSWKERGKGELKVNVPTSGTGRPRILMRARGNYRLILNASLYPDMKLTNMDKKGITFACVNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKASTVLKTPENSP

Homology

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BLAST of Lcy05g002480 vs. ExPASy Swiss-Prot
Match: Q9C829 (Nuclear pore complex protein NUP50A OS=Arabidopsis thaliana OX=3702 GN=NUP50A PE=1 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 9.2e-89
Identity = 233/493 (47.26%), Postives = 306/493 (62.07%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGLDDEEDISEQETGTFKRASDEVLATRRIVKVRRG 60
           MGD+EN    +KKR A ++LSRDNPGLDD++D +E E+GTFK+ASDEVLA+RRIV+V+R 
Sbjct: 1   MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRK 60

Query: 61  QTASAP--SSNPFAGIRLVPPTENSGSASEVKSDAQAVGEKTGSDEANGKDVSHGETKKD 120
           + ++AP  +SNPFAGI+LVP T  + +++ V ++A     K    EA  +D    +   D
Sbjct: 61  EPSAAPVAASNPFAGIQLVPTT--APASTPVGTNAPLAESKLAPAEAVVED---NQKASD 120

Query: 121 GDHNDEPAERKIDTSEAESVPNVQNVDQNSTVVSESAIPKVDDILVAE----SNKIENEE 180
            +  DE   +K+D  +A      +  D++     +SA  +V    VA+       + N  
Sbjct: 121 IEEGDEVDSKKVDVKDAVGEETEKTKDKDDNHCGKSADVQVAATEVAQMVSCDTNVCNNA 180

Query: 181 LAGEDKTKNEELVRDDKAENDECVSGGKNENEDPARGDKNENEDPARSDKNENEEPSEGN 240
           + G D+T       D   E D   SGG                     D+ E +E  EGN
Sbjct: 181 VEGTDQT-------DFPLEKD---SGG---------------------DQAEKKE-KEGN 240

Query: 241 EIQNKETGDQEKTENEETKEDGSEAEPGKEAAPLSSFQQLSSSQNAFTGLAGTGFSTSTF 300
            I+                    EA+   +    SSFQQ SS++NAFTGLA T  S S+F
Sbjct: 241 GIE--------------------EADKNGDNGAFSSFQQHSSNKNAFTGLASTEASGSSF 300

Query: 301 SFGNIPKD---GVGLTASFGLSNNGSSALFGSSGSSIVSKSEKSGFPSMQEVAVETGEEN 360
           SFG + +D   G G    FGL ++ SS++FG++GSSI+ KSE SGFP  QEV+ ETGEEN
Sbjct: 301 SFGLVSQDGSTGTGSLFGFGLPSSNSSSIFGATGSSIIKKSEGSGFPPKQEVSTETGEEN 360

Query: 361 ERVVFNADSILFEFIDGSWKERGKGELKVNVPTSGTGRPRILMRARGNYRLILNASLYPD 420
           E+V F+ADSI+FE++DG WKERGKGELKVNV +S  G+ R++MRA+GNYRLILNASLYP+
Sbjct: 361 EKVAFSADSIMFEYLDGGWKERGKGELKVNV-SSNDGKARLVMRAKGNYRLILNASLYPE 420

Query: 421 MKLTNMDKKGITFACVNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKG--------- 475
           MKL NMDKKGITFACVNS SEGK+GLSTFALKFKD +IVEEFR A+ +HK          
Sbjct: 421 MKLANMDKKGITFACVNSVSEGKEGLSTFALKFKDPTIVEEFRVAIDKHKDSKPMEKAAE 435

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BLAST of Lcy05g002480 vs. ExPASy Swiss-Prot
Match: Q9LW88 (Nuclear pore complex protein NUP50B OS=Arabidopsis thaliana OX=3702 GN=NUP50B PE=1 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.3e-82
Identity = 223/497 (44.87%), Postives = 302/497 (60.76%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGL-DDEEDISEQETGTFKRASDEVLATRRIVKVRR 60
           MGD++NA   ++KR A +ELSRDNPGL DD+ED S  E+GTF  AS EVLA+RRI++VRR
Sbjct: 1   MGDSDNAIPFSRKRTALKELSRDNPGLDDDDEDTSALESGTFNTASKEVLASRRIIRVRR 60

Query: 61  -GQTASA-PSSNPFAGIRLVP---PTENSGSASEVKSDAQAVGEKTGSDEANGKDVSHGE 120
             ++A+A P+SNPF GIRLVP   P  ++ +A   K  +    E      ++    + G+
Sbjct: 61  TDRSATAPPASNPFTGIRLVPFTAPAPSTAAAETTKPLSAGKQETLADGRSDATKETDGD 120

Query: 121 TKKDGDHNDEPAERKIDTSEAESVPNVQNVDQNSTVVSESAIPKVDDILVAESNKIENEE 180
           +K+  D  D   +++    E  S      +D     +SE A+  V+       N+ E + 
Sbjct: 121 SKEKSDAIDAVGKQETQGDEI-SAKTKDIIDGGEKEMSE-AVNSVEGGGAVNKNEDEIKT 180

Query: 181 LAGEDKTKNEELVRDDKAENDECVSGGKNENEDPARGDKNENEDPARSDKNENEEPSEGN 240
               +    EE V+DD                                  N N    EG+
Sbjct: 181 TMVTEVAAGEETVKDD----------------------------------NNNSNTVEGS 240

Query: 241 EIQNKETGDQEKTENEETKEDGSE-AEPGKEAAPLSSFQQLSSSQNAFTGLAGTGFSTST 300
           +   K+TG  + TE E  + DG+E  E   ++  LSSF Q SSS+NAFTGLA TGFS S+
Sbjct: 241 DCVVKDTGGNQ-TEKEGKEGDGNEDTEKNGDSGALSSFHQHSSSKNAFTGLASTGFSASS 300

Query: 301 FSFGNIPKDG------VGLTASFGLSNNGSSALFGSS-GSSIVSKSEK--SGFPSMQEVA 360
           FSFG +P++G         + SFG +NNG+S+LFG+S  +SI +KS +  + FPS Q+V+
Sbjct: 301 FSFGLVPQEGSTGSGSEQSSFSFGQANNGNSSLFGASVATSITTKSTETTTAFPSKQDVS 360

Query: 361 VETGEENERVVFNADSILFEFIDGSWKERGKGELKVNVPTSGTGRPRILMRARGNYRLIL 420
           VETGEENE+  F ADS++FE+++G WKERGKGELKVN+ T+   + R++MR++GNYRL L
Sbjct: 361 VETGEENEKAAFTADSVMFEYLEGGWKERGKGELKVNISTTENRKARLVMRSKGNYRLTL 420

Query: 421 NASLYPDMKLTNMDKKGITFACVNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHK--- 475
           NASLYP+MKL  MDKKGITFACVNS S+ KDGLST ALKFKD ++VEEFRA + EHK   
Sbjct: 421 NASLYPEMKLAKMDKKGITFACVNSVSDAKDGLSTLALKFKDPTVVEEFRAVIEEHKDSK 460

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BLAST of Lcy05g002480 vs. ExPASy Swiss-Prot
Match: A0A0B4K7J2 (E3 SUMO-protein ligase RanBP2 OS=Drosophila melanogaster OX=7227 GN=Nup358 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.8e-12
Identity = 48/139 (34.53%), Postives = 74/139 (53.24%), Query Frame = 0


Query: 337  PSMQEVAVETGEENERVVFNADSILFEFIDGSWKERGKGELKVNVPTSGTGRPRILMRAR 396
            P   EV V TGEE E + F + + LF ++D  WKERG G +K+ +    TG  R+LMR  
Sbjct: 1315 PLPDEVEVRTGEEGEDIKFTSRAKLFRYVDKEWKERGTGVIKI-LCDKATGVSRVLMRRD 1374

Query: 397  GNYRLILNASLYPDMKLT----NMDKKGITFACVNSTSEGKDGLSTFALKFKDASIVEEF 456
              +++  N ++  D+ +     + DKK + +A  N  ++ +  L  F ++FK   + EEF
Sbjct: 1375 QTHKVCANHTITADITINVANQDKDKKSLLWA-ANDFADEQVTLERFLVRFKTGELAEEF 1434

Query: 457  RAAVTEHKGKASTVLKTPE 472
            R A T    KAS   K+ E
Sbjct: 1435 RVAFT----KASEAAKSKE 1447

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BLAST of Lcy05g002480 vs. ExPASy Swiss-Prot
Match: Q6PDH4 (Ran-binding protein 3-like OS=Mus musculus OX=10090 GN=Ranbp3l PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.6e-06
Identity = 41/137 (29.93%), Postives = 70/137 (51.09%), Query Frame = 0


Query: 311 LSNNGSSALFGSSGSSIVSKSEKSGFPSMQEVAVETGEENERVVFNADSILFEF--IDGS 370
           +SN+ S        S+    S+ S    ++++ V TGEE E  V   +  +F F     S
Sbjct: 281 VSNSDSIENISLVESAAAFSSKPSQKCLLEKIDVITGEETEHNVLKINCKIFVFNKATES 340

Query: 371 WKERGKGELKVNVPTS---GTGRPRILMRARGNYRLILNASLYPDMKLTNMDKKGITFAC 430
           W ERG+G L++N       GT + R++MR +G+ RL+LN+ L+  MK+    +K +    
Sbjct: 341 WSERGQGILRLNDTAGRECGTLQSRLIMRNQGSLRLVLNSRLWAQMKIQRASQKNLR--- 400

Query: 431 VNSTSEGKDGLSTFALK 443
           + +T    DG+  F ++
Sbjct: 401 ITATDLEDDGIKIFLIQ 414

[Close]

BLAST of Lcy05g002480 vs. ExPASy TrEMBL
Match: A0A6J1GQJ1 (nuclear pore complex protein NUP50B-like OS=Cucurbita moschata OX=3662 GN=LOC111456179 PE=4 SV=1)

HSP 1 Score: 762.3 bits (1967), Expect = 1.2e-216
Identity = 418/474 (88.19%), Postives = 443/474 (93.46%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDISEQETGTFKRASDEVLATRRIVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDEED+SEQE GTFKRAS+EVLATRRIVKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQEAGTFKRASEEVLATRRIVKVRRGQ 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSASEVKSDAQAVGEKTGSDEANGKDVSHGETKKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSASEVKSDAQA GEKTGSDEA  KDVSH + +KDG H
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSASEVKSDAQAAGEKTGSDEAKQKDVSHEKIQKDG-H 120

Query: 121 NDEPAERKIDTSEAESVPNVQNVDQNSTVVSESAIPKVDDILVAESNKIENEELAGEDKT 180
           +DEPAE K+DTSEAESVPNVQNVDQNSTV SESAI ++DD  V E NKIENE  AGEDK 
Sbjct: 121 SDEPAECKLDTSEAESVPNVQNVDQNSTVASESAISELDDKQVTERNKIENEIPAGEDKN 180

Query: 181 KNEELVRDDKAENDECVSGGKNENEDPARGDKNENEDPARSDKNENEEPSEGNEIQNKET 240
            NEELVRD+KAENDECVSGGKN+N DPA+G+KNENEDPAR  KNENEEPSEGNEIQNKET
Sbjct: 181 GNEELVRDEKAENDECVSGGKNDNGDPAKGEKNENEDPARDAKNENEEPSEGNEIQNKET 240

Query: 241 GDQEKTENEETKEDGSEAEPGKEAAPLSSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPK 300
           GDQEKTENEE KE+GSE +P K+A PLSSFQQLSSSQNAFTGLAGTG +TSTFSFGNIPK
Sbjct: 241 GDQEKTENEENKENGSETDPSKKAGPLSSFQQLSSSQNAFTGLAGTGLTTSTFSFGNIPK 300

Query: 301 DGVGLTASFGLSNNGSSALFGSSGSSIVSKSEKSGFPSMQEVAVETGEENERVVFNADSI 360
           DGVGLTASFGLS NGSSALFG+SGSSIVSKSEKSGFPSMQEVAVETGEENE+VVF+ADSI
Sbjct: 301 DGVGLTASFGLSTNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFSADSI 360

Query: 361 LFEFIDGSWKERGKGELKVNVPTSGTGRPRILMRARGNYRLILNASLYPDMKLTNMDKKG 420
           +FEFIDGSWKERGKGELKVNVPTSGTGR RILMRARGNYRLILNASLYPDMKLTNMDK+G
Sbjct: 361 MFEFIDGSWKERGKGELKVNVPTSGTGRARILMRARGNYRLILNASLYPDMKLTNMDKRG 420

Query: 421 ITFACVNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKASTVLKTPENSP 475
           ITFAC+NS SEGKDGLST+ LKF+D SIVEEFRAA+TEHKGKASTVLKTPENSP
Sbjct: 421 ITFACMNSASEGKDGLSTYGLKFRDVSIVEEFRAAITEHKGKASTVLKTPENSP 473

