Lcy04g021810 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTGTTTGATGCAACTTCTCCTCTACACACTCCTATACTCGTTAGTTTCAGCTTCGACCTAGAGTTTACATGGCGTAAGCTCGGATCATTGAGCTGGGTTTTTACAGCAAGAACCCGATTTCCTTGCCATCGTCGTCTTCCAATGAAAGTGTGAAAGACGGTCGATGCTTCCAAAGGGTTCTATCTCCAATTGATTACCGAATTTTATTTCTCCGCGATGCGAAGATTACGAACAGTGAGGACCGTTGCTGGTTCTGCGAAAACTCTTCTCACTAGTGCTTCGCCAGCGGTTCGACAACCTTCTCGGTCCTATTTTGCTAATGTGAGTATTGAGAAACTGCAAAAGGAAGCTATTCCTTGTGATTTCCTCAAATGGTGTTCGCTTGGTTTCTTTCGGACTTCGAGATTCGCTACTGGGTTCACCCCATTGCAACCAAAGCCGTTGGATTCTATCATTGATATGGAGAGAGCGAAAGATCGGTCACCGGAGGACCTCGCTTCCATTTGGGATGATGTAATGTTTCTTCTTCTTTTTTTATTTTGCTTAATTTTAGCCCCAATTATCGTTTCTGGTTGTAAGATTTTGAAATGCTTTATACTCGAACTCTTCAGTCTTTAGGATTGGTTAATTTATTAGAAGAGATTAATGTGCGAGAAAAGACATTTTTTATGAATGCGAGCACTCTGGTGCAATGTTTGAATTTAGAATCGGCAGAACCTTTGTAGTTGTTAGTCATGAGTCAGAGGCTCCATTCTGAATTTAGTCACTTACTTTTCATAAATTTCAGACGAAATGAATTTTTGTACTGCATACTTTCACAGTACCCTCCAATTTTCCAGATTCCAGGACTGAGAGACAAACAGATGTAGTTTCTAGAACCGAGAAACAAAAGTGCTCCTCATATTCCCTTCATATGGATAATCCATTTCCTGGGATAATGGCTTCGTGAATTGCTCTTCAACGATTTATGAGTTTAAAAGTAATTTAACAGAAGAAATTGTTTTATCTTAGTTGGGCCTACTTCTTAACTCAGAACGTTGGTTAGATGTTTTCATTATTAGAAACTTTAGTAAAACCATGGATGGTTTTCTTTCCTTTTTACCCCCTTTAAGCAATTATTCTTACGTTCTTTTATCGGGTTCTGCCGTACCAGTATCACTTGGGAAGAGGTCATATTGGTGCATCAATGAAAGCTAAACTATATCATTTATTGGAACAACGAGCAGCAGACTGGTAATTATTAAACATTTTTCTAATGCTGCTGTGAGCCATTTTCAGTATTTTCCCGTTCTAACTTTAATGCAATCTTGCAGCCGATACTTTGTTCTTCCTTTGTGGCGTGGAAGTGGTTATACTAGCATGTTTGTTCAAGGTTTGGTCTTTAACTCGTGGCTTCAAGTTATCTGTTTATATAAATAGAAAAAAAGTGTCTATATCTGAAAGTTGTATAATTTGATGCCAGTACTTAATCCTTTGATGTATTTTCTTTTTCTCCCTCCCTCTTTGTTTAATTGAAATTAGAATAGCCATATGATGAATCATTCATCATTTGATTTGTTATAACCAACTACAATGGTACGCAAAATACATAGAATTAAAAATCTTTAAACTACAATACAACAAATCTATCATGCTGTTAATGAACCCTATAATTTCTTAGAACATCTTGGCTATGAAACCATTGTGCTTCGTACATTAATTTGAAAGCAAGTTGATCTAGATGATCATCTATAGTATATAAGACATGAATTCTCACTTTGATATGTTTCAAAACCAAAAAAAGTCTCACTTTGCTGTCACTATATCACCAGTCAAGTTATCAGGTAAACCCACGCTTAGGAAATGCAGATGTGATCAGGTGCCTGGAGCTTTTTTTTTTCCTCCTTTTGATTAGAAAAGAGTCTTTCATTGAATGAATTGAGGTACAAAAACAGAAGATAAGATATCCACTGTAAACAAATGAAAGCTTACAAAGAAGGTCCTCAAATGCCAAAAATAAATACCATAATTACAAAGGAGTGTTGACAGTCTATACTGTTGGAACTAATAATCATAGCTAAATGCTACCTCCCACACTTCTTTTACCGCTTACCTTCTCCTTTAAGATTCTTTGTTTCCTTTCTACCCAATTTTGTTTCTTAAAATAGCCTTCACTTCATTGGCTAGTAAAGTTTTACGTTTTTCCTGAAGCTTAACCTACATTTTCAAGTTGTTGCTTGTATTGTATTGTTGGAAGAAATCAGGAGAAAGAAAAAAATAAATCAAAGATAAATAAGGCTTCGGAAAAGATAGGATAAACCAACCTTTCACCCACGTGCCTGATTTATGAATTACATTCAGTCCATCCAGCTTCGGTGTTTCAAAGAAATCAAGTTCCTTCTACTATAATGAATTTCATGTTGCTTTGGGAGAGGGTCTAGCATCTTGATGAAACAATTGCTCGACCTTATCATTGCTTGTTGTTATGGCTTTTAGTACATACGTTTGAAGTCTTGCATACTCAAAATGGTGGTTGCACGTGACAGTTCTGGAAACTTGTTATAGAACGAGATCTTAACTATATGTTGGGTTGTGGGACATGGAACACAGAATTGAATCCTGCTAGCGATGGTTATAATTCAATTTAAATGCTCAACTAGGATATATATGATTCAATTTGCAGTACAAATGCCGCACATCCTTTTCACTGGCCTTGAAGATTACAAGGCAAGAGGAACTCAAGCTGCTCCCTACTTCACCGTGTCCTATTATAAAGAATTTGCAGAGAGCAAGGATATGGTGCTTATTCGAGGTGATATTGTGTTTACAAGCAAGCTCACTGACCCGGAGGCAGAATGGCTTTTAGAGACCACCCAATCGTTCTATCTGAACGATGTTCGGTACAAGCTGGTTGAACGGTTCAACAGACAAACACGTGATTTTGAGTTCAAGGATGTTTTACAAGCACTGGAAATGCCCATTTTATGATTTCTGCGGAACTTAGCAGGCAATAGTGCCCTCTAAGAGGTAATAAGAAATTTAACCAAACATGTCAAAGCCTTTATAAGGCTATTATTCATAATTCTTCATAATTTTGAATAGGCTCCAACCCGGCTCAGCCTCTTGTTTTGACTTGTTTAGAGAGAACAATCAAATGCTTTATTCATGGTGAGTTCCTAGGATTTGAGAAGTGTTCCCTCCAGAGAGGAAGTATTCCACTAATTAGTCAACAGAGTTTTTCTTTTTCGCATACTGGACTTGACATTTCAATAGTTTTTTCTTTGTGGAGGTTGGGGAACTACAAATTTATAAATTGAATGCCCAGAATTTTCTGATCATTTTATTTGAAGTGTAGGTGAAAATTGGAATCAGACCCATATTTTTCTTCAAAATTCGATCTATACTTTCTACCTTATTTAATTTTCTTCATTTCTCTTGAAATGTTATTGAGATTCGAGATTTTTAGGCATGTAAAAAATCTATGTATTTTGAGGTGTATCAAATACTTTGGGAAGGAAACGCCTTGGAAGCGCAGATCAATGAAGAAAATATTACAGCATTTACTTGAAGGGAACATAAATGAAGAGAATGAAAAT ACTGTTTGATGCAACTTCTCCTCTACACACTCCTATACTCGTTAGTTTCAGCTTCGACCTAGAGTTTACATGGCGTAAGCTCGGATCATTGAGCTGGGTTTTTACAGCAAGAACCCGATTTCCTTGCCATCGTCGTCTTCCAATGAAAGTGTGAAAGACGGTCGATGCTTCCAAAGGGTTCTATCTCCAATTGATTACCGAATTTTATTTCTCCGCGATGCGAAGATTACGAACAGTGAGGACCGTTGCTGGTTCTGCGAAAACTCTTCTCACTAGTGCTTCGCCAGCGGTTCGACAACCTTCTCGGTCCTATTTTGCTAATGTGAGTATTGAGAAACTGCAAAAGGAAGCTATTCCTTGTGATTTCCTCAAATGGTGTTCGCTTGGTTTCTTTCGGACTTCGAGATTCGCTACTGGGTTCACCCCATTGCAACCAAAGCCGTTGGATTCTATCATTGATATGGAGAGAGCGAAAGATCGGTCACCGGAGGACCTCGCTTCCATTTGGGATGATTATCACTTGGGAAGAGGTCATATTGGTGCATCAATGAAAGCTAAACTATATCATTTATTGGAACAACGAGCAGCAGACTGCCGATACTTTGTTCTTCCTTTGTGGCGTGGAAGTGGTTATACTAGCATGTTTGTTCAAGTACAAATGCCGCACATCCTTTTCACTGGCCTTGAAGATTACAAGGCAAGAGGAACTCAAGCTGCTCCCTACTTCACCGTGTCCTATTATAAAGAATTTGCAGAGAGCAAGGATATGGTGCTTATTCGAGGTGATATTGTGTTTACAAGCAAGCTCACTGACCCGGAGGCAGAATGGCTTTTAGAGACCACCCAATCGTTCTATCTGAACGATGTTCGGTACAAGCTGGTTGAACGGTTCAACAGACAAACACGTGATTTTGAGTTCAAGGATGTTTTACAAGCACTGGAAATGCCCATTTTATGATTTCTGCGGAACTTAGCAGGCAATAGTGCCCTCTAAGAGGCTCCAACCCGGCTCAGCCTCTTGTTTTGACTTGTTTAGAGAGAACAATCAAATGCTTTATTCATGGTGAGTTCCTAGGATTTGAGAAGTGTTCCCTCCAGAGAGGAAGTATTCCACTAATTAGTCAACAGAGTTTTTCTTTTTCGCATACTGGACTTGACATTTCAATAGTTTTTTCTTTGTGGAGGTTGGGGAACTACAAATTTATAAATTGAATGCCCAGAATTTTCTGATCATTTTATTTGAAGTGTAGGTGAAAATTGGAATCAGACCCATATTTTTCTTCAAAATTCGATCTATACTTTCTACCTTATTTAATTTTCTTCATTTCTCTTGAAATGTTATTGAGATTCGAGATTTTTAGGCATGTAAAAAATCTATGTATTTTGAGGTGTATCAAATACTTTGGGAAGGAAACGCCTTGGAAGCGCAGATCAATGAAGAAAATATTACAGCATTTACTTGAAGGGAACATAAATGAAGAGAATGAAAAT ATGCGAAGATTACGAACAGTGAGGACCGTTGCTGGTTCTGCGAAAACTCTTCTCACTAGTGCTTCGCCAGCGGTTCGACAACCTTCTCGGTCCTATTTTGCTAATGTGAGTATTGAGAAACTGCAAAAGGAAGCTATTCCTTGTGATTTCCTCAAATGGTGTTCGCTTGGTTTCTTTCGGACTTCGAGATTCGCTACTGGGTTCACCCCATTGCAACCAAAGCCGTTGGATTCTATCATTGATATGGAGAGAGCGAAAGATCGGTCACCGGAGGACCTCGCTTCCATTTGGGATGATTATCACTTGGGAAGAGGTCATATTGGTGCATCAATGAAAGCTAAACTATATCATTTATTGGAACAACGAGCAGCAGACTGCCGATACTTTGTTCTTCCTTTGTGGCGTGGAAGTGGTTATACTAGCATGTTTGTTCAAGTACAAATGCCGCACATCCTTTTCACTGGCCTTGAAGATTACAAGGCAAGAGGAACTCAAGCTGCTCCCTACTTCACCGTGTCCTATTATAAAGAATTTGCAGAGAGCAAGGATATGGTGCTTATTCGAGGTGATATTGTGTTTACAAGCAAGCTCACTGACCCGGAGGCAGAATGGCTTTTAGAGACCACCCAATCGTTCTATCTGAACGATGTTCGGTACAAGCTGGTTGAACGGTTCAACAGACAAACACGTGATTTTGAGTTCAAGGATGTTTTACAAGCACTGGAAATGCCCATTTTATGA MRRLRTVRTVAGSAKTLLTSASPAVRQPSRSYFANVSIEKLQKEAIPCDFLKWCSLGFFRTSRFATGFTPLQPKPLDSIIDMERAKDRSPEDLASIWDDYHLGRGHIGASMKAKLYHLLEQRAADCRYFVLPLWRGSGYTSMFVQVQMPHILFTGLEDYKARGTQAAPYFTVSYYKEFAESKDMVLIRGDIVFTSKLTDPEAEWLLETTQSFYLNDVRYKLVERFNRQTRDFEFKDVLQALEMPIL Homology
BLAST of Lcy04g021810 vs. ExPASy Swiss-Prot
Match: Q5TC12 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Homo sapiens OX=9606 GN=ATPAF1 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 6.3e-17 Identity = 71/232 (30.60%), Postives = 108/232 (46.55%), Query Frame = 0
BLAST of Lcy04g021810 vs. ExPASy Swiss-Prot
Match: Q811I0 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Mus musculus OX=10090 GN=Atpaf1 PE=1 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.2e-16 Identity = 62/203 (30.54%), Postives = 97/203 (47.78%), Query Frame = 0
BLAST of Lcy04g021810 vs. ExPASy Swiss-Prot
Match: Q66JD1 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Xenopus tropicalis OX=8364 GN=atpaf1 PE=2 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 7.8e-15 Identity = 60/206 (29.13%), Postives = 99/206 (48.06%), Query Frame = 0
BLAST of Lcy04g021810 vs. ExPASy Swiss-Prot
Match: P87127 (Protein atp11, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=atp11 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 5.2e-11 Identity = 51/181 (28.18%), Postives = 86/181 (47.51%), Query Frame = 0
BLAST of Lcy04g021810 vs. ExPASy TrEMBL
Match: A0A6J1EJC6 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucurbita moschata OX=3662 GN=LOC111433127 PE=3 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 7.3e-125 Identity = 220/243 (90.53%), Postives = 234/243 (96.30%), Query Frame = 0
BLAST of Lcy04g021810 vs. ExPASy TrEMBL
Match: A0A6J1IR42 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucurbita maxima OX=3661 GN=LOC111478614 PE=3 SV=1) HSP 1 Score: 455.7 bits (1171), Expect = 1.2e-124 Identity = 219/243 (90.12%), Postives = 234/243 (96.30%), Query Frame = 0
BLAST of Lcy04g021810 vs. ExPASy TrEMBL
Match: A0A1S3AZK5 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucumis melo OX=3656 GN=LOC103484474 PE=3 SV=1) HSP 1 Score: 450.7 bits (1158), Expect = 4.0e-123 Identity = 218/243 (89.71%), Postives = 231/243 (95.06%), Query Frame = 0
BLAST of Lcy04g021810 vs. ExPASy TrEMBL
Match: A0A6J1CLK5 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Momordica charantia OX=3673 GN=LOC111012283 PE=3 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 6.8e-123 Identity = 220/246 (89.43%), Postives = 234/246 (95.12%), Query Frame = 0
BLAST of Lcy04g021810 vs. ExPASy TrEMBL
Match: A0A5A7UBA1 (ATP synthase mitochondrial F1 complex assembly factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007940 PE=3 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 2.0e-122 Identity = 217/243 (89.30%), Postives = 231/243 (95.06%), Query Frame = 0
BLAST of Lcy04g021810 vs. NCBI nr
Match: XP_038883536.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Benincasa hispida]) HSP 1 Score: 461.5 bits (1186), Expect = 4.7e-126 Identity = 223/243 (91.77%), Postives = 233/243 (95.88%), Query Frame = 0
BLAST of Lcy04g021810 vs. NCBI nr
Match: XP_022925840.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Cucurbita moschata]) HSP 1 Score: 456.4 bits (1173), Expect = 1.5e-124 Identity = 220/243 (90.53%), Postives = 234/243 (96.30%), Query Frame = 0
BLAST of Lcy04g021810 vs. NCBI nr
Match: XP_022978750.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Cucurbita maxima]) HSP 1 Score: 455.7 bits (1171), Expect = 2.6e-124 Identity = 219/243 (90.12%), Postives = 234/243 (96.30%), Query Frame = 0
BLAST of Lcy04g021810 vs. NCBI nr
Match: XP_023544293.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 453.8 bits (1166), Expect = 9.8e-124 Identity = 218/243 (89.71%), Postives = 233/243 (95.88%), Query Frame = 0
BLAST of Lcy04g021810 vs. NCBI nr
Match: KAG7034627.1 (ATP synthase mitochondrial F1 complex assembly factor 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 451.4 bits (1160), Expect = 4.8e-123 Identity = 217/243 (89.30%), Postives = 232/243 (95.47%), Query Frame = 0
BLAST of Lcy04g021810 vs. TAIR 10
Match: AT2G34050.1 (INVOLVED IN: protein complex assembly; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATP11 (InterPro:IPR010591); Has 304 Blast hits to 304 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 112; Plants - 39; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). ) HSP 1 Score: 328.2 bits (840), Expect = 5.8e-90 Identity = 155/246 (63.01%), Postives = 197/246 (80.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|