Lcy04g021350 (gene) Sponge gourd (P93075) v1

Overview
NameLcy04g021350
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr04: 52638741 .. 52650017 (-)
RNA-Seq ExpressionLcy04g021350
SyntenyLcy04g021350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATATTATTTAGGAGCCATTCCTTGCATTCACCAAGATGTAGATGACAATGCCGAGGACGATGAAATGAAGCAGCAAAAGCTTACAATCGTAGCTCTGCCGGCGGAGTTTCGGATTCTGGTGGAGTTTCAGGGAGAGAGCTTTTAAGGAGGAGACCGTAAGAGTACTCGATCGCCTGTTGTTTTGGTCGTAAACATAAATTTCTGTTCCAATATTAGTAGTTTGAATGATTTTCCCTCTTACTTCAAAAGCATTAGATGCACAACTACAATCAATTCAACTATGAACAAAACAAAGTCTCTAATTACAGTGGAAGCCGAACAACTTGCATTTCAACATCCTCTTACTCACATTTTTGACTCGCCATCGCACTCTCCAGTCCATGCAGCGCTTCTTCAAGCAGGTCCTCGTCTGAGAAACCTTCAACAAGTTCATGCTCATATCATCGTTTCCGGATTCCACAGAAGTCGATCCCTCCTCACCAAGCTTCTTTCACTGGTTTGTGCCGCTGGTTCAATCGCCTATGCTCGTCGGCTATTCCCCACTGTCCCAAATCCCGATTTGTTCCTGTTTGATTCCCTCCTGAAAACGACTTCCAAGTTCGGTTTCTCTGTTGATGCCGTCTTGTTTTACCGTCATATGCTTTATTCAGGTGTTCGTCAGTCGAATTACACCTTCACGTCCGTGATCAAAGCCTGTGCAGATCTTTCAGCTCTGAGGTTGGGTAGAGGAATTCATTCTCATGTTATGGTTTGTGGTTATGGTTCTGATATGTATGTTCAGGCTGCACTAATTGCTCTCTATGCCAAAGCTGGTGATATGAAAGTCGCCAAGAAGGTGTTTGATGCAATGCCGCAAAGAACAATTATAGCTTGGAATTCACTTATATCAGGGTACGAGCAAAATGGATTACCGACAGAAGCAATGGGTTTATTTCACCTGATGTTGGAGTCGGGCTTTCAACCTGATCCAGCGACAATAGTGAGCTTATTGTCTTCCTGTTCTCAGCTGGGGGCTCTTGATTTTGGTTGCTGGTTGCATGATTATGCTAATAGTAATGGTTTTGATCTGAACGTGGTTCTTGGTACTTCATTGATTAACATGTACACTAGATGTGGGAATGTAAGCAAAGCGCGGGAAGTTTTTGACTCCATGAAGGAAAGAAATGTTGTTACCTGGACAGCCATGATTTCAGGGTACGGGATGCATGGTTATGGTGAGCAAGCAATGAAGCTTTTTGGTGAAATGAGAGCTTATGGTCCTCGTCCTAACAATATCACATTCGTTGCAGTCTTGTCTGCATGTGCTCATTCAGGGTTGATTGGTGATGGTCGTCGGGCATTTGCAAGCATGAAGGATGTATATGGGTTAGTTCCAGGAGTAGAACATCATGTCTGCATGGTAGATATGTTTGGACGTGCTGGATTGCTCAATGATGCTTATCAATTTATCAAAAATTTTCTTCCTGAAGAGCCAGGTCCGGCAGTTTGGACCTCAATGCTTGGGGCTTGCAGAATGCATAAAAATTTTGACCTTGGAGTTAAGGTTGCAGAGCATGTTTTAGCAGTTGAACCAGAAAACCCCGGTCACTATGTAATGCTTTCCAACATATATGCACTGGCGGGTAGAATGGATCGAGTGGAGATGGTACGAAACATGATGATTAGACGACGCCTAAAGAAGCAAGTTGGTTATAGCACCATAGAGATCAATCGGAAGACCTATTTGTTTAGCATGGGTGACAAGTCTCATCCTCAGACAAATACAATCTATAGGTATTTAGATGAATTAATGGGTCGTTGTAGTGAATCAGGTTATGTACCAGCACCAGAGTCCTTGATGCATGATTTGGAAGAAGAGGAAAGGGATTATGCCCTTAGATATCACAGTGAGAAGCTTGCACTAGCATTTGGTTTACTTAAAACCAGTCAAGGTGAGACTATTAGGATTGTAAAGAACCTTCGGATATGTGAGGATTGTCATTCAGCTATTAAACACATCTCTATTATTGCGGATAGAGAAATAATTGTTAGGGATAAATTTCGTTTTCACCACTTCAAAGGTGGTGCATGTTCTTGTCTTGATTATTGGTGATAATTTCCGTTTATAGTCTTCCGCTTGAGTATTCTAGCTGTTGCCAAGAGTTCATTGGATCTATTAGCTAATCCACCACCAGTCGTGGACATGTCGCTGATTTTTCTAATTGATGATCTATTCTGTCACTAGAGCCCCTCAGCGTTTATAAATAGCTAGGTGAGCTGGTTATTAACTTGATCATTTCTCAGACTGTCAAGTTCTTTCTTTATTCAATGATTGATCCCTAAAGCAGGTACCTACTAGGTGTTCCTATTCATTTGAAAACTGAAGGAGCATCAGACAAGATCTCTTTGGTAGTTTGGAAAGTGCAGACGCTAATTGTTCTTCTAATTACCTTTTGAAAGCTGAAATGTACTGGTAAATCTTTTGTGCAGAGCCGCAGGTCTTAAGCAGCTTATGTTCTTTGATTCAAGCTTCAACACCAGAGCTTGGCAGATTTATATAGTCATGCCGTCAAAAGGTTCTTTACACGAAGTCTTAGAACTAGCACAGACCAACGCTTATCAGATGGCGATTAGCTCTAAAATAGGGAACTTGCAAGAATCTAATTTTTTAAAAGAAAGATTACGGAAAAAAAAAATTGGTAATGATTCATCTCTTTTGATTTGATTAGCCATCATACAAACTTGATTTTCTGCGGAGAAGCAGGTAGCTTCTGCGCAAAGCACTAAATTTTTTATGCAGCATTGCGGGCTGAGGGAAAGAAGTTTATTAGCTCTGAGAAATTTTCCGATTCTTCGGTAACTTTCAAATAAAATGGATGTAGGACCTGTGAATATTTTTGTTCTTGGCATCAACATGATCTCAAAAAATGTTGACATGAATCACTACCAAGTGAACACAAATTCCTGCTTCTCGTGTAGCTCTGGTTTTTGAGGGAGGCGGAAGCAACTGCTATTGGCTACAAAGCATGATGAGTCAACTGGGTTTTTAAGCCTTACGAGCCTTGTTTGGCTGTGTCAGGTTTACATCTGTGCCATTTCATACTTAGATTCTTGAATTGGTGGAAGTGGTTATCGTTGACATTTATCATCCATGCACCTTTTCTTTTGGTTGTTCTTGCAAATCAGTTATTGCCGGTTTCAAGTTCAGCCATGGAAACTGCATTTGTTCTGGCATGCAAAAACTCTTTGGGGTGAACGATGAGGTGATTGACTCTTATATATTCCTGCAATTGGTTCTTTTAGTTTTTCGTAATTTAAAATTTGCATCCTGACTTTTGTCTCTTCTCCATTTAGTCTTTTTGTTCTCGAGCTTTTCAAATTCATTATATACTTAGTACTTTGAAACAAGCTTTTCATCCAAACAAAAAACTCTTCGTTCATTTTTCCACTAAGTAAAAGCTTTGATGACGTGCAGGTGGTGGTTTGAATACCTGTTAGTGATGTTAATTTTGTATTGAGTGCTTTGGGTGTAGCTGGGGCTTCAAGAAGCAAACATTGGAATTCAAACTGCGTGTCATAATCCATAATTAAATATTGTCTTGCATTCCTTCTGTTATTTCATTGTTTCTATGTCATAAATTACAATTCTGCTGTGTTTTTATGTTGCCTTAATGGGCATAAAGATTCCACACGACTTTACCTTTTCGATGGGCATAAAGATTCCTCACGGCTTTACCTTTTCAGCCTTTTCCATCAAGTTACTGAAGCTCTAAAACGTTAACATCTCCATAAGTTGAGGGATCGTACAACAGTCTGCTGTGTTTTTAATTGGTCCTAATTGGCCTAAACATTCCACGGCTATACTTTTTCCATTCAGTTACTGAAGCTCAAAATTTTTAATTTCTCAATAAGTTGAAGGATCATAGAACAGTTTATTGATGGCCAAGTCCAAAATGCACCTAAATGTGATGATTGTTTTTTCATTTATTGGAATTTGCAGCTTCGCCTTAAATTTTCTCATGGTAATTCTATATACAATATTGCTTCTATCTACGGTCTTATTGATAATTATCAACTGTCAAGTGTCAGATGTATAAAATTAAGGAATACTTTGCATCTCGGTTGGCTTGGATATTAGTTTGATCAATTTGTTATAACCAGGTTGGTTATTCTGTTCATTACAAGAAGTTGTAACCTGTTAATATAATTATTTTCTTGTTACTTTTGTTATCTCCCTCTCTATATATTCAGAGGAGAACTTTCATGTAATTAAACGTGAATGTGTTTTAATGTCATATAAAACTCTCTTTCTCCTCATCTGCTTACTAAACGTGATATTGGATGCTGTTCTGTTGATTTCTCCAATTTCTCCATGTTTACTGTTATTCACTGCCCAGTTGGGGATTCAACTTTAAAGCAAGTCTTGGGAGGGACTTCGATAATCTAGGGTTGTATTTCCTCACCCTTCAATTGATACTGACATTATCTTTATATTTTATTTGAAATAGGCTTTTAAGAAGTTTCTTTTTCCTTTTAAATTTTTCCCCTAATATCTGTTGCAGTTGATGTTCAATAAAGTTCTCTTGCTTAGGCTCAACCTCACCAGACAATTGTAGATAGGCTAACACTGCAGATGTAGAAGCTGCCCAAGCGGTTGTTGAGGAACATGTAAGAATAGTAACTCATTGTCTATTGCAATGTACATTTAAAAGATGTTTTCTAACATGGTTCTTTATGCTTGCACAACTACTAAACTTGTAGTCTTAGCCTTGCCTCTCATGTTAATATTGGTTAAGACAACACAGTTACCGATAAAGAAATATCTAGTTGCGATATTAAAAGATATTAAAAGAAACACCCACAATAGTATGATATCAAAAGATCTAGGAAAATGTTCTAGTCTGGAGATTTTATTACCTGTCCGCAAGATGGCTAGTAAGCATTTATAGTAGGATTTGCTGCTTAAAGGGATCGTGGAATGACAATGGGGTTTGGTAGTAGGACTGAGTTAATCTGCAACCCTTTCTCGTGACAAAGGTATCGTTTAGTGTGCGTTAGTATTTAAATAAAGTTCAGTATATTTAGTAACCATTCTGCTCTCATCTTGTATAATATTTTCAGACTCTGATTAGTTTTATAGTGTAAGCACCTTTCTGCCTTCGCCATTTTTTACCCCAAAAACTTCGTTGGCTCGTCTTTTTGGATATAGACATCCTTGAAATTCTTCTCTCCAAACACCTGAATGATGATAGCCTTTTCCAAGTTATGTGATGACCTTTCTTGGGTGGTATGTTGCATTATTGTGGGAATTAACAAAGCTGACAGTGATGATAGCGCATAGGCATAAAGAAGGTATTAACAAACCACTCAAGGTCAGATAATTTCATAAAAATGACTTAGTTTTTAACTAGAACGAAGTCAGAGAGTAAAATATTATTATAAGATAAATCAAATATTAAGGCTTTACTGATCTGTCATTGAAGGCTTTTGATAAACATCAAGAATGTGCCATTTCTAGAAAGCCACATTGGACAACTCTTGGGGTTGAGGGTTTAGGGTACTTGGTATATATGGTAAGAAATTCGGACCTGGGTTGAAAGGTGTAGATGAAAAGTTTAATAATTGAGTTGTCTCTCAAAACTGACATTGGGATGTATGAATATCTCCGTGGAGTAGTGGGGTGGGACCCGATACAACGGATTGAAAACAAAAAAGTGCCATTTCCGTAAAGTGTAAGCTGAGTGAAGGTAGGGCCATGGATGTTGTTTAAATTGATTCGAGGCAGTGATATTGATTTTGTTACAGCTAATAAGCCTTAATTATTAAAGTGAGAACTGAGTTTGGGGAGATTTAAGAGGCAATGTGGACTTTGGAGAGAATCCATCTAGAAAGTGGCAAGCTTTAAAAAGAGAGTCCACTTAGGTGGACGGATTCGTTGAAAGGTTGGGCACATGGAAAAGGGAAAGGTACTTTTGGGTTTGTTAGACAAGTTCCTGGTATCTTCTTTTCGAGATTTATTTTTTGCCACTTGGTTCCCTCTTTGGGCTGAACTTTGACATTCAAATTCAAAGGGACTGAGGCATTGATCTTCTTAGCTAGTTTTTAGAATTGTTAGGCTAGTAAATTGAGTTTCTATATCATGGAATTTGAAAGTCAAAGTTACATTTAGTATGTAAGTGTTCTTTTTTTTCAAAAAAAAATCATGAGTTTGTCAATCTCATAATCTTTTTGAACTCAAGCTTTTGAAATTTACCTTGTAGTGTTATACTACCTTTTACAAGCTTCGACCTATGATAAAACTCAAGTCTGCAATTTATTTTTTTGCACGTTCAGAGCAGGTACTAAACAAATTTAGGCTTTACAATCTCAAACTCTTGAACCGTACACCTTCTTTGACAAACTTTGTCTAAGGCAATGACCACGTTTGTCTAGCCGAAGATATTCACTAAGGAAATACTATCGGATGAAACCATGCAGATCTCAGTCCCATATCATGAATTTCTGAAATCCTTCCAAACACAAGGAGATATATTTAGCCCTACCTTTTTATCATATTTCTACTGCCTATTATAAATAATCATTATCTTTGAATATTAGGGAAAATTCCGATTGATTAATTCGAAGCAATGGAATTGGTTTGGTTGAAAAGGAAAAATTATAAACTTTTGGTAAATGGAGAGGACATGGTTTTGAAATTGAAAGGTTGGGTTAAAGATAATGGAAAGAGCAATAATACATTCCCACTATCTCCAACTCCAACAGGAAGAGGCAATTGGATCAAAAGTTCTCACTTTAATATCAGCTTAATTAATGGACCAAGCAAACCACACAGTAGTTTGCCTCTTCAGTTGACTAATGGCTCCAACCTTCATTTATATATACATATTTATTTATTTATTTATATACTGAATTTTCCACTTTCCACAACCGCCCTCTTTTTTTCTCACCCTGACTTTATTTGTTAAGATGCCACCAATCCACGGTAGTTAGAGGTTTCTCCCTAAAAGTTTTGTAGAGTTTATTATATTTATTAGGTAAAAATACATTTTTAATCTCGAAATGTTTTGATCCATTTATTGTTAGAGTCTAGACTTCCAATGATTAAGTCCACGTCATTAGAGGAGGGAGAATGATCCAATAATCTACCATTTGAATTGATACATTCAATTTATCACAAATAAGATAGATTATTTGTTTAAAAATTAATGGAGATTATTATTTAGATACAAATCCTAGGAATATTTATTAACTTTGTTCCTGATTGTTATACTAGGGGTTTTATTATGTTTTGATCTTTATGCCTTCTTATACCCGTTTTAATCTTACTCTTGGACGTAATAGTTAAGTTTACAACGGGAAGAGAGACAATAATTTAGAGATTTGCTATTTGAATTCATGTATCCAATGCTAAAACTCCAAGCCCCAAATTTGTTGCCATTAGTTGTTGAGTTGACTATCAAAACCACCTGATAAAGCACTTTATTGGTGTTAAGTTGAATAATTTACGGCCGTAGAATAAAGTTTTAATTATGATGATCTGGCCACTATAGTGCTACCGAGCTAAAGTACTAAAATCTTAATGTATTTAAATGGAGTCTATTTAAAGGACAGTTGGAACTTGCCAATGGAATAAAATTGTGACCAAAAGACGTAAACTTTGATTGTTTTGTATCAGGATTAGAAATGCCGTCAAATTCTTCCTTGGGAGTGTTTAGGCCAGGAAGGCCTGGAGTTTTTTAATTGTTTGAAATATTTAGATCCACTTTCAGAAAGAAAAGTGGGTTTAAATGGAGTCACTTTCTTTGCCACTTAAAGAATTCTTTTTCCTTCTTTATACTTAATATCGGACCTCACTACTTTGCATGATTTCCACTTTGATTTAAAATAGGGTTATGCCTCCAACACAGTTGTTCTTCCTCTCCACAGTTCTTCCACTAGTTCCTTTCTTAATTACGCCAATTTGGTCAGCACCACAACAGCAATTTCTCTCCCCTTTTATTTTTGTTATATGCTTGCCACTAGATTTCCTGGATTCTTCTTGTTAAGTATATACCTAGAGTTTATGGATTTAAGCTTTTAGATTTAATGGTTATTTATCATGGTATTAAAGCAGAGTTTTCAAATTCAAATCTTATTATACCATTTTATTTTTAGCTGATATTAATAGTTCATATGTTGGATTTCGTGAATCAAATAAATATGACTAAATATGCCCGAATTTATCAATATGAGCTTTTAGATTTGGAGATGATTTAATATTTCTTTATGTGTCATGAATGAAAGATGAACTACAGTAGATTGGTCTATGTTTTGCTGTCCTATGCAAGCAACCATTATCTTCTTTCCAAGAGAGAGATTCATGAAAATGGCTTTCCAAATTTCTGTTTAATAGTCCAACCAACACATGAGAAAAAAAATCAAAATGTGGATGGGAGACTTTTATAAGAGAGAGTTGGAAGTGATCTGTAACTTGACAATTGGTCTATGTTGTGCACTTGTGCTGTCCCATAGATACCAACAAACCAATATCCTCCACAAACTTTGTTTGATAAAGCTTTGTTGCAGCTTTAAAAAGAGAGAGAGAAAGTACAAACCATGTTAGCAGCAAGAGTATTAGACTTTAAAGGTTCTGAAGATAGGAAATAACCTTAGCTGTGAAAACAACTGAAGTTTATGCATAGATCTGGCAGACAAAAAGAAACTAGACACTTTTACTACCAATATAGGTAGATTCGTTTACTTTAACAAGTCCTCCTTTCCAAAGTACAATTTACTGTGACAACTTCTCTTTTAAGTAATGGGGATTGTCTCGTAGAAGTTGGATGAGACCAAAAATAAAACAACAGGCAAGTTCAATCTCCTCATGGATCGGAGTGGGAAGATTGTTTTGATAATTTGTTTTGTATAACAACTTTTCGAAAACCATTTTAAAGGGGAGGGAAAGAGAGAAAATTTTAACTTTTGACAATCAAAATTGTGGGGATCAGGAATTATAATGATTGAGAAAACTTTTCTTAACATTCTCCATTCTGATATGGGTTTGAATTCCTGATCAATTTCGTACCTCTGGGTTAAGTTAAGTTACATTTGGTCTTTTTTTATGGATTCTCTGTGCCTCTCTTTTAACATGTTAAGCTTGAAGAAAAGTTACCTCTCTCTCTCTCTCTTGTTACAGATGGAAACGTGGCAGAGTTGTGGCTTTCTTTTTCCAGAGGATCACTAGAATCTGGGAGCAGATGGATTCACAGCCACAACATTAAAAAAGGTACGAACAAATATCACATTGAAATCCACCCAAAAAGTGAAAAGGGAATGGTGAAGTTCATAAAATAATAATACAAGTGGGAGCAAATGCCAATGCGTTGTTACAATTGAACCCACCACCAGATTTCAAATTATGCCTCAATAACATTAAATAAAAGTTCCATTGTGTTGCTTGCTGATTTTGCTTCTAAGCTTATCCAGTTTCTTTCTTTCCTTTTTGCATTTGGAAAAGGATCTGGGATTGCTAGCAAGGTCAAATATGCACTTCAAAACTGTTGCTTTTGGAATGGGCCTTACTTCCATTCTTTGATAAACAATATCCTAAAAGCTTTCTTATCTAGTTGAAATTGATAAGACTTTGATCAAAGTCTACATTGTCTATGATATTTTATTTGTTGGTACAAAACATTGTGTGTAAAATCTAAAAGAAATTAGCTTGCATGAGAGATTTACATGATTTAAGGTTCATATATAATAAATCGGTATCATTACAAGAGATAAGGATGATTTGTCATTGTGATAGATTAACATACATGTGGTATTCATAAAAGAAATCATTTTAGTTCATACTCTTTCTTAGTTTTGTTGTTGAATATCATATTGTCTAAGATAAGATCATAAAATGATTGGATGACAATAAAATATTATGTGCCATAAATATTAAACAGAAGAAAATAATTGAGCTTGGGAGGAGGAAACATTACTTTTATACTGTTTCTTTCTCTATGTAAAAGAAAAGGCAATTGATATATATATATATATAGACATACACATACACACATTCCAAGGGATTGATTAAAAAAAAAAAAAAAAAAAACCTTTGCAATGTTTAGAATTAGATCACTATTTACCTAAGCAAGGTTTGATAACTATTTATTATTATTTTTTAAACGAATATTATTTTTATTATTTTTATTATTTAATAGTGAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAAATTTGAATAGTGAAGTTGTTTGATAACTAATTCGCCAAAAAGAACAAGTAATAAAAAAAATATTTCAGTTTTTCAAATTTTCATTTTTTTTTTCTGACACTAGTTTTTTCCTCTTTTGACATGTCCCTCTCACTAATTTCTCTCTCATTTTTTTTTCCCTTTCTCTAACTTTCTCTAAAAAAATCCTCTATCTTTCTTAAATTTTGATCTCTATTTCTTTTATAACATTTCTCCTACATTTCATCTCTAAAATTCTAGTATATTTATTAAAGTTCTCTTTGATATTTCTCCCTAAAATTTCATACTCTATAATTTTTATTTTTCTTTCTCTAGTTTATTTTTCTCCCAAACATATAAATCCCTAATTTTTTACTCGAGATAACTTTTGTTTATCTTTTTTTTTTTTTTAAATTATTTTTCATTTTCTAACAGTTTTTTTTTTTAAATGTGGGTGGGAGATTCGAATACCATTCATAACTAATACAAGTTTATGTCAGTTGAGCTATGCTATATTGGCTTTTTGGGTTACACTTTGACTTCAGTCTCTCTTTCATAATTTTCTTTTTTTTTTCCTCTCTAAAATTTCTTTCTTTCTCTAAGTAATATTCCCTCGTCTCTCACTATTTAATTTTTCTTTCTACAACATTTCTTTTGCTTTATTCAACTAATATTCTCTTCTTTTGTTCTCTATCTTTTTCTCAAGAAATGTTATCTCCAAACTCCGTAAACTTTTATTTTCGAGCTCTATATATTTTTATTTCTTTAAAATATCTATCTATTCTCTCTAACTTATAAAAAAGTATCAAATCTATTTGTTTTTTTTTTTTTTTTTGTTATTTAAAAACAAAGGCAAGATTCTTTTTTGTATTTTAACTATTAAAAAAAAAAGTCTATATTACAGATTTTTAACTTGAAATAATTTTTTTTTTTTTTTTGACAACATGTAGGGAGGGGGATTCGAACCACATACCTTGTGGTTATCAGTACTACTTTATGACAGTTGAGTTAAGCTCTTGTCGGCACTTGAAATAGTGTTGTAATTTAGAATAGG