[Close]

BLAST of Lcy05g002480 vs. ExPASy TrEMBL
Match: A0A6J1JV59 (nuclear pore complex protein NUP50B-like OS=Cucurbita maxima OX=3661 GN=LOC111488624 PE=4 SV=1)

HSP 1 Score: 750.4 bits (1936), Expect = 4.7e-213
Identity = 415/477 (87.00%), Postives = 440/477 (92.24%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDISEQETGTFKRASDEVLATRRIVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDEED+SEQE GTFKRAS+EVLATRRIVKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQEAGTFKRASEEVLATRRIVKVRRGQ 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSASEVKSDAQAVGEKTGSDEANGKDVSHGETKKDGDH 120
           TASAPSSNPFAGIRLVPPTEN+GSASEVKSDAQA GEKTGS+EA  KDVSH + +KDG H
Sbjct: 61  TASAPSSNPFAGIRLVPPTENNGSASEVKSDAQAAGEKTGSNEAKQKDVSHEKFQKDG-H 120

Query: 121 NDEPAERKIDTSEAESVPNVQNVDQNSTVVSESAIPKVDDILVAESNKIENEELAGEDKT 180
           +DEPAE K+DTSEAESVPNVQNVDQNSTV SESAI ++DD  V E NKIENE  AGEDK 
Sbjct: 121 SDEPAECKLDTSEAESVPNVQNVDQNSTVASESAISELDDKQVTERNKIENEVPAGEDKN 180

Query: 181 KNEELVRDDKAENDECVSGGKNENEDPARGDKNENEDPARSDKNENEEPSEGNEIQNKET 240
            NEELVRD+KAENDECVSGGKN+N DPA+G+KNENEDPAR  KNENEEP EGNEIQNKET
Sbjct: 181 GNEELVRDEKAENDECVSGGKNDNGDPAKGEKNENEDPARDAKNENEEPIEGNEIQNKET 240

Query: 241 GDQEKTENE---ETKEDGSEAEPGKEAAPLSSFQQLSSSQNAFTGLAGTGFSTSTFSFGN 300
           GDQEK ENE   E KE+GSE +P K+A PLSSFQQLSSSQNAFTGLAGTG  TSTFSFGN
Sbjct: 241 GDQEKIENEENKENKENGSETDPSKKAGPLSSFQQLSSSQNAFTGLAGTGLPTSTFSFGN 300

Query: 301 IPKDGVGLTASFGLSNNGSSALFGSSGSSIVSKSEKSGFPSMQEVAVETGEENERVVFNA 360
           IPKDGVGLTASFGLS NGSSALFG+SGSSIVSKSEKSGFPSMQEVAVETGEENE+VVFNA
Sbjct: 301 IPKDGVGLTASFGLSTNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNA 360

Query: 361 DSILFEFIDGSWKERGKGELKVNVPTSGTGRPRILMRARGNYRLILNASLYPDMKLTNMD 420
           DSI+FEFIDGSWKERGKGELKVNVPTSGTGR RILMRARGNYRLILNASLYPDMKLTNMD
Sbjct: 361 DSIMFEFIDGSWKERGKGELKVNVPTSGTGRARILMRARGNYRLILNASLYPDMKLTNMD 420

Query: 421 KKGITFACVNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKASTVLKTPENSP 475
           K+GITFAC+NS SEGKDGLST+ LKF+D SIVEEFRAA+TEHKGKASTVLKTPENSP
Sbjct: 421 KRGITFACMNSASEGKDGLSTYGLKFRDVSIVEEFRAAITEHKGKASTVLKTPENSP 476

[Close]

BLAST of Lcy05g002480 vs. ExPASy TrEMBL
Match: A0A6J1KFN4 (nuclear pore complex protein NUP50A-like OS=Cucurbita maxima OX=3661 GN=LOC111494613 PE=4 SV=1)

HSP 1 Score: 731.1 bits (1886), Expect = 3.0e-207
Identity = 414/475 (87.16%), Postives = 432/475 (90.95%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDISEQETGTFKRASDEVLATRRIVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDE+D+SEQ TGTFKRASDEVLA RRIVKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRIVKVRRGQ 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSASEVKSDAQAVGEKTGSDEANGKDVSHGETKKDGDH 120
           TAS PSSNPFAGIRLVPPT+NSGSASE KS+AQAVGEKTGSDEANGKDVSH E KKDGDH
Sbjct: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSNAQAVGEKTGSDEANGKDVSH-EEKKDGDH 120

Query: 121 NDEPAERKIDTSEAESVPNVQNVDQNSTVVSESAIPKVDDILVAESNKIENEELAGEDKT 180
           NDEPAE KIDTSEAES  NVQNVDQNST+VSESAIPKVDD LVAESNKIENE  AGEDKT
Sbjct: 121 NDEPAEHKIDTSEAESGTNVQNVDQNSTIVSESAIPKVDDNLVAESNKIENEVQAGEDKT 180

Query: 181 KNEELVRDDKAENDECVSGGKNENEDPARGDKNENEDPARSDKNENEEPSEGNEIQNKET 240
           KNEEL+  + AEND CVSGGKNENEDPA+G           ++NENEEP EGNEIQNKET
Sbjct: 181 KNEELIGGENAENDACVSGGKNENEDPAQG-----------NENENEEPCEGNEIQNKET 240

Query: 241 GDQEKTENEETKEDGSEAEPGKEAAPLSSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPK 300
           GDQEK ENEE KE GSEA+  KEA+PLSSFQQLSSSQNAFTGLAGTGFST+TFSFGNI K
Sbjct: 241 GDQEKVENEEKKEVGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNILK 300

Query: 301 DGVGLTASFGLSNNGSSALFGSSGSSIVSKSEKSGFPSMQEVAVETGEENERVVFNADSI 360
           DG GL++SFGLSNNGSSALF +  SS VSKSEKSGFPSMQEVAVETGEENERVVFNADSI
Sbjct: 301 DGAGLSSSFGLSNNGSSALFNT--SSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSI 360

Query: 361 LFEFIDGSWKERGKGELKVNVPTSGTGRPRILMRARGNYRLILNASLYPDMKLTNMDKKG 420
           LFEF+DGSWKERGKGELKVNVPT GTGR RILMRARGNYRLILNASLYPDMKLTNMDKKG
Sbjct: 361 LFEFLDGSWKERGKGELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKG 420

Query: 421 ITFACVNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKA-STVLKTPENSP 475
           ITFAC+NSTSE KDGLSTFALKFKDASIVEEFRAAVTEHKGKA STVLKTPENSP
Sbjct: 421 ITFACMNSTSEVKDGLSTFALKFKDASIVEEFRAAVTEHKGKASSTVLKTPENSP 461

[Close]

BLAST of Lcy05g002480 vs. ExPASy TrEMBL
Match: A0A6J1HNF6 (nuclear pore complex protein NUP50A-like OS=Cucurbita moschata OX=3662 GN=LOC111464517 PE=4 SV=1)

HSP 1 Score: 730.7 bits (1885), Expect = 3.9e-207
Identity = 413/475 (86.95%), Postives = 431/475 (90.74%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDISEQETGTFKRASDEVLATRRIVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDE+D+SEQ TGTFKRASDEVLA RRIVKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEDDVSEQATGTFKRASDEVLAGRRIVKVRRGQ 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSASEVKSDAQAVGEKTGSDEANGKDVSHGETKKDGDH 120
           TAS PSSNPFAGIRLVPPT+NSGSASE KS AQAVGEKTGSDEANGKDVSH E KKDGDH
Sbjct: 61  TASTPSSNPFAGIRLVPPTDNSGSASEGKSTAQAVGEKTGSDEANGKDVSH-EEKKDGDH 120

Query: 121 NDEPAERKIDTSEAESVPNVQNVDQNSTVVSESAIPKVDDILVAESNKIENEELAGEDKT 180
           NDEPAE KIDTSEAES  NVQNVDQNST VSESAIPKVDD LVAESNKIENE  AGEDKT
Sbjct: 121 NDEPAEHKIDTSEAESGTNVQNVDQNSTDVSESAIPKVDDNLVAESNKIENEVQAGEDKT 180

Query: 181 KNEELVRDDKAENDECVSGGKNENEDPARGDKNENEDPARSDKNENEEPSEGNEIQNKET 240
           KNEEL+  D AEND CVSGGKNENEDPARG           ++NENEEP EGNE+ NKET
Sbjct: 181 KNEELIGGDNAENDACVSGGKNENEDPARG-----------NENENEEPCEGNEMPNKET 240

Query: 241 GDQEKTENEETKEDGSEAEPGKEAAPLSSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPK 300
           GDQEK E+EE KE+GSEA+  KEA+PLSSFQQLSSSQNAFTGLAGTGFST+TFSFGN+ K
Sbjct: 241 GDQEKVEHEEKKEEGSEADTSKEASPLSSFQQLSSSQNAFTGLAGTGFSTTTFSFGNVLK 300

Query: 301 DGVGLTASFGLSNNGSSALFGSSGSSIVSKSEKSGFPSMQEVAVETGEENERVVFNADSI 360
           DG GL++SFGLSNNGSSALF +  SS VSKSEKSGFPSMQEVAVETGEENERVVFNADSI
Sbjct: 301 DGAGLSSSFGLSNNGSSALFNT--SSTVSKSEKSGFPSMQEVAVETGEENERVVFNADSI 360

Query: 361 LFEFIDGSWKERGKGELKVNVPTSGTGRPRILMRARGNYRLILNASLYPDMKLTNMDKKG 420
           LFEF+DGSWKERGKGELKVNVPT GTGR RILMRARGNYRLILNASLYPDMKLTNMDKKG
Sbjct: 361 LFEFLDGSWKERGKGELKVNVPTIGTGRARILMRARGNYRLILNASLYPDMKLTNMDKKG 420

Query: 421 ITFACVNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKA-STVLKTPENSP 475
           ITFAC+NSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKA STVLKTPENSP
Sbjct: 421 ITFACMNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKASSTVLKTPENSP 461

[Close]

BLAST of Lcy05g002480 vs. ExPASy TrEMBL
Match: A0A1S4E3Q0 (nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500566 PE=4 SV=1)

HSP 1 Score: 718.0 bits (1852), Expect = 2.6e-203
Identity = 404/477 (84.70%), Postives = 428/477 (89.73%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDISEQETGTFKRASDEVLATRRIVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPG DD+ED+SEQETGTFKRAS+EVLATRRIVKVRRG 
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSASEVKSDAQAVGEKTGSDEANGKDVSHGETKKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGS +EV+ D +A  EK GSDEANGKD+ H  T+KDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 NDEPAERKIDTSEAESVPNVQNVDQNSTVVSESAIPKVDDILVAESNKIENEELAGEDKT 180
           +DEP + KIDTSEA+SVP VQ VDQNSTV+SESAI KVDD LV ESNKIENEE AG DKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 KNEELVRD--DKAENDECVSGGKNENEDPARGDKNENEDPARSDKNENEEPSEGNEIQNK 240
            NEELVRD   ++ENDECVS            DKNE+E PAR DKNENEEPSEGNEIQNK
Sbjct: 181 GNEELVRDAEKESENDECVS-----------CDKNEDEVPARGDKNENEEPSEGNEIQNK 240

Query: 241 ETGDQEKTENEETKEDGSEAEPGKEAAPLSSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300
           ETG+QEKTENEE KED SE EP KEAAPL+SFQQLSSSQNAFTGLAGTGFSTSTFSFGNI
Sbjct: 241 ETGEQEKTENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300

Query: 301 PKDGVGLTASFGLSNNGSSALFGSSGSSIVSKSEKSGFPSMQEVAVETGEENERVVFNAD 360
           PKDGVGLT SFGLSNNGSSALFG+SGSS VSKSE+SGFPSMQEVAVETGEENE+VVFNAD
Sbjct: 301 PKDGVGLTTSFGLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNAD 360

Query: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRPRILMRARGNYRLILNASLYPDMKLTNMDK 420
           SILFEFIDGSWKERGKGELKVNVPTSGTGR RILMRARGNYRLILNASLYPDMKLTNMDK
Sbjct: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDK 420

Query: 421 KGITFACVNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKA-STVLKTPENSP 475
           +GITFAC+NST +GKDGLSTF +KFKD SIVEEFRAAVTEHKGKA STVLKTPENSP
Sbjct: 421 RGITFACMNSTIDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466

[Close]

BLAST of Lcy05g002480 vs. NCBI nr
Match: XP_038898125.1 (nuclear pore complex protein NUP50A-like [Benincasa hispida])

HSP 1 Score: 765.0 bits (1974), Expect = 3.8e-217
Identity = 427/477 (89.52%), Postives = 443/477 (92.87%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDISEQETGTFKRASDEVLATRRIVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDEED+SEQETGTFKRAS+EVLATRRIVKVRRG 
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRGP 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSASEVKSDAQAVGEKTGSDEANGKDVSHGETKKDGDH 120
           TASAPSSNPFAGIRLVPPTE+SGS +EVKSD Q  GEK  SDEANGKDVS+  T+KDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTESSGSTAEVKSDTQEAGEKASSDEANGKDVSNEATQKDGDH 120

Query: 121 NDEPAERKIDTSEAESVPNVQNVDQNSTVVSESAIPKVDDILVAESNKIENEELAGEDKT 180
           +DEPAE K DTSEAESVPNVQNVDQNSTVVSESAI KVDD  VAESNKIENEE AG DKT
Sbjct: 121 SDEPAECKFDTSEAESVPNVQNVDQNSTVVSESAISKVDDNEVAESNKIENEEPAGGDKT 180

Query: 181 KNEELVRD--DKAENDECVSGGKNENEDPARGDKNENEDPARSDKNENEEPSEGNEIQNK 240
            NEE+VRD   +AENDECVSGGKNENEDPARGDKNENED AR DKNENEEPS GNEI+NK
Sbjct: 181 GNEEVVRDAEKEAENDECVSGGKNENEDPARGDKNENEDLARGDKNENEEPSAGNEIENK 240

Query: 241 ETGDQEKTENEETKEDGSEAEPGKEAAPLSSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300
           ETG+QEKTENE  KE  SEAEP KEAAPLSSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI
Sbjct: 241 ETGEQEKTENEANKEGKSEAEPSKEAAPLSSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300

Query: 301 PKDGVGLTASFGLSNNGSSALFGSSGSSIVSKSEKSGFPSMQEVAVETGEENERVVFNAD 360
           PKDG GLT SFGLSNNGSSALFG+SGSSIVSKSEKSGFPSMQEVAVETGEENE+VVFNAD
Sbjct: 301 PKDGAGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNAD 360

Query: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRPRILMRARGNYRLILNASLYPDMKLTNMDK 420
           SILFEFIDGSWKERGKGELKVNVPTSGTGR RILMRARGNYRLILNASLYPDMKLTNMDK
Sbjct: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRARILMRARGNYRLILNASLYPDMKLTNMDK 420

Query: 421 KGITFACVNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGK-ASTVLKTPENSP 475
           +GITFAC+NSTSEGKDGLSTF +KFKD SIVEEFRAAVTEHKGK ASTVLKTPENSP
Sbjct: 421 RGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKAASTVLKTPENSP 477

[Close]

BLAST of Lcy05g002480 vs. NCBI nr
Match: XP_023548163.1 (nuclear pore complex protein NUP50B-like [Cucurbita pepo subsp. pepo] >XP_023548164.1 nuclear pore complex protein NUP50B-like [Cucurbita pepo subsp. pepo] >XP_023548165.1 nuclear pore complex protein NUP50B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 763.5 bits (1970), Expect = 1.1e-216
Identity = 418/474 (88.19%), Postives = 443/474 (93.46%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDISEQETGTFKRASDEVLATRRIVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDEED+SEQETGTFKRAS+EVLATRRIVKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRGQ 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSASEVKSDAQAVGEKTGSDEANGKDVSHGETKKDGDH 120
            ASAPSSNPFAGIRLVPPTENSGSASEVKSDAQA GEKTGSDEAN KDVSH + +KDG H
Sbjct: 61  AASAPSSNPFAGIRLVPPTENSGSASEVKSDAQAAGEKTGSDEANQKDVSHEKIQKDG-H 120

Query: 121 NDEPAERKIDTSEAESVPNVQNVDQNSTVVSESAIPKVDDILVAESNKIENEELAGEDKT 180
           +DEPAE K+DTSEAESVPNV +VDQNSTV SESAI ++DD  V E NKIENE  AGEDK 
Sbjct: 121 SDEPAECKLDTSEAESVPNVHHVDQNSTVASESAISELDDKQVTERNKIENEVRAGEDKN 180

Query: 181 KNEELVRDDKAENDECVSGGKNENEDPARGDKNENEDPARSDKNENEEPSEGNEIQNKET 240
            NEELVRD+KAENDECVSGGKN+N DPA+G+KNENEDPAR  KNENEEPSEGNEIQNKET
Sbjct: 181 GNEELVRDEKAENDECVSGGKNDNGDPAKGEKNENEDPARDAKNENEEPSEGNEIQNKET 240

Query: 241 GDQEKTENEETKEDGSEAEPGKEAAPLSSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPK 300
           GDQEKTENEE KE+GSE +P K+A PLSSFQQLSSSQNAFTGLAGTG +TSTFSFGNIPK
Sbjct: 241 GDQEKTENEENKENGSETDPSKKAGPLSSFQQLSSSQNAFTGLAGTGLTTSTFSFGNIPK 300

Query: 301 DGVGLTASFGLSNNGSSALFGSSGSSIVSKSEKSGFPSMQEVAVETGEENERVVFNADSI 360
           DGVGLTASFGLS NGSSALFG+SGSSIVSKSEKSGFPSMQEVAVETGEENE+VVFNADSI
Sbjct: 301 DGVGLTASFGLSTNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSI 360

Query: 361 LFEFIDGSWKERGKGELKVNVPTSGTGRPRILMRARGNYRLILNASLYPDMKLTNMDKKG 420
           +FEFIDGSWKERGKGELKVNVPTSGTGR RILMRARGNYRLILNASLYPDMKLTNMDK+G
Sbjct: 361 MFEFIDGSWKERGKGELKVNVPTSGTGRARILMRARGNYRLILNASLYPDMKLTNMDKRG 420

Query: 421 ITFACVNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKASTVLKTPENSP 475
           ITFAC+NS SEGKDGLST+ LKF+D SIVEEFRAA+TEHKGKASTVLKTPENSP
Sbjct: 421 ITFACMNSASEGKDGLSTYGLKFRDVSIVEEFRAAITEHKGKASTVLKTPENSP 473

[Close]

BLAST of Lcy05g002480 vs. NCBI nr
Match: XP_022953734.1 (nuclear pore complex protein NUP50B-like [Cucurbita moschata])

HSP 1 Score: 762.3 bits (1967), Expect = 2.5e-216
Identity = 418/474 (88.19%), Postives = 443/474 (93.46%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDISEQETGTFKRASDEVLATRRIVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDEED+SEQE GTFKRAS+EVLATRRIVKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQEAGTFKRASEEVLATRRIVKVRRGQ 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSASEVKSDAQAVGEKTGSDEANGKDVSHGETKKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSASEVKSDAQA GEKTGSDEA  KDVSH + +KDG H
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSASEVKSDAQAAGEKTGSDEAKQKDVSHEKIQKDG-H 120

Query: 121 NDEPAERKIDTSEAESVPNVQNVDQNSTVVSESAIPKVDDILVAESNKIENEELAGEDKT 180
           +DEPAE K+DTSEAESVPNVQNVDQNSTV SESAI ++DD  V E NKIENE  AGEDK 
Sbjct: 121 SDEPAECKLDTSEAESVPNVQNVDQNSTVASESAISELDDKQVTERNKIENEIPAGEDKN 180

Query: 181 KNEELVRDDKAENDECVSGGKNENEDPARGDKNENEDPARSDKNENEEPSEGNEIQNKET 240
            NEELVRD+KAENDECVSGGKN+N DPA+G+KNENEDPAR  KNENEEPSEGNEIQNKET
Sbjct: 181 GNEELVRDEKAENDECVSGGKNDNGDPAKGEKNENEDPARDAKNENEEPSEGNEIQNKET 240

Query: 241 GDQEKTENEETKEDGSEAEPGKEAAPLSSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPK 300
           GDQEKTENEE KE+GSE +P K+A PLSSFQQLSSSQNAFTGLAGTG +TSTFSFGNIPK
Sbjct: 241 GDQEKTENEENKENGSETDPSKKAGPLSSFQQLSSSQNAFTGLAGTGLTTSTFSFGNIPK 300

Query: 301 DGVGLTASFGLSNNGSSALFGSSGSSIVSKSEKSGFPSMQEVAVETGEENERVVFNADSI 360
           DGVGLTASFGLS NGSSALFG+SGSSIVSKSEKSGFPSMQEVAVETGEENE+VVF+ADSI
Sbjct: 301 DGVGLTASFGLSTNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFSADSI 360

Query: 361 LFEFIDGSWKERGKGELKVNVPTSGTGRPRILMRARGNYRLILNASLYPDMKLTNMDKKG 420
           +FEFIDGSWKERGKGELKVNVPTSGTGR RILMRARGNYRLILNASLYPDMKLTNMDK+G
Sbjct: 361 MFEFIDGSWKERGKGELKVNVPTSGTGRARILMRARGNYRLILNASLYPDMKLTNMDKRG 420

Query: 421 ITFACVNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKASTVLKTPENSP 475
           ITFAC+NS SEGKDGLST+ LKF+D SIVEEFRAA+TEHKGKASTVLKTPENSP
Sbjct: 421 ITFACMNSASEGKDGLSTYGLKFRDVSIVEEFRAAITEHKGKASTVLKTPENSP 473

[Close]

BLAST of Lcy05g002480 vs. NCBI nr
Match: KAG7014097.1 (Nuclear pore complex protein NUP50A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 754.2 bits (1946), Expect = 6.7e-214
Identity = 415/474 (87.55%), Postives = 440/474 (92.83%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDISEQETGTFKRASDEVLATRRIVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDEED+SEQE GTFKRAS+EVLATRRIVKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQEAGTFKRASEEVLATRRIVKVRRGQ 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSASEVKSDAQAVGEKTGSDEANGKDVSHGETKKDGDH 120
           TASA SSNPFAGIRLVPPTENSGSASEVKSDA+A GEKTGSDEA  KDVSH + +KDG H
Sbjct: 61  TASALSSNPFAGIRLVPPTENSGSASEVKSDAKAAGEKTGSDEAKQKDVSHEKIQKDG-H 120

Query: 121 NDEPAERKIDTSEAESVPNVQNVDQNSTVVSESAIPKVDDILVAESNKIENEELAGEDKT 180
           +DEPAE K+DTSEAESVPNVQNVDQNSTV SESAI ++DD  V E NKIENE  AGEDK 
Sbjct: 121 SDEPAECKLDTSEAESVPNVQNVDQNSTVASESAISELDDKQVTERNKIENEVPAGEDKN 180

Query: 181 KNEELVRDDKAENDECVSGGKNENEDPARGDKNENEDPARSDKNENEEPSEGNEIQNKET 240
            NEELVRD+KAENDECVSGGKN+N DPA+G+KNENEDPAR  KNENEEPSEGNEIQNKET
Sbjct: 181 GNEELVRDEKAENDECVSGGKNDNGDPAKGEKNENEDPARDAKNENEEPSEGNEIQNKET 240

Query: 241 GDQEKTENEETKEDGSEAEPGKEAAPLSSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPK 300
           GDQEKTENEE KE+GSE +P K+A PLSSFQQLSSSQNAFTGLAGTG +TSTFSFGNIPK
Sbjct: 241 GDQEKTENEENKENGSETDPSKKAGPLSSFQQLSSSQNAFTGLAGTGLTTSTFSFGNIPK 300

Query: 301 DGVGLTASFGLSNNGSSALFGSSGSSIVSKSEKSGFPSMQEVAVETGEENERVVFNADSI 360
           DGVGLTASFGLS NGSSALFG+SGSS VSKSEKSGFPSMQEVAVETGEENE+VVFNADSI
Sbjct: 301 DGVGLTASFGLSTNGSSALFGTSGSSTVSKSEKSGFPSMQEVAVETGEENEKVVFNADSI 360

Query: 361 LFEFIDGSWKERGKGELKVNVPTSGTGRPRILMRARGNYRLILNASLYPDMKLTNMDKKG 420
           +FEFIDGSWKERGKGELKVNV TSGTGR RILMRARGNYRLILNASLYPDMKLTNMDK+G
Sbjct: 361 MFEFIDGSWKERGKGELKVNVSTSGTGRARILMRARGNYRLILNASLYPDMKLTNMDKRG 420

Query: 421 ITFACVNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKASTVLKTPENSP 475
           ITFAC+NS SEGKDGLST+ LKF+D SIVEEFRAA+TEHKGKASTVLKTPENSP
Sbjct: 421 ITFACMNSASEGKDGLSTYGLKFRDVSIVEEFRAAITEHKGKASTVLKTPENSP 473

[Close]

BLAST of Lcy05g002480 vs. NCBI nr
Match: KAG6575551.1 (Nuclear pore complex protein NUP50B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 753.1 bits (1943), Expect = 1.5e-213
Identity = 415/474 (87.55%), Postives = 439/474 (92.62%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDISEQETGTFKRASDEVLATRRIVKVRRGQ 60
           MGDAENATSTKKRAAGRELSRDNPGLDDEED+SEQE GTFKRAS+EVLATRRIVKVRRGQ
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQEAGTFKRASEEVLATRRIVKVRRGQ 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSASEVKSDAQAVGEKTGSDEANGKDVSHGETKKDGDH 120
           TASA SSNPFAGIRLVPPTENSGSASEVKSDA+A GEKTGSDEA  KDVSH + +KDG H
Sbjct: 61  TASALSSNPFAGIRLVPPTENSGSASEVKSDAKAAGEKTGSDEAKQKDVSHEKIQKDG-H 120

Query: 121 NDEPAERKIDTSEAESVPNVQNVDQNSTVVSESAIPKVDDILVAESNKIENEELAGEDKT 180
           +DEPAE K+DTSEAESVPNVQNVDQNSTV SESAI ++DD  V E NKIENE  AGEDK 
Sbjct: 121 SDEPAECKLDTSEAESVPNVQNVDQNSTVASESAISELDDKQVTERNKIENEVPAGEDKN 180

Query: 181 KNEELVRDDKAENDECVSGGKNENEDPARGDKNENEDPARSDKNENEEPSEGNEIQNKET 240
            NEELVRD KAENDECVSGGKN+N DPA+G+KNENEDPAR  KNENEEPSEGNEIQNKET
Sbjct: 181 GNEELVRDGKAENDECVSGGKNDNGDPAKGEKNENEDPARDAKNENEEPSEGNEIQNKET 240

Query: 241 GDQEKTENEETKEDGSEAEPGKEAAPLSSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPK 300
           GDQEKTENEE KE+GSE +P K+A PLSSFQQLSSSQNAFTGLAGTG +TSTFSFGNIPK
Sbjct: 241 GDQEKTENEENKENGSETDPSKKAGPLSSFQQLSSSQNAFTGLAGTGLTTSTFSFGNIPK 300

Query: 301 DGVGLTASFGLSNNGSSALFGSSGSSIVSKSEKSGFPSMQEVAVETGEENERVVFNADSI 360
           DGVGLTASFGLS NGSSALFG+SGSS VSKSEKSGFPSMQEVAVETGEENE+VVFNADSI
Sbjct: 301 DGVGLTASFGLSTNGSSALFGTSGSSTVSKSEKSGFPSMQEVAVETGEENEKVVFNADSI 360

Query: 361 LFEFIDGSWKERGKGELKVNVPTSGTGRPRILMRARGNYRLILNASLYPDMKLTNMDKKG 420
           +FEFIDGSWKERGKGELKVNV TSGTGR RILMRARGNYRLILNASLYPDMKLTNMDK+G
Sbjct: 361 MFEFIDGSWKERGKGELKVNVSTSGTGRARILMRARGNYRLILNASLYPDMKLTNMDKRG 420

Query: 421 ITFACVNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKGKASTVLKTPENSP 475
           ITFAC+NS SEGKDGLST+ LKF+D SIVEEFRAA+TEHKGKASTVLKTPENSP
Sbjct: 421 ITFACMNSASEGKDGLSTYGLKFRDVSIVEEFRAAITEHKGKASTVLKTPENSP 473

[Close]

BLAST of Lcy05g002480 vs. TAIR 10
Match: AT1G52380.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 328.9 bits (842), Expect = 6.5e-90
Identity = 233/493 (47.26%), Postives = 306/493 (62.07%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGLDDEEDISEQETGTFKRASDEVLATRRIVKVRRG 60
           MGD+EN    +KKR A ++LSRDNPGLDD++D +E E+GTFK+ASDEVLA+RRIV+V+R 
Sbjct: 1   MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRK 60

Query: 61  QTASAP--SSNPFAGIRLVPPTENSGSASEVKSDAQAVGEKTGSDEANGKDVSHGETKKD 120
           + ++AP  +SNPFAGI+LVP T  + +++ V ++A     K    EA  +D    +   D
Sbjct: 61  EPSAAPVAASNPFAGIQLVPTT--APASTPVGTNAPLAESKLAPAEAVVED---NQKASD 120

Query: 121 GDHNDEPAERKIDTSEAESVPNVQNVDQNSTVVSESAIPKVDDILVAE----SNKIENEE 180
            +  DE   +K+D  +A      +  D++     +SA  +V    VA+       + N  
Sbjct: 121 IEEGDEVDSKKVDVKDAVGEETEKTKDKDDNHCGKSADVQVAATEVAQMVSCDTNVCNNA 180

Query: 181 LAGEDKTKNEELVRDDKAENDECVSGGKNENEDPARGDKNENEDPARSDKNENEEPSEGN 240
           + G D+T       D   E D   SGG                     D+ E +E  EGN
Sbjct: 181 VEGTDQT-------DFPLEKD---SGG---------------------DQAEKKE-KEGN 240

Query: 241 EIQNKETGDQEKTENEETKEDGSEAEPGKEAAPLSSFQQLSSSQNAFTGLAGTGFSTSTF 300
            I+                    EA+   +    SSFQQ SS++NAFTGLA T  S S+F
Sbjct: 241 GIE--------------------EADKNGDNGAFSSFQQHSSNKNAFTGLASTEASGSSF 300

Query: 301 SFGNIPKD---GVGLTASFGLSNNGSSALFGSSGSSIVSKSEKSGFPSMQEVAVETGEEN 360
           SFG + +D   G G    FGL ++ SS++FG++GSSI+ KSE SGFP  QEV+ ETGEEN
Sbjct: 301 SFGLVSQDGSTGTGSLFGFGLPSSNSSSIFGATGSSIIKKSEGSGFPPKQEVSTETGEEN 360

Query: 361 ERVVFNADSILFEFIDGSWKERGKGELKVNVPTSGTGRPRILMRARGNYRLILNASLYPD 420
           E+V F+ADSI+FE++DG WKERGKGELKVNV +S  G+ R++MRA+GNYRLILNASLYP+
Sbjct: 361 EKVAFSADSIMFEYLDGGWKERGKGELKVNV-SSNDGKARLVMRAKGNYRLILNASLYPE 420

Query: 421 MKLTNMDKKGITFACVNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHKG--------- 475
           MKL NMDKKGITFACVNS SEGK+GLSTFALKFKD +IVEEFR A+ +HK          
Sbjct: 421 MKLANMDKKGITFACVNSVSEGKEGLSTFALKFKDPTIVEEFRVAIDKHKDSKPMEKAAE 435

[Close]

BLAST of Lcy05g002480 vs. TAIR 10
Match: AT3G15970.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 308.5 bits (789), Expect = 9.1e-84
Identity = 223/497 (44.87%), Postives = 302/497 (60.76%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGL-DDEEDISEQETGTFKRASDEVLATRRIVKVRR 60
           MGD++NA   ++KR A +ELSRDNPGL DD+ED S  E+GTF  AS EVLA+RRI++VRR
Sbjct: 1   MGDSDNAIPFSRKRTALKELSRDNPGLDDDDEDTSALESGTFNTASKEVLASRRIIRVRR 60

Query: 61  -GQTASA-PSSNPFAGIRLVP---PTENSGSASEVKSDAQAVGEKTGSDEANGKDVSHGE 120
             ++A+A P+SNPF GIRLVP   P  ++ +A   K  +    E      ++    + G+
Sbjct: 61  TDRSATAPPASNPFTGIRLVPFTAPAPSTAAAETTKPLSAGKQETLADGRSDATKETDGD 120

Query: 121 TKKDGDHNDEPAERKIDTSEAESVPNVQNVDQNSTVVSESAIPKVDDILVAESNKIENEE 180
           +K+  D  D   +++    E  S      +D     +SE A+  V+       N+ E + 
Sbjct: 121 SKEKSDAIDAVGKQETQGDEI-SAKTKDIIDGGEKEMSE-AVNSVEGGGAVNKNEDEIKT 180

Query: 181 LAGEDKTKNEELVRDDKAENDECVSGGKNENEDPARGDKNENEDPARSDKNENEEPSEGN 240
               +    EE V+DD                                  N N    EG+
Sbjct: 181 TMVTEVAAGEETVKDD----------------------------------NNNSNTVEGS 240

Query: 241 EIQNKETGDQEKTENEETKEDGSE-AEPGKEAAPLSSFQQLSSSQNAFTGLAGTGFSTST 300
           +   K+TG  + TE E  + DG+E  E   ++  LSSF Q SSS+NAFTGLA TGFS S+
Sbjct: 241 DCVVKDTGGNQ-TEKEGKEGDGNEDTEKNGDSGALSSFHQHSSSKNAFTGLASTGFSASS 300

Query: 301 FSFGNIPKDG------VGLTASFGLSNNGSSALFGSS-GSSIVSKSEK--SGFPSMQEVA 360
           FSFG +P++G         + SFG +NNG+S+LFG+S  +SI +KS +  + FPS Q+V+
Sbjct: 301 FSFGLVPQEGSTGSGSEQSSFSFGQANNGNSSLFGASVATSITTKSTETTTAFPSKQDVS 360

Query: 361 VETGEENERVVFNADSILFEFIDGSWKERGKGELKVNVPTSGTGRPRILMRARGNYRLIL 420
           VETGEENE+  F ADS++FE+++G WKERGKGELKVN+ T+   + R++MR++GNYRL L
Sbjct: 361 VETGEENEKAAFTADSVMFEYLEGGWKERGKGELKVNISTTENRKARLVMRSKGNYRLTL 420

Query: 421 NASLYPDMKLTNMDKKGITFACVNSTSEGKDGLSTFALKFKDASIVEEFRAAVTEHK--- 475
           NASLYP+MKL  MDKKGITFACVNS S+ KDGLST ALKFKD ++VEEFRA + EHK   
Sbjct: 421 NASLYPEMKLAKMDKKGITFACVNSVSDAKDGLSTLALKFKDPTVVEEFRAVIEEHKDSK 460

The following BLAST results are available for this feature:

BLAST of Lcy05g002480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C829	9.2e-89	47.26	Nuclear pore complex protein NUP50A OS=Arabidopsis thaliana OX=3702 GN=NUP50A PE...	[more]
Q9LW88	1.3e-82	44.87	Nuclear pore complex protein NUP50B OS=Arabidopsis thaliana OX=3702 GN=NUP50B PE...	[more]
A0A0B4K7J2	1.8e-12	34.53	E3 SUMO-protein ligase RanBP2 OS=Drosophila melanogaster OX=7227 GN=Nup358 PE=1 ...	[more]
Q6PDH4	2.6e-06	29.93	Ran-binding protein 3-like OS=Mus musculus OX=10090 GN=Ranbp3l PE=1 SV=1	[more]

BLAST of Lcy05g002480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQJ1	1.2e-216	88.19	nuclear pore complex protein NUP50B-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JV59	4.7e-213	87.00	nuclear pore complex protein NUP50B-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1KFN4	3.0e-207	87.16	nuclear pore complex protein NUP50A-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1HNF6	3.9e-207	86.95	nuclear pore complex protein NUP50A-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A1S4E3Q0	2.6e-203	84.70	nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Lcy05g002480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898125.1	3.8e-217	89.52	nuclear pore complex protein NUP50A-like [Benincasa hispida]	[more]
XP_023548163.1	1.1e-216	88.19	nuclear pore complex protein NUP50B-like [Cucurbita pepo subsp. pepo] >XP_023548...	[more]
XP_022953734.1	2.5e-216	88.19	nuclear pore complex protein NUP50B-like [Cucurbita moschata]	[more]
KAG7014097.1	6.7e-214	87.55	Nuclear pore complex protein NUP50A, partial [Cucurbita argyrosperma subsp. argy...	[more]
KAG6575551.1	1.5e-213	87.55	Nuclear pore complex protein NUP50B, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of Lcy05g002480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52380.1	6.5e-90	47.26	NUP50 (Nucleoporin 50 kDa) protein	[more]
AT3G15970.1	9.1e-84	44.87	NUP50 (Nucleoporin 50 kDa) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 333..459 e-value: 1.0E-16 score: 71.5
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 344..459 e-value: 4.8E-17 score: 62.3
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 336..465 score: 18.246458
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 268..460 e-value: 6.6E-36 score: 125.9
IPR015007	Nuclear pore complex, NUP2/50/61	PFAM	PF08911	NUP50	coord: 12..73 e-value: 3.0E-15 score: 56.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..153
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 1..474
None	No IPR available	PANTHER	PTHR23138:SF142	NUCLEAR PORE COMPLEX PROTEIN NUP50A-RELATED	coord: 1..474
None	No IPR available	CDD	cd13169	RanBD_NUP50_plant	coord: 346..463 e-value: 1.02382E-65 score: 205.376
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 336..461

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g002480.1	Lcy05g002480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
biological_process	GO:0051028	mRNA transport
biological_process	GO:0015031	protein transport
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0005096	GTPase activator activity