Lcy04g021620 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCGAGCGGTTGTTGGGACGGTTGATATGGAAGGAGAATGACGTGGCGGAAGATGGGATAAGGGAAGAAAGGGAGTATGGGATTATATGTGGATGGGAGTGGGGATGTGGTGGGGTCCAGTTATCGGGAGGGAGAGCGAATGAGAGATGGGAAGGAGCTGAGTTGTCAAATTCTGAAAGAGTTGGTTTTGGTTTGGATATCTCCTTATCGTCTCCAGTTCCTATGTCTTTCTTTGTGGTTTATATGCCATTTCCCAAAAGTCACACACCATCCATCCATCACGGAAATCAAAGAAATATAGAACTACATTACACTACCGATGTCATCAAAATCAAGCCAAAAAATTAGGACTCATATTCCCTTTGTTCACACTATGATTTGGTCTTTATAAATATATCTTTAATACTTGTAGATTCCACGTCATTTTTTAAATGATATTGACTTGCCAAAATCAAGGTAGTCTTGAGAAGTTATTTAGAAATGTGGTTTGTAAATTTTACCACGTGAGATTGTATTGTGATGGCTAAGAACTTCAATTTAGATAAAGTTGGCTCATTTTGGATAACTTATCTCGCTCTTAACTTATGTGATAGAGATTTTTTTTTTGAGTACATCAACATTTGGGGGGGGAGATTCAAACCTTTGATCTCTTGGTCGATGGTACATGTCAATTACCGCTGAGCTATGCTTGTTTTGTTTATATAAGTTTTAGATGGAATAATATAAGATTATTAACAAAAATTAATACTAGAACTAAACTTGAAACCAATGATTTTTTTTAATTAATATTAAGACTAAAAAAAACAATATTAAATTGTGAGGTTTGTCTAATAGGTCACCAACTTTCAATTTTATGTCAAGAATTTCTTTTTTAGAAAGATGTCTAGACTTTTGACACATTCAAAACTTTGTCAAATTAATGAATCTACTGAAAATAAAATTGAGTTCTAATTTCGTGTTTAGTAGTTTTGTGAATTTTAAAAAAGAAAAATGCCGAACAAGCAATAACTTATGAGATGGAAAGTTTAAAATTCAAAGACTACGATTTGATTATTAAAATGTTTTTGAAATTCATAAGAAATTATTAGATACTTTTTTTTTATCGCTTGAGACTTTAAAGTCCAAATATGTAATTTAATCTGAGAAATCACATTATTTTTTACTTCTATCTAGTGGTAGAATAACTTTTCAATAACTATTGTGGTGGGAAATAGGGGATTACTATTATTATGATAAAGTGAGTATAGCTCAATGATAAGAGACTAGAGATTTGAATTTCCCCACTTCAAATGTTGTTGAACTAAAAATATGATGGAAAAAAACCATTAAGTGTTTATATATTTTATAAAAAACTGTAAAAGAAAAATAAATAAATAAAAAAAAAACAATAGAAAAAAAGGAGAAATTTGTCATGGAAGGAGCCTTTTATGGATTGATGGCCCAGGTGATATCCAACCCAACATGAATTTTAGGACCGACCCAATTCTCAAACCCAATAGATTAGGTAGATGCAACGTCGAGTTCCGACAGTCAGCTTGCCAAGTCAATTTCACTGAAACTCTACAAATTCATATTACAGTAACTGATGGATGAAACTTATATTCATTTTTTTAAAAAAAAAAAAACTTATATTCAATTATTTTAAATAATTAGAATACTTGTATATTATTTTTGTTAGGGTTGAAATATAGCTATACATTAGATTTAGCACATATAGAAAAAATGAAAAGTATATATTTTTCTTCTAAAAAAAACTAATTAGAGTGTCATGTAAAAAGGAAAGGAAAAGAAACAAGAAAAAAAAGAAATAAAATGTATCTGCCAAGTGCCAAAAAGCATAGTTTATCTTTTGACTAACACAATAAAGTTGGGATTAATACTTTTATTAACACTTTTCTTGCGAAGTATTAAAGGTATTTCAAAAACCATCATTTTAAATTTTTTGTTTGAATTCAATATTTCTAAAATAGAGTTCAAAACTTCTACTTTAAAATAAGAATAAATGCTCTAACCACTAGTCAATTTTTATTTTTATTTTTTTGAAACAAAACTCACCACTAGTCAATTTAATTATTAGTTAAGATATGTGGAAACCTCATCTATACGGGAACAACTTATAATTTTTCAATCTTCACACAATGCTTCATCAACATTTGGGGTGAGATATTCGAACCTCTTAACCTCTTGGTTGAGAGTACATGCTAATTACCACTAAGCTATGTTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAATATGTGGGGAGGGAGATTCGAACCACAAATCTTGTAGTTATCAGTACAGCTTTATGTCAGTTGAACTAAGCTCTTGTTGGCAGCTATGTTCGCTTTGACATCTACACATAATGCTGAACTATATTTTAAGTGGCTAAGTCATTATTTTAAGTGATTAATTTTTTTTTTTTGAAAACTACATTTTTTTTAGTTTTCAAAACTTAAATTGGTTTTTGAAAACATTGAAAAGTAGAAAACAAATAAACTTATTAGGTGAAAGTAGTATTATAAGCTTAATTTTAAAAACTAAATAGTTATTGAACTAAATAGTTATTGAGCTATGCTCTTGTTGGCATGGTAACATATGTTTAAATTCACTATTCAATTTAATAAAATGATAAATTTAATATGAAAATCTATATAACTTGTTAAGTTCAAAGGGAAAAAAATATTTTTTTCCCGCTTTATTTTAGTTGAACAAAGGGTGGTAAATAATGTTGAATTGTGTTCTACCAACAACTTTATTTTATTTTATTTTTTGAAATTAAACTACCGACATATTTATTGTTTTTTCTTATTAAGAGAAGAAAATTGGATCAACTTTCTCTCATGTGAAGTGTCGTGTAGTAAATAGTAATTTGATCTTTTTTTTTTTTTTTTTTTTTTTAGAAAATAGTAATTTGATCTTTCACTTTATTAATTTATAAAACATGCATATTTCTGTCCAATGTCAGTTTCAAATGAATCATTTATCTGAATCGATGAATTCGAGAGATATCGAAATGATTATAGAGAAAAAGAAAAGATCATGAAAATCACACAAAGTATCTCCAACTCCAAGTCAGTGCCAGCGAAGGGGAATTTCGGCGAATCACAGAGCAAATCCGCCGGAGCGCGGCGGAGCCGCTAATCTGCAGAGATAGGGAAGCCAATTCCACGGCGTCTGGTCGGAAAAAGAACAAACAACATGCTACAAAAGACGCCAATCCCAACCGGCAAAGACGTCAAAATCTCCTGCGCCTCGTCGGACGGCGCCGGGTAAAAACAGCTCACCACATTCTCATCAAACAGAGCAATGGCGCCAAAAACCAGAATCGACATGAAAGCGTGCAAGAAATCAATAAACCTCAAGCGATACTTGGCCGCAGCCGCAGCCGGCAGCTCGAGCGAGCCGTCGATGACCCAGAGGCCTCTGAAAGTGGCGAATCCATAGCAAACATTGCCCTGGCTGTCTCTGAAACTATCGGTAAAACTCTGAAGAAAACAGGACAATCCACACAAAGCAACGAGCCCCGCCGTGAGGTAGCGAGAAACGGAGTCGCAGTTGCCTTGATTGGTGAAAATTGGGGAAAGAAGCTGAAAGGCGAGCACCGTTCCAGTGGGTAA ATGTGCGAGCGGTTGTTGGGACGGTTGATATGGAAGGAGAATGACGTGGCGGAAGATGGGATAAGGGAAGAAAGGGAGTATGGGATTATATGTGGATGGGAGTGGGGATGTGGTGGGGTCCAGTTATCGGGAGGGAGAGCGAATGAGAGATGGGAAGGAGCTGAGTTGTCAAATTCTGAAAGAGTTGGTTTTGGTTTGGATATCTCCTTATCGTCTCCAGTTCCTATGTCTTTCTTTGTGAGAAAAAGAAAAGATCATGAAAATCACACAAAGTATCTCCAACTCCAAGTCAGTGCCAGCGAAGGGGAATTTCGGCGAATCACAGAGCAAATCCGCCGGAGCGCGGCGGAGCCGCTAATCTGCAGAGATAGGGAAGCCAATTCCACGGCGTCTGGTCGGAAAAAGAACAAACAACATGCTACAAAAGACGCCAATCCCAACCGGCAAAGACGTCAAAATCTCCTGCGCCTCGTCGGACGGCGCCGGGTAAAAACAGCTCACCACATTCTCATCAAACAGAGCAATGGCGCCAAAAACCAGAATCGACATGAAAGCGTGCAAGAAATCAATAAACCTCAAGCGATACTTGGCCGCAGCCGCAGCCGGCAGCTCGAGCGAGCCGTCGATGACCCAGAGGCCTCTGAAAGTGGCGAATCCATAGCAAACATTGCCCTGGCTGTCTCTGAAACTATCGGTAAAACTCTGAAGAAAACAGGACAATCCACACAAAGCAACGAGCCCCGCCGTGAGGTAGCGAGAAACGGAGTCGCAGTTGCCTTGATTGGTGAAAATTGGGGAAAGAAGCTGAAAGGCGAGCACCGTTCCAGTGGGTAA ATGTGCGAGCGGTTGTTGGGACGGTTGATATGGAAGGAGAATGACGTGGCGGAAGATGGGATAAGGGAAGAAAGGGAGTATGGGATTATATGTGGATGGGAGTGGGGATGTGGTGGGGTCCAGTTATCGGGAGGGAGAGCGAATGAGAGATGGGAAGGAGCTGAGTTGTCAAATTCTGAAAGAGTTGGTTTTGGTTTGGATATCTCCTTATCGTCTCCAGTTCCTATGTCTTTCTTTGTGAGAAAAAGAAAAGATCATGAAAATCACACAAAGTATCTCCAACTCCAAGTCAGTGCCAGCGAAGGGGAATTTCGGCGAATCACAGAGCAAATCCGCCGGAGCGCGGCGGAGCCGCTAATCTGCAGAGATAGGGAAGCCAATTCCACGGCGTCTGGTCGGAAAAAGAACAAACAACATGCTACAAAAGACGCCAATCCCAACCGGCAAAGACGTCAAAATCTCCTGCGCCTCGTCGGACGGCGCCGGGTAAAAACAGCTCACCACATTCTCATCAAACAGAGCAATGGCGCCAAAAACCAGAATCGACATGAAAGCGTGCAAGAAATCAATAAACCTCAAGCGATACTTGGCCGCAGCCGCAGCCGGCAGCTCGAGCGAGCCGTCGATGACCCAGAGGCCTCTGAAAGTGGCGAATCCATAGCAAACATTGCCCTGGCTGTCTCTGAAACTATCGGTAAAACTCTGAAGAAAACAGGACAATCCACACAAAGCAACGAGCCCCGCCGTGAGGTAGCGAGAAACGGAGTCGCAGTTGCCTTGATTGGTGAAAATTGGGGAAAGAAGCTGAAAGGCGAGCACCGTTCCAGTGGGTAA MCERLLGRLIWKENDVAEDGIREEREYGIICGWEWGCGGVQLSGGRANERWEGAELSNSERVGFGLDISLSSPVPMSFFVRKRKDHENHTKYLQLQVSASEGEFRRITEQIRRSAAEPLICRDREANSTASGRKKNKQHATKDANPNRQRRQNLLRLVGRRRVKTAHHILIKQSNGAKNQNRHESVQEINKPQAILGRSRSRQLERAVDDPEASESGESIANIALAVSETIGKTLKKTGQSTQSNEPRREVARNGVAVALIGENWGKKLKGEHRSSG Homology
BLAST of Lcy04g021620 vs. ExPASy TrEMBL
Match: A0A0A0KK92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518140 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 6.0e-35 Identity = 89/125 (71.20%), Postives = 98/125 (78.40%), Query Frame = 0
BLAST of Lcy04g021620 vs. ExPASy TrEMBL
Match: A0A2P5CHX1 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_284420 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 3.0e-26 Identity = 77/163 (47.24%), Postives = 107/163 (65.64%), Query Frame = 0
BLAST of Lcy04g021620 vs. ExPASy TrEMBL
Match: A0A2P5FJ60 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_064250 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.1e-12 Identity = 54/148 (36.49%), Postives = 85/148 (57.43%), Query Frame = 0
BLAST of Lcy04g021620 vs. ExPASy TrEMBL
Match: A0A2P5B6P1 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_266830 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.9e-12 Identity = 54/148 (36.49%), Postives = 86/148 (58.11%), Query Frame = 0
BLAST of Lcy04g021620 vs. ExPASy TrEMBL
Match: A0A484M656 (Uncharacterized protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS25873 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 7.4e-09 Identity = 49/140 (35.00%), Postives = 79/140 (56.43%), Query Frame = 0
BLAST of Lcy04g021620 vs. NCBI nr
Match: PON60637.1 (hypothetical protein TorRG33x02_284420 [Trema orientale]) HSP 1 Score: 129.0 bits (323), Expect = 6.2e-26 Identity = 77/163 (47.24%), Postives = 107/163 (65.64%), Query Frame = 0
BLAST of Lcy04g021620 vs. NCBI nr
Match: KAG6581329.1 (Receptor-like protein kinase HSL1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 99.8 bits (247), Expect = 4.0e-17 Identity = 77/165 (46.67%), Postives = 90/165 (54.55%), Query Frame = 0
BLAST of Lcy04g021620 vs. NCBI nr
Match: PON97835.1 (hypothetical protein TorRG33x02_064250 [Trema orientale]) HSP 1 Score: 84.0 bits (206), Expect = 2.3e-12 Identity = 54/148 (36.49%), Postives = 85/148 (57.43%), Query Frame = 0
BLAST of Lcy04g021620 vs. NCBI nr
Match: PON44448.1 (hypothetical protein PanWU01x14_266830 [Parasponia andersonii]) HSP 1 Score: 83.2 bits (204), Expect = 3.9e-12 Identity = 54/148 (36.49%), Postives = 86/148 (58.11%), Query Frame = 0
BLAST of Lcy04g021620 vs. NCBI nr
Match: KAG2576125.1 (hypothetical protein PVAP13_6NG007331 [Panicum virgatum]) HSP 1 Score: 80.5 bits (197), Expect = 2.5e-11 Identity = 49/156 (31.41%), Postives = 92/156 (58.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
|