Lcy05g002270 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g002270
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibosomal protein L37
LocationChr05: 2046359 .. 2047732 (-)
RNA-Seq ExpressionLcy05g002270
SyntenyLcy05g002270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAACTGCAGATAGAATTTCTCCTCCCTAGGGTTTCTTCGTCCTGCATCAATGGTACCTCTCTTTGCCTTTCATCGCTGTCTCGATTTATGCTTCTGTGTAGTTGTATTCAACTTCGTGTTCTTGCTTGCTTAATCTACAGGGAAAGGGTACGGGCAGTTTTGGTAAGAGGAGGAACAAGACCCATACTCTCTGCGTGCGGTGCGGCCGCCGCAGCTTCCATCTCCAGAAGAGCCGCTGTGCAGCATGTGCTTTCCCTGCTGCTCGCCTGCGCAAATGTAAGTGCTCACGATCTTTCACTCTTTTTGACTCTGCCCCTTTTATTTACTTCGATCTGAATAGAATCTTTCGGCTTGTGTTTGTTTTGATTCCATGGGTTGCTGCGTTGCATTTATTTTGTTACAATTCGTATCTCTAGTAGTTTATAGTTAGTATTGGGTATTGACCCTGCATAAGAAGGCTAAAGTCTGCGCGATTGTGAATGAGATTCGTTTGTTGGGAGTAATGTGAGATGTTTGAATTGATTTTGTTGTTCCACGGAGTTTGGATTGATTTTGACTGTTTCCCATTTGTTTGCTGGCTTTGGGATTTATTTTTAGATAACTGGAGCGTGAAGGCAATTAGGAGAAAGACAACCGGAACTGGAAGGATGAGGTACTTGCGCCATGTTCCGCGTAGATTCAAGAGCGGCTTCAGAGAGGGTATGATATTGTATTTGTAGTTTATTTAACTCTTTGCACCATTTACTTCATGTGCACTAGGTTTCAATACTATAGTTAATTCAACTCTTACAAAAAAGTGTTTTGGACTTGTCTTTAGGTACTCAAGCTGCACCCAGGAATAAAGGAGCTGCAGCATCAGCATAAGGTTTTGGAAGAAGTTCGAGTTAATTTCAGTACCCAACTATAGTTTTCAGTAGGGTTTTTACTCATCTGAGAATCATTTCATATAATTTTGTTTTCTAGTTTTGCCTTTTCATGATTTAGTTGAACGTGGTTTTCATTAAAATGTATTGTTTTGAATTATGGACAAATGACGAATCAGATTGTTCGTACTCTTCTACTTTGCTTATGCTTTTTCCAGCGTGTTCGTTCTATTTTCCTCCATCCTCCCAAGGTTGCATGTGTTTTGGGAATACCCGATTGAACTGGAAAATTTGGAAATAGGTCTTAATCTTAGCCAGGAGTGGTATTAGCAACTTTTTGTGCTGCTCCCCATCCAAGCAAACGATATGACTCATTGTCCAGTAGGAGAATCTGTTTTCTCACAATTTCCCTGCTTGAAAGGATTAATTTGCTTTCAATTTTCTCACCAATATCCCTGTTGCCACCGACATTATTTTCTTCTCATCCTCGTGCCGCCTTAATTTGTAAG

mRNA sequence

CCAAACTGCAGATAGAATTTCTCCTCCCTAGGGTTTCTTCGTCCTGCATCAATGGGAAAGGGTACGGGCAGTTTTGGTAAGAGGAGGAACAAGACCCATACTCTCTGCGTGCGGTGCGGCCGCCGCAGCTTCCATCTCCAGAAGAGCCGCTGTGCAGCATGTGCTTTCCCTGCTGCTCGCCTGCGCAAATATAACTGGAGCGTGAAGGCAATTAGGAGAAAGACAACCGGAACTGGAAGGATGAGGTACTTGCGCCATGTTCCGCGTAGATTCAAGAGCGGCTTCAGAGAGGGTACTCAAGCTGCACCCAGGAATAAAGGAGCTGCAGCATCAGCATAAGGTTTTGGAAGAAGTTCGAGTTAATTTCAGTACCCAACTATAGTTTTCAGTAGGGTTTTTACTCATCTGAGAATCATTTCATATAATTTTGTTTTCTAGTTTTGCCTTTTCATGATTTAGTTGAACGTGGTTTTCATTAAAATGTATTGTTTTGAATTATGGACAAATGACGAATCAGATTGTTCGTACTCTTCTACTTTGCTTATGCTTTTTCCAGCGTGTTCGTTCTATTTTCCTCCATCCTCCCAAGGTTGCATGTGTTTTGGGAATACCCGATTGAACTGGAAAATTTGGAAATAGGTCTTAATCTTAGCCAGGAGTGGTATTAGCAACTTTTTGTGCTGCTCCCCATCCAAGCAAACGATATGACTCATTGTCCAGTAGGAGAATCTGTTTTCTCACAATTTCCCTGCTTGAAAGGATTAATTTGCTTTCAATTTTCTCACCAATATCCCTGTTGCCACCGACATTATTTTCTTCTCATCCTCGTGCCGCCTTAATTTGTAAG

Coding sequence (CDS)

ATGGGAAAGGGTACGGGCAGTTTTGGTAAGAGGAGGAACAAGACCCATACTCTCTGCGTGCGGTGCGGCCGCCGCAGCTTCCATCTCCAGAAGAGCCGCTGTGCAGCATGTGCTTTCCCTGCTGCTCGCCTGCGCAAATATAACTGGAGCGTGAAGGCAATTAGGAGAAAGACAACCGGAACTGGAAGGATGAGGTACTTGCGCCATGTTCCGCGTAGATTCAAGAGCGGCTTCAGAGAGGGTACTCAAGCTGCACCCAGGAATAAAGGAGCTGCAGCATCAGCATAA

Protein sequence

MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
Homology
[Close]
BLAST of Lcy05g002270 vs. ExPASy Swiss-Prot
Match: Q43292 (60S ribosomal protein L37-2 OS=Arabidopsis thaliana OX=3702 GN=RPL37B PE=3 SV=2)

HSP 1 Score: 170.2 bits (430), Expect = 1.1e-41
Identity = 82/95 (86.32%), Postives = 90/95 (94.74%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          M KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAAR R YNWSVKAIRRKTTG
Sbjct: 1  MTKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMRYLR+VPRRFK+GFREGT+A PRNKG A+SA
Sbjct: 61 TGRMRYLRNVPRRFKTGFREGTEAKPRNKGVASSA 95

[Close]
BLAST of Lcy05g002270 vs. ExPASy Swiss-Prot
Match: Q8LFH7 (60S ribosomal protein L37-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.9e-41
Identity = 82/95 (86.32%), Postives = 90/95 (94.74%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAAR R YNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMRYLR+VPRRFK+ FREGTQA PRNK AA+S+
Sbjct: 61 TGRMRYLRNVPRRFKTCFREGTQATPRNKAAASSS 95

[Close]
BLAST of Lcy05g002270 vs. ExPASy Swiss-Prot
Match: Q8LEM8 (60S ribosomal protein L37-3 OS=Arabidopsis thaliana OX=3702 GN=RPL37C PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.9e-41
Identity = 81/95 (85.26%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAAR R YNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMRYLR+VPRRFK+GFREGT+A PR+K +A+SA
Sbjct: 61 TGRMRYLRNVPRRFKTGFREGTEAKPRSKASASSA 95

[Close]
BLAST of Lcy05g002270 vs. ExPASy Swiss-Prot
Match: Q9VXX8 (Probable 60S ribosomal protein L37-A OS=Drosophila melanogaster OX=7227 GN=RpL37a PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 6.6e-31
Identity = 65/92 (70.65%), Postives = 76/92 (82.61%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          M KGT SFGKR NKTHTLC RCGR S+H+QKS CA C +PAA+LR YNWSVKA RRKTTG
Sbjct: 1  MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWSVKAKRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAA 93
          TGRM++L+ V RRF++GFREGTQA P+   A+
Sbjct: 61 TGRMQHLKVVRRRFRNGFREGTQAKPKKAVAS 92

[Close]
BLAST of Lcy05g002270 vs. ExPASy Swiss-Prot
Match: Q90YT1 (60S ribosomal protein L37 OS=Ictalurus punctatus OX=7998 GN=rpl37 PE=3 SV=3)

HSP 1 Score: 128.6 bits (322), Expect = 3.6e-29
Identity = 63/95 (66.32%), Postives = 73/95 (76.84%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          M KGT SFGKRRNKTHTLC RCG +++HLQKS C  C +PA R RKYNWS KA RR TTG
Sbjct: 1  MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRSTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMR+++ V RRF++GFREGT   PR    AAS+
Sbjct: 61 TGRMRHMKVVFRRFRNGFREGTVPKPRRAAVAASS 95

[Close]
BLAST of Lcy05g002270 vs. ExPASy TrEMBL
Match: A0A5D3BYC5 (Ribosomal protein L37 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002270 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.1e-44
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAAR RKYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMRYLRHVPRRFKSGFREGT+AAPRNKGAAASA
Sbjct: 61 TGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95

[Close]
BLAST of Lcy05g002270 vs. ExPASy TrEMBL
Match: A0A0A0K941 (Ribosomal protein L37 OS=Cucumis sativus OX=3659 GN=Csa_7G446890 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.1e-44
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAAR RKYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMRYLRHVPRRFKSGFREGT+AAPRNKGAAASA
Sbjct: 61 TGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95

