Lcy05g000900 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g000900
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionGermin-like protein
LocationChr05: 895620 .. 896246 (-)
RNA-Seq ExpressionLcy05g000900
SyntenyLcy05g000900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCACTCCCTATTCATCATTTCCCTCCTCTTCTCCCTTTCCAATGCTGCCGTCCAGGACTTCTGCGTTGCTGATCTAAAAGGTCCACAAGGGCCAGCCGGCTACTCCTGCAAGAGCGCTGCTGACGTGACCGCAGATGACTTTGTTTATTCAGGCTTACGCGGTGCTGGAAACATATCAAGCCTAATCAAAGCTGCAGTCACCCCAGCATTTGTGGAGCAGTATCCAGGTGTGAATGGCCTCGGTCTCTCGGCCGCTCGGTTAGACTTGGCTCCAGGTGGTGTTATACCACTGCACACACACCCAGGAGCTTCAGAATTGCTGCTTGTGACACAAGGTATCATTGAGGCTGGCTTCATCTCTTCTGCTAATGCTGTCTACGTGAAGACTCTGAAAAAGGGAGACCTCATGATATTCCCACAAGGGTTGCTACACTTTCAGATTAATGCTGGTGGTGTGACTGCCGTTGGTTTTCCTATATTTAGCAGCCCAAGCCCTGGTCTCCAAATCACTGACTTTGCACTATTTGCCAACGACTTAAGTACTGATTTGGTGTCGAAGACTACTTTCCTGGACCCGGCTCTGGTGAAGAAGTTTAAGGCTGTTCTTGGTGGGAGTGGTTAG

mRNA sequence

ATGTTTCACTCCCTATTCATCATTTCCCTCCTCTTCTCCCTTTCCAATGCTGCCGTCCAGGACTTCTGCGTTGCTGATCTAAAAGGTCCACAAGGGCCAGCCGGCTACTCCTGCAAGAGCGCTGCTGACGTGACCGCAGATGACTTTGTTTATTCAGGCTTACGCGGTGCTGGAAACATATCAAGCCTAATCAAAGCTGCAGTCACCCCAGCATTTGTGGAGCAGTATCCAGGTGTGAATGGCCTCGGTCTCTCGGCCGCTCGGTTAGACTTGGCTCCAGGTGGTGTTATACCACTGCACACACACCCAGGAGCTTCAGAATTGCTGCTTGTGACACAAGGTATCATTGAGGCTGGCTTCATCTCTTCTGCTAATGCTGTCTACGTGAAGACTCTGAAAAAGGGAGACCTCATGATATTCCCACAAGGGTTGCTACACTTTCAGATTAATGCTGGTGGTGTGACTGCCGTTGGTTTTCCTATATTTAGCAGCCCAAGCCCTGGTCTCCAAATCACTGACTTTGCACTATTTGCCAACGACTTAAGTACTGATTTGGTGTCGAAGACTACTTTCCTGGACCCGGCTCTGGTGAAGAAGTTTAAGGCTGTTCTTGGTGGGAGTGGTTAG

Coding sequence (CDS)

ATGTTTCACTCCCTATTCATCATTTCCCTCCTCTTCTCCCTTTCCAATGCTGCCGTCCAGGACTTCTGCGTTGCTGATCTAAAAGGTCCACAAGGGCCAGCCGGCTACTCCTGCAAGAGCGCTGCTGACGTGACCGCAGATGACTTTGTTTATTCAGGCTTACGCGGTGCTGGAAACATATCAAGCCTAATCAAAGCTGCAGTCACCCCAGCATTTGTGGAGCAGTATCCAGGTGTGAATGGCCTCGGTCTCTCGGCCGCTCGGTTAGACTTGGCTCCAGGTGGTGTTATACCACTGCACACACACCCAGGAGCTTCAGAATTGCTGCTTGTGACACAAGGTATCATTGAGGCTGGCTTCATCTCTTCTGCTAATGCTGTCTACGTGAAGACTCTGAAAAAGGGAGACCTCATGATATTCCCACAAGGGTTGCTACACTTTCAGATTAATGCTGGTGGTGTGACTGCCGTTGGTTTTCCTATATTTAGCAGCCCAAGCCCTGGTCTCCAAATCACTGACTTTGCACTATTTGCCAACGACTTAAGTACTGATTTGGTGTCGAAGACTACTTTCCTGGACCCGGCTCTGGTGAAGAAGTTTAAGGCTGTTCTTGGTGGGAGTGGTTAG

Protein sequence

MFHSLFIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNISSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGFISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFANDLSTDLVSKTTFLDPALVKKFKAVLGGSG
Homology
BLAST of Lcy05g000900 vs. ExPASy Swiss-Prot
Match: Q9ZRA4 (Auxin-binding protein ABP19a OS=Prunus persica OX=3760 GN=ABP19A PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.2e-78
Identity = 143/207 (69.08%), Postives = 166/207 (80.19%), Query Frame = 0

Query: 1   MFHSLFIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNI 60
           +F   F   LL S S+A+VQDFCVAD K P GPAGYSCK  A VT +DFVYSGL  AGN 
Sbjct: 2   IFPIFFTFFLLLSSSHASVQDFCVADYKAPDGPAGYSCKKPAKVTINDFVYSGLGIAGNT 61

Query: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120
           +++IKAAVTPAF  Q+PGVNGLG+S ARLDL PGGVIP HTHPGASE+LLV QG I AGF
Sbjct: 62  TNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGF 121

Query: 121 ISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAND 180
           ++S N  Y+KTLKKGD+M+FPQGLLHFQ+N GG  A+ FP FSSPSPGLQI DFALF ND
Sbjct: 122 VASDNTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPGLQILDFALFKND 181

Query: 181 LSTDLVSKTTFLDPALVKKFKAVLGGS 208
           L T+L+++TTFLD A +KK K VLGG+
Sbjct: 182 LPTELIAQTTFLDAAQIKKLKGVLGGT 208

BLAST of Lcy05g000900 vs. ExPASy Swiss-Prot
Match: O04012 (Auxin-binding protein ABP19b OS=Prunus persica OX=3760 GN=ABP19B PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.1e-75
Identity = 137/207 (66.18%), Postives = 163/207 (78.74%), Query Frame = 0

Query: 1   MFHSLFIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNI 60
           +F   F   LL S S+A+VQDFCVAD K P GPAGYSCK  A VT +DFVYSGL  AGN 
Sbjct: 2   IFPIFFTFFLLLSTSHASVQDFCVADYKAPDGPAGYSCKKPAIVTVNDFVYSGLGIAGNT 61

Query: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120
           +++ KAAVTPAF  Q+PGVNGLG+S ARLDL PGGV+P HTHPGASE+LLV QG I AGF
Sbjct: 62  TNIFKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGF 121

Query: 121 ISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAND 180
           ++S N  Y+KTLKKGD+++FPQGLLHFQ+N G   A+ FP FSSPSPGLQI DFALF ND
Sbjct: 122 VASDNTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPGLQIVDFALFKND 181

Query: 181 LSTDLVSKTTFLDPALVKKFKAVLGGS 208
           L+T+L+++TT LD   +KK K VLGG+
Sbjct: 182 LATELIAQTTLLDAPQIKKLKGVLGGT 208

BLAST of Lcy05g000900 vs. ExPASy Swiss-Prot
Match: L8BRS3 (Germin-like protein OS=Morus alba OX=3498 PE=1 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.1e-73
Identity = 135/203 (66.50%), Postives = 164/203 (80.79%), Query Frame = 0

Query: 6   FIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNISSLIK 65
           F+ SLLFS S+ A+QDFCVAD   PQGPAGYSCK+ A VT D+FVYSGL   GN ++LIK
Sbjct: 7   FLFSLLFSSSHGAIQDFCVADYSAPQGPAGYSCKNPAKVTVDNFVYSGLGITGNTTNLIK 66

Query: 66  AAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGFISSAN 125
           AAVT AF  Q+PGVNGLG+S AR DLAPGGVIP HTHPGASE+++V +G + A F+SS N
Sbjct: 67  AAVTTAFDNQFPGVNGLGISLARPDLAPGGVIPFHTHPGASEIIIVIEGSLCAAFVSSDN 126

Query: 126 AVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFANDLSTDL 185
            VY+K+LKKGD MIFP GLLHFQ+NAG   A+ F  F+SP+PGLQ+ D+ALF NDL+T+L
Sbjct: 127 KVYLKSLKKGDTMIFPSGLLHFQLNAGKNNALFFVAFNSPNPGLQLVDYALFGNDLATEL 186

Query: 186 VSKTTFLDPALVKKFKAVLGGSG 209
           V+  +FLDPA +K+ KAVLGGSG
Sbjct: 187 VAAASFLDPAEIKRLKAVLGGSG 209

BLAST of Lcy05g000900 vs. ExPASy Swiss-Prot
Match: O04011 (Auxin-binding protein ABP20 OS=Prunus persica OX=3760 GN=ABP20 PE=2 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.4e-73
Identity = 136/207 (65.70%), Postives = 164/207 (79.23%), Query Frame = 0

Query: 1   MFHSLFIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNI 60
           +F  LF   LL S SNAAVQDFCVADL  P+GPAG+SCK  A V  +DFV+SGL  AGN 
Sbjct: 7   IFPILFTFFLLLSSSNAAVQDFCVADLAAPEGPAGFSCKKPASVKVNDFVFSGLGIAGNT 66

Query: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120
           S++IKAAVTPAFV Q+PGVNGLG+S ARLDLA GGV+P HTHPGASE+L+V QG I AGF
Sbjct: 67  SNIIKAAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGF 126

Query: 121 ISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAND 180
           ++S N  Y++TL+KGD+M+FPQGLLHFQ+N G   A+ F  F S SPGLQI DFALF ND
Sbjct: 127 VASDNTPYLQTLEKGDIMVFPQGLLHFQVNGGEAPALAFASFGSASPGLQILDFALFKND 186

Query: 181 LSTDLVSKTTFLDPALVKKFKAVLGGS 208
           L T+++++TTFLD A +KK K VLGG+
Sbjct: 187 LPTEVIAQTTFLDAAQIKKLKGVLGGT 213

BLAST of Lcy05g000900 vs. ExPASy Swiss-Prot
Match: P94072 (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana OX=3702 GN=GER3 PE=1 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 6.5e-71
Identity = 136/202 (67.33%), Postives = 160/202 (79.21%), Query Frame = 0

Query: 6   FIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNISSLIK 65
           FIISL+ ++S A+VQDFCVAD KGPQ P+GYSCK+   VT +DF ++GL  AGN S++IK
Sbjct: 9   FIISLISTISFASVQDFCVADPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNIIK 68

Query: 66  AAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGFISSAN 125
           AAVTPAF   Y G+NGLG+S ARLDLA GGVIPLHTHPGASE+L+V QG I AGFISSAN
Sbjct: 69  AAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISSAN 128

Query: 126 AVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFANDLSTDL 185
            VY+KTL +GD M+FPQGLLHFQ+N+G   A+ F  F S SPGLQI  FALFANDL ++L
Sbjct: 129 KVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDLPSEL 188

Query: 186 VSKTTFLDPALVKKFKAVLGGS 208
           V  TTFL  A VKK K VLGG+
Sbjct: 189 VEATTFLSDAEVKKLKGVLGGT 210

BLAST of Lcy05g000900 vs. ExPASy TrEMBL
Match: A0A5D3BXR0 (Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001220 PE=3 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.7e-104
Identity = 196/208 (94.23%), Postives = 201/208 (96.63%), Query Frame = 0

Query: 1   MFHSLFIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNI 60
           MFHSL IISLLFSLSNAAVQDFCVADLKGPQGPAGYSCK A+ VTADDFVY+GLR AGNI
Sbjct: 1   MFHSLLIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKIASVVTADDFVYTGLRAAGNI 60

Query: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120
           SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF
Sbjct: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120

Query: 121 ISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAND 180
           ISSANAVYVKTLKKGDLM+FPQGLLHFQINAGGVTAVGFP+FSSPSPGLQI DFALFAND
Sbjct: 121 ISSANAVYVKTLKKGDLMVFPQGLLHFQINAGGVTAVGFPVFSSPSPGLQILDFALFAND 180

Query: 181 LSTDLVSKTTFLDPALVKKFKAVLGGSG 209
           LSTDLVSKTTFLDP L+KK KAVLGGSG
Sbjct: 181 LSTDLVSKTTFLDPVLIKKLKAVLGGSG 208

BLAST of Lcy05g000900 vs. ExPASy TrEMBL
Match: A0A6J1HMR8 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464356 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.0e-103
Identity = 194/208 (93.27%), Postives = 204/208 (98.08%), Query Frame = 0

Query: 1   MFHSLFIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNI 60
           MFHSLF+I+LLFSLSNAAVQDFCVADLKGPQGPAGY+CKSA  VTADDFVYSGL GAGNI
Sbjct: 1   MFHSLFVIALLFSLSNAAVQDFCVADLKGPQGPAGYACKSA--VTADDFVYSGLSGAGNI 60

Query: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120
           +SLIKAAVTPAFVEQYPGVNGLGLSAARLDL PGGVIPLHTHPGASELL+VTQGII+AGF
Sbjct: 61  TSLIKAAVTPAFVEQYPGVNGLGLSAARLDLLPGGVIPLHTHPGASELLIVTQGIIQAGF 120

Query: 121 ISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAND 180
           ISSANAV+VKTLKKGDLMIFPQGLLHFQINAGGVTAVG+P+FSSPSPGLQITDFALFAND
Sbjct: 121 ISSANAVFVKTLKKGDLMIFPQGLLHFQINAGGVTAVGYPVFSSPSPGLQITDFALFAND 180

Query: 181 LSTDLVSKTTFLDPALVKKFKAVLGGSG 209
           LSTDLVSKTTFLDPALVKKFKA+LGGSG
Sbjct: 181 LSTDLVSKTTFLDPALVKKFKAILGGSG 206

BLAST of Lcy05g000900 vs. ExPASy TrEMBL
Match: A0A0A0KAW6 (Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G450510 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103
Identity = 195/208 (93.75%), Postives = 201/208 (96.63%), Query Frame = 0

Query: 1   MFHSLFIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNI 60
           M HSL IISLLFSLSNAAVQDFCVADLKGPQGPAGYSCK A+ VTADDFV+SGLR AGNI
Sbjct: 1   MLHSLLIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKIASVVTADDFVFSGLRAAGNI 60

Query: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120
           SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF
Sbjct: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120

Query: 121 ISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAND 180
           ISSANAVYVKTLKKGDLM+FPQGLLHFQINAGGVTAVGFP+FSSPSPGLQI DFALFAND
Sbjct: 121 ISSANAVYVKTLKKGDLMVFPQGLLHFQINAGGVTAVGFPVFSSPSPGLQILDFALFAND 180

Query: 181 LSTDLVSKTTFLDPALVKKFKAVLGGSG 209
           LSTDLVSKTTFLDPAL+KK K+VLGGSG
Sbjct: 181 LSTDLVSKTTFLDPALIKKLKSVLGGSG 208

BLAST of Lcy05g000900 vs. ExPASy TrEMBL
Match: A0A6J1KCE7 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494341 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.6e-101
Identity = 191/208 (91.83%), Postives = 201/208 (96.63%), Query Frame = 0

Query: 1   MFHSLFIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNI 60
           MFHSLF+I LLFSLSNAAVQDFCVADLKGPQGPAGY+CKSA  VTADDFVYSGLR AGNI
Sbjct: 35  MFHSLFVIVLLFSLSNAAVQDFCVADLKGPQGPAGYACKSA--VTADDFVYSGLRSAGNI 94

Query: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120
           +S+IKAAVTPAFVEQYPGVNG+GLSAARLDL PGGVIPLHTHPGASELLLVTQGII+AGF
Sbjct: 95  TSIIKAAVTPAFVEQYPGVNGIGLSAARLDLLPGGVIPLHTHPGASELLLVTQGIIQAGF 154

Query: 121 ISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAND 180
           ISSANAV+VKTLKKGDLMIFPQGLLHFQINAGGVTAVG+PIFSS SPGLQITD+ALFAND
Sbjct: 155 ISSANAVFVKTLKKGDLMIFPQGLLHFQINAGGVTAVGYPIFSSSSPGLQITDYALFAND 214

Query: 181 LSTDLVSKTTFLDPALVKKFKAVLGGSG 209
           LSTDLVSKTTFLDP LVKKFKA+LGGSG
Sbjct: 215 LSTDLVSKTTFLDPVLVKKFKAILGGSG 240

BLAST of Lcy05g000900 vs. ExPASy TrEMBL
Match: A0A6J1D2R7 (Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111017042 PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 8.1e-101
Identity = 189/208 (90.87%), Postives = 196/208 (94.23%), Query Frame = 0

Query: 1   MFHSLFIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNI 60
           M H+LFIISLLFSLSNAAVQDFCV DLKGPQGPAGYSCKSA  V  DDFV+SGLR AGNI
Sbjct: 1   MLHALFIISLLFSLSNAAVQDFCVGDLKGPQGPAGYSCKSADKVIVDDFVFSGLRAAGNI 60

Query: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120
           SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGV+PLHTHPGASELL+VTQGI+EAGF
Sbjct: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVVPLHTHPGASELLIVTQGIVEAGF 120

Query: 121 ISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAND 180
           ISSANAVYVKTLKKGDLM+FPQGLLHFQINAGGVTAV FP+FSSPSPGLQITDFALFAND
Sbjct: 121 ISSANAVYVKTLKKGDLMVFPQGLLHFQINAGGVTAVAFPVFSSPSPGLQITDFALFAND 180

Query: 181 LSTDLVSKTTFLDPALVKKFKAVLGGSG 209
           LSTDLV KTTFLDP  VKK KAVLGGSG
Sbjct: 181 LSTDLVVKTTFLDPDQVKKLKAVLGGSG 208

BLAST of Lcy05g000900 vs. NCBI nr
Match: XP_038897216.1 (auxin-binding protein ABP19a [Benincasa hispida])

HSP 1 Score: 388.7 bits (997), Expect = 3.3e-104
Identity = 198/208 (95.19%), Postives = 200/208 (96.15%), Query Frame = 0

Query: 1   MFHSLFIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNI 60
           MFHSL IISLLFSL NAAVQDFCVADLKGPQGPAGYSCKSA  VTADDFVYSGL GAGNI
Sbjct: 1   MFHSLLIISLLFSLCNAAVQDFCVADLKGPQGPAGYSCKSAGVVTADDFVYSGLSGAGNI 60

Query: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120
           SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGII+AGF
Sbjct: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIQAGF 120

Query: 121 ISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAND 180
           ISSANAVYVKTLKKGDLMIFPQGLLHFQIN GGVTAVGFPIFSSPSPGLQI DFALFAND
Sbjct: 121 ISSANAVYVKTLKKGDLMIFPQGLLHFQINGGGVTAVGFPIFSSPSPGLQILDFALFAND 180

Query: 181 LSTDLVSKTTFLDPALVKKFKAVLGGSG 209
           LSTDLVSKTTFLDPAL+KK KAVLGGSG
Sbjct: 181 LSTDLVSKTTFLDPALIKKLKAVLGGSG 208

BLAST of Lcy05g000900 vs. NCBI nr
Match: KAA0059402.1 (auxin-binding protein ABP19a [Cucumis melo var. makuwa] >TYK03925.1 auxin-binding protein ABP19a [Cucumis melo var. makuwa])

HSP 1 Score: 387.9 bits (995), Expect = 5.6e-104
Identity = 196/208 (94.23%), Postives = 201/208 (96.63%), Query Frame = 0

Query: 1   MFHSLFIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNI 60
           MFHSL IISLLFSLSNAAVQDFCVADLKGPQGPAGYSCK A+ VTADDFVY+GLR AGNI
Sbjct: 1   MFHSLLIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKIASVVTADDFVYTGLRAAGNI 60

Query: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120
           SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF
Sbjct: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120

Query: 121 ISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAND 180
           ISSANAVYVKTLKKGDLM+FPQGLLHFQINAGGVTAVGFP+FSSPSPGLQI DFALFAND
Sbjct: 121 ISSANAVYVKTLKKGDLMVFPQGLLHFQINAGGVTAVGFPVFSSPSPGLQILDFALFAND 180

Query: 181 LSTDLVSKTTFLDPALVKKFKAVLGGSG 209
           LSTDLVSKTTFLDP L+KK KAVLGGSG
Sbjct: 181 LSTDLVSKTTFLDPVLIKKLKAVLGGSG 208

BLAST of Lcy05g000900 vs. NCBI nr
Match: XP_022964299.1 (auxin-binding protein ABP19a-like [Cucurbita moschata] >XP_023514157.1 auxin-binding protein ABP19a-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023514158.1 auxin-binding protein ABP19a-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6593548.1 Auxin-binding protein ABP19a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025890.1 Auxin-binding protein ABP19a, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 386.0 bits (990), Expect = 2.1e-103
Identity = 194/208 (93.27%), Postives = 204/208 (98.08%), Query Frame = 0

Query: 1   MFHSLFIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNI 60
           MFHSLF+I+LLFSLSNAAVQDFCVADLKGPQGPAGY+CKSA  VTADDFVYSGL GAGNI
Sbjct: 1   MFHSLFVIALLFSLSNAAVQDFCVADLKGPQGPAGYACKSA--VTADDFVYSGLSGAGNI 60

Query: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120
           +SLIKAAVTPAFVEQYPGVNGLGLSAARLDL PGGVIPLHTHPGASELL+VTQGII+AGF
Sbjct: 61  TSLIKAAVTPAFVEQYPGVNGLGLSAARLDLLPGGVIPLHTHPGASELLIVTQGIIQAGF 120

Query: 121 ISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAND 180
           ISSANAV+VKTLKKGDLMIFPQGLLHFQINAGGVTAVG+P+FSSPSPGLQITDFALFAND
Sbjct: 121 ISSANAVFVKTLKKGDLMIFPQGLLHFQINAGGVTAVGYPVFSSPSPGLQITDFALFAND 180

Query: 181 LSTDLVSKTTFLDPALVKKFKAVLGGSG 209
           LSTDLVSKTTFLDPALVKKFKA+LGGSG
Sbjct: 181 LSTDLVSKTTFLDPALVKKFKAILGGSG 206

BLAST of Lcy05g000900 vs. NCBI nr
Match: XP_004141699.1 (auxin-binding protein ABP19a [Cucumis sativus] >KGN45492.1 hypothetical protein Csa_016297 [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 2.8e-103
Identity = 195/208 (93.75%), Postives = 201/208 (96.63%), Query Frame = 0

Query: 1   MFHSLFIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNI 60
           M HSL IISLLFSLSNAAVQDFCVADLKGPQGPAGYSCK A+ VTADDFV+SGLR AGNI
Sbjct: 1   MLHSLLIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKIASVVTADDFVFSGLRAAGNI 60

Query: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120
           SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF
Sbjct: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120

Query: 121 ISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAND 180
           ISSANAVYVKTLKKGDLM+FPQGLLHFQINAGGVTAVGFP+FSSPSPGLQI DFALFAND
Sbjct: 121 ISSANAVYVKTLKKGDLMVFPQGLLHFQINAGGVTAVGFPVFSSPSPGLQILDFALFAND 180

Query: 181 LSTDLVSKTTFLDPALVKKFKAVLGGSG 209
           LSTDLVSKTTFLDPAL+KK K+VLGGSG
Sbjct: 181 LSTDLVSKTTFLDPALIKKLKSVLGGSG 208

BLAST of Lcy05g000900 vs. NCBI nr
Match: XP_023000032.1 (auxin-binding protein ABP19a-like [Cucurbita maxima])

HSP 1 Score: 378.6 bits (971), Expect = 3.4e-101
Identity = 191/208 (91.83%), Postives = 201/208 (96.63%), Query Frame = 0

Query: 1   MFHSLFIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNI 60
           MFHSLF+I LLFSLSNAAVQDFCVADLKGPQGPAGY+CKSA  VTADDFVYSGLR AGNI
Sbjct: 35  MFHSLFVIVLLFSLSNAAVQDFCVADLKGPQGPAGYACKSA--VTADDFVYSGLRSAGNI 94

Query: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120
           +S+IKAAVTPAFVEQYPGVNG+GLSAARLDL PGGVIPLHTHPGASELLLVTQGII+AGF
Sbjct: 95  TSIIKAAVTPAFVEQYPGVNGIGLSAARLDLLPGGVIPLHTHPGASELLLVTQGIIQAGF 154

Query: 121 ISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAND 180
           ISSANAV+VKTLKKGDLMIFPQGLLHFQINAGGVTAVG+PIFSS SPGLQITD+ALFAND
Sbjct: 155 ISSANAVFVKTLKKGDLMIFPQGLLHFQINAGGVTAVGYPIFSSSSPGLQITDYALFAND 214

Query: 181 LSTDLVSKTTFLDPALVKKFKAVLGGSG 209
           LSTDLVSKTTFLDP LVKKFKA+LGGSG
Sbjct: 215 LSTDLVSKTTFLDPVLVKKFKAILGGSG 240

BLAST of Lcy05g000900 vs. TAIR 10
Match: AT5G20630.1 (germin 3 )

HSP 1 Score: 268.5 bits (685), Expect = 4.6e-72
Identity = 136/202 (67.33%), Postives = 160/202 (79.21%), Query Frame = 0

Query: 6   FIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNISSLIK 65
           FIISL+ ++S A+VQDFCVAD KGPQ P+GYSCK+   VT +DF ++GL  AGN S++IK
Sbjct: 9   FIISLISTISFASVQDFCVADPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNIIK 68

Query: 66  AAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGFISSAN 125
           AAVTPAF   Y G+NGLG+S ARLDLA GGVIPLHTHPGASE+L+V QG I AGFISSAN
Sbjct: 69  AAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISSAN 128

Query: 126 AVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFANDLSTDL 185
            VY+KTL +GD M+FPQGLLHFQ+N+G   A+ F  F S SPGLQI  FALFANDL ++L
Sbjct: 129 KVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDLPSEL 188

Query: 186 VSKTTFLDPALVKKFKAVLGGS 208
           V  TTFL  A VKK K VLGG+
Sbjct: 189 VEATTFLSDAEVKKLKGVLGGT 210

BLAST of Lcy05g000900 vs. TAIR 10
Match: AT1G72610.1 (germin-like protein 1 )

HSP 1 Score: 268.1 bits (684), Expect = 6.0e-72
Identity = 136/208 (65.38%), Postives = 161/208 (77.40%), Query Frame = 0

Query: 1   MFHSLFIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNI 60
           M  ++F++SLLF+LSNA+VQDFCVA+LK  + PAGY C     V A DFV+SGL   GN 
Sbjct: 1   MLRTIFLLSLLFALSNASVQDFCVANLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNT 60

Query: 61  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 120
           +++I AAVTPAF  Q+PG+NGLGLS ARLDLAP GVIP+HTHPGASE+L V  G I AGF
Sbjct: 61  TNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGF 120

Query: 121 ISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAND 180
           +SSANAVYV+TLK G +M+FPQGLLHFQINAG  +A     F+S +PGLQI DFALFAN 
Sbjct: 121 VSSANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPGLQILDFALFANS 180

Query: 181 LSTDLVSKTTFLDPALVKKFKAVLGGSG 209
           L T+LV  TTFLD   VKK K VLGG+G
Sbjct: 181 LPTELVVGTTFLDATTVKKLKGVLGGTG 208

BLAST of Lcy05g000900 vs. TAIR 10
Match: AT1G02335.1 (germin-like protein subfamily 2 member 2 precursor )

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-34
Identity = 79/200 (39.50%), Postives = 120/200 (60.00%), Query Frame = 0

Query: 4   SLFIISLLFSLSNAAVQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNISSL 63
           S  +I+ + +    A+QD CVAD        G+ CK   ++T  DF ++G+     I+S 
Sbjct: 13  SCIMITSIRAYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINST 72

Query: 64  IKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGFISS 123
           + +AVT A VE+ PG+N L +S AR+D APGG+ P HTHP A+E++ V +G +E GFI++
Sbjct: 73  MGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITT 132

Query: 124 ANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAND--L 183
           AN ++ KT+K G++ +FP+GL+HFQ N G   A     F+S  PG       LFA +  L
Sbjct: 133 ANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPAL 192

Query: 184 STDLVSKTTFLDPALVKKFK 202
             D+++KT  +   +V K K
Sbjct: 193 PEDVLTKTFQVGSKMVDKIK 212

BLAST of Lcy05g000900 vs. TAIR 10
Match: AT5G26700.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-33
Identity = 78/201 (38.81%), Postives = 114/201 (56.72%), Query Frame = 0

Query: 3   HSLFIISLLFSLSNAA--VQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNI 62
           H + ++++LF    +A  +QD CVADL       GY+CK +  +T +DF + GL      
Sbjct: 7   HLVVVVTMLFVAMASAEMLQDVCVADLSNAVKVNGYTCKDSTQITPEDFYFKGLANIAAT 66

Query: 63  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 122
           ++   + VT A VE+ PG+N LGLS +R+D AP G+ P H HP ASE++ V +G +  GF
Sbjct: 67  NTSTGSVVTGANVEKLPGLNTLGLSMSRIDYAPNGLNPPHVHPRASEIIFVLEGQLYVGF 126

Query: 123 ISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAND 182
           +++A  +  K L KGD+  FP+GL+HFQ N     A     F S  PG Q    +LF   
Sbjct: 127 VTTAGKLIAKNLNKGDVFTFPKGLIHFQKNIANSPASVLAAFDSQLPGTQSLVASLF-GA 186

Query: 183 LSTDLVSKTTFLDPALVKKFK 202
           L  D+++K+  L    VKK K
Sbjct: 187 LPDDILAKSFQLKHKQVKKIK 206

BLAST of Lcy05g000900 vs. TAIR 10
Match: AT1G09560.1 (germin-like protein 5 )

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-33
Identity = 80/204 (39.22%), Postives = 120/204 (58.82%), Query Frame = 0

Query: 5   LFIISLLFSLSNAA----VQDFCVADLKGPQGPAGYSCKSAADVTADDFVYSGLRGAGNI 64
           L + ++ F +S++A    +QD CVADL       G+ CK AA VT+ DF   GL   G  
Sbjct: 10  LLLTTVSFFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLT 69

Query: 65  SSLIKAAVTPAFVEQYPGVNGLGLSAARLDLAPGGVIPLHTHPGASELLLVTQGIIEAGF 124
           ++   A VT A V   PG+N LG+S +R+D APGG+ P HTHP A+E++ V +G ++ GF
Sbjct: 70  NNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGF 129

Query: 125 ISSANAVYVKTLKKGDLMIFPQGLLHFQINAGGVTAVGFPIFSSPSPGLQITDFALFAN- 184
           +++AN +  ++LKKGD+  FP+GL+HFQ N G V A     F+S  PG Q     LF + 
Sbjct: 130 LTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFGST 189

Query: 185 -DLSTDLVSKTTFLDPALVKKFKA 203
             +  +++++     P  VK  K+
Sbjct: 190 PPVPDNILAQAFQTSPGTVKHIKS 213

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9ZRA43.2e-7869.08Auxin-binding protein ABP19a OS=Prunus persica OX=3760 GN=ABP19A PE=3 SV=1[more]
O040121.1e-7566.18Auxin-binding protein ABP19b OS=Prunus persica OX=3760 GN=ABP19B PE=3 SV=1[more]
L8BRS31.1e-7366.50Germin-like protein OS=Morus alba OX=3498 PE=1 SV=1[more]
O040111.4e-7365.70Auxin-binding protein ABP20 OS=Prunus persica OX=3760 GN=ABP20 PE=2 SV=1[more]
P940726.5e-7167.33Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana OX=3702 GN=GER3... [more]
Match NameE-valueIdentityDescription
A0A5D3BXR02.7e-10494.23Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G... [more]
A0A6J1HMR81.0e-10393.27Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464356 PE=3 SV=1[more]
A0A0A0KAW61.3e-10393.75Germin-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G450510 PE=3 SV=1[more]
A0A6J1KCE71.6e-10191.83Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494341 PE=3 SV=1[more]
A0A6J1D2R78.1e-10190.87Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111017042 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
XP_038897216.13.3e-10495.19auxin-binding protein ABP19a [Benincasa hispida][more]
KAA0059402.15.6e-10494.23auxin-binding protein ABP19a [Cucumis melo var. makuwa] >TYK03925.1 auxin-bindin... [more]
XP_022964299.12.1e-10393.27auxin-binding protein ABP19a-like [Cucurbita moschata] >XP_023514157.1 auxin-bin... [more]
XP_004141699.12.8e-10393.75auxin-binding protein ABP19a [Cucumis sativus] >KGN45492.1 hypothetical protein ... [more]
XP_023000032.13.4e-10191.83auxin-binding protein ABP19a-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT5G20630.14.6e-7267.33germin 3 [more]
AT1G72610.16.0e-7265.38germin-like protein 1 [more]
AT1G02335.11.3e-3439.50germin-like protein subfamily 2 member 2 precursor [more]
AT5G26700.11.1e-3338.81RmlC-like cupins superfamily protein [more]
AT1G09560.11.4e-3339.22germin-like protein 5 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 100..120
score: 53.93
coord: 130..150
score: 56.7
coord: 163..178
score: 45.2
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 52..198
e-value: 1.7E-38
score: 143.9
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 58..195
e-value: 4.4E-30
score: 104.3
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 16..207
e-value: 1.1E-61
score: 209.8
NoneNo IPR availablePANTHERPTHR31238:SF161GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1coord: 5..204
NoneNo IPR availablePANTHERPTHR31238GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3coord: 5..204
NoneNo IPR availableCDDcd02241cupin_OxOxcoord: 15..204
e-value: 5.20536E-80
score: 235.183
IPR019780Germin, manganese binding sitePROSITEPS00725GERMINcoord: 95..108
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 17..201

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g000900.1Lcy05g000900.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0048046 apoplast
molecular_function GO:0030145 manganese ion binding