Lcy05g001730 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCTACCTTCTTCCCAAATCTTATGGATCTATCGGGTCTTTGTAGGGAAAATAACAATTTGGACGAATGGTGGGATGAAATCACAAGACAATTCAGTAGAGAAGAGTCAGAGAAGATTGTGATTATCCTATGGATAATTTGGAACTATATAAACAAAGTCACAATCGACAAGGCAAATGCAGATAATAACCTTCTTGTGCGGTGGATTAAAAGGAACTTTGAAGCGTAGAGAAAACGTACCTCCCATCATCAGATGGATTTTAGGCTGGAGAGCCTTCGGAAACATGAAAAGTGGACCCCCCTCCGAACTGCTTGAAATTAAACTTGGATGCCTCCTAGAATGAAGAATTATCGACATGGGGCGTGGGCTGGATAATCCGTGATTCTTCGGGATCTTTAGTTGAAGCTGGATGCAAACAAATCAAACGACGGTGGACCATTAAAACTCTGGAAATCTTAGCGATCAAGGAGGGTTTGAAGGCATACCTAGCGCAAAAGCGAAATCAGAGTGTCCATTTGATCGTGGAGGCGGATGTCCTCAAAGTTATCCGTGCGTTGAACTACGAAATCGCCGACATTTCCGAAAGCAAAATCGTGATGAACGAGGTGGAGGTTTTGGCGGCTGAAGCGAGCGTGATCTCTTTCATCAAATGCCCTAGAGTAGGGAATCAAATTGCACGAGCAGCGGCAGGTTTTTCGTCGGTGTTCTCTCTGTCATCGACATGTTTTTTGAATCGCCCCCATCTTCCATGCTGGAAGACATTTTTTTTTTAGGAAGATCATCTTCCTTTTTGGTTATTCTCTTTATTAGAAGAGGAGTTAGGTGTAACGAACGTTTTGCTGGCTTAATGAATTTATTCAGTTTTTTTTTTAAAAAAAAAAACACACACGCAAGCATGTCGCAGTGCTATTTTCTAGAAGGGATGATGATCACTCAAGACGTTTGTTTTACTAATGCAATAAAAAAAAAATCCTATCTTCTTACTCAATGTTTTAATCTGATTATATTCAAGCTTAAAAAAGTTTCATGACACAAAATTTTATGAAACATGTTCTATTATGACCACATCTTTCTCCACTTGTTAGCTCTCATTGATGTTGACATGCAACTAGCTAGCTAGCCCAATTATCACATTGACCAAATCTTTTGTAGCAACATCTTTCTAAAGATCAAGAATATTTGTCCATTCTTTAAAAAAAAAAAAAGGAATATTTGTCCATTTTAAGTTACCATTCACAAACCTAAGCTTTATTTAGTTACTTAAACAATAATTTTACACAAAAAAAAAAAGAAAAAAAAAAAACTACCTATTAAGATAATTATATTCATGATTGATTGACATATATTCTATTTTTGTCATAGGCTATTATTTTGCTATATTTACAATCAACCCACACTTTTTAAACACATATTCCCAAAATAAATCATTTGATATAGATTTCTTCAAAACCATTCTCATATCAAAAGAAGGAACACACACTTTTTGAGAAGAAATAAATCATTTATATTCCAAAAATATAGTTATCAATATTCCTTTTATGAGACTCTATGTAATGACACACAAAACACGATTTTGATAAAATTGGAATAATGTAAGAAACATCAAAATCAAGATCCCCACATCATATATTACTATTAATTTGACACAAACAAACATTTTTTTCACAATAGAAATTAAAAAAAAAAATAGTTCAGTATCTATCTATTTATTTCTCATTTTAACGTTGTTGTCTATCATCAATGTGACTATAATCTCCTCCATTCAAAATTTGAAAAACCAAAATCTTATAAGAATGTCACCACTGATTTTCAGCACTATCATTTTTCATTCCAAAATTAGACTACAGAGCTTTGACTTGAATAAGAACAATACCAATAAAATAAAATATTTTAATATTTGTCTCTAAAACATGTCTTATTTTAGTTCCAATACATTCAAATATTCAAATTTAACATATTTATTATTAATAAATCTTCAAATCAGTCAATCGTTTTATTTTTTTTTTCAAATTGGTATTAATATTTTATCAAATATTAATTTCAAAATTGTTTGTTTTTTTTTTTTTTTTTAAGAGTTTCAGATAATTGGAAAAAAAAAACCCAAATGAATACGGAATTTAAAATCCCAAAAAACTGGCAATACCCTATTCTTTTTAAGCTGTGTCTTTAGTTGAATCAGTACATTTTGGATTGCGATTTATTAGACTTGTTTTAGAAAGATCCCTTTCCTTTGTGAAATGGGTTCTCTTTTATTTTGGCAGTGAAAATACACAGAGCCCAGTTTTCATTGATGGAAATTTTCTCTGAAAACTCTGTTTCTGTTTCTGTTTATTGATTTTCACAGCCAAAAGAAGAAGCCAAAATCTGAGCTTTTTGGAGAGACAAACTGAAGCTACGAACCATAGCTCTGTTTCTCTAAACGGAATGCTATCTCCCATTGCCATCGCCATTGGCAGCCATTGTTGA ATGAATGAAGAATTATCGACATGGGGCGTGGGCTGGATAATCCGTGATTCTTCGGGATCTTTAGTTGAAGCTGGATGCAAACAAATCAAACGACGGTGGACCATTAAAACTCTGGAAATCTTAGCGATCAAGGAGGGTTTGAAGGCATACCTAGCGCAAAAGCGAAATCAGAGTGTCCATTTGATCGTGGAGGCGGATGTCCTCAAAGTTATCCGTGCGTTGAACTACGAAATCGCCGACATTTCCGAAAGCAAAATCGTGATGAACGAGGTGGAGGTTTTGGCGGCTGAAGCGAGCGTGATCTCTTTCATCAAATGCCCTAGAGTAGGGAATCAAATTGCACGAGCAGCGGCAGCCAAAAGAAGAAGCCAAAATCTGAGCTTTTTGGAGAGACAAACTGAAGCTACGAACCATAGCTCTGTTTCTCTAAACGGAATGCTATCTCCCATTGCCATCGCCATTGGCAGCCATTGTTGA ATGAATGAAGAATTATCGACATGGGGCGTGGGCTGGATAATCCGTGATTCTTCGGGATCTTTAGTTGAAGCTGGATGCAAACAAATCAAACGACGGTGGACCATTAAAACTCTGGAAATCTTAGCGATCAAGGAGGGTTTGAAGGCATACCTAGCGCAAAAGCGAAATCAGAGTGTCCATTTGATCGTGGAGGCGGATGTCCTCAAAGTTATCCGTGCGTTGAACTACGAAATCGCCGACATTTCCGAAAGCAAAATCGTGATGAACGAGGTGGAGGTTTTGGCGGCTGAAGCGAGCGTGATCTCTTTCATCAAATGCCCTAGAGTAGGGAATCAAATTGCACGAGCAGCGGCAGCCAAAAGAAGAAGCCAAAATCTGAGCTTTTTGGAGAGACAAACTGAAGCTACGAACCATAGCTCTGTTTCTCTAAACGGAATGCTATCTCCCATTGCCATCGCCATTGGCAGCCATTGTTGA MNEELSTWGVGWIIRDSSGSLVEAGCKQIKRRWTIKTLEILAIKEGLKAYLAQKRNQSVHLIVEADVLKVIRALNYEIADISESKIVMNEVEVLAAEASVISFIKCPRVGNQIARAAAAKRRSQNLSFLERQTEATNHSSVSLNGMLSPIAIAIGSHC Homology
BLAST of Lcy05g001730 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 6.8e-07 Identity = 37/123 (30.08%), Postives = 69/123 (56.10%), Query Frame = 0
BLAST of Lcy05g001730 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 9.8e-06 Identity = 37/130 (28.46%), Postives = 69/130 (53.08%), Query Frame = 0
BLAST of Lcy05g001730 vs. ExPASy TrEMBL
Match: A0A5C7I858 (Ribonuclease H OS=Acer yangbiense OX=1000413 GN=EZV62_006523 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.3e-05 Identity = 35/109 (32.11%), Postives = 67/109 (61.47%), Query Frame = 0
BLAST of Lcy05g001730 vs. ExPASy TrEMBL
Match: A0A5C7IPE9 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005913 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 2.8e-05 Identity = 40/113 (35.40%), Postives = 63/113 (55.75%), Query Frame = 0
BLAST of Lcy05g001730 vs. ExPASy TrEMBL
Match: A0A6P5S2T0 (uncharacterized protein LOC110751913 OS=Prunus avium OX=42229 GN=LOC110751913 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.8e-04 Identity = 38/115 (33.04%), Postives = 63/115 (54.78%), Query Frame = 0
BLAST of Lcy05g001730 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia]) HSP 1 Score: 63.9 bits (154), Expect = 1.4e-06 Identity = 37/123 (30.08%), Postives = 69/123 (56.10%), Query Frame = 0
BLAST of Lcy05g001730 vs. NCBI nr
Match: KAG6599977.1 (hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 63.2 bits (152), Expect = 2.4e-06 Identity = 39/108 (36.11%), Postives = 59/108 (54.63%), Query Frame = 0
BLAST of Lcy05g001730 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia]) HSP 1 Score: 60.1 bits (144), Expect = 2.0e-05 Identity = 37/130 (28.46%), Postives = 69/130 (53.08%), Query Frame = 0
BLAST of Lcy05g001730 vs. NCBI nr
Match: TXG65248.1 (hypothetical protein EZV62_006523 [Acer yangbiense]) HSP 1 Score: 59.7 bits (143), Expect = 2.6e-05 Identity = 35/109 (32.11%), Postives = 67/109 (61.47%), Query Frame = 0
BLAST of Lcy05g001730 vs. NCBI nr
Match: XP_021753633.1 (uncharacterized protein LOC110719026 [Chenopodium quinoa]) HSP 1 Score: 58.9 bits (141), Expect = 4.5e-05 Identity = 34/106 (32.08%), Postives = 61/106 (57.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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