[Close]
BLAST of Lcy05g002270 vs. ExPASy TrEMBL
Match: A0A1S3CGU0 (Ribosomal protein L37 OS=Cucumis melo OX=3656 GN=LOC103500584 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.1e-44
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAAR RKYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMRYLRHVPRRFKSGFREGT+AAPRNKGAAASA
Sbjct: 61 TGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95

[Close]
BLAST of Lcy05g002270 vs. ExPASy TrEMBL
Match: A0A371H269 (Ribosomal protein L37 OS=Mucuna pruriens OX=157652 GN=RPL37C PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.2e-44
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAAR RKYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMRYLRHVPRRFKSGFREGT+AAPR KGAAASA
Sbjct: 61 TGRMRYLRHVPRRFKSGFREGTEAAPRKKGAAASA 95

[Close]
BLAST of Lcy05g002270 vs. ExPASy TrEMBL
Match: A0A6J1HHN6 (Ribosomal protein L37 OS=Cucurbita moschata OX=3662 GN=LOC111464162 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.2e-44
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAAR RKYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMRY+RHVPRRFKSGFREGT+AAPRNKGAAASA
Sbjct: 61 TGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA 95

[Close]
BLAST of Lcy05g002270 vs. NCBI nr
Match: XP_004141772.1 (60S ribosomal protein L37-3 [Cucumis sativus] >XP_008462159.1 PREDICTED: 60S ribosomal protein L37-3-like [Cucumis melo] >XP_038896143.1 60S ribosomal protein L37-3-like [Benincasa hispida] >KAA0059300.1 60S ribosomal protein L37-3 [Cucumis melo var. makuwa] >KGN45374.1 hypothetical protein Csa_016423 [Cucumis sativus] >TYK04028.1 60S ribosomal protein L37-3 [Cucumis melo var. makuwa])

HSP 1 Score: 188.7 bits (478), Expect = 2.3e-44
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAAR RKYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARKRKYNWSVKAIRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMRYLRHVPRRFKSGFREGT+AAPRNKGAAASA
Sbjct: 61 TGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAASA 95

[Close]
BLAST of Lcy05g002270 vs. NCBI nr
Match: RDX96890.1 (60S ribosomal protein L37-3 [Mucuna pruriens])

HSP 1 Score: 186.8 bits (473), Expect = 8.6e-44
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAAR RKYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMRYLRHVPRRFKSGFREGT+AAPR KGAAASA
Sbjct: 61 TGRMRYLRHVPRRFKSGFREGTEAAPRKKGAAASA 95

[Close]
BLAST of Lcy05g002270 vs. NCBI nr
Match: XP_022964011.1 (60S ribosomal protein L37-3-like [Cucurbita moschata] >XP_023513643.1 60S ribosomal protein L37-3-like [Cucurbita pepo subsp. pepo] >KAG6593459.1 60S ribosomal protein L37-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.8 bits (473), Expect = 8.6e-44
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAAR RKYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMRY+RHVPRRFKSGFREGT+AAPRNKGAAASA
Sbjct: 61 TGRMRYMRHVPRRFKSGFREGTEAAPRNKGAAASA 95

[Close]
BLAST of Lcy05g002270 vs. NCBI nr
Match: XP_019436434.1 (PREDICTED: 60S ribosomal protein L37-3-like [Lupinus angustifolius] >OIW15861.1 hypothetical protein TanjilG_04396 [Lupinus angustifolius])

HSP 1 Score: 186.4 bits (472), Expect = 1.1e-43
Identity = 90/95 (94.74%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACA+PAAR+RKYNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSVKAIRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMRYLRHVPRRFKSGFREGT+AAPRNKGAAA+A
Sbjct: 61 TGRMRYLRHVPRRFKSGFREGTEAAPRNKGAAATA 95

[Close]
BLAST of Lcy05g002270 vs. NCBI nr
Match: XP_031252760.1 (60S ribosomal protein L37-3 [Pistacia vera] >KAF3450755.1 hypothetical protein FNV43_RR06844 [Rhamnella rubrinervis])

HSP 1 Score: 186.4 bits (472), Expect = 1.1e-43
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRC+ACAFPAAR R YNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA
Sbjct: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 95

[Close]
BLAST of Lcy05g002270 vs. TAIR 10
Match: AT1G52300.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 170.2 bits (430), Expect = 7.8e-43
Identity = 82/95 (86.32%), Postives = 90/95 (94.74%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          M KGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAAR R YNWSVKAIRRKTTG
Sbjct: 1  MTKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMRYLR+VPRRFK+GFREGT+A PRNKG A+SA
Sbjct: 61 TGRMRYLRNVPRRFKTGFREGTEAKPRNKGVASSA 95

[Close]
BLAST of Lcy05g002270 vs. TAIR 10
Match: AT1G15250.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-42
Identity = 82/95 (86.32%), Postives = 90/95 (94.74%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAAR R YNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMRYLR+VPRRFK+ FREGTQA PRNK AA+S+
Sbjct: 61 TGRMRYLRNVPRRFKTCFREGTQATPRNKAAASSS 95

[Close]
BLAST of Lcy05g002270 vs. TAIR 10
Match: AT3G16080.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-42
Identity = 81/95 (85.26%), Postives = 91/95 (95.79%), Query Frame = 0 

Query: 1  MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARLRKYNWSVKAIRRKTTG 60
          MGKGTGSFGKRRNK+HTLCVRCGRRSFH+QKSRC+ACA+PAAR R YNWSVKAIRRKTTG
Sbjct: 1  MGKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60

Query: 61 TGRMRYLRHVPRRFKSGFREGTQAAPRNKGAAASA 96
          TGRMRYLR+VPRRFK+GFREGT+A PR+K +A+SA
Sbjct: 61 TGRMRYLRNVPRRFKTGFREGTEAKPRSKASASSA 95

The following BLAST results are available for this feature:
BLAST of Lcy05g002270 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q432921.1e-4186.3260S ribosomal protein L37-2 OS=Arabidopsis thaliana OX=3702 GN=RPL37B PE=3 SV=2[more]
Q8LFH71.9e-4186.3260S ribosomal protein L37-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37A PE=3 SV=1[more]
Q8LEM81.9e-4185.2660S ribosomal protein L37-3 OS=Arabidopsis thaliana OX=3702 GN=RPL37C PE=3 SV=1[more]
Q9VXX86.6e-3170.65Probable 60S ribosomal protein L37-A OS=Drosophila melanogaster OX=7227 GN=RpL37... [more]
Q90YT13.6e-2966.3260S ribosomal protein L37 OS=Ictalurus punctatus OX=7998 GN=rpl37 PE=3 SV=3[more]
BLAST of Lcy05g002270 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BYC51.1e-4497.89Ribosomal protein L37 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold34... [more]
A0A0A0K9411.1e-4497.89Ribosomal protein L37 OS=Cucumis sativus OX=3659 GN=Csa_7G446890 PE=3 SV=1[more]
A0A1S3CGU01.1e-4497.89Ribosomal protein L37 OS=Cucumis melo OX=3656 GN=LOC103500584 PE=3 SV=1[more]
A0A371H2694.2e-4496.84Ribosomal protein L37 OS=Mucuna pruriens OX=157652 GN=RPL37C PE=3 SV=1[more]
A0A6J1HHN64.2e-4495.79Ribosomal protein L37 OS=Cucurbita moschata OX=3662 GN=LOC111464162 PE=3 SV=1[more]
BLAST of Lcy05g002270 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004141772.12.3e-4497.8960S ribosomal protein L37-3 [Cucumis sativus] >XP_008462159.1 PREDICTED: 60S rib... [more]
RDX96890.18.6e-4496.8460S ribosomal protein L37-3 [Mucuna pruriens][more]
XP_022964011.18.6e-4495.7960S ribosomal protein L37-3-like [Cucurbita moschata] >XP_023513643.1 60S riboso... [more]
XP_019436434.11.1e-4394.74PREDICTED: 60S ribosomal protein L37-3-like [Lupinus angustifolius] >OIW15861.1 ... [more]
XP_031252760.11.1e-4396.8460S ribosomal protein L37-3 [Pistacia vera] >KAF3450755.1 hypothetical protein F... [more]
BLAST of Lcy05g002270 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G52300.17.8e-4386.32Zinc-binding ribosomal protein family protein [more]
AT1G15250.11.3e-4286.32Zinc-binding ribosomal protein family protein [more]
AT3G16080.11.3e-4285.26Zinc-binding ribosomal protein family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001569Ribosomal protein L37ePFAMPF01907Ribosomal_L37ecoord: 3..53
e-value: 1.5E-26
score: 92.3
IPR001569Ribosomal protein L37eHAMAPMF_00547Ribosomal_L37ecoord: 2..53
score: 16.523008
IPR011331Ribosomal protein L37ae/L37eGENE3D2.20.25.30coord: 1..87
e-value: 1.2E-46
score: 158.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..95
NoneNo IPR availablePANTHERPTHR1076860S RIBOSOMAL PROTEIN L37coord: 1..95
NoneNo IPR availablePANTHERPTHR10768:SF28RIBOSOMAL PROTEIN L37coord: 1..95
IPR018267Ribosomal protein L37e, conserved sitePROSITEPS01077RIBOSOMAL_L37Ecoord: 4..23
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 1..55

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g002270.1Lcy05g002270.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0046872 metal ion binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome