Lcy04g022730 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g022730
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	transcription factor bHLH144
Location	Chr04: 53873135 .. 53876842 (+)
RNA-Seq Expression	Lcy04g022730
Synteny	Lcy04g022730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTTACCCCTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCTTCCTGCCAGATCTTTAGCTTGCAGACCAAATCTGGAGACTGATCTACCGAACTCTTAAGAAAATCGTCCGATCGTCTTCGTTTTTCTGCCTGATTCAGCTCTAGAATCACGTGGGTGAAAATTTTTGTTTCAATTTTTGAGGAAAACTTGTTTGTTTTGAGCTTCTTTTGGTTTCCGGTAATGGAGCTAGGGCACGTAGAATTTTTTGGGGTTCTTCTTCAATTGCTGGATGCATAGTGGGAGAAGTTAAATTTCGAGTGATTTGTACTTTTAAAAGCTTATTGTTCTGCTTTTTTTTGTTCTTTCTTTGCTGTAATTATTGTTGGTATCTGGGGTTCTGTCCCAATGGGGCTTTTCTAAATTTAACTTAAAATTACTGTGTTATTGATTCTGATCTTGTTGATCTGTCCTGTTTTCCTCTTCGTTTTTGGGTTATTTTGCACTTGATTCTTTTCCTTCCCGTGTTTGGATGATGAGAAAATTAGGTAAAGTGAGTGATTTCGATGGTCCGTGAGGTTCTGTTCAGGGAAGAACGTCTAAACCAGATTAGCGAGTACTTTTATCTTCTAACCTCTCGTAATGCATACGCACATCGTTTATTTAACCTTTTTACCTTAACTATCTTAGTTTTGGTCACTGGGTGTTCTATCTTGATATGCTCGTTGACTAAAGTGAGTTGATGTTTTTACACTAGTTAAATTGTACTTACTGTTTCTCTTTTGCTTGCTTTGCCCTTCAGTTTAGGATTGGGTTCGTCTATGTATTAAGTGGAATTGGAGAATAGAATCAAGATGCCGTGGACAGCTTCCTTGGTGAATTACAGCAGCAAGTGTGTTCGCTTGGTGGTCTTCTTTCGTGTCATTCTGTAATTTGATTTGCATTGGTGAGATTTCTGGAACGAATCCAGTTATGTTGATTATTACCATACTTAAATAGACATCCGCCAAGTTGTCTTGGAGGAAGAAAATGTTTATTTTGGTATGTCAGAACAATGATATTTTCACTGGCTCTGTATTCACTTGCCAAGGGTAGAAATTTGTTGGGCTCTGCTGGATTTATCTTTTCTGTTTTTGAAGGTTTATGAATTGGTCATGGAGAAATATGACTGATTTTGTGTACTTGTTAATATTGTTCTTGTGTTTGTGAAATTTGGGAATTTTAAGCTGTTTGCTTATGGCTGTGCAGGGGGAAATTAAAACGTTGATTTTGCTCGTCTATCTTACTTTTGCGGTTGTTTTACTTTTATTACTGGTTGGAGGAGTGAGAATGTACATTGGTGTAACGGGAAAGAGATACAGAGCTGTCAAGGAAGTTGGGAAGGTTAACATGAGTGTTGGGATCATTGCCTACTACCAAGTGATGCAAGTTTGTCAGGTAAACCACAATCTTTAAATCTTACTCTGCCATGCTTCGTTTGTTGTTTATAGTTCACACATTTGAAGTGTCTGAAATTAAATGTTGTTAGTTGTCTCTTTACTCATCCCAAAGATATCTTTCAACCCTAAATTGATTTCCCAAGTACATGCACTTTAGCTCCTACTTTTCTCTTAAGCCTTTCTCCAAGTGGCTATACTTAATAAATAATAAGTATTGATAAGGGGAGTTTTTAGTTGCAACCCTAATATGGATACTATGACGTTTAGTGGCAATTGATTCTTACTCTTGGTTGTTTAATAGCTAAATTAAGGTTTTATAGTATATTTTCCAAATACTAAGTATGCATATGCATTTTATCATGCCAAAGTTAATTTGTTTGCTTTCTCCTCTCCTCTGCCTTGTTACTTTAAGATTATATTTACTGTATCTCATAGGATTCACTTTGTTTGTTGGCTGTTGCCACTCCTTCGGTGTTCTAGATTTGTATAAATTCTGTAGTTTGAAGAATTGGTTACTGGTGTTATCAAAAAAAAAAAAAAAAAAGAATTGGTTACTGGCGACTTGTTGAATCATTGCAGCCCATCCTTTTAACGTAGATGAATTTCTAAAGCACGTTATTGAATGAATGAATACATAATCATTCTGGGTTCACTTGCTTGTCTTTACTGCTACTAAAGCACATCTTTAAGTGATTCGTTGTTGATGATTTTCAATTTGTTCATTACAGGCCGAGTATTTTCGTCAATTGCTAAAGCCTGTCACGTAGGATAACATTTCAAAAGCATTTGGACATTGGGGAGTTAGGTGGACTGGCCTCCAGTTGTGCTAGAAGTGAAGAAATGAAATATTTCTTTCCTGTTTGTCTTTAGTTTGATATAAAGATCTCGCTTATTTTCAAATGGCAACATATAGAGTTGCTTTGTAGTCTTCTCGTTAGTTAACATCCCGTTTTAATTTTCGTAATATAATAGAGCAAGCTCTCCTGAGAGAAGACACGCTAACTTGAAGTTTGGAGAGTTTCCCGTTTGTTTGTTTCTTTTACATGGACTTCATGCAGAGTGACCTCAACTTTTACCTCAAAAAGGCTATGCTTCCAACAGCAAACCAAGGGGATGACAATCACATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTCCTGGGAGAAAGAACTTGGGGCCTTTGAATACTGTTGAGTTTCAACCTTCTGAAATTTGTCCCCAAAATTTCATCATCTTTGACCACACTGATAATCGAAGCCAAATCATGTTCCATCCTGCAATTGCCAACAAATTTAGTGGTCCTACTGCAAATATGTGCTCAAAGTACATCCAAAAGAATTTTTGCGACAATGACGATCATTTTGACGATAGGGAAATATCATCTCCATTGATGGAGGATTTGGATGATATCGATGCATTATTGAGCTTGGAAGACGAAGATCACGAAGACTTTGATGGATCTGATGATGAAGAGATCAGCACTGCAAGGTCTCATCTGAATTATGGGAATAGATCCCCTGATTCTTCATCCTCCTCTTATAGTTCGAAACCCAGGAAGAAGAATCAGTCATGTAACTCTGTCCACAAGTCGTCAAGCAGTGGAAGCAGCTGCGACAGTGACATGAAACAGTTGAAAGTGAAGAAAATGGTGAGAAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACAACCGTCACCGTTCTGGACGAAGCTGTTAAATATCTGAAATCCCTCAAGGACGAAGTGCAGAAGCTCGGTGTCGGGGGCTTGGAGAACTAAGGCTCAAAGTATGCCTTCCGGTGGCATCAACAGAAGAACTCTGTAAGGATTCTCATATCATGTGTTTCTCCCCTGCCACCTAGTAAAAAGGTTGTACAATGTCTTTTCATGTCACAAGATTAAGTTTCGAATTTCAAATGCCTGCGGCAGATGTGACTGTGGAACCAGGATTTCTTGTCAGGCTCCTGGACTATGTTGTTACCTGTTTTATTCATGTTTTACTTTGGTGTCTGGAAGTTCTCTCTGGGATCGATCTGCCGTTTCTATTGGCATTTGTTGTATTTGCAGAATGATATTTTTGATTTAAGACTGCCATGTACTTTTTCTTGTCTTGAACGTCTATTATCAATCTACTCCAGAATCACTATCAATGGTTTCCTTATCTGTATTTGGTAATATGGAAAAATCTCATAATATTATTGTGGTTTCAGAAAATCTAGCTACAGAAGAATTAGGAAGGAATAGTTCTGTTTCGCTTGCCTCTTTGGTCT

mRNA sequence

CTCTCTTACCCCTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCTTCCTGCCAGATCTTTAGCTTGCAGACCAAATCTGGAGACTGATCTACCGAACTCTTAAGAAAATCGTCCGATCGTCTTCGTTTTTCTGCCTGATTCAGCTCTAGAATCACTTTAGGATTGGGTTCGTCTATGTATTAAGTGGAATTGGAGAATAGAATCAAGATGCCGTGGACAGCTTCCTTGGTGAATTACAGCAGCAAGTGTGTTCGCTTGGTGGTCTTCTTTCGTGTCATTCTGTAATTTGATTTGCATTGGGGGAAATTAAAACGTTGATTTTGCTCGTCTATCTTACTTTTGCGGTTGTTTTACTTTTATTACTGGTTGGAGGAGTGAGAATGTACATTGGTGTAACGGGAAAGAGATACAGAGCTGTCAAGGAAGTTGGGAAGGTTAACATGAGTGTTGGGATCATTGCCTACTACCAAGTGATGCAAGTTTGTCAGGCCGAGTATTTTCGTCAATTGCTAAAGCCTGTCACGTAGGATAACATTTCAAAAGCATTTGGACATTGGGGAGTTAGGTGGACTGGCCTCCAGTTGTGCTAGAAGTGAAGAAATGAAATATTTCTTTCCTGTTTGTCTTTAGTTTGATATAAAGATCTCGCTTATTTTCAAATGGCAACATATAGAGTTGCTTTGTAGTCTTCTCGTTAGTTAACATCCCGTTTTAATTTTCGTAATATAATAGAGCAAGCTCTCCTGAGAGAAGACACGCTAACTTGAAGTTTGGAGAGTTTCCCGTTTGTTTGTTTCTTTTACATGGACTTCATGCAGAGTGACCTCAACTTTTACCTCAAAAAGGCTATGCTTCCAACAGCAAACCAAGGGGATGACAATCACATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTCCTGGGAGAAAGAACTTGGGGCCTTTGAATACTGTTGAGTTTCAACCTTCTGAAATTTGTCCCCAAAATTTCATCATCTTTGACCACACTGATAATCGAAGCCAAATCATGTTCCATCCTGCAATTGCCAACAAATTTAGTGGTCCTACTGCAAATATGTGCTCAAAGTACATCCAAAAGAATTTTTGCGACAATGACGATCATTTTGACGATAGGGAAATATCATCTCCATTGATGGAGGATTTGGATGATATCGATGCATTATTGAGCTTGGAAGACGAAGATCACGAAGACTTTGATGGATCTGATGATGAAGAGATCAGCACTGCAAGGTCTCATCTGAATTATGGGAATAGATCCCCTGATTCTTCATCCTCCTCTTATAGTTCGAAACCCAGGAAGAAGAATCAGTCATGTAACTCTGTCCACAAGTCGTCAAGCAGTGGAAGCAGCTGCGACAGTGACATGAAACAGTTGAAAGTGAAGAAAATGGTGAGAAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACAACCGTCACCGTTCTGGACGAAGCTGTTAAATATCTGAAATCCCTCAAGGACGAAGTGCAGAAGCTCGGTGTCGGGGGCTTGGAGAACTAAGGCTCAAAGTATGCCTTCCGGTGGCATCAACAGAAGAACTCTGTAAGGATTCTCATATCATGTGTTTCTCCCCTGCCACCTAGTAAAAAGGTTGTACAATGTCTTTTCATGTCACAAGATTAAGTTTCGAATTTCAAATGCCTGCGGCAGATGTGACTGTGGAACCAGGATTTCTTGTCAGGCTCCTGGACTATGTTGTTACCTGTTTTATTCATGTTTTACTTTGGTGTCTGGAAGTTCTCTCTGGGATCGATCTGCCGTTTCTATTGGCATTTGTTGTATTTGCAGAATGATATTTTTGATTTAAGACTGCCATGTACTTTTTCTTGTCTTGAACGTCTATTATCAATCTACTCCAGAATCACTATCAATGGTTTCCTTATCTGTATTTGGTAATATGGAAAAATCTCATAATATTATTGTGGTTTCAGAAAATCTAGCTACAGAAGAATTAGGAAGGAATAGTTCTGTTTCGCTTGCCTCTTTGGTCT

Coding sequence (CDS)

ATGGACTTCATGCAGAGTGACCTCAACTTTTACCTCAAAAAGGCTATGCTTCCAACAGCAAACCAAGGGGATGACAATCACATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTCCTGGGAGAAAGAACTTGGGGCCTTTGAATACTGTTGAGTTTCAACCTTCTGAAATTTGTCCCCAAAATTTCATCATCTTTGACCACACTGATAATCGAAGCCAAATCATGTTCCATCCTGCAATTGCCAACAAATTTAGTGGTCCTACTGCAAATATGTGCTCAAAGTACATCCAAAAGAATTTTTGCGACAATGACGATCATTTTGACGATAGGGAAATATCATCTCCATTGATGGAGGATTTGGATGATATCGATGCATTATTGAGCTTGGAAGACGAAGATCACGAAGACTTTGATGGATCTGATGATGAAGAGATCAGCACTGCAAGGTCTCATCTGAATTATGGGAATAGATCCCCTGATTCTTCATCCTCCTCTTATAGTTCGAAACCCAGGAAGAAGAATCAGTCATGTAACTCTGTCCACAAGTCGTCAAGCAGTGGAAGCAGCTGCGACAGTGACATGAAACAGTTGAAAGTGAAGAAAATGGTGAGAAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACAACCGTCACCGTTCTGGACGAAGCTGTTAAATATCTGAAATCCCTCAAGGACGAAGTGCAGAAGCTCGGTGTCGGGGGCTTGGAGAACTAA

Protein sequence

MDFMQSDLNFYLKKAMLPTANQGDDNHMQIPLSSAFPSVLPPGRKNLGPLNTVEFQPSEICPQNFIIFDHTDNRSQIMFHPAIANKFSGPTANMCSKYIQKNFCDNDDHFDDREISSPLMEDLDDIDALLSLEDEDHEDFDGSDDEEISTARSHLNYGNRSPDSSSSSYSSKPRKKNQSCNSVHKSSSSGSSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN

Homology

[Close]

BLAST of Lcy04g022730 vs. ExPASy Swiss-Prot
Match: Q9ASX9 (Transcription factor bHLH144 OS=Arabidopsis thaliana OX=3702 GN=BHLH144 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-32
Identity = 104/241 (43.15%), Postives = 142/241 (58.92%), Query Frame = 0


Query: 23  GDDN-HMQIPLSSAFPSVLPPGRKNLGPLNTVEFQPSEICPQNFIIFDHTDNRSQIMFHP 82
           GD N H      S++ ++ PP  K   P + VE QPS +CP+NF+IFD T +RSQ+M+HP
Sbjct: 14  GDRNMHNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHP 73

Query: 83  AIANK-FSGPTANMCSKYIQKNFC----DNDDHFDDREISSPLMEDLDDIDALLSLEDED 142
            + +K  + P+ N  +   Q  +      N  ++ ++E+SS   ED ++IDALLS  DED
Sbjct: 74  ELTHKLMNTPSLNNLASTFQNEYVGGSYGNYGNY-EQEVSSSYQEDPNEIDALLS-ADED 133

Query: 143 HE-------DFDGSDDEEISTAR-SHLNYGNRSPDSSSSSYSSKPRKKNQSCNSVHKSSS 202
           +E       + DG D EE+STAR S  +YGN + +S  SSY       N S       S+
Sbjct: 134 YEENDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNNSRKQSLSGSA 193

Query: 203 SGSSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLE 250
           S S+ D   ++ K+KKM+  LR I+PGG QM T  VLDEAV+YLKSLK E QKLGVG   
Sbjct: 194 SSSNNDGKGRK-KMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFS 249

[Close]

BLAST of Lcy04g022730 vs. ExPASy TrEMBL
Match: A0A1S3AYV1 (transcription factor bHLH144 OS=Cucumis melo OX=3656 GN=LOC103484384 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.9e-118
Identity = 225/250 (90.00%), Postives = 236/250 (94.40%), Query Frame = 0


Query: 1   MDFMQSDLNFYLKKAMLPTANQGDDNHMQIPLSSAFPSVLPPGRKNLGPLNTVEFQPSEI 60
           MDFMQSDLNFYLKKA  PTA QGDDNHMQIPLSSAFPSVLPPGRKNLGP NTVEFQPSE+
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKFSGPTANMCSKYIQKNFCDNDDHFDDREISSPLM 120
           CPQNFIIFDHTDNRSQIMFHPAIANK SGPTANMCSKYIQKNFC ND+H++DREISSPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDNHYEDREISSPLM 120

Query: 121 EDLDDIDALLSLEDEDHEDFDGSDDEEISTARSHLNYGNRSPDSSSSS-YSSKPRKKNQS 180
           EDLDDIDALLSLE+E+HE  DGS+D+E+STARSHLNYGN+SPDSSSSS YSSKPR KN S
Sbjct: 121 EDLDDIDALLSLENENHEGLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPR-KNHS 180

Query: 181 CNSVHKSSSSGSSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240
            N VHKSSSSGSSC SDMKQLK+KKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV
Sbjct: 181 FNPVHKSSSSGSSCSSDMKQLKLKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240

Query: 241 QKLGVGGLEN 250
           QKLGVGGLEN
Sbjct: 241 QKLGVGGLEN 249

[Close]

BLAST of Lcy04g022730 vs. ExPASy TrEMBL
Match: A0A0A0KLX4 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522710 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.3e-117
Identity = 223/250 (89.20%), Postives = 235/250 (94.00%), Query Frame = 0


Query: 1   MDFMQSDLNFYLKKAMLPTANQGDDNHMQIPLSSAFPSVLPPGRKNLGPLNTVEFQPSEI 60
           MDFMQSDLNFYLKKA  PTA QGDDNHMQIPLSSAFPSVLPPGRKNLGP NTVEFQPSE+
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKFSGPTANMCSKYIQKNFCDNDDHFDDREISSPLM 120
           CPQNFIIFDHTDNRSQIMFHPA+ANK SGPTANMCSKYIQKNFC ND H +DREISSPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPALANKLSGPTANMCSKYIQKNFCVNDKHHEDREISSPLM 120

Query: 121 EDLDDIDALLSLEDEDHEDFDGSDDEEISTARSHLNYGNRSPDSSSSS-YSSKPRKKNQS 180
           EDLDDIDALLSLE+E+HED DGS+D+E+STARSHLNYGN+SPDSSSSS YSSKPR KN S
Sbjct: 121 EDLDDIDALLSLENENHEDLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPR-KNHS 180

Query: 181 CNSVHKSSSSGSSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240
            N VHKSSSSGSSC+SD+KQLK+KKMVRKLREILPGGYQMTTV VLDEAVKYLKSLKDEV
Sbjct: 181 FNPVHKSSSSGSSCNSDVKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEV 240

Query: 241 QKLGVGGLEN 250
           QKLGVGGLEN
Sbjct: 241 QKLGVGGLEN 249

[Close]

BLAST of Lcy04g022730 vs. ExPASy TrEMBL
Match: A0A6J1EDR8 (transcription factor bHLH144-like OS=Cucurbita moschata OX=3662 GN=LOC111433273 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.8e-115
Identity = 227/251 (90.44%), Postives = 234/251 (93.23%), Query Frame = 0


Query: 1   MDFMQSDLNFYLKKAMLPTANQGDDNHMQIPLSSAFPSVLPPGRKNLGPLNTVEFQPSEI 60
           MDFMQSDLN YLK AMLPTANQG DNHMQIPLSSA+PSVLPPGR NLGP NTVEFQPSE+
Sbjct: 1   MDFMQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYPSVLPPGRNNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKFSGPTANMCSKYIQKNFCDNDDHFDD-REISSPL 120
           CPQNFIIFDHTDNRSQIMFHPAIANK SGPTANMCSKYIQKNF  ND+H DD REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 121 MEDLDDIDALLSLEDEDHEDFDGSDDEEISTARSHLNYGNRSPDSSSSSYSSKPRKKNQS 180
           MEDLDDIDALLSL+DEDHED DGS+DEEISTARSHLNYGN+SPDSSSSSYSSKPR KN+S
Sbjct: 121 MEDLDDIDALLSLDDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPR-KNRS 180

Query: 181 CNSVHKSSSSG-SSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240
            N VHK SSSG SS DSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE
Sbjct: 181 FNPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240

Query: 241 VQKLGVGGLEN 250
           VQKLGVGGLEN
Sbjct: 241 VQKLGVGGLEN 250

[Close]

BLAST of Lcy04g022730 vs. ExPASy TrEMBL
Match: A0A5A7UBJ4 (Transcription factor bHLH144 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008860 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.4e-115
Identity = 221/250 (88.40%), Postives = 232/250 (92.80%), Query Frame = 0


Query: 1   MDFMQSDLNFYLKKAMLPTANQGDDNHMQIPLSSAFPSVLPPGRKNLGPLNTVEFQPSEI 60
           M   QSDLNFYLKKA  PTA QGDDNHMQIPLSSAFPSVLPPGRKNLGP NTVEFQPSE+
Sbjct: 32  MQVCQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 91

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKFSGPTANMCSKYIQKNFCDNDDHFDDREISSPLM 120
           CPQNFIIFDHTDNRSQIMFHPAIANK SGPTANMCSKYIQKNFC ND+H++DREISSPLM
Sbjct: 92  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDNHYEDREISSPLM 151

Query: 121 EDLDDIDALLSLEDEDHEDFDGSDDEEISTARSHLNYGNRSPDSSSSS-YSSKPRKKNQS 180
           EDLDDIDALLSLE+E+HE  DGS+D+E+STARSHLNYGN+SPDSSSSS YSSKPR KN S
Sbjct: 152 EDLDDIDALLSLENENHEGLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPR-KNHS 211

Query: 181 CNSVHKSSSSGSSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240
            N VHKSSSSGSSC SDMKQLK+KKMVRKLREILPGGYQMTTV VLDEAVKYLKSLKDEV
Sbjct: 212 FNPVHKSSSSGSSCSSDMKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEV 271

Query: 241 QKLGVGGLEN 250
           QKLGVGGLEN
Sbjct: 272 QKLGVGGLEN 280

[Close]

BLAST of Lcy04g022730 vs. ExPASy TrEMBL
Match: A0A6J1INB7 (transcription factor bHLH144-like OS=Cucurbita maxima OX=3661 GN=LOC111477984 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 3.8e-113
Identity = 225/251 (89.64%), Postives = 231/251 (92.03%), Query Frame = 0


Query: 1   MDFMQSDLNFYLKKAMLPTANQGDDNHMQIPLSSAFPSVLPPGRKNLGPLNTVEFQPSEI 60
           MDFMQSDLN YLK  MLPTANQG DNHMQIPLSSAFPSVLP GR NLGP NTVEFQPSE+
Sbjct: 1   MDFMQSDLNCYLKNTMLPTANQGGDNHMQIPLSSAFPSVLPTGRNNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKFSGPTANMCSKYIQKNFCDNDDHFDD-REISSPL 120
           CPQNFIIFDHTDNRSQIMFHPAIANK SGPTANMCSKYIQKNF  ND+H DD REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 121 MEDLDDIDALLSLEDEDHEDFDGSDDEEISTARSHLNYGNRSPDSSSSSYSSKPRKKNQS 180
           MEDLDDIDALLSLEDEDHED DG +DEEISTARSHLNYGN+SPD SSSSYSS+PR KNQS
Sbjct: 121 MEDLDDIDALLSLEDEDHEDIDGYEDEEISTARSHLNYGNQSPD-SSSSYSSEPR-KNQS 180

Query: 181 CNSVHKSSSSG-SSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240
            N VHK SSSG SSC+SDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE
Sbjct: 181 FNPVHKLSSSGRSSCNSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240

Query: 241 VQKLGVGGLEN 250
           VQKLGVGGLEN
Sbjct: 241 VQKLGVGGLEN 249

[Close]

BLAST of Lcy04g022730 vs. NCBI nr
Match: XP_038881999.1 (transcription factor bHLH144 [Benincasa hispida])

HSP 1 Score: 446.0 bits (1146), Expect = 2.1e-121
Identity = 229/249 (91.97%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MDFMQSDLNFYLKKAMLPTANQGDDNHMQIPLSSAFPSVLPPGRKNLGPLNTVEFQPSEI 60
           MDFMQSDLNFYLK+AM P ANQGDDNHMQIPLSSAFPSVLPPGRKNLGP N VEFQPSE+
Sbjct: 1   MDFMQSDLNFYLKQAMHPRANQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNNVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKFSGPTANMCSKYIQKNFCDNDDHFDDREISSPLM 120
           CPQNFIIFDHTDNRSQIMFHPAIANK SGPTANMCSKYIQKNFC ND+H++DREISSPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCINDEHYEDREISSPLM 120

Query: 121 EDLDDIDALLSLEDEDHEDFDGSDDEEISTARSHLNYGNRSPDSSSSSYSSKPRKKNQSC 180
           EDLDDIDALLSL+DEDHED DGS+DEE STARSHLNYGN+SPDSSSSSYSSKPR KN+S 
Sbjct: 121 EDLDDIDALLSLDDEDHEDLDGSEDEERSTARSHLNYGNQSPDSSSSSYSSKPR-KNKSF 180

Query: 181 NSVHKSSSSGSSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ 240
           N VHKSSSSGSSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ
Sbjct: 181 NPVHKSSSSGSSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ 240

Query: 241 KLGVGGLEN 250
           KLGVGGLEN
Sbjct: 241 KLGVGGLEN 248

[Close]

BLAST of Lcy04g022730 vs. NCBI nr
Match: XP_008439654.1 (PREDICTED: transcription factor bHLH144 [Cucumis melo] >XP_008439656.1 PREDICTED: transcription factor bHLH144 [Cucumis melo])

HSP 1 Score: 434.1 bits (1115), Expect = 8.1e-118
Identity = 225/250 (90.00%), Postives = 236/250 (94.40%), Query Frame = 0


Query: 1   MDFMQSDLNFYLKKAMLPTANQGDDNHMQIPLSSAFPSVLPPGRKNLGPLNTVEFQPSEI 60
           MDFMQSDLNFYLKKA  PTA QGDDNHMQIPLSSAFPSVLPPGRKNLGP NTVEFQPSE+
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKFSGPTANMCSKYIQKNFCDNDDHFDDREISSPLM 120
           CPQNFIIFDHTDNRSQIMFHPAIANK SGPTANMCSKYIQKNFC ND+H++DREISSPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDNHYEDREISSPLM 120

Query: 121 EDLDDIDALLSLEDEDHEDFDGSDDEEISTARSHLNYGNRSPDSSSSS-YSSKPRKKNQS 180
           EDLDDIDALLSLE+E+HE  DGS+D+E+STARSHLNYGN+SPDSSSSS YSSKPR KN S
Sbjct: 121 EDLDDIDALLSLENENHEGLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPR-KNHS 180

Query: 181 CNSVHKSSSSGSSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240
            N VHKSSSSGSSC SDMKQLK+KKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV
Sbjct: 181 FNPVHKSSSSGSSCSSDMKQLKLKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240

Query: 241 QKLGVGGLEN 250
           QKLGVGGLEN
Sbjct: 241 QKLGVGGLEN 249

[Close]

BLAST of Lcy04g022730 vs. NCBI nr
Match: XP_004134628.1 (transcription factor bHLH144 [Cucumis sativus] >XP_004134630.1 transcription factor bHLH144 [Cucumis sativus] >XP_031743511.1 transcription factor bHLH144 [Cucumis sativus] >KGN49377.1 hypothetical protein Csa_003727 [Cucumis sativus])

HSP 1 Score: 430.6 bits (1106), Expect = 9.0e-117
Identity = 223/250 (89.20%), Postives = 235/250 (94.00%), Query Frame = 0


Query: 1   MDFMQSDLNFYLKKAMLPTANQGDDNHMQIPLSSAFPSVLPPGRKNLGPLNTVEFQPSEI 60
           MDFMQSDLNFYLKKA  PTA QGDDNHMQIPLSSAFPSVLPPGRKNLGP NTVEFQPSE+
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKFSGPTANMCSKYIQKNFCDNDDHFDDREISSPLM 120
           CPQNFIIFDHTDNRSQIMFHPA+ANK SGPTANMCSKYIQKNFC ND H +DREISSPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPALANKLSGPTANMCSKYIQKNFCVNDKHHEDREISSPLM 120

Query: 121 EDLDDIDALLSLEDEDHEDFDGSDDEEISTARSHLNYGNRSPDSSSSS-YSSKPRKKNQS 180
           EDLDDIDALLSLE+E+HED DGS+D+E+STARSHLNYGN+SPDSSSSS YSSKPR KN S
Sbjct: 121 EDLDDIDALLSLENENHEDLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPR-KNHS 180

Query: 181 CNSVHKSSSSGSSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEV 240
            N VHKSSSSGSSC+SD+KQLK+KKMVRKLREILPGGYQMTTV VLDEAVKYLKSLKDEV
Sbjct: 181 FNPVHKSSSSGSSCNSDVKQLKLKKMVRKLREILPGGYQMTTVAVLDEAVKYLKSLKDEV 240

Query: 241 QKLGVGGLEN 250
           QKLGVGGLEN
Sbjct: 241 QKLGVGGLEN 249

[Close]

BLAST of Lcy04g022730 vs. NCBI nr
Match: XP_023544178.1 (transcription factor bHLH144 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429.1 bits (1102), Expect = 2.6e-116
Identity = 230/251 (91.63%), Postives = 234/251 (93.23%), Query Frame = 0


Query: 1   MDFMQSDLNFYLKKAMLPTANQGDDNHMQIPLSSAFPSVLPPGRKNLGPLNTVEFQPSEI 60
           MDFMQSDLN YLK AMLPTANQG DNHMQIPLSSAFPSVLPPGR NLGP NTVEFQPSE+
Sbjct: 1   MDFMQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAFPSVLPPGRNNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKFSGPTANMCSKYIQKNFCDNDDHFDD-REISSPL 120
           CPQNFIIFDHTDNRSQIMFHPAIANK SGPTANMCSKYIQKNF  ND+H DD REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 121 MEDLDDIDALLSLEDEDHEDFDGSDDEEISTARSHLNYGNRSPDSSSSSYSSKPRKKNQS 180
           MEDLDDIDALLSLEDEDHED DGS+DEEISTARSHLNYGN+SPDSSSSSYSSKPR KNQS
Sbjct: 121 MEDLDDIDALLSLEDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPR-KNQS 180

Query: 181 CNSVHKSSSSG-SSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240
            N VHK SSSG SS DSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE
Sbjct: 181 FNPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240

Query: 241 VQKLGVGGLEN 250
           VQKLGVGGLEN
Sbjct: 241 VQKLGVGGLEN 250

[Close]

BLAST of Lcy04g022730 vs. NCBI nr
Match: XP_022926036.1 (transcription factor bHLH144-like [Cucurbita moschata])

HSP 1 Score: 425.2 bits (1092), Expect = 3.8e-115
Identity = 227/251 (90.44%), Postives = 234/251 (93.23%), Query Frame = 0


Query: 1   MDFMQSDLNFYLKKAMLPTANQGDDNHMQIPLSSAFPSVLPPGRKNLGPLNTVEFQPSEI 60
           MDFMQSDLN YLK AMLPTANQG DNHMQIPLSSA+PSVLPPGR NLGP NTVEFQPSE+
Sbjct: 1   MDFMQSDLNCYLKNAMLPTANQGGDNHMQIPLSSAYPSVLPPGRNNLGPFNTVEFQPSEV 60

Query: 61  CPQNFIIFDHTDNRSQIMFHPAIANKFSGPTANMCSKYIQKNFCDNDDHFDD-REISSPL 120
           CPQNFIIFDHTDNRSQIMFHPAIANK SGPTANMCSKYIQKNF  ND+H DD REISSPL
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFYVNDEHNDDSREISSPL 120

Query: 121 MEDLDDIDALLSLEDEDHEDFDGSDDEEISTARSHLNYGNRSPDSSSSSYSSKPRKKNQS 180
           MEDLDDIDALLSL+DEDHED DGS+DEEISTARSHLNYGN+SPDSSSSSYSSKPR KN+S
Sbjct: 121 MEDLDDIDALLSLDDEDHEDIDGSEDEEISTARSHLNYGNQSPDSSSSSYSSKPR-KNRS 180

Query: 181 CNSVHKSSSSG-SSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240
            N VHK SSSG SS DSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE
Sbjct: 181 FNPVHKLSSSGRSSRDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDE 240

Query: 241 VQKLGVGGLEN 250
           VQKLGVGGLEN
Sbjct: 241 VQKLGVGGLEN 250

[Close]

BLAST of Lcy04g022730 vs. TAIR 10
Match: AT1G29950.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 1.0e-33
Identity = 104/241 (43.15%), Postives = 142/241 (58.92%), Query Frame = 0


Query: 23  GDDN-HMQIPLSSAFPSVLPPGRKNLGPLNTVEFQPSEICPQNFIIFDHTDNRSQIMFHP 82
           GD N H      S++ ++ PP  K   P + VE QPS +CP+NF+IFD T +RSQ+M+HP
Sbjct: 14  GDRNMHNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHP 73

Query: 83  AIANK-FSGPTANMCSKYIQKNFC----DNDDHFDDREISSPLMEDLDDIDALLSLEDED 142
            + +K  + P+ N  +   Q  +      N  ++ ++E+SS   ED ++IDALLS  DED
Sbjct: 74  ELTHKLMNTPSLNNLASTFQNEYVGGSYGNYGNY-EQEVSSSYQEDPNEIDALLS-ADED 133

Query: 143 HE-------DFDGSDDEEISTAR-SHLNYGNRSPDSSSSSYSSKPRKKNQSCNSVHKSSS 202
           +E       + DG D EE+STAR S  +YGN + +S  SSY       N S       S+
Sbjct: 134 YEENDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNNSRKQSLSGSA 193

Query: 203 SGSSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLE 250
           S S+ D   ++ K+KKM+  LR I+PGG QM T  VLDEAV+YLKSLK E QKLGVG   
Sbjct: 194 SSSNNDGKGRK-KMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFS 249

[Close]

BLAST of Lcy04g022730 vs. TAIR 10
Match: AT1G29950.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 1.0e-33
Identity = 104/241 (43.15%), Postives = 142/241 (58.92%), Query Frame = 0


Query: 23  GDDN-HMQIPLSSAFPSVLPPGRKNLGPLNTVEFQPSEICPQNFIIFDHTDNRSQIMFHP 82
           GD N H      S++ ++ PP  K   P + VE QPS +CP+NF+IFD T +RSQ+M+HP
Sbjct: 14  GDRNMHNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHP 73

Query: 83  AIANK-FSGPTANMCSKYIQKNFC----DNDDHFDDREISSPLMEDLDDIDALLSLEDED 142
            + +K  + P+ N  +   Q  +      N  ++ ++E+SS   ED ++IDALLS  DED
Sbjct: 74  ELTHKLMNTPSLNNLASTFQNEYVGGSYGNYGNY-EQEVSSSYQEDPNEIDALLS-ADED 133

Query: 143 HE-------DFDGSDDEEISTAR-SHLNYGNRSPDSSSSSYSSKPRKKNQSCNSVHKSSS 202
           +E       + DG D EE+STAR S  +YGN + +S  SSY       N S       S+
Sbjct: 134 YEENDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNNSRKQSLSGSA 193

Query: 203 SGSSCDSDMKQLKVKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLE 250
           S S+ D   ++ K+KKM+  LR I+PGG QM T  VLDEAV+YLKSLK E QKLGVG   
Sbjct: 194 SSSNNDGKGRK-KMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFS 249

The following BLAST results are available for this feature:

BLAST of Lcy04g022730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASX9	1.4e-32	43.15	Transcription factor bHLH144 OS=Arabidopsis thaliana OX=3702 GN=BHLH144 PE=1 SV=...	[more]

BLAST of Lcy04g022730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AYV1	3.9e-118	90.00	transcription factor bHLH144 OS=Cucumis melo OX=3656 GN=LOC103484384 PE=4 SV=1	[more]
A0A0A0KLX4	4.3e-117	89.20	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522710 PE=4 S...	[more]
A0A6J1EDR8	1.8e-115	90.44	transcription factor bHLH144-like OS=Cucurbita moschata OX=3662 GN=LOC111433273 ...	[more]
A0A5A7UBJ4	2.4e-115	88.40	Transcription factor bHLH144 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1INB7	3.8e-113	89.64	transcription factor bHLH144-like OS=Cucurbita maxima OX=3661 GN=LOC111477984 PE...	[more]

BLAST of Lcy04g022730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881999.1	2.1e-121	91.97	transcription factor bHLH144 [Benincasa hispida]	[more]
XP_008439654.1	8.1e-118	90.00	PREDICTED: transcription factor bHLH144 [Cucumis melo] >XP_008439656.1 PREDICTED...	[more]
XP_004134628.1	9.0e-117	89.20	transcription factor bHLH144 [Cucumis sativus] >XP_004134630.1 transcription fac...	[more]
XP_023544178.1	2.6e-116	91.63	transcription factor bHLH144 [Cucurbita pepo subsp. pepo]	[more]
XP_022926036.1	3.8e-115	90.44	transcription factor bHLH144-like [Cucurbita moschata]	[more]

BLAST of Lcy04g022730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29950.1	1.0e-33	43.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G29950.2	1.0e-33	43.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..196
None	No IPR available	PANTHER	PTHR36066:SF11	TRANSCRIPTION FACTOR BHLH144	coord: 4..247
IPR037546	Transcription factor SAC51-like	PANTHER	PTHR36066	TRANSCRIPTION FACTOR BHLH145	coord: 4..247
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 186..235 score: 8.64477
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 201..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g022730.1	Lcy04g022730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity