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Lcy04g022440 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCATATTAAAATATTTGAATATCTATATTTCCATCCTAGATTGTATCGATGACACAAATTTGAGAGATCTTACATGAAAATGGAGGATAAGTAAAGACTTATTTTCATAGCAGCAAAGCGAAGTGGTAACTTCCAAGTTCCACCGCCACCCACCGCTCTAAGGCAAATCCATGGAGTCCGATACTGAAATGGTTAACTTCGGAAGATCCATCATAGTGCCCAGTGTTCTCGAGCTCGCTAAGCAGCCCATCGCTAAGATCCCCCTTCGCTATGAACGGGCAGATCAGGACCCGCCGATCCTTTCCGTCGGAGAATCTGGACCGTCGGTACCGGTCGTCGATCTTCATCGATTGGCCGTCGGAGATTCTGCTGCTCCAGAAATGGACAAGTTGCACTCTGCGTGTAAGGAATGGGGATTCTTCCAGGTATGTTTATTCTCAATTGTGCCCTAATCTTCTAATTCCAATCTGTTGGGACTGTGACTGTGAGTCGTCAAGCAAGGAACCAATTTGGGCTTCCACTTTTTGTTGCAATTTGGGCTTTCTACGTCGGCCCAGGCCTCCTTTCAAAAATTTGTTGCAATCATATATACTTGTTTCAAAAATTAGTAATAGAAGTTACTATGTGATTGTGATAGTAACTTCTATTACTATTTTATTTTCTTTGACCACGATTTTAGTTTTAAGTTATGATTATCAAGTGTTGTGTCTTCTCATATCACTAGAGAATTCTTGAAATATCTGGCAAACGTTAAAGTAAAAGGCAACACTGATTATATCTAGAAGCTTCTTGATACACATGACTTAAATATATTAGAACTCTCTAAATTTATGTTGAAGATTGTAAATTAATATCTCAAAGGAAAGGCTTTAGAAATATCTTAGTCTTTCATACAGCTCCAAAAAATAGATCTAAGAAAGAGTCCAAAAAAATCTCTTTTGTTTGGGTTCCAAGTATCTTACGCCTCTAAATAGAAAGTGTGTCCTCCGTAAAAAAAATAAAAAATAGGAAGAGTGAGTAAAGTAGTTTTCTCTCCAAAGTTGGTCTTGATACTTCCTTAATAAAAGTTTCCTTTTGTGCTGATTTCTCAAAAGCAAATTGGTATAAATGATGAGTTACAAAATTGTTAATATCATTTTACATCCTTTATTAAGGCCTTTGATCTCATACAAGGTTTATGGTGAGAGAGCTTTTCCTTCTATTAAGGCAGGTTGGTTAGTAAATTCTAAAAGTAATATCGTTGAAACACTTTAATTTGAAATAAATGACTCAAATAACTCAGAACCTCTATAATCCAACCATTGTAATAGAAATCTTGAATGAGGGACTTGAAGAAAAGAGGATTGACAGGAATACGAGAAAGGTTACAGTATGAAGAAGAATCTCTGTGTGAAAGAACCCTAGGAGTTACCTATACACTTTCTTCTTGTTTTTGTGAAATCTGGCACTTGCTGGCCTGTGGTTGGTTCAAAAAGACAGAGCTTTGGTTAATTGTTTTTTGCAGATTATAAACCATGGAGTTCCCACCTCATTGCTGGAGGAATTCAGAATGCAAATTGTAAGTTTCTTTAATCTTCCCTATGAAGAAAAGAAGCTGCTTTGGCAAGACCCACAGGACCACGAAGGATTTGGGCAGCTCTTTGTGGTATCAGAGGAGCAAAAGCTCGATTGGTCAGACATGTTCTACATAACCACTCTCCCTCTTAATCTGAGGAAGCCTCATCTATTTCAAAAGCTTCCACTAAAACTCAGGTTTTTGGCCAAATTCTTGAAGCTCTAATCGAATTGTATGATTTAGATTTCTAATTCACTTACTTGTTGCAGAGAGACTTTGGAAGCTTACTCAACAGAAGTTAAGAAGTTAGCAATTGTTATCTTGGACCATTTGGCTGGAGCTCTGAAGATGGATGTTGAGGAAATGAGGGAGCTGTTTAGAGATGGTGTTCAGTCAATGAGGATGAATTACTATCCTCCATGTCCCGAACCCGAGAAGGCCATCGGATTCTCAGCTCATTCGGATGCCGATGCTCTGACAATTCTCTATCAACTCAATGAAGCCGAAGGATTGCAAATTCGGAAAGATGGGAGATGGGTTTCTGTTAAACCACTTCCAAATGCATTTGTAGTCAACATTGGAGACATCATGGAGGTGATTCATGATTTTTGTGCATTGAAGAATTTCTTCTGATCTTGTCGATAAATTTGTTAGCAATTTACTATCTTTGGCCTGTCTCCCTGCCTTTGCTGCAGATTGTAAGCAATGGTGTATACAAGAGCATCGAGCATCGAGTTTCGTTGAATTATTCCAAGGAAAGGCTCTCGGTTGCAACATTCTATAGTTCAAATCTGAACTCGGAGCTCGGTCCAGCCAAGAGCCTCATAGGACCGCATAACCCAGCAGTTTTTCGGAGAGTTGCATTGGAGAAGTACTTCAAAGAATTCTTTGCTAGAAAACTAGAAGGAAAATCATACCTTGAGCATATGAGAATAGAGAATGTGGAATAAAATGTTACGGTTGGTCTTACATTCTTAACGATTAATTTTCTGACCTTCATAATTGTAGTAGAATTGTAGGATAAAAACGAATTTCTTATCATAAGTCTGTAATCTTTCTATTGTTATGGTCTGAATGTTGGAGCAAAAACTTAGCAGTTTTTGCATGTCTGAAGCCTGCTT TCCATATTAAAATATTTGAATATCTATATTTCCATCCTAGATTGTATCGATGACACAAATTTGAGAGATCTTACATGAAAATGGAGGATAAGTAAAGACTTATTTTCATAGCAGCAAAGCGAAGTGGTAACTTCCAAGTTCCACCGCCACCCACCGCTCTAAGGCAAATCCATGGAGTCCGATACTGAAATGGTTAACTTCGGAAGATCCATCATAGTGCCCAGTGTTCTCGAGCTCGCTAAGCAGCCCATCGCTAAGATCCCCCTTCGCTATGAACGGGCAGATCAGGACCCGCCGATCCTTTCCGTCGGAGAATCTGGACCGTCGGTACCGGTCGTCGATCTTCATCGATTGGCCGTCGGAGATTCTGCTGCTCCAGAAATGGACAAGTTGCACTCTGCGTGTAAGGAATGGGGATTCTTCCAGGTATGTTTATTCTCAATTGTGCCCTAATCTTCTAATTCCAATCTGTTGGGACTGTGACTGTGAGTCGTCAAGCAAGGAACCAATTTGGGCTTCCACTTTTTGTTGCAATTTGGGCTTTCTACGTCGGCCCAGGCCTCCTTTCAAAAATTTGTTGCAATCATATATACTTGTTTCAAAAATTAGTAATAGAAGTTACTATGTGATTGTGATAGTAACTTCTATTACTATTTTATTTTCTTTGACCACGATTTTAGTTTTAAGTTATGATTATCAAGTGTTGTGTCTTCTCATATCACTAGAGAATTCTTGAAATATCTGGCAAACGTTAAAGTAAAAGGCAACACTGATTATATCTAGAAGCTTCTTGATACACATGACTTAAATATATTAGAACTCTCTAAATTTATGTTGAAGATTGTAAATTAATATCTCAAAGGAAAGGCTTTAGAAATATCTTAGTCTTTCATACAGCTCCAAAAAATAGATCTAAGAAAGAGTCCAAAAAAATCTCTTTTGTTTGGGTTCCAAGTATCTTACGCCTCTAAATAGAAAGTGTGTCCTCCGTAAAAAAAATAAAAAATAGGAAGAGTGAGTAAAGTAGTTTTCTCTCCAAAGTTGGTCTTGATACTTCCTTAATAAAAGTTTCCTTTTGTGCTGATTTCTCAAAAGCAAATTGGTATAAATGATGAGTTACAAAATTGTTAATATCATTTTACATCCTTTATTAAGGCCTTTGATCTCATACAAGGTTTATGGTGAGAGAGCTTTTCCTTCTATTAAGGCAGGTTGGTTAGTAAATTCTAAAAGTAATATCGTTGAAACACTTTAATTTGAAATAAATGACTCAAATAACTCAGAACCTCTATAATCCAACCATTGTAATAGAAATCTTGAATGAGGGACTTGAAGAAAAGAGGATTGACAGGAATACGAGAAAGGTTACAGTATGAAGAAGAATCTCTGTGTGAAAGAACCCTAGGAGTTACCTATACACTTTCTTCTTGTTTTTGTGAAATCTGGCACTTGCTGGCCTGTGGTTGGTTCAAAAAGACAGAGCTTTGGTTAATTGTTTTTTGCAGATTATAAACCATGGAGTTCCCACCTCATTGCTGGAGGAATTCAGAATGCAAATTGTAAGTTTCTTTAATCTTCCCTATGAAGAAAAGAAGCTGCTTTGGCAAGACCCACAGGACCACGAAGGATTTGGGCAGCTCTTTGTGGTATCAGAGGAGCAAAAGCTCGATTGGTCAGACATGTTCTACATAACCACTCTCCCTCTTAATCTGAGGAAGCCTCATCTATTTCAAAAGCTTCCACTAAAACTCAGAGAGACTTTGGAAGCTTACTCAACAGAAGTTAAGAAGTTAGCAATTGTTATCTTGGACCATTTGGCTGGAGCTCTGAAGATGGATGTTGAGGAAATGAGGGAGCTGTTTAGAGATGGTGTTCAGTCAATGAGGATGAATTACTATCCTCCATGTCCCGAACCCGAGAAGGCCATCGGATTCTCAGCTCATTCGGATGCCGATGCTCTGACAATTCTCTATCAACTCAATGAAGCCGAAGGATTGCAAATTCGGAAAGATGGGAGATGGGTTTCTGTTAAACCACTTCCAAATGCATTTGTAGTCAACATTGGAGACATCATGGAGATTGTAAGCAATGGTGTATACAAGAGCATCGAGCATCGAGTTTCGTTGAATTATTCCAAGGAAAGGCTCTCGGTTGCAACATTCTATAGTTCAAATCTGAACTCGGAGCTCGGTCCAGCCAAGAGCCTCATAGGACCGCATAACCCAGCAGTTTTTCGGAGAGTTGCATTGGAGAAGTACTTCAAAGAATTCTTTGCTAGAAAACTAGAAGGAAAATCATACCTTGAGCATATGAGAATAGAGAATGTGGAATAAAATGTTACGGTTGGTCTTACATTCTTAACGATTAATTTTCTGACCTTCATAATTGTAGTAGAATTGTAGGATAAAAACGAATTTCTTATCATAAGTCTGTAATCTTTCTATTGTTATGGTCTGAATGTTGGAGCAAAAACTTAGCAGTTTTTGCATGTCTGAAGCCTGCTT ATGCAAATTGTAAGTTTCTTTAATCTTCCCTATGAAGAAAAGAAGCTGCTTTGGCAAGACCCACAGGACCACGAAGGATTTGGGCAGCTCTTTGTGGTATCAGAGGAGCAAAAGCTCGATTGGTCAGACATGTTCTACATAACCACTCTCCCTCTTAATCTGAGGAAGCCTCATCTATTTCAAAAGCTTCCACTAAAACTCAGAGAGACTTTGGAAGCTTACTCAACAGAAGTTAAGAAGTTAGCAATTGTTATCTTGGACCATTTGGCTGGAGCTCTGAAGATGGATGTTGAGGAAATGAGGGAGCTGTTTAGAGATGGTGTTCAGTCAATGAGGATGAATTACTATCCTCCATGTCCCGAACCCGAGAAGGCCATCGGATTCTCAGCTCATTCGGATGCCGATGCTCTGACAATTCTCTATCAACTCAATGAAGCCGAAGGATTGCAAATTCGGAAAGATGGGAGATGGGTTTCTGTTAAACCACTTCCAAATGCATTTGTAGTCAACATTGGAGACATCATGGAGATTGTAAGCAATGGTGTATACAAGAGCATCGAGCATCGAGTTTCGTTGAATTATTCCAAGGAAAGGCTCTCGGTTGCAACATTCTATAGTTCAAATCTGAACTCGGAGCTCGGTCCAGCCAAGAGCCTCATAGGACCGCATAACCCAGCAGTTTTTCGGAGAGTTGCATTGGAGAAGTACTTCAAAGAATTCTTTGCTAGAAAACTAGAAGGAAAATCATACCTTGAGCATATGAGAATAGAGAATGTGGAATAA MQIVSFFNLPYEEKKLLWQDPQDHEGFGQLFVVSEEQKLDWSDMFYITTLPLNLRKPHLFQKLPLKLRETLEAYSTEVKKLAIVILDHLAGALKMDVEEMRELFRDGVQSMRMNYYPPCPEPEKAIGFSAHSDADALTILYQLNEAEGLQIRKDGRWVSVKPLPNAFVVNIGDIMEIVSNGVYKSIEHRVSLNYSKERLSVATFYSSNLNSELGPAKSLIGPHNPAVFRRVALEKYFKEFFARKLEGKSYLEHMRIENVE Homology
BLAST of Lcy04g022440 vs. ExPASy Swiss-Prot
Match: Q39224 (Protein SRG1 OS=Arabidopsis thaliana OX=3702 GN=SRG1 PE=2 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 4.9e-84 Identity = 146/257 (56.81%), Postives = 198/257 (77.04%), Query Frame = 0
BLAST of Lcy04g022440 vs. ExPASy Swiss-Prot
Match: D4N501 (Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum OX=3469 GN=DIOX2 PE=2 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 9.2e-83 Identity = 149/258 (57.75%), Postives = 198/258 (76.74%), Query Frame = 0
BLAST of Lcy04g022440 vs. ExPASy Swiss-Prot
Match: D4N502 (Codeine O-demethylase OS=Papaver somniferum OX=3469 GN=CODM PE=1 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 2.0e-82 Identity = 141/256 (55.08%), Postives = 198/256 (77.34%), Query Frame = 0
BLAST of Lcy04g022440 vs. ExPASy Swiss-Prot
Match: D4N500 (Thebaine 6-O-demethylase OS=Papaver somniferum OX=3469 GN=T6ODM PE=1 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 8.9e-78 Identity = 141/259 (54.44%), Postives = 194/259 (74.90%), Query Frame = 0
BLAST of Lcy04g022440 vs. ExPASy Swiss-Prot
Match: Q94LP4 (2-oxoglutarate-dependent dioxygenase 11 OS=Oryza sativa subsp. japonica OX=39947 GN=2ODD11 PE=1 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 1.7e-52 Identity = 98/255 (38.43%), Postives = 158/255 (61.96%), Query Frame = 0
BLAST of Lcy04g022440 vs. ExPASy TrEMBL
Match: A0A6J1EG75 (protein SRG1-like OS=Cucurbita moschata OX=3662 GN=LOC111433084 PE=3 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 3.2e-131 Identity = 236/259 (91.12%), Postives = 248/259 (95.75%), Query Frame = 0
BLAST of Lcy04g022440 vs. ExPASy TrEMBL
Match: A0A5D3CMW3 (Protein SRG1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008600 PE=3 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 1.6e-130 Identity = 231/258 (89.53%), Postives = 248/258 (96.12%), Query Frame = 0
BLAST of Lcy04g022440 vs. ExPASy TrEMBL
Match: A0A1S3AZZ1 (protein SRG1-like OS=Cucumis melo OX=3656 GN=LOC103484408 PE=3 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 1.6e-130 Identity = 231/258 (89.53%), Postives = 248/258 (96.12%), Query Frame = 0
BLAST of Lcy04g022440 vs. ExPASy TrEMBL
Match: A0A6J1ILW1 (protein SRG1-like OS=Cucurbita maxima OX=3661 GN=LOC111478593 PE=3 SV=1) HSP 1 Score: 473.8 bits (1218), Expect = 4.7e-130 Identity = 234/259 (90.35%), Postives = 248/259 (95.75%), Query Frame = 0
BLAST of Lcy04g022440 vs. ExPASy TrEMBL
Match: A0A0A0KLU1 (Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G520990 PE=3 SV=1) HSP 1 Score: 470.3 bits (1209), Expect = 5.2e-129 Identity = 231/257 (89.88%), Postives = 245/257 (95.33%), Query Frame = 0
BLAST of Lcy04g022440 vs. NCBI nr
Match: XP_022925778.1 (protein SRG1-like [Cucurbita moschata] >KAG6581393.1 Protein SRG1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 477.6 bits (1228), Expect = 6.7e-131 Identity = 236/259 (91.12%), Postives = 248/259 (95.75%), Query Frame = 0
BLAST of Lcy04g022440 vs. NCBI nr
Match: XP_023544157.1 (protein SRG1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 476.1 bits (1224), Expect = 1.9e-130 Identity = 235/259 (90.73%), Postives = 248/259 (95.75%), Query Frame = 0
BLAST of Lcy04g022440 vs. NCBI nr
Match: KAA0052581.1 (protein SRG1-like [Cucumis melo var. makuwa] >TYK13243.1 protein SRG1-like [Cucumis melo var. makuwa]) HSP 1 Score: 475.3 bits (1222), Expect = 3.3e-130 Identity = 231/258 (89.53%), Postives = 248/258 (96.12%), Query Frame = 0
BLAST of Lcy04g022440 vs. NCBI nr
Match: XP_008439690.1 (PREDICTED: protein SRG1-like [Cucumis melo]) HSP 1 Score: 475.3 bits (1222), Expect = 3.3e-130 Identity = 231/258 (89.53%), Postives = 248/258 (96.12%), Query Frame = 0
BLAST of Lcy04g022440 vs. NCBI nr
Match: XP_038883132.1 (protein SRG1-like [Benincasa hispida] >XP_038883136.1 protein SRG1-like [Benincasa hispida]) HSP 1 Score: 473.8 bits (1218), Expect = 9.6e-130 Identity = 233/257 (90.66%), Postives = 245/257 (95.33%), Query Frame = 0
BLAST of Lcy04g022440 vs. TAIR 10
Match: AT4G25310.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 325.9 bits (834), Expect = 3.0e-89 Identity = 156/255 (61.18%), Postives = 197/255 (77.25%), Query Frame = 0
BLAST of Lcy04g022440 vs. TAIR 10
Match: AT4G25300.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 317.4 bits (812), Expect = 1.1e-86 Identity = 151/256 (58.98%), Postives = 195/256 (76.17%), Query Frame = 0
BLAST of Lcy04g022440 vs. TAIR 10
Match: AT1G17020.1 (senescence-related gene 1 ) HSP 1 Score: 312.4 bits (799), Expect = 3.5e-85 Identity = 146/257 (56.81%), Postives = 198/257 (77.04%), Query Frame = 0
BLAST of Lcy04g022440 vs. TAIR 10
Match: AT1G17010.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 303.1 bits (775), Expect = 2.1e-82 Identity = 143/257 (55.64%), Postives = 191/257 (74.32%), Query Frame = 0
BLAST of Lcy04g022440 vs. TAIR 10
Match: AT1G78550.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 287.7 bits (735), Expect = 9.1e-78 Identity = 136/255 (53.33%), Postives = 186/255 (72.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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