mRNA sequence

CATATTATTTAGGAGCCATTCCTTGCATTCACCAAGATGTAGATGACAATGCCGAGGACGATGAAATGAAGCAGCAAAAGCTTACAATCGTAGCTCTGCCGGCGGAGTTTCGGATTCTGGTGGAGTTTCAGGGAGAGAGCTTTTAAGGAGGAGACCGTAAGAGTACTCGATCGCCTGTTGTTTTGGTCGTAAACATAAATTTCTGTTCCAATATTAGTAGTTTGAATGATTTTCCCTCTTACTTCAAAAGCATTAGATGCACAACTACAATCAATTCAACTATGAACAAAACAAAGTCTCTAATTACAGTGGAAGCCGAACAACTTGCATTTCAACATCCTCTTACTCACATTTTTGACTCGCCATCGCACTCTCCAGTCCATGCAGCGCTTCTTCAAGCAGGTCCTCGTCTGAGAAACCTTCAACAAGTTCATGCTCATATCATCGTTTCCGGATTCCACAGAAGTCGATCCCTCCTCACCAAGCTTCTTTCACTGGTTTGTGCCGCTGGTTCAATCGCCTATGCTCGTCGGCTATTCCCCACTGTCCCAAATCCCGATTTGTTCCTGTTTGATTCCCTCCTGAAAACGACTTCCAAGTTCGGTTTCTCTGTTGATGCCGTCTTGTTTTACCGTCATATGCTTTATTCAGGTGTTCGTCAGTCGAATTACACCTTCACGTCCGTGATCAAAGCCTGTGCAGATCTTTCAGCTCTGAGGTTGGGTAGAGGAATTCATTCTCATGTTATGGTTTGTGGTTATGGTTCTGATATGTATGTTCAGGCTGCACTAATTGCTCTCTATGCCAAAGCTGGTGATATGAAAGTCGCCAAGAAGGTGTTTGATGCAATGCCGCAAAGAACAATTATAGCTTGGAATTCACTTATATCAGGGTACGAGCAAAATGGATTACCGACAGAAGCAATGGGTTTATTTCACCTGATGTTGGAGTCGGGCTTTCAACCTGATCCAGCGACAATAGTGAGCTTATTGTCTTCCTGTTCTCAGCTGGGGGCTCTTGATTTTGGTTGCTGGTTGCATGATTATGCTAATAGTAATGGTTTTGATCTGAACGTGGTTCTTGGTACTTCATTGATTAACATGTACACTAGATGTGGGAATGTAAGCAAAGCGCGGGAAGTTTTTGACTCCATGAAGGAAAGAAATGTTGTTACCTGGACAGCCATGATTTCAGGGTACGGGATGCATGGTTATGGTGAGCAAGCAATGAAGCTTTTTGGTGAAATGAGAGCTTATGGTCCTCGTCCTAACAATATCACATTCGTTGCAGTCTTGTCTGCATGTGCTCATTCAGGGTTGATTGGTGATGGTCGTCGGGCATTTGCAAGCATGAAGGATGTATATGGGTTAGTTCCAGGAGTAGAACATCATGTCTGCATGGTAGATATGTTTGGACGTGCTGGATTGCTCAATGATGCTTATCAATTTATCAAAAATTTTCTTCCTGAAGAGCCAGGTCCGGCAGTTTGGACCTCAATGCTTGGGGCTTGCAGAATGCATAAAAATTTTGACCTTGGAGTTAAGGTTGCAGAGCATGTTTTAGCAGTTGAACCAGAAAACCCCGGTCACTATGTAATGCTTTCCAACATATATGCACTGGCGGGTAGAATGGATCGAGTGGAGATGGTACGAAACATGATGATTAGACGACGCCTAAAGAAGCAAGTTGGTTATAGCACCATAGAGATCAATCGGAAGACCTATTTGTTTAGCATGGGTGACAAGTCTCATCCTCAGACAAATACAATCTATAGGTATTTAGATGAATTAATGGGTCGTTGTAGTGAATCAGGTTATGTACCAGCACCAGAGTCCTTGATGCATGATTTGGAAGAAGAGGAAAGGGATTATGCCCTTAGATATCACAGTGAGAAGCTTGCACTAGCATTTGGTTTACTTAAAACCAGTCAAGGTGAGACTATTAGGATTGTAAAGAACCTTCGGATATGTGAGGATTGTCATTCAGCTATTAAACACATCTCTATTATTGCGGATAGAGAAATAATTGTTAGGGATAAATTTCGTTTTCACCACTTCAAAGGTGGTGCATGTTCTTGTCTTGATTATTGGTGATAATTTCCGTTTATAGTCTTCCGCTTGAGTATTCTAGCTGTTGCCAAGAGTTCATTGGATCTATTAGCTAATCCACCACCAGTCGTGGACATGTCGCTGATTTTTCTAATTGATGATCTATTCTGTCACTAGAGCCCCTCAGCGTTTATAAATAGCTAGGTGAGCTGGTTATTAACTTGATCATTTCTCAGACTGTCAAGTTCTTTCTTTATTCAATGATTGATCCCTAAAGCAGGTACCTACTAGGTGTTCCTATTCATTTGAAAACTGAAGGAGCATCAGACAAGATCTCTTTGGTAGTTTGGAAAGTGCAGACGCTAATTGTTCTTCTAATTACCTTTTGAAAGCTGAAATGTACTGGTAAATCTTTTGTGCAGAGCCGCAGGTCTTAAGCAGCTTATGTTCTTTGATTCAAGCTTCAACACCAGAGCTTGGCAGATTTATATAGTCATGCCGTCAAAAGGTTCTTTACACGAAGTCTTAGAACTAGCACAGACCAACGCTTATCAGATGGCGATTAGCTCTAAAATAGGGAACTTGCAAGAATCTAATTTTTTAAAAGAAAGATTACGGAAAAAAAAAATTGGTAATGATTCATCTCTTTTGATTTGATTAGCCATCATACAAACTTGATTTTCTGCGGAGAAGCAGGTAGCTTCTGCGCAAAGCACTAAATTTTTTATGCAGCATTGCGGGCTGAGGGAAAGAAGTTTATTAGCTCTGAGAAATTTTCCGATTCTTCGGTAACTTTCAAATAAAATGGATGTAGGACCTGTGAATATTTTTGTTCTTGGCATCAACATGATCTCAAAAAATGTTGACATGAATCACTACCAAGTGAACACAAATTCCTGCTTCTCGTGTAGCTCTGGTTTTTGAGGGAGGCGGAAGCAACTGCTATTGGCTACAAAGCATGATGAGTCAACTGGGTTTTTAAGCCTTACGAGCCTTGTTTGGCTGTGTCAGGTTTACATCTGTGCCATTTCATACTTAGATTCTTGAATTGGTGGAAGTGGTTATCGTTGACATTTATCATCCATGCACCTTTTCTTTTGGTTGTTCTTGCAAATCAGTTATTGCCGGTTTCAAGTTCAGCCATGGAAACTGCATTTGTTCTGGCATGCAAAAACTCTTTGGGGTGAACGATGAGGTGATTGACTCTTATATATTCCTGCAATTGGTTCTTTTAGTTTTTCGTAATTTAAAATTTGCATCCTGACTTTTGTCTCTTCTCCATTTAGTCTTTTTGTTCTCGAGCTTTTCAAATTCATTATATACTTAGTACTTTGAAACAAGCTTTTCATCCAAACAAAAAACTCTTCGTTCATTTTTCCACTAAGTAAAAGCTTTGATGACGTGCAGGTGGTGGTTTGAATACCTGTTAGTGATGTTAATTTTGTATTGAGTGCTTTGGGTGTAGCTGGGGCTTCAAGAAGCAAACATTGGAATTCAAACTGCGTGTCATAATCCATAATTAAATATTGTCTTGCATTCCTTCTGTTATTTCATTGTTTCTATGTCATAAATTACAATTCTGCTGTGTTTTTATGTTGCCTTAATGGGCATAAAGATTCCACACGACTTTACCTTTTCGATGGGCATAAAGATTCCTCACGGCTTTACCTTTTCAGCCTTTTCCATCAAGTTACTGAAGCTCTAAAACGTTAACATCTCCATAAGTTGAGGGATCGTACAACAGTCTGCTGTGTTTTTAATTGGTCCTAATTGGCCTAAACATTCCACGGCTATACTTTTTCCATTCAGTTACTGAAGCTCAAAATTTTTAATTTCTCAATAAGTTGAAGGATCATAGAACAGTTTATTGATGGCCAAGTCCAAAATGCACCTAAATGTGATGATTGTTTTTTCATTTATTGGAATTTGCAGCTTCGCCTTAAATTTTCTCATGGTAATTCTATATACAATATTGCTTCTATCTACGGTCTTATTGATAATTATCAACTGTCAAGTGTCAGATGTATAAAATTAAGGAATACTTTGCATCTCGGTTGGCTTGGATATTAGTTTGATCAATTTGTTATAACCAGGTTGGTTATTCTGTTCATTACAAGAAGTTGTAACCTGTTAATATAATTATTTTCTTGTTACTTTTGTTATCTCCCTCTCTATATATTCAGAGGAGAACTTTCATGTAATTAAACGTGAATGTGTTTTAATGTCATATAAAACTCTCTTTCTCCTCATCTGCTTACTAAACGTGATATTGGATGCTGTTCTGTTGATTTCTCCAATTTCTCCATGTTTACTGTTATTCACTGCCCAGTTGGGGATTCAACTTTAAAGCAAGTCTTGGGAGGGACTTCGATAATCTAGGGTTGTATTTCCTCACCCTTCAATTGATACTGACATTATCTTTATATTTTATTTGAAATAGGCTTTTAAGAAGTTTCTTTTTCCTTTTAAATTTTTCCCCTAATATCTGTTGCAGTTGATGTTCAATAAAGTTCTCTTGCTTAGGCTCAACCTCACCAGACAATTGTAGATAGGCTAACACTGCAGATGTAGAAGCTGCCCAAGCGGTTGTTGAGGAACATATGGAAACGTGGCAGAGTTGTGGCTTTCTTTTTCCAGAGGATCACTAGAATCTGGGAGCAGATGGATTCACAGCCACAACATTAAAAAAGGGAGGGGGATTCGAACCACATACCTTGTGGTTATCAGTACTACTTTATGACAGTTGAGTTAAGCTCTTGTCGGCACTTGAAATAGTGTTGTAATTTAGAATAGG

Coding sequence (CDS)

ATGAACAAAACAAAGTCTCTAATTACAGTGGAAGCCGAACAACTTGCATTTCAACATCCTCTTACTCACATTTTTGACTCGCCATCGCACTCTCCAGTCCATGCAGCGCTTCTTCAAGCAGGTCCTCGTCTGAGAAACCTTCAACAAGTTCATGCTCATATCATCGTTTCCGGATTCCACAGAAGTCGATCCCTCCTCACCAAGCTTCTTTCACTGGTTTGTGCCGCTGGTTCAATCGCCTATGCTCGTCGGCTATTCCCCACTGTCCCAAATCCCGATTTGTTCCTGTTTGATTCCCTCCTGAAAACGACTTCCAAGTTCGGTTTCTCTGTTGATGCCGTCTTGTTTTACCGTCATATGCTTTATTCAGGTGTTCGTCAGTCGAATTACACCTTCACGTCCGTGATCAAAGCCTGTGCAGATCTTTCAGCTCTGAGGTTGGGTAGAGGAATTCATTCTCATGTTATGGTTTGTGGTTATGGTTCTGATATGTATGTTCAGGCTGCACTAATTGCTCTCTATGCCAAAGCTGGTGATATGAAAGTCGCCAAGAAGGTGTTTGATGCAATGCCGCAAAGAACAATTATAGCTTGGAATTCACTTATATCAGGGTACGAGCAAAATGGATTACCGACAGAAGCAATGGGTTTATTTCACCTGATGTTGGAGTCGGGCTTTCAACCTGATCCAGCGACAATAGTGAGCTTATTGTCTTCCTGTTCTCAGCTGGGGGCTCTTGATTTTGGTTGCTGGTTGCATGATTATGCTAATAGTAATGGTTTTGATCTGAACGTGGTTCTTGGTACTTCATTGATTAACATGTACACTAGATGTGGGAATGTAAGCAAAGCGCGGGAAGTTTTTGACTCCATGAAGGAAAGAAATGTTGTTACCTGGACAGCCATGATTTCAGGGTACGGGATGCATGGTTATGGTGAGCAAGCAATGAAGCTTTTTGGTGAAATGAGAGCTTATGGTCCTCGTCCTAACAATATCACATTCGTTGCAGTCTTGTCTGCATGTGCTCATTCAGGGTTGATTGGTGATGGTCGTCGGGCATTTGCAAGCATGAAGGATGTATATGGGTTAGTTCCAGGAGTAGAACATCATGTCTGCATGGTAGATATGTTTGGACGTGCTGGATTGCTCAATGATGCTTATCAATTTATCAAAAATTTTCTTCCTGAAGAGCCAGGTCCGGCAGTTTGGACCTCAATGCTTGGGGCTTGCAGAATGCATAAAAATTTTGACCTTGGAGTTAAGGTTGCAGAGCATGTTTTAGCAGTTGAACCAGAAAACCCCGGTCACTATGTAATGCTTTCCAACATATATGCACTGGCGGGTAGAATGGATCGAGTGGAGATGGTACGAAACATGATGATTAGACGACGCCTAAAGAAGCAAGTTGGTTATAGCACCATAGAGATCAATCGGAAGACCTATTTGTTTAGCATGGGTGACAAGTCTCATCCTCAGACAAATACAATCTATAGGTATTTAGATGAATTAATGGGTCGTTGTAGTGAATCAGGTTATGTACCAGCACCAGAGTCCTTGATGCATGATTTGGAAGAAGAGGAAAGGGATTATGCCCTTAGATATCACAGTGAGAAGCTTGCACTAGCATTTGGTTTACTTAAAACCAGTCAAGGTGAGACTATTAGGATTGTAAAGAACCTTCGGATATGTGAGGATTGTCATTCAGCTATTAAACACATCTCTATTATTGCGGATAGAGAAATAATTGTTAGGGATAAATTTCGTTTTCACCACTTCAAAGGTGGTGCATGTTCTTGTCTTGATTATTGGTGA

Protein sequence

MNKTKSLITVEAEQLAFQHPLTHIFDSPSHSPVHAALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKLLSLVCAAGSIAYARRLFPTVPNPDLFLFDSLLKTTSKFGFSVDAVLFYRHMLYSGVRQSNYTFTSVIKACADLSALRLGRGIHSHVMVCGYGSDMYVQAALIALYAKAGDMKVAKKVFDAMPQRTIIAWNSLISGYEQNGLPTEAMGLFHLMLESGFQPDPATIVSLLSSCSQLGALDFGCWLHDYANSNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGEQAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIGDGRRAFASMKDVYGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLPEEPGPAVWTSMLGACRMHKNFDLGVKVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMGRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTSQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKGGACSCLDYW
Homology
BLAST of Lcy04g021350 vs. ExPASy Swiss-Prot
Match: P93011 (Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H6 PE=3 SV=1)

HSP 1 Score: 762.7 bits (1968), Expect = 3.2e-219
Identity = 356/578 (61.59%), Postives = 459/578 (79.41%), Query Frame = 0

Query: 29  SHSPVHAALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKLLSLVCAAGSIAYARRLFPT 88
           ++S  + A+++AGPR++ LQQVHAH+IV+G+ RSRSLLTKL++L C+A +IAY   LF +
Sbjct: 7   ANSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLS 66

Query: 89  VPNPDLFLFDSLLKTTSKFGFSVDAVLFYRHMLYSGVRQSNYTFTSVIKACADLSALRLG 148
           VP PD FLF+S++K+TSK    +  V +YR ML S V  SNYTFTSVIK+CADLSALR+G
Sbjct: 67  VPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIG 126

Query: 149 RGIHSHVMVCGYGSDMYVQAALIALYAKAGDMKVAKKVFDAMPQRTIIAWNSLISGYEQN 208
           +G+H H +V G+G D YVQAAL+  Y+K GDM+ A++VFD MP+++I+AWNSL+SG+EQN
Sbjct: 127 KGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQN 186

Query: 209 GLPTEAMGLFHLMLESGFQPDPATIVSLLSSCSQLGALDFGCWLHDYANSNGFDLNVVLG 268
           GL  EA+ +F+ M ESGF+PD AT VSLLS+C+Q GA+  G W+H Y  S G DLNV LG
Sbjct: 187 GLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLG 246

Query: 269 TSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGEQAMKLFGEMR-AYGP 328
           T+LIN+Y+RCG+V KAREVFD MKE NV  WTAMIS YG HGYG+QA++LF +M    GP
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGP 306

Query: 329 RPNNITFVAVLSACAHSGLIGDGRRAFASMKDVYGLVPGVEHHVCMVDMFGRAGLLNDAY 388
            PNN+TFVAVLSACAH+GL+ +GR  +  M   Y L+PGVEHHVCMVDM GRAG L++AY
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAY 366

Query: 389 QFIKNF--LPEEPGPAVWTSMLGACRMHKNFDLGVKVAEHVLAVEPENPGHYVMLSNIYA 448
           +FI       +   PA+WT+MLGAC+MH+N+DLGV++A+ ++A+EP+NPGH+VMLSNIYA
Sbjct: 367 KFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYA 426

Query: 449 LAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMG 508
           L+G+ D V  +R+ M+R  L+KQVGYS IE+  KTY+FSMGD+SH +T  IYRYL+ L+ 
Sbjct: 427 LSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLIS 486

Query: 509 RCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTSQGETIRIVKNLRICED 568
           RC E GY P  E +MH +EEEE+++ALRYHSEKLA+AFGLLKT     I IVKNLRICED
Sbjct: 487 RCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICED 546

Query: 569 CHSAIKHISIIADREIIVRDKFRFHHFKGGACSCLDYW 604
           CHSA K+ISI+++R+I VRDK RFHHF+ G+CSCLDYW
Sbjct: 547 CHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583

BLAST of Lcy04g021350 vs. ExPASy Swiss-Prot
Match: Q9ZVF4 (Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H37 PE=3 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 2.4e-134
Identity = 237/591 (40.10%), Postives = 369/591 (62.44%), Query Frame = 0

Query: 15  LAFQHPLTHIFDSPSHSPVHAALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKLLSLVC 74
           LA Q PLT          +   L  +  + + L+++HA ++ +GF    SLLT+LL  + 
Sbjct: 2   LAKQTPLT-------KQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLV 61

Query: 75  AAGSIAYARRLFPTVPNPDLFLFDSLLKTTSKFGFSVDAVLFYRHMLYSGVRQSNYTFTS 134
             G + YAR++F  +  P +FL+++L K   +     +++L Y+ M   GVR   +T+  
Sbjct: 62  VIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPF 121

Query: 135 VIKACADLSALRLGRGIHSHVMVCGYGSDMYVQAALIALYAKAGDMKVAKKVFDAMPQRT 194
           V+KA + L     G  +H+HV+  G+G    V   L+ +Y K G++  A+ +F++M  + 
Sbjct: 122 VVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKD 181

Query: 195 IIAWNSLISGYEQNGLPTEAMGLFHLMLESGFQPDPATIVSLLSSCSQLGALDFGCWLHD 254
           ++AWN+ ++   Q G    A+  F+ M     Q D  T+VS+LS+C QLG+L+ G  ++D
Sbjct: 182 LVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYD 241

Query: 255 YANSNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGEQ 314
            A     D N+++  + ++M+ +CGN   AR +F+ MK+RNVV+W+ MI GY M+G   +
Sbjct: 242 RARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSRE 301

Query: 315 AMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIGDGRRAFASM--KDVYGLVPGVEHHVC 374
           A+ LF  M+  G RPN +TF+ VLSAC+H+GL+ +G+R F+ M   +   L P  EH+ C
Sbjct: 302 ALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYAC 361

Query: 375 MVDMFGRAGLLNDAYQFIKNFLPEEPGPAVWTSMLGACRMHKNFDLGVKVAEHVLAVEPE 434
           MVD+ GR+GLL +AY+FIK  +P EP   +W ++LGAC +H++  LG KVA+ ++   P+
Sbjct: 362 MVDLLGRSGLLEEAYEFIKK-MPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPD 421

Query: 435 NPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQ 494
              ++V+LSNIYA AG+ D V+ VR+ M +   KK   YS++E   K + F+ GDKSHPQ
Sbjct: 422 IGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQ 481

Query: 495 TNTIYRYLDELMGRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTSQGE 554
           +  IY  LDE++ +  + GYVP   S+ HD+E EE++ +L +HSEKLA+AFGL+K   G 
Sbjct: 482 SKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGH 541

Query: 555 TIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKGGACSCLDYW 604
            IR++KNLR C+DCH+  K +S +   EII+RDK RFHHF+ G CSC ++W
Sbjct: 542 PIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584

BLAST of Lcy04g021350 vs. ExPASy Swiss-Prot
Match: Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 7.0e-134
Identity = 232/560 (41.43%), Postives = 351/560 (62.68%), Query Frame = 0

Query: 44  LRNLQQVHAHIIVSGFHRSRSLLTKLLSLVCAAGSIAYARRLFPTVPNPDLFLFDSLLKT 103
           LR   Q+H+    +G +    +LT  +SL    G I     LF     PD+  +++++  
Sbjct: 237 LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHG 296

Query: 104 TSKFGFSVDAVLFYRHMLYSGVRQSNYTFTSVIKACADLSALRLGRGIHSHVMVCGYGSD 163
            +  G +  ++  ++ ++ SG R  + T  S++     L  +     IH + +   + S 
Sbjct: 297 YTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSH 356

Query: 164 MYVQAALIALYAKAGDMKVAKKVFDAMPQRTIIAWNSLISGYEQNGLPTEAMGLFHLMLE 223
             V  AL  +Y+K  +++ A+K+FD  P++++ +WN++ISGY QNGL  +A+ LF  M +
Sbjct: 357 ASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK 416

Query: 224 SGFQPDPATIVSLLSSCSQLGALDFGCWLHDYANSNGFDLNVVLGTSLINMYTRCGNVSK 283
           S F P+P TI  +LS+C+QLGAL  G W+HD   S  F+ ++ + T+LI MY +CG++++
Sbjct: 417 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 476

Query: 284 AREVFDSMKERNVVTWTAMISGYGMHGYGEQAMKLFGEMRAYGPRPNNITFVAVLSACAH 343
           AR +FD M ++N VTW  MISGYG+HG G++A+ +F EM   G  P  +TF+ VL AC+H
Sbjct: 477 ARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSH 536

Query: 344 SGLIGDGRRAFASMKDVYGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLPEEPGPAVW 403
           +GL+ +G   F SM   YG  P V+H+ CMVD+ GRAG L  A QFI+  +  EPG +VW
Sbjct: 537 AGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIE-AMSIEPGSSVW 596

Query: 404 TSMLGACRMHKNFDLGVKVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRR 463
            ++LGACR+HK+ +L   V+E +  ++P+N G++V+LSNI++      +   VR    +R
Sbjct: 597 ETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKR 656

Query: 464 RLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMGRCSESGYVPAPESLMHDL 523
           +L K  GY+ IEI    ++F+ GD+SHPQ   IY  L++L G+  E+GY P  E  +HD+
Sbjct: 657 KLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDV 716

Query: 524 EEEERDYALRYHSEKLALAFGLLKTSQGETIRIVKNLRICEDCHSAIKHISIIADREIIV 583
           EEEER+  ++ HSE+LA+AFGL+ T  G  IRI+KNLR+C DCH+  K IS I +R I+V
Sbjct: 717 EEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVV 776

Query: 584 RDKFRFHHFKGGACSCLDYW 604
           RD  RFHHFK G CSC DYW
Sbjct: 777 RDANRFHHFKDGVCSCGDYW 792

BLAST of Lcy04g021350 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 474.2 bits (1219), Expect = 2.2e-132
Identity = 237/568 (41.73%), Postives = 365/568 (64.26%), Query Frame = 0

Query: 44  LRNLQQVHAHII-----VSGFHRSRSLLTKLLSLVCAAGSIAYARRLFPTVPNP-DLFLF 103
           +  L+Q+HA  I     +S     + L+  L+SL  +   ++YA ++F  +  P ++F++
Sbjct: 30  ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLP-SPPPMSYAHKVFSKIEKPINVFIW 89

Query: 104 DSLLKTTSKFGFSVDAVLFYRHMLYSG-VRQSNYTFTSVIKACADLSALRLGRGIHSHVM 163
           ++L++  ++ G S+ A   YR M  SG V    +T+  +IKA   ++ +RLG  IHS V+
Sbjct: 90  NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 149

Query: 164 VCGYGSDMYVQAALIALYAKAGDMKVAKKVFDAMPQRTIIAWNSLISGYEQNGLPTEAMG 223
             G+GS +YVQ +L+ LYA  GD+  A KVFD MP++ ++AWNS+I+G+ +NG P EA+ 
Sbjct: 150 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 209

Query: 224 LFHLMLESGFQPDPATIVSLLSSCSQLGALDFGCWLHDYANSNGFDLNVVLGTSLINMYT 283
           L+  M   G +PD  TIVSLLS+C+++GAL  G  +H Y    G   N+     L+++Y 
Sbjct: 210 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 269

Query: 284 RCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGEQAMKLFGEMRA-YGPRPNNITFV 343
           RCG V +A+ +FD M ++N V+WT++I G  ++G+G++A++LF  M +  G  P  ITFV
Sbjct: 270 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 329

Query: 344 AVLSACAHSGLIGDGRRAFASMKDVYGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLP 403
            +L AC+H G++ +G   F  M++ Y + P +EH  CMVD+  RAG +  AY++IK+ +P
Sbjct: 330 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS-MP 389

Query: 404 EEPGPAVWTSMLGACRMHKNFDLGVKVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEM 463
            +P   +W ++LGAC +H + DL       +L +EP + G YV+LSN+YA   R   V+ 
Sbjct: 390 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 449

Query: 464 VRNMMIRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMGRCSESGYVPA 523
           +R  M+R  +KK  G+S +E+  + + F MGDKSHPQ++ IY  L E+ GR    GYVP 
Sbjct: 450 IRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQ 509

Query: 524 PESLMHDLEEEERDYALRYHSEKLALAFGLLKTSQGETIRIVKNLRICEDCHSAIKHISI 583
             ++  D+EEEE++ A+ YHSEK+A+AF L+ T +   I +VKNLR+C DCH AIK +S 
Sbjct: 510 ISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSK 569

Query: 584 IADREIIVRDKFRFHHFKGGACSCLDYW 604
           + +REI+VRD+ RFHHFK G+CSC DYW
Sbjct: 570 VYNREIVVRDRSRFHHFKNGSCSCQDYW 595

BLAST of Lcy04g021350 vs. ExPASy Swiss-Prot
Match: Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 6.5e-132
Identity = 242/605 (40.00%), Postives = 364/605 (60.17%), Query Frame = 0

Query: 35  AALLQAGPRLRNLQQVHAHIIVSGF---HRSRSLLTKLLSLVCAAGSIAYARRLFPTVPN 94
           A L+     +  + Q+HA I+        R   L  KL     + G I ++  LF    +
Sbjct: 33  AVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTID 92

Query: 95  PDLFLFDSLLKTTSKFGFSVDAVLFYRHMLYSGVRQSNYTFTSVIKACADLSALRLGRGI 154
           PDLFLF + + T S  G    A L Y  +L S +  + +TF+S++K+C+  S    G+ I
Sbjct: 93  PDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLI 152

Query: 155 HSHVMVCGYGSDMYVQAALIALYAKAGDMKVAKKVFDAMPQRT----------------- 214
           H+HV+  G G D YV   L+ +YAK GD+  A+KVFD MP+R+                 
Sbjct: 153 HTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNV 212

Query: 215 --------------IIAWNSLISGYEQNGLPTEAMGLFHLMLESGF-QPDPATIVSLLSS 274
                         I++WN +I GY Q+G P +A+ LF  +L  G  +PD  T+V+ LS+
Sbjct: 213 EAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSA 272

Query: 275 CSQLGALDFGCWLHDYANSNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTW 334
           CSQ+GAL+ G W+H +  S+   LNV + T LI+MY++CG++ +A  VF+    +++V W
Sbjct: 273 CSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAW 332

Query: 335 TAMISGYGMHGYGEQAMKLFGEMRAY-GPRPNNITFVAVLSACAHSGLIGDGRRAFASMK 394
            AMI+GY MHGY + A++LF EM+   G +P +ITF+  L ACAH+GL+ +G R F SM 
Sbjct: 333 NAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMG 392

Query: 395 DVYGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLPEEPGPAVWTSMLGACRMHKNFDL 454
             YG+ P +EH+ C+V + GRAG L  AY+ IKN +  +    +W+S+LG+C++H +F L
Sbjct: 393 QEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKN-MNMDADSVLWSSVLGSCKLHGDFVL 452

Query: 455 GVKVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINR 514
           G ++AE+++ +  +N G YV+LSNIYA  G  + V  VRN+M  + + K+ G STIEI  
Sbjct: 453 GKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIEN 512

Query: 515 KTYLFSMGDKSHPQTNTIYRYLDELMGRCSESGYVPAPESLMHDLEEEERDYALRYHSEK 574
           K + F  GD+ H ++  IY  L ++  R    GYVP   +++ DLEE E++ +L+ HSE+
Sbjct: 513 KVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSER 572

Query: 575 LALAFGLLKTSQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKGGACS 604
           LA+A+GL+ T  G  ++I KNLR+C DCH+  K IS I  R+I++RD+ RFHHF  G+CS
Sbjct: 573 LAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCS 632

BLAST of Lcy04g021350 vs. ExPASy TrEMBL
Match: A0A6J1EL35 (pentatricopeptide repeat-containing protein At2g33760 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433589 PE=3 SV=1)

HSP 1 Score: 1132.9 bits (2929), Expect = 0.0e+00
Identity = 549/603 (91.04%), Postives = 577/603 (95.69%), Query Frame = 0

Query: 1   MNKTKSLITVEAEQLAFQHPLTHIFDSPSHSPVHAALLQAGPRLRNLQQVHAHIIVSGFH 60
           MNKTKSLITVE++QLA QHP+THIFDS  HSP++AALLQAGPRLRNLQQVHAHIIVSGFH
Sbjct: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60

Query: 61  RSRSLLTKLLSLVCAAGSIAYARRLFPTVPNPDLFLFDSLLKTTSKFGFSVDAVLFYRHM 120
           RSRSLLTKLLSL+CAAGSI YAR+L PTVPNPD FLF+SLLK TSK+GFSVDAVLFYRHM
Sbjct: 61  RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120

Query: 121 LYSGVRQSNYTFTSVIKACADLSALRLGRGIHSHVMVCGYGSDMYVQAALIALYAKAGDM 180
           L+ GV QSNYTFTSVIKACADLSALRLGR IHSHV+V GYGSDMYVQAALIALYAKAGDM
Sbjct: 121 LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM 180

Query: 181 KVAKKVFDAMPQRTIIAWNSLISGYEQNGLPTEAMGLFHLMLESGFQPDPATIVSLLSSC 240
           KVA+KVFD MPQRT IAWNSLISGYEQNGLP +++ LF+LM+ SGFQPD AT+VSLLSSC
Sbjct: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC 240

Query: 241 SQLGALDFGCWLHDYANSNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWT 300
           SQLGALDFGCWLHDYANSN FDLNVVLGTSLINMYTRCGNVSKAREVFDSMK RNVVTWT
Sbjct: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT 300

Query: 301 AMISGYGMHGYGEQAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIGDGRRAFASMKDV 360
           AMISGYGMHGYGEQAMKLF EMRAYGPRPNNITFVAVLSACAHSGLI DGRRAF+SMK+V
Sbjct: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV 360

Query: 361 YGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLPEEPGPAVWTSMLGACRMHKNFDLGV 420
           YGLVPGVEHHVCMVDMFGRAGLL DAYQFI+ FLPEEPGPAVWTSMLGACRMHKNFDLGV
Sbjct: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKNFDLGV 420

Query: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINRKT 480
           KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMM+RRRLKKQVGYSTIEIN+KT
Sbjct: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480

Query: 481 YLFSMGDKSHPQTNTIYRYLDELMGRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLA 540
           Y+FSMGDKSHP+TN IYRYLDELMGRCSESGY+PA ESLMHDLEEEERDYALRYHSEKLA
Sbjct: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540

Query: 541 LAFGLLKTSQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKGGACSCL 600
           LAFGLLKT+QGETIRIVKNLRICEDCHSAIKHIS+IADREIIVRDKFRFHHFK GACSCL
Sbjct: 541 LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGACSCL 600

Query: 601 DYW 604
           DYW
Sbjct: 601 DYW 603

BLAST of Lcy04g021350 vs. ExPASy TrEMBL
Match: A0A5D3CPN1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007480 PE=3 SV=1)

HSP 1 Score: 1112.8 bits (2877), Expect = 0.0e+00
Identity = 541/603 (89.72%), Postives = 570/603 (94.53%), Query Frame = 0

Query: 1   MNKTKSLITVEAEQLAFQHPLTHIFDSPSHSPVHAALLQAGPRLRNLQQVHAHIIVSGFH 60
           MNK K    ++ +QLAFQHP+T  FD+ S SPV+ ALL++GPRLRNLQQVHAHIIVSG H
Sbjct: 1   MNKIK----LQTQQLAFQHPVTRNFDTQSRSPVYEALLRSGPRLRNLQQVHAHIIVSGLH 60

Query: 61  RSRSLLTKLLSLVCAAGSIAYARRLFPTVPNPDLFLFDSLLKTTSKFGFSVDAVLFYRHM 120
           RSRSLLTKL+SLVC AGSI YARRLFPTVPNPD FLFDSLLK TSKFGFS+DAVLFYRHM
Sbjct: 61  RSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDAVLFYRHM 120

Query: 121 LYSGVRQSNYTFTSVIKACADLSALRLGRGIHSHVMVCGYGSDMYVQAALIALYAKAGDM 180
           L+SG   SNYTFTSVIKACADLSALRLG+ IHSHVMVCGYGSDMYVQAALIALYAKA DM
Sbjct: 121 LFSGAPPSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDM 180

Query: 181 KVAKKVFDAMPQRTIIAWNSLISGYEQNGLPTEAMGLFHLMLESGFQPDPATIVSLLSSC 240
           KVAKKVFDAMPQRTIIAWNSLISG+EQNGLP E++ LFHLM++SG QPDPATIVSLLSSC
Sbjct: 181 KVAKKVFDAMPQRTIIAWNSLISGFEQNGLPQESIDLFHLMMKSGLQPDPATIVSLLSSC 240

Query: 241 SQLGALDFGCWLHDYANSNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWT 300
           SQLGALDFGCWLHDY+N NGFDLNVVLGTSLINMYTRCGNVSKA+EVFDSMKERNVVTWT
Sbjct: 241 SQLGALDFGCWLHDYSNVNGFDLNVVLGTSLINMYTRCGNVSKAQEVFDSMKERNVVTWT 300

Query: 301 AMISGYGMHGYGEQAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIGDGRRAFASMKDV 360
           AMISGYGMHG+G+QAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLI DGRR F+SMK+V
Sbjct: 301 AMISGYGMHGHGKQAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEV 360

Query: 361 YGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLPEEPGPAVWTSMLGACRMHKNFDLGV 420
           YGLVPGVEH+VCMVDMFGRAGLLNDAYQFIK  LP+EPGPAVWTSMLGACRMH+NFDLGV
Sbjct: 361 YGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKILPKEPGPAVWTSMLGACRMHRNFDLGV 420

Query: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINRKT 480
           KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMM RRRLKKQVGYSTIEINRKT
Sbjct: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKT 480

Query: 481 YLFSMGDKSHPQTNTIYRYLDELMGRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLA 540
           YLFSMGDKSHPQTNTIYRYLDELM RCSESGYVPAPESLMHDLEEEERDYALRYHSEKLA
Sbjct: 481 YLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLA 540

Query: 541 LAFGLLKTSQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKGGACSCL 600
           LAFGLL T+QGETIRIVKNLR+CEDCHSAIKHISIIADREIIVRDKFRFHHFK G+CSCL
Sbjct: 541 LAFGLLNTNQGETIRIVKNLRMCEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCL 599

Query: 601 DYW 604
           DYW
Sbjct: 601 DYW 599

BLAST of Lcy04g021350 vs. ExPASy TrEMBL
Match: A0A1S4DTH4 (pentatricopeptide repeat-containing protein At2g33760 OS=Cucumis melo OX=3656 GN=LOC103484519 PE=3 SV=1)

HSP 1 Score: 1112.8 bits (2877), Expect = 0.0e+00
Identity = 541/603 (89.72%), Postives = 570/603 (94.53%), Query Frame = 0

Query: 1   MNKTKSLITVEAEQLAFQHPLTHIFDSPSHSPVHAALLQAGPRLRNLQQVHAHIIVSGFH 60
           MNK K    ++ +QLAFQHP+T  FD+ S SPV+ ALL++GPRLRNLQQVHAHIIVSG H
Sbjct: 1   MNKIK----LQTQQLAFQHPVTRNFDTQSRSPVYEALLRSGPRLRNLQQVHAHIIVSGLH 60

Query: 61  RSRSLLTKLLSLVCAAGSIAYARRLFPTVPNPDLFLFDSLLKTTSKFGFSVDAVLFYRHM 120
           RSRSLLTKL+SLVC AGSI YARRLFPTVPNPD FLFDSLLK TSKFGFS+DAVLFYRHM
Sbjct: 61  RSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKFGFSIDAVLFYRHM 120

Query: 121 LYSGVRQSNYTFTSVIKACADLSALRLGRGIHSHVMVCGYGSDMYVQAALIALYAKAGDM 180
           L+SG   SNYTFTSVIKACADLSALRLG+ IHSHVMVCGYGSDMYVQAALIALYAKA DM
Sbjct: 121 LFSGAPPSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDM 180

Query: 181 KVAKKVFDAMPQRTIIAWNSLISGYEQNGLPTEAMGLFHLMLESGFQPDPATIVSLLSSC 240
           KVAKKVFDAMPQRTIIAWNSLISG+EQNGLP E++ LFHLM++SG QPDPATIVSLLSSC
Sbjct: 181 KVAKKVFDAMPQRTIIAWNSLISGFEQNGLPQESIDLFHLMMKSGLQPDPATIVSLLSSC 240

Query: 241 SQLGALDFGCWLHDYANSNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWT 300
           SQLGALDFGCWLHDY+N NGFDLNVVLGTSLINMYTRCGNVSKA+EVFDSMKERNVVTWT
Sbjct: 241 SQLGALDFGCWLHDYSNVNGFDLNVVLGTSLINMYTRCGNVSKAQEVFDSMKERNVVTWT 300

Query: 301 AMISGYGMHGYGEQAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIGDGRRAFASMKDV 360
           AMISGYGMHG+G+QAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLI DGRR F+SMK+V
Sbjct: 301 AMISGYGMHGHGKQAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEV 360

Query: 361 YGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLPEEPGPAVWTSMLGACRMHKNFDLGV 420
           YGLVPGVEH+VCMVDMFGRAGLLNDAYQFIK  LP+EPGPAVWTSMLGACRMH+NFDLGV
Sbjct: 361 YGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKILPKEPGPAVWTSMLGACRMHRNFDLGV 420

Query: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINRKT 480
           KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMM RRRLKKQVGYSTIEINRKT
Sbjct: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKT 480

Query: 481 YLFSMGDKSHPQTNTIYRYLDELMGRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLA 540
           YLFSMGDKSHPQTNTIYRYLDELM RCSESGYVPAPESLMHDLEEEERDYALRYHSEKLA
Sbjct: 481 YLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLA 540

Query: 541 LAFGLLKTSQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKGGACSCL 600
           LAFGLL T+QGETIRIVKNLR+CEDCHSAIKHISIIADREIIVRDKFRFHHFK G+CSCL
Sbjct: 541 LAFGLLNTNQGETIRIVKNLRMCEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCL 599

Query: 601 DYW 604
           DYW
Sbjct: 601 DYW 599

BLAST of Lcy04g021350 vs. ExPASy TrEMBL
Match: A0A6J1KND5 (pentatricopeptide repeat-containing protein At2g33760 OS=Cucurbita maxima OX=3661 GN=LOC111496866 PE=3 SV=1)

HSP 1 Score: 1109.0 bits (2867), Expect = 0.0e+00
Identity = 536/594 (90.24%), Postives = 567/594 (95.45%), Query Frame = 0

Query: 10  VEAEQLAFQHPLTHIFDSPSHSPVHAALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKL 69
           +E++QLA QHP+THIFDS  HSP++AALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKL
Sbjct: 32  LESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKL 91

Query: 70  LSLVCAAGSIAYARRLFPTVPNPDLFLFDSLLKTTSKFGFSVDAVLFYRHMLYSGVRQSN 129
           LSLVCAAGSI YARRL PTVPNPD FLF+SLLK TSK+GFSVDAVLFYRHML+ GV QSN
Sbjct: 92  LSLVCAAGSITYARRLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHMLFLGVSQSN 151

Query: 130 YTFTSVIKACADLSALRLGRGIHSHVMVCGYGSDMYVQAALIALYAKAGDMKVAKKVFDA 189
           YTFTSVIKACADLSALRLGR IHSHV+V GYGSDMYVQAALIALYAKAGDMKVA+KVFD 
Sbjct: 152 YTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDMKVAQKVFDE 211

Query: 190 MPQRTIIAWNSLISGYEQNGLPTEAMGLFHLMLESGFQPDPATIVSLLSSCSQLGALDFG 249
           MPQRT IAWNSLISGYEQNGLP +++ LF+ M+ SGFQPD AT+VSLLSSCSQLGALDFG
Sbjct: 212 MPQRTTIAWNSLISGYEQNGLPAKSIDLFNPMIGSGFQPDSATVVSLLSSCSQLGALDFG 271

Query: 250 CWLHDYANSNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMH 309
           CWLHDYANSN F+LNVVLGTSLINMYTRCGNVSKAREVFDSMK RNVVTWTAMISGYGMH
Sbjct: 272 CWLHDYANSNSFNLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWTAMISGYGMH 331

Query: 310 GYGEQAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIGDGRRAFASMKDVYGLVPGVEH 369
           GYGEQAMKLF EMRAYGPRPNNITFVAVLSACAHSGLI DGR+AF+SMK+VYGLVPGVEH
Sbjct: 332 GYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRQAFSSMKEVYGLVPGVEH 391

Query: 370 HVCMVDMFGRAGLLNDAYQFIKNFLPEEPGPAVWTSMLGACRMHKNFDLGVKVAEHVLAV 429
           HVCMVDMFGRAGLL DAYQFI+ FLPEEPGPAVWTSMLGACRMHKNFDLGVKVAEHVLAV
Sbjct: 392 HVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKNFDLGVKVAEHVLAV 451

Query: 430 EPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINRKTYLFSMGDKS 489
           EPENPGHYVMLSNIYALAGRMD+VEMVRNMM+RRRLKKQVGYSTIEIN+KTY+FSMGDKS
Sbjct: 452 EPENPGHYVMLSNIYALAGRMDQVEMVRNMMVRRRLKKQVGYSTIEINQKTYMFSMGDKS 511

Query: 490 HPQTNTIYRYLDELMGRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTS 549
           HP+TN IYRYLDELMGRCSESGY+PA ESLMHDLEEEERDYALRYHSE+LALAFGLLKT+
Sbjct: 512 HPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSERLALAFGLLKTN 571

Query: 550 QGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKGGACSCLDYW 604
           QGETIRIVKNLRICEDCHSAIKHIS+IADREIIVRDKFRFHHFK GACSCLDYW
Sbjct: 572 QGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGACSCLDYW 625

BLAST of Lcy04g021350 vs. ExPASy TrEMBL
Match: A0A6J1CMK4 (pentatricopeptide repeat-containing protein At2g33760 OS=Momordica charantia OX=3673 GN=LOC111012351 PE=3 SV=1)

HSP 1 Score: 1083.9 bits (2802), Expect = 0.0e+00
Identity = 532/604 (88.08%), Postives = 560/604 (92.72%), Query Frame = 0

Query: 1   MNKTKSLITVEAEQLAF-QHPLTHIFDSPSHSPVHAALLQAGPRLRNLQQVHAHIIVSGF 60
           MN+ KS ITVE E LA+  H LT I DS  HSPV+ +LLQAGPRLR+LQQVHA IIVSG 
Sbjct: 1   MNEIKSPITVEVETLAYHHHHLTSIPDSRPHSPVYESLLQAGPRLRHLQQVHARIIVSGS 60

Query: 61  HRSRSLLTKLLSLVCAAGSIAYARRLFPTVPNPDLFLFDSLLKTTSKFGFSVDAVLFYRH 120
           HRSRSLLTKL+SLVC+AGSIAYARRLF TVPNPD FLF+SLLK TSKFG+SVD VL YRH
Sbjct: 61  HRSRSLLTKLISLVCSAGSIAYARRLFLTVPNPDSFLFNSLLKATSKFGYSVDTVLLYRH 120

Query: 121 MLYSGVRQSNYTFTSVIKACADLSALRLGRGIHSHVMVCGYGSDMYVQAALIALYAKAGD 180
           ML S    SNYTFTSVIKACADLSALRLGRGIHSHVMVCGYGSDMYVQAALIALYAKAGD
Sbjct: 121 MLISDAPHSNYTFTSVIKACADLSALRLGRGIHSHVMVCGYGSDMYVQAALIALYAKAGD 180

Query: 181 MKVAKKVFDAMPQRTIIAWNSLISGYEQNGLPTEAMGLFHLMLESGFQPDPATIVSLLSS 240
           MKVAKKVFD MPQRTI+AWNSLISGYEQNG P E++GLFH MLESGFQPD AT VSLLSS
Sbjct: 181 MKVAKKVFDEMPQRTIVAWNSLISGYEQNGFPAESIGLFHQMLESGFQPDSATTVSLLSS 240

Query: 241 CSQLGALDFGCWLHDYANSNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTW 300
           CSQLGAL  GCWLHDYANSNGFDL+VVLGTSLINMYTRCGNVSKAREVFDSM +RNVV+W
Sbjct: 241 CSQLGALGLGCWLHDYANSNGFDLSVVLGTSLINMYTRCGNVSKAREVFDSMNKRNVVSW 300

Query: 301 TAMISGYGMHGYGEQAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIGDGRRAFASMKD 360
           TAMISGYGMHGYGEQAMKLFGEMRAYGP PNNITFVA+LSACAHSGLI DGR AFASMK+
Sbjct: 301 TAMISGYGMHGYGEQAMKLFGEMRAYGPPPNNITFVAILSACAHSGLIDDGRLAFASMKE 360

Query: 361 VYGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLPEEPGPAVWTSMLGACRMHKNFDLG 420
           VYGLVPGVEHHVCMVDMFGRAGLLN+AYQFIK  LPEEPGPAVWTSMLGACRM+KNFDLG
Sbjct: 361 VYGLVPGVEHHVCMVDMFGRAGLLNEAYQFIKKCLPEEPGPAVWTSMLGACRMYKNFDLG 420

Query: 421 VKVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINRK 480
           V+VAEH+LAV+PENPGHYVMLSNIYALAGRMDRVEMVRNMMIR+RLKKQVGYSTIEINR+
Sbjct: 421 VEVAEHLLAVDPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRQRLKKQVGYSTIEINRR 480

Query: 481 TYLFSMGDKSHPQTNTIYRYLDELMGRCSESGYVPAPESLMHDLEEEERDYALRYHSEKL 540
           TYLFSMGDKSHP+TN IYRYLDEL+ RCSE GYVPAPESLMHDLEEEERD+ALRYHSEKL
Sbjct: 481 TYLFSMGDKSHPETNAIYRYLDELLSRCSELGYVPAPESLMHDLEEEERDHALRYHSEKL 540

Query: 541 ALAFGLLKTSQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKGGACSC 600
           ALAFGLLKT+QGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFK G CSC
Sbjct: 541 ALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGTCSC 600

Query: 601 LDYW 604
            DYW
Sbjct: 601 FDYW 604

BLAST of Lcy04g021350 vs. NCBI nr
Match: XP_023517887.1 (pentatricopeptide repeat-containing protein At2g33760 [Cucurbita pepo subsp. pepo] >XP_023517888.1 pentatricopeptide repeat-containing protein At2g33760 [Cucurbita pepo subsp. pepo] >XP_023517889.1 pentatricopeptide repeat-containing protein At2g33760 [Cucurbita pepo subsp. pepo] >XP_023517890.1 pentatricopeptide repeat-containing protein At2g33760 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1133.2 bits (2930), Expect = 0.0e+00
Identity = 549/603 (91.04%), Postives = 577/603 (95.69%), Query Frame = 0

Query: 1   MNKTKSLITVEAEQLAFQHPLTHIFDSPSHSPVHAALLQAGPRLRNLQQVHAHIIVSGFH 60
           MNKTKSLITVE++QLA QHP+THIFDS  HSP++AALLQAGPRLRNLQQVHAHIIVSGFH
Sbjct: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60

Query: 61  RSRSLLTKLLSLVCAAGSIAYARRLFPTVPNPDLFLFDSLLKTTSKFGFSVDAVLFYRHM 120
           RSRSLLTKLLSLVCAAGSI YARRL PTVPNPD FLF+SLLK TSK+GFSVDAVLFYRHM
Sbjct: 61  RSRSLLTKLLSLVCAAGSITYARRLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120

Query: 121 LYSGVRQSNYTFTSVIKACADLSALRLGRGIHSHVMVCGYGSDMYVQAALIALYAKAGDM 180
           L+ GV QSNYTFTSVIKACADLSALRLGR IHSHV+V GYGSDMYVQAALIALY+KAGDM
Sbjct: 121 LFLGVYQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYSKAGDM 180

Query: 181 KVAKKVFDAMPQRTIIAWNSLISGYEQNGLPTEAMGLFHLMLESGFQPDPATIVSLLSSC 240
           KVA+KVFD MPQRT IAWNSLISGYEQNGLP +++ LF+LM+ SGFQPD AT+VSLLSSC
Sbjct: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPAKSIDLFNLMIGSGFQPDSATVVSLLSSC 240

Query: 241 SQLGALDFGCWLHDYANSNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWT 300
           SQLGALDFGCWLHDYANSN FDLNVVLGTSLINMYTRCGNVSKAREVFDSMK RNVVTWT
Sbjct: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKLRNVVTWT 300

Query: 301 AMISGYGMHGYGEQAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIGDGRRAFASMKDV 360
           AMISGYGMHGYGEQAMKLF EMRAYGPRPNNITFVAVLSACAHSGLI DGRRAF+SMK++
Sbjct: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEI 360

Query: 361 YGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLPEEPGPAVWTSMLGACRMHKNFDLGV 420
           YGLVPGVEHHVCMVDMFGRAGLL DAYQFI+ FLPEEPGPAVWTSMLGACRMHKNFDLGV
Sbjct: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKNFDLGV 420

Query: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINRKT 480
           KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMM+RRRLKKQVGYSTIEIN+KT
Sbjct: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480

Query: 481 YLFSMGDKSHPQTNTIYRYLDELMGRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLA 540
           Y+FSMGDKSHP+TN IYRYLDELMGRCSESGY+PA ESLMHDLEEEERDYALRYHSEKLA
Sbjct: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540

Query: 541 LAFGLLKTSQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKGGACSCL 600
           LAFGLLKT+QGETIRIVKNLRICEDCHSAIKHIS+IADREIIVRDKFRFHHFK GACSCL
Sbjct: 541 LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGACSCL 600

Query: 601 DYW 604
           DYW
Sbjct: 601 DYW 603

BLAST of Lcy04g021350 vs. NCBI nr
Match: XP_022926430.1 (pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1132.9 bits (2929), Expect = 0.0e+00
Identity = 549/603 (91.04%), Postives = 577/603 (95.69%), Query Frame = 0

Query: 1   MNKTKSLITVEAEQLAFQHPLTHIFDSPSHSPVHAALLQAGPRLRNLQQVHAHIIVSGFH 60
           MNKTKSLITVE++QLA QHP+THIFDS  HSP++AALLQAGPRLRNLQQVHAHIIVSGFH
Sbjct: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60

Query: 61  RSRSLLTKLLSLVCAAGSIAYARRLFPTVPNPDLFLFDSLLKTTSKFGFSVDAVLFYRHM 120
           RSRSLLTKLLSL+CAAGSI YAR+L PTVPNPD FLF+SLLK TSK+GFSVDAVLFYRHM
Sbjct: 61  RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120

Query: 121 LYSGVRQSNYTFTSVIKACADLSALRLGRGIHSHVMVCGYGSDMYVQAALIALYAKAGDM 180
           L+ GV QSNYTFTSVIKACADLSALRLGR IHSHV+V GYGSDMYVQAALIALYAKAGDM
Sbjct: 121 LFLGVSQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM 180

Query: 181 KVAKKVFDAMPQRTIIAWNSLISGYEQNGLPTEAMGLFHLMLESGFQPDPATIVSLLSSC 240
           KVA+KVFD MPQRT IAWNSLISGYEQNGLP +++ LF+LM+ SGFQPD AT+VSLLSSC
Sbjct: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC 240

Query: 241 SQLGALDFGCWLHDYANSNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWT 300
           SQLGALDFGCWLHDYANSN FDLNVVLGTSLINMYTRCGNVSKAREVFDSMK RNVVTWT
Sbjct: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT 300

Query: 301 AMISGYGMHGYGEQAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIGDGRRAFASMKDV 360
           AMISGYGMHGYGEQAMKLF EMRAYGPRPNNITFVAVLSACAHSGLI DGRRAF+SMK+V
Sbjct: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV 360

Query: 361 YGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLPEEPGPAVWTSMLGACRMHKNFDLGV 420
           YGLVPGVEHHVCMVDMFGRAGLL DAYQFI+ FLPEEPGPAVWTSMLGACRMHKNFDLGV
Sbjct: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKNFDLGV 420

Query: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINRKT 480
           KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMM+RRRLKKQVGYSTIEIN+KT
Sbjct: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480

Query: 481 YLFSMGDKSHPQTNTIYRYLDELMGRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLA 540
           Y+FSMGDKSHP+TN IYRYLDELMGRCSESGY+PA ESLMHDLEEEERDYALRYHSEKLA
Sbjct: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540

Query: 541 LAFGLLKTSQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKGGACSCL 600
           LAFGLLKT+QGETIRIVKNLRICEDCHSAIKHIS+IADREIIVRDKFRFHHFK GACSCL
Sbjct: 541 LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGACSCL 600

Query: 601 DYW 604
           DYW
Sbjct: 601 DYW 603

BLAST of Lcy04g021350 vs. NCBI nr
Match: KAG6594603.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1132.1 bits (2927), Expect = 0.0e+00
Identity = 549/603 (91.04%), Postives = 577/603 (95.69%), Query Frame = 0

Query: 1   MNKTKSLITVEAEQLAFQHPLTHIFDSPSHSPVHAALLQAGPRLRNLQQVHAHIIVSGFH 60
           MNKTKSLITVE++QLA QHP+THIFDS  HSP++AALLQAGPRLRNLQQVHAHIIVSGFH
Sbjct: 1   MNKTKSLITVESQQLALQHPVTHIFDSRPHSPIYAALLQAGPRLRNLQQVHAHIIVSGFH 60

Query: 61  RSRSLLTKLLSLVCAAGSIAYARRLFPTVPNPDLFLFDSLLKTTSKFGFSVDAVLFYRHM 120
           RSRSLLTKLLSL+CAAGSI YAR+L PTVPNPD FLF+SLLK TSK+GFSVDAVLFYRHM
Sbjct: 61  RSRSLLTKLLSLICAAGSITYARQLLPTVPNPDSFLFNSLLKATSKYGFSVDAVLFYRHM 120

Query: 121 LYSGVRQSNYTFTSVIKACADLSALRLGRGIHSHVMVCGYGSDMYVQAALIALYAKAGDM 180
           L+ GV QSNYTFTSVIKACADLSALRLGR IHSHV+V GYGSDMYVQAALIALYAKAGDM
Sbjct: 121 LFLGVFQSNYTFTSVIKACADLSALRLGREIHSHVVVSGYGSDMYVQAALIALYAKAGDM 180

Query: 181 KVAKKVFDAMPQRTIIAWNSLISGYEQNGLPTEAMGLFHLMLESGFQPDPATIVSLLSSC 240
           KVA+KVFD MPQRT IAWNSLISGYEQNGLP +++ LF+LM+ SGFQPD AT+VSLLSSC
Sbjct: 181 KVAQKVFDEMPQRTTIAWNSLISGYEQNGLPGKSIDLFNLMIGSGFQPDSATVVSLLSSC 240

Query: 241 SQLGALDFGCWLHDYANSNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWT 300
           SQLGALDFGCWLHDYANSN FDLNVVLGTSLINMYTRCGNVSKAREVFDSMK RNVVTWT
Sbjct: 241 SQLGALDFGCWLHDYANSNSFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKVRNVVTWT 300

Query: 301 AMISGYGMHGYGEQAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIGDGRRAFASMKDV 360
           AMISGYGMHGYGEQAMKLF EMRAYGPRPNNITFVAVLSACAHSGLI DGRRAF+SMK+V
Sbjct: 301 AMISGYGMHGYGEQAMKLFNEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRAFSSMKEV 360

Query: 361 YGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLPEEPGPAVWTSMLGACRMHKNFDLGV 420
           YGLVPGVEHHVCMVDMFGRAGLL DAYQFI+ FLPEEPGPAVWTSMLGACRMHKNFDLGV
Sbjct: 361 YGLVPGVEHHVCMVDMFGRAGLLKDAYQFIRKFLPEEPGPAVWTSMLGACRMHKNFDLGV 420

Query: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINRKT 480
           KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMM+RRRLKKQVGYSTIEIN+KT
Sbjct: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMVRRRLKKQVGYSTIEINQKT 480

Query: 481 YLFSMGDKSHPQTNTIYRYLDELMGRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLA 540
           Y+FSMGDKSHP+TN IYRYLDELMGRCSESGY+PA ESLMHDLEEEERDYALRYHSEKLA
Sbjct: 481 YMFSMGDKSHPETNAIYRYLDELMGRCSESGYIPALESLMHDLEEEERDYALRYHSEKLA 540

Query: 541 LAFGLLKTSQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKGGACSCL 600
           LAFGLLKT+QGETIRIVKNLRICEDCHSAIKHIS+IADREIIVRDKFRFHHFK GACSCL
Sbjct: 541 LAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISVIADREIIVRDKFRFHHFKDGACSCL 600

Query: 601 DYW 604
           DYW
Sbjct: 601 DYW 603

BLAST of Lcy04g021350 vs. NCBI nr
Match: XP_038881818.1 (pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881819.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881820.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881821.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881822.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881823.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881824.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881825.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881826.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881827.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881828.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881829.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881830.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881831.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881832.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881833.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881834.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881835.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881836.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881837.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881838.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida] >XP_038881839.1 pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hispida])

HSP 1 Score: 1130.2 bits (2922), Expect = 0.0e+00
Identity = 550/603 (91.21%), Postives = 573/603 (95.02%), Query Frame = 0

Query: 1   MNKTKSLITVEAEQLAFQHPLTHIFDSPSHSPVHAALLQAGPRLRNLQQVHAHIIVSGFH 60
           +N T + I +E EQL FQHP+T IF S SHSPV+ ALLQAG RLR+LQQVHAHIIVSG H
Sbjct: 101 INPTMNKIKLETEQLPFQHPVTRIFYSRSHSPVYKALLQAGSRLRSLQQVHAHIIVSGLH 160

Query: 61  RSRSLLTKLLSLVCAAGSIAYARRLFPTVPNPDLFLFDSLLKTTSKFGFSVDAVLFYRHM 120
            SRSLLTKL+SLVCAAGSI YARRLFPTVPNPD FLFDSLLK TSKF FS+DAVLFYRHM
Sbjct: 161 TSRSLLTKLISLVCAAGSITYARRLFPTVPNPDSFLFDSLLKATSKFAFSIDAVLFYRHM 220

Query: 121 LYSGVRQSNYTFTSVIKACADLSALRLGRGIHSHVMVCGYGSDMYVQAALIALYAKAGDM 180
           L+SGV QSNYTFTSVIKACADLSALRLGR IHSHVMVCGYGSDMYVQAALIALYAKA DM
Sbjct: 221 LFSGVPQSNYTFTSVIKACADLSALRLGREIHSHVMVCGYGSDMYVQAALIALYAKASDM 280

Query: 181 KVAKKVFDAMPQRTIIAWNSLISGYEQNGLPTEAMGLFHLMLESGFQPDPATIVSLLSSC 240
           KVAKKVFDAMPQRTIIAWNSLISGYEQNG P E++G+FHLMLESGFQPDP TIVSLLSSC
Sbjct: 281 KVAKKVFDAMPQRTIIAWNSLISGYEQNGFPKESIGIFHLMLESGFQPDPTTIVSLLSSC 340

Query: 241 SQLGALDFGCWLHDYANSNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWT 300
           SQLGALDFGCWLHDYAN NGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWT
Sbjct: 341 SQLGALDFGCWLHDYANGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWT 400

Query: 301 AMISGYGMHGYGEQAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIGDGRRAFASMKDV 360
           AMISGYGMHG GEQAMKLFGEMRA+GPRPNNITFVAVLSACAHSGLI DGRR F+SMK+ 
Sbjct: 401 AMISGYGMHGNGEQAMKLFGEMRAHGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEA 460

Query: 361 YGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLPEEPGPAVWTSMLGACRMHKNFDLGV 420
           YGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLP+EPG AVWTSMLGACRMHKNFDLGV
Sbjct: 461 YGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLPKEPGAAVWTSMLGACRMHKNFDLGV 520

Query: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINRKT 480
           KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYS+IEINRKT
Sbjct: 521 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSSIEINRKT 580

Query: 481 YLFSMGDKSHPQTNTIYRYLDELMGRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLA 540
           YLFSMGDKSHPQT+TIYRYLDELMGRCSESGYVPAPESLMHDLE+EERDYALRYHSEK+A
Sbjct: 581 YLFSMGDKSHPQTSTIYRYLDELMGRCSESGYVPAPESLMHDLEDEERDYALRYHSEKVA 640

Query: 541 LAFGLLKTSQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKGGACSCL 600
           LAFGLL+T+QGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFK G+CSCL
Sbjct: 641 LAFGLLETNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCL 700

Query: 601 DYW 604
           DYW
Sbjct: 701 DYW 703

BLAST of Lcy04g021350 vs. NCBI nr
Match: XP_038881841.1 (pentatricopeptide repeat-containing protein At2g33760 isoform X3 [Benincasa hispida])

HSP 1 Score: 1127.5 bits (2915), Expect = 0.0e+00
Identity = 551/603 (91.38%), Postives = 572/603 (94.86%), Query Frame = 0

Query: 1   MNKTKSLITVEAEQLAFQHPLTHIFDSPSHSPVHAALLQAGPRLRNLQQVHAHIIVSGFH 60
           MNK K    +E EQL FQHP+T IF S SHSPV+ ALLQAG RLR+LQQVHAHIIVSG H
Sbjct: 1   MNKIK----LETEQLPFQHPVTRIFYSRSHSPVYKALLQAGSRLRSLQQVHAHIIVSGLH 60

Query: 61  RSRSLLTKLLSLVCAAGSIAYARRLFPTVPNPDLFLFDSLLKTTSKFGFSVDAVLFYRHM 120
            SRSLLTKL+SLVCAAGSI YARRLFPTVPNPD FLFDSLLK TSKF FS+DAVLFYRHM
Sbjct: 61  TSRSLLTKLISLVCAAGSITYARRLFPTVPNPDSFLFDSLLKATSKFAFSIDAVLFYRHM 120

Query: 121 LYSGVRQSNYTFTSVIKACADLSALRLGRGIHSHVMVCGYGSDMYVQAALIALYAKAGDM 180
           L+SGV QSNYTFTSVIKACADLSALRLGR IHSHVMVCGYGSDMYVQAALIALYAKA DM
Sbjct: 121 LFSGVPQSNYTFTSVIKACADLSALRLGREIHSHVMVCGYGSDMYVQAALIALYAKASDM 180

Query: 181 KVAKKVFDAMPQRTIIAWNSLISGYEQNGLPTEAMGLFHLMLESGFQPDPATIVSLLSSC 240
           KVAKKVFDAMPQRTIIAWNSLISGYEQNG P E++G+FHLMLESGFQPDP TIVSLLSSC
Sbjct: 181 KVAKKVFDAMPQRTIIAWNSLISGYEQNGFPKESIGIFHLMLESGFQPDPTTIVSLLSSC 240

Query: 241 SQLGALDFGCWLHDYANSNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWT 300
           SQLGALDFGCWLHDYAN NGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWT
Sbjct: 241 SQLGALDFGCWLHDYANGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWT 300

Query: 301 AMISGYGMHGYGEQAMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIGDGRRAFASMKDV 360
           AMISGYGMHG GEQAMKLFGEMRA+GPRPNNITFVAVLSACAHSGLI DGRR F+SMK+ 
Sbjct: 301 AMISGYGMHGNGEQAMKLFGEMRAHGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEA 360

Query: 361 YGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLPEEPGPAVWTSMLGACRMHKNFDLGV 420
           YGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLP+EPG AVWTSMLGACRMHKNFDLGV
Sbjct: 361 YGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLPKEPGAAVWTSMLGACRMHKNFDLGV 420

Query: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINRKT 480
           KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYS+IEINRKT
Sbjct: 421 KVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSSIEINRKT 480

Query: 481 YLFSMGDKSHPQTNTIYRYLDELMGRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLA 540
           YLFSMGDKSHPQT+TIYRYLDELMGRCSESGYVPAPESLMHDLE+EERDYALRYHSEK+A
Sbjct: 481 YLFSMGDKSHPQTSTIYRYLDELMGRCSESGYVPAPESLMHDLEDEERDYALRYHSEKVA 540

Query: 541 LAFGLLKTSQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKGGACSCL 600
           LAFGLL+T+QGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFK G+CSCL
Sbjct: 541 LAFGLLETNQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCL 599

Query: 601 DYW 604
           DYW
Sbjct: 601 DYW 599

BLAST of Lcy04g021350 vs. TAIR 10
Match: AT2G33760.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 762.7 bits (1968), Expect = 2.2e-220
Identity = 356/578 (61.59%), Postives = 459/578 (79.41%), Query Frame = 0

Query: 29  SHSPVHAALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKLLSLVCAAGSIAYARRLFPT 88
           ++S  + A+++AGPR++ LQQVHAH+IV+G+ RSRSLLTKL++L C+A +IAY   LF +
Sbjct: 7   ANSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLS 66

Query: 89  VPNPDLFLFDSLLKTTSKFGFSVDAVLFYRHMLYSGVRQSNYTFTSVIKACADLSALRLG 148
           VP PD FLF+S++K+TSK    +  V +YR ML S V  SNYTFTSVIK+CADLSALR+G
Sbjct: 67  VPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIG 126

Query: 149 RGIHSHVMVCGYGSDMYVQAALIALYAKAGDMKVAKKVFDAMPQRTIIAWNSLISGYEQN 208
           +G+H H +V G+G D YVQAAL+  Y+K GDM+ A++VFD MP+++I+AWNSL+SG+EQN
Sbjct: 127 KGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQN 186

Query: 209 GLPTEAMGLFHLMLESGFQPDPATIVSLLSSCSQLGALDFGCWLHDYANSNGFDLNVVLG 268
           GL  EA+ +F+ M ESGF+PD AT VSLLS+C+Q GA+  G W+H Y  S G DLNV LG
Sbjct: 187 GLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLG 246

Query: 269 TSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGEQAMKLFGEMR-AYGP 328
           T+LIN+Y+RCG+V KAREVFD MKE NV  WTAMIS YG HGYG+QA++LF +M    GP
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGP 306

Query: 329 RPNNITFVAVLSACAHSGLIGDGRRAFASMKDVYGLVPGVEHHVCMVDMFGRAGLLNDAY 388
            PNN+TFVAVLSACAH+GL+ +GR  +  M   Y L+PGVEHHVCMVDM GRAG L++AY
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAY 366

Query: 389 QFIKNF--LPEEPGPAVWTSMLGACRMHKNFDLGVKVAEHVLAVEPENPGHYVMLSNIYA 448
           +FI       +   PA+WT+MLGAC+MH+N+DLGV++A+ ++A+EP+NPGH+VMLSNIYA
Sbjct: 367 KFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYA 426

Query: 449 LAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMG 508
           L+G+ D V  +R+ M+R  L+KQVGYS IE+  KTY+FSMGD+SH +T  IYRYL+ L+ 
Sbjct: 427 LSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLIS 486

Query: 509 RCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTSQGETIRIVKNLRICED 568
           RC E GY P  E +MH +EEEE+++ALRYHSEKLA+AFGLLKT     I IVKNLRICED
Sbjct: 487 RCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICED 546

Query: 569 CHSAIKHISIIADREIIVRDKFRFHHFKGGACSCLDYW 604
           CHSA K+ISI+++R+I VRDK RFHHF+ G+CSCLDYW
Sbjct: 547 CHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583

BLAST of Lcy04g021350 vs. TAIR 10
Match: AT2G01510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 480.7 bits (1236), Expect = 1.7e-135
Identity = 237/591 (40.10%), Postives = 369/591 (62.44%), Query Frame = 0

Query: 15  LAFQHPLTHIFDSPSHSPVHAALLQAGPRLRNLQQVHAHIIVSGFHRSRSLLTKLLSLVC 74
           LA Q PLT          +   L  +  + + L+++HA ++ +GF    SLLT+LL  + 
Sbjct: 2   LAKQTPLT-------KQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLV 61

Query: 75  AAGSIAYARRLFPTVPNPDLFLFDSLLKTTSKFGFSVDAVLFYRHMLYSGVRQSNYTFTS 134
             G + YAR++F  +  P +FL+++L K   +     +++L Y+ M   GVR   +T+  
Sbjct: 62  VIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPF 121

Query: 135 VIKACADLSALRLGRGIHSHVMVCGYGSDMYVQAALIALYAKAGDMKVAKKVFDAMPQRT 194
           V+KA + L     G  +H+HV+  G+G    V   L+ +Y K G++  A+ +F++M  + 
Sbjct: 122 VVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKD 181

Query: 195 IIAWNSLISGYEQNGLPTEAMGLFHLMLESGFQPDPATIVSLLSSCSQLGALDFGCWLHD 254
           ++AWN+ ++   Q G    A+  F+ M     Q D  T+VS+LS+C QLG+L+ G  ++D
Sbjct: 182 LVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYD 241

Query: 255 YANSNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGEQ 314
            A     D N+++  + ++M+ +CGN   AR +F+ MK+RNVV+W+ MI GY M+G   +
Sbjct: 242 RARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSRE 301

Query: 315 AMKLFGEMRAYGPRPNNITFVAVLSACAHSGLIGDGRRAFASM--KDVYGLVPGVEHHVC 374
           A+ LF  M+  G RPN +TF+ VLSAC+H+GL+ +G+R F+ M   +   L P  EH+ C
Sbjct: 302 ALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYAC 361

Query: 375 MVDMFGRAGLLNDAYQFIKNFLPEEPGPAVWTSMLGACRMHKNFDLGVKVAEHVLAVEPE 434
           MVD+ GR+GLL +AY+FIK  +P EP   +W ++LGAC +H++  LG KVA+ ++   P+
Sbjct: 362 MVDLLGRSGLLEEAYEFIKK-MPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPD 421

Query: 435 NPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQ 494
              ++V+LSNIYA AG+ D V+ VR+ M +   KK   YS++E   K + F+ GDKSHPQ
Sbjct: 422 IGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQ 481

Query: 495 TNTIYRYLDELMGRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTSQGE 554
           +  IY  LDE++ +  + GYVP   S+ HD+E EE++ +L +HSEKLA+AFGL+K   G 
Sbjct: 482 SKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGH 541

Query: 555 TIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKGGACSCLDYW 604
            IR++KNLR C+DCH+  K +S +   EII+RDK RFHHF+ G CSC ++W
Sbjct: 542 PIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584

BLAST of Lcy04g021350 vs. TAIR 10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 479.2 bits (1232), Expect = 5.0e-135
Identity = 232/560 (41.43%), Postives = 351/560 (62.68%), Query Frame = 0

Query: 44  LRNLQQVHAHIIVSGFHRSRSLLTKLLSLVCAAGSIAYARRLFPTVPNPDLFLFDSLLKT 103
           LR   Q+H+    +G +    +LT  +SL    G I     LF     PD+  +++++  
Sbjct: 237 LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHG 296

Query: 104 TSKFGFSVDAVLFYRHMLYSGVRQSNYTFTSVIKACADLSALRLGRGIHSHVMVCGYGSD 163
            +  G +  ++  ++ ++ SG R  + T  S++     L  +     IH + +   + S 
Sbjct: 297 YTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSH 356

Query: 164 MYVQAALIALYAKAGDMKVAKKVFDAMPQRTIIAWNSLISGYEQNGLPTEAMGLFHLMLE 223
             V  AL  +Y+K  +++ A+K+FD  P++++ +WN++ISGY QNGL  +A+ LF  M +
Sbjct: 357 ASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK 416

Query: 224 SGFQPDPATIVSLLSSCSQLGALDFGCWLHDYANSNGFDLNVVLGTSLINMYTRCGNVSK 283
           S F P+P TI  +LS+C+QLGAL  G W+HD   S  F+ ++ + T+LI MY +CG++++
Sbjct: 417 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 476

Query: 284 AREVFDSMKERNVVTWTAMISGYGMHGYGEQAMKLFGEMRAYGPRPNNITFVAVLSACAH 343
           AR +FD M ++N VTW  MISGYG+HG G++A+ +F EM   G  P  +TF+ VL AC+H
Sbjct: 477 ARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSH 536

Query: 344 SGLIGDGRRAFASMKDVYGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLPEEPGPAVW 403
           +GL+ +G   F SM   YG  P V+H+ CMVD+ GRAG L  A QFI+  +  EPG +VW
Sbjct: 537 AGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIE-AMSIEPGSSVW 596

Query: 404 TSMLGACRMHKNFDLGVKVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRR 463
            ++LGACR+HK+ +L   V+E +  ++P+N G++V+LSNI++      +   VR    +R
Sbjct: 597 ETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKR 656

Query: 464 RLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMGRCSESGYVPAPESLMHDL 523
           +L K  GY+ IEI    ++F+ GD+SHPQ   IY  L++L G+  E+GY P  E  +HD+
Sbjct: 657 KLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDV 716

Query: 524 EEEERDYALRYHSEKLALAFGLLKTSQGETIRIVKNLRICEDCHSAIKHISIIADREIIV 583
           EEEER+  ++ HSE+LA+AFGL+ T  G  IRI+KNLR+C DCH+  K IS I +R I+V
Sbjct: 717 EEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVV 776

Query: 584 RDKFRFHHFKGGACSCLDYW 604
           RD  RFHHFK G CSC DYW
Sbjct: 777 RDANRFHHFKDGVCSCGDYW 792

BLAST of Lcy04g021350 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 474.2 bits (1219), Expect = 1.6e-133
Identity = 237/568 (41.73%), Postives = 365/568 (64.26%), Query Frame = 0

Query: 44  LRNLQQVHAHII-----VSGFHRSRSLLTKLLSLVCAAGSIAYARRLFPTVPNP-DLFLF 103
           +  L+Q+HA  I     +S     + L+  L+SL  +   ++YA ++F  +  P ++F++
Sbjct: 30  ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLP-SPPPMSYAHKVFSKIEKPINVFIW 89

Query: 104 DSLLKTTSKFGFSVDAVLFYRHMLYSG-VRQSNYTFTSVIKACADLSALRLGRGIHSHVM 163
           ++L++  ++ G S+ A   YR M  SG V    +T+  +IKA   ++ +RLG  IHS V+
Sbjct: 90  NTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 149

Query: 164 VCGYGSDMYVQAALIALYAKAGDMKVAKKVFDAMPQRTIIAWNSLISGYEQNGLPTEAMG 223
             G+GS +YVQ +L+ LYA  GD+  A KVFD MP++ ++AWNS+I+G+ +NG P EA+ 
Sbjct: 150 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 209

Query: 224 LFHLMLESGFQPDPATIVSLLSSCSQLGALDFGCWLHDYANSNGFDLNVVLGTSLINMYT 283
           L+  M   G +PD  TIVSLLS+C+++GAL  G  +H Y    G   N+     L+++Y 
Sbjct: 210 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 269

Query: 284 RCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGEQAMKLFGEMRA-YGPRPNNITFV 343
           RCG V +A+ +FD M ++N V+WT++I G  ++G+G++A++LF  M +  G  P  ITFV
Sbjct: 270 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 329

Query: 344 AVLSACAHSGLIGDGRRAFASMKDVYGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLP 403
            +L AC+H G++ +G   F  M++ Y + P +EH  CMVD+  RAG +  AY++IK+ +P
Sbjct: 330 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS-MP 389

Query: 404 EEPGPAVWTSMLGACRMHKNFDLGVKVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEM 463
            +P   +W ++LGAC +H + DL       +L +EP + G YV+LSN+YA   R   V+ 
Sbjct: 390 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 449

Query: 464 VRNMMIRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMGRCSESGYVPA 523
           +R  M+R  +KK  G+S +E+  + + F MGDKSHPQ++ IY  L E+ GR    GYVP 
Sbjct: 450 IRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQ 509

Query: 524 PESLMHDLEEEERDYALRYHSEKLALAFGLLKTSQGETIRIVKNLRICEDCHSAIKHISI 583
             ++  D+EEEE++ A+ YHSEK+A+AF L+ T +   I +VKNLR+C DCH AIK +S 
Sbjct: 510 ISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSK 569

Query: 584 IADREIIVRDKFRFHHFKGGACSCLDYW 604
           + +REI+VRD+ RFHHFK G+CSC DYW
Sbjct: 570 VYNREIVVRDRSRFHHFKNGSCSCQDYW 595

BLAST of Lcy04g021350 vs. TAIR 10
Match: AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 472.6 bits (1215), Expect = 4.6e-133
Identity = 242/605 (40.00%), Postives = 364/605 (60.17%), Query Frame = 0

Query: 35  AALLQAGPRLRNLQQVHAHIIVSGF---HRSRSLLTKLLSLVCAAGSIAYARRLFPTVPN 94
           A L+     +  + Q+HA I+        R   L  KL     + G I ++  LF    +
Sbjct: 33  AVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTID 92

Query: 95  PDLFLFDSLLKTTSKFGFSVDAVLFYRHMLYSGVRQSNYTFTSVIKACADLSALRLGRGI 154
           PDLFLF + + T S  G    A L Y  +L S +  + +TF+S++K+C+  S    G+ I
Sbjct: 93  PDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLI 152

Query: 155 HSHVMVCGYGSDMYVQAALIALYAKAGDMKVAKKVFDAMPQRT----------------- 214
           H+HV+  G G D YV   L+ +YAK GD+  A+KVFD MP+R+                 
Sbjct: 153 HTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNV 212

Query: 215 --------------IIAWNSLISGYEQNGLPTEAMGLFHLMLESGF-QPDPATIVSLLSS 274
                         I++WN +I GY Q+G P +A+ LF  +L  G  +PD  T+V+ LS+
Sbjct: 213 EAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSA 272

Query: 275 CSQLGALDFGCWLHDYANSNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTW 334
           CSQ+GAL+ G W+H +  S+   LNV + T LI+MY++CG++ +A  VF+    +++V W
Sbjct: 273 CSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAW 332

Query: 335 TAMISGYGMHGYGEQAMKLFGEMRAY-GPRPNNITFVAVLSACAHSGLIGDGRRAFASMK 394
            AMI+GY MHGY + A++LF EM+   G +P +ITF+  L ACAH+GL+ +G R F SM 
Sbjct: 333 NAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMG 392

Query: 395 DVYGLVPGVEHHVCMVDMFGRAGLLNDAYQFIKNFLPEEPGPAVWTSMLGACRMHKNFDL 454
             YG+ P +EH+ C+V + GRAG L  AY+ IKN +  +    +W+S+LG+C++H +F L
Sbjct: 393 QEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKN-MNMDADSVLWSSVLGSCKLHGDFVL 452

Query: 455 GVKVAEHVLAVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMIRRRLKKQVGYSTIEINR 514
           G ++AE+++ +  +N G YV+LSNIYA  G  + V  VRN+M  + + K+ G STIEI  
Sbjct: 453 GKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIEN 512

Query: 515 KTYLFSMGDKSHPQTNTIYRYLDELMGRCSESGYVPAPESLMHDLEEEERDYALRYHSEK 574
           K + F  GD+ H ++  IY  L ++  R    GYVP   +++ DLEE E++ +L+ HSE+
Sbjct: 513 KVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSER 572

Query: 575 LALAFGLLKTSQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKGGACS 604
           LA+A+GL+ T  G  ++I KNLR+C DCH+  K IS I  R+I++RD+ RFHHF  G+CS
Sbjct: 573 LAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCS 632

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P930113.2e-21961.59Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX... [more]
Q9ZVF42.4e-13440.10Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidop... [more]
Q9SUH67.0e-13441.43Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... [more]
A8MQA32.2e-13241.73Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... [more]
Q9SZT86.5e-13240.00Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... [more]
Match NameE-valueIdentityDescription
A0A6J1EL350.0e+0091.04pentatricopeptide repeat-containing protein At2g33760 isoform X1 OS=Cucurbita mo... [more]
A0A5D3CPN10.0e+0089.72Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S4DTH40.0e+0089.72pentatricopeptide repeat-containing protein At2g33760 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1KND50.0e+0090.24pentatricopeptide repeat-containing protein At2g33760 OS=Cucurbita maxima OX=366... [more]
A0A6J1CMK40.0e+0088.08pentatricopeptide repeat-containing protein At2g33760 OS=Momordica charantia OX=... [more]
Match NameE-valueIdentityDescription
XP_023517887.10.0e+0091.04pentatricopeptide repeat-containing protein At2g33760 [Cucurbita pepo subsp. pep... [more]
XP_022926430.10.0e+0091.04pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Cucurbita mosc... [more]
KAG6594603.10.0e+0091.04Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_038881818.10.0e+0091.21pentatricopeptide repeat-containing protein At2g33760 isoform X1 [Benincasa hisp... [more]
XP_038881841.10.0e+0091.38pentatricopeptide repeat-containing protein At2g33760 isoform X3 [Benincasa hisp... [more]
Match NameE-valueIdentityDescription
AT2G33760.12.2e-22061.59Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G01510.11.7e-13540.10Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G30700.15.0e-13541.43Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G21065.11.6e-13341.73Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G37380.14.6e-13340.00Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 169..193
e-value: 0.019
score: 15.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 294..342
e-value: 2.0E-12
score: 47.1
coord: 194..240
e-value: 2.1E-9
score: 37.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 269..297
e-value: 3.8E-6
score: 24.7
coord: 297..330
e-value: 2.9E-7
score: 28.2
coord: 197..229
e-value: 3.8E-8
score: 31.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 194..228
score: 12.145178
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 295..329
score: 12.024604
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 264..294
score: 9.328124
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 143..246
e-value: 1.1E-21
score: 79.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 30..142
e-value: 3.0E-9
score: 38.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 362..527
e-value: 2.0E-7
score: 32.8
coord: 247..361
e-value: 9.4E-30
score: 106.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 274..452
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 470..593
e-value: 2.7E-39
score: 134.0
NoneNo IPR availablePANTHERPTHR47924:SF35SUBFAMILY NOT NAMEDcoord: 27..597
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 27..597

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy04g021350.1Lcy04g021350.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding