Lcy04g019630 (gene) Sponge gourd (P93075) v1

Overview
NameLcy04g019630
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr04: 51338306 .. 51338731 (+)
RNA-Seq ExpressionLcy04g019630
SyntenyLcy04g019630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAATTGCATCGACAAATCCCATTTCCTACCACTGCAAAAGATCAAAGATTTCGTTTGCTGTGAGGGAGAAGACTTCAATTTGGCTTTGCCAATTGAAAAGATAGCTTGTGGGGCTTATGAAGGCCTAAAGCTAACAAGTCAAGCCTTTACAACTTCGAGTGCTGTGCTAGAAGTTGGGCGTGGGGCTCCTCCACTGCCTGTTCGTGTTGATGATGCTATTCTCAAGCCTGCAGATTTGTGCAAACTTCGCAAGGCTACAATTGTGGTCAGCAAAGAACAGCTTGAGTTGCTTTTGAGAAACTCCAAAAAGTTTGGCTCCAAAGGCATTGCTGTTCAGTTCTCTGATACTTTCCAGTTCGACGAACCATGCCCCAGATGGCGCCCGGCCTTGCCCACGATTCCGGAGGTTCACAATTTTTAG

mRNA sequence

ATGGGAAATTGCATCGACAAATCCCATTTCCTACCACTGCAAAAGATCAAAGATTTCGTTTGCTGTGAGGGAGAAGACTTCAATTTGGCTTTGCCAATTGAAAAGATAGCTTGTGGGGCTTATGAAGGCCTAAAGCTAACAAGTCAAGCCTTTACAACTTCGAGTGCTGTGCTAGAAGTTGGGCGTGGGGCTCCTCCACTGCCTGTTCGTGTTGATGATGCTATTCTCAAGCCTGCAGATTTGTGCAAACTTCGCAAGGCTACAATTGTGGTCAGCAAAGAACAGCTTGAGTTGCTTTTGAGAAACTCCAAAAAGTTTGGCTCCAAAGGCATTGCTGTTCAGTTCTCTGATACTTTCCAGTTCGACGAACCATGCCCCAGATGGCGCCCGGCCTTGCCCACGATTCCGGAGGTTCACAATTTTTAG

Coding sequence (CDS)

ATGGGAAATTGCATCGACAAATCCCATTTCCTACCACTGCAAAAGATCAAAGATTTCGTTTGCTGTGAGGGAGAAGACTTCAATTTGGCTTTGCCAATTGAAAAGATAGCTTGTGGGGCTTATGAAGGCCTAAAGCTAACAAGTCAAGCCTTTACAACTTCGAGTGCTGTGCTAGAAGTTGGGCGTGGGGCTCCTCCACTGCCTGTTCGTGTTGATGATGCTATTCTCAAGCCTGCAGATTTGTGCAAACTTCGCAAGGCTACAATTGTGGTCAGCAAAGAACAGCTTGAGTTGCTTTTGAGAAACTCCAAAAAGTTTGGCTCCAAAGGCATTGCTGTTCAGTTCTCTGATACTTTCCAGTTCGACGAACCATGCCCCAGATGGCGCCCGGCCTTGCCCACGATTCCGGAGGTTCACAATTTTTAG

Protein sequence

MGNCIDKSHFLPLQKIKDFVCCEGEDFNLALPIEKIACGAYEGLKLTSQAFTTSSAVLEVGRGAPPLPVRVDDAILKPADLCKLRKATIVVSKEQLELLLRNSKKFGSKGIAVQFSDTFQFDEPCPRWRPALPTIPEVHNF
Homology
BLAST of Lcy04g019630 vs. ExPASy TrEMBL
Match: A0A0A0KHP3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511050 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 6.0e-47
Identity = 99/143 (69.23%), Postives = 111/143 (77.62%), Query Frame = 0

Query: 1   MGNCIDKSHFLPLQKIKDFVCCEGEDFNLALPIEKIACGAYEGLKLTSQAFTTSSAV--L 60
           MGNCI+  HF PLQKIK F+CCE ED NLALPIE IA          +QAFTTSSAV   
Sbjct: 1   MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAA-------CKNQAFTTSSAVAEA 60

Query: 61  EVGRGAPPLPVRVDDAILKPADLCKLRKATIVVSKEQLELLLRNSKKFGSKGIAVQFSDT 120
           EV  G PPLPVR+D +I+KPADLCKL K TIVVSK+QLEL+LR SK FGSKGIAVQFSD+
Sbjct: 61  EVEHGPPPLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDS 120

Query: 121 FQFDEPCPRWRPALPTIPEVHNF 142
           F+ D+ CPRW PALPTIPEV N+
Sbjct: 121 FKVDDGCPRWHPALPTIPEVRNY 136

BLAST of Lcy04g019630 vs. ExPASy TrEMBL
Match: A0A5D3CLY8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00250 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.2e-44
Identity = 96/141 (68.09%), Postives = 108/141 (76.60%), Query Frame = 0

Query: 1   MGNCIDKSHFLPLQKIKDFVCCEGEDFNLALPIEKIACGAYEGLKLTSQAFTTSSAVLEV 60
           MGNCI+  HF PLQKIK F+CCE E  +L LPI  +A  AY   K  SQAFTTSSAV EV
Sbjct: 1   MGNCINTHHFPPLQKIKGFICCEVEGLDLGLPIGNVA--AYGDCK--SQAFTTSSAVAEV 60

Query: 61  GRGAPPLPVRVDDAILKPADLCKLRKATIVVSKEQLELLLRNSKKFGSKGIAVQFSDTFQ 120
               PPLPVR+D +I+KPAD  KL KATIVVSK+QLEL+LR SK FGSKGIAVQFSD F+
Sbjct: 61  QHSPPPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKSKNFGSKGIAVQFSDRFK 120

Query: 121 FDEPCPRWRPALPTIPEVHNF 142
            D+ CPRW PALPTIPEV N+
Sbjct: 121 VDDGCPRWHPALPTIPEVRNY 137

BLAST of Lcy04g019630 vs. ExPASy TrEMBL
Match: A0A6A1W907 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G006267 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15
Identity = 60/157 (38.22%), Postives = 80/157 (50.96%), Query Frame = 0

Query: 1   MGNCIDKSHFLPLQKIKDFVCCEGE-DFNLALPIEKIACGAYEGLKLTSQAFTTSSAV-- 60
           MGNC D       +KI+  V  EGE +F+   P+EKI CG Y G KL   +   S  +  
Sbjct: 1   MGNCADVMLRPTEEKIRVLVFNEGEKEFSARTPVEKITCGPYSGFKLVHHSQPDSPLLPD 60

Query: 61  -------------LEVGRGAPPLPVRVDDAILKPADLCKLRKATIVVSKEQLELLLRNSK 120
                        L+     PP+P R  +      +  K +K  IVV+K QLELLLR++ 
Sbjct: 61  ARLQPGELYYLVPLQAQPHHPPIPSRTAN-----QETGKQKKVKIVVTKGQLELLLRSTD 120

Query: 121 KFGSKGIAVQFSDTFQFDEPCPRWRPALPTIPEVHNF 142
           KF SK IA+    +FQ  E   +WRP+L  IPEVH+F
Sbjct: 121 KFKSKDIAIHCLGSFQVGEGRRKWRPSLTMIPEVHSF 152

BLAST of Lcy04g019630 vs. ExPASy TrEMBL
Match: A0A5N6Q7Y4 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_000047 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.6e-15
Identity = 64/153 (41.83%), Postives = 83/153 (54.25%), Query Frame = 0

Query: 1   MGNCIDKSHFLPLQKIKDFVCCEGE-DFNLALPIEKIACGAYEGLKLTSQAFTTS----S 60
           MGNCID     P +KI+  +   GE +F  + P+EKI CG Y G KL   A   S    +
Sbjct: 31  MGNCIDVLLHPPEEKIRVLIFNGGEKEFIASTPVEKITCGPYNGFKLVHHAQPYSPLAPN 90

Query: 61  AVLEVGRGAPPLPVRVD------DAILKPADLCKLRKATIVVSKEQLELLLRNSKKFGSK 120
             LE G     +P++         +     D  K RK  IVV+KEQLELLLR++KKF S 
Sbjct: 91  TRLEPGEVYYLVPLQPQPHHPSVTSRTANHDTGKRRKVKIVVTKEQLELLLRSTKKFQSS 150

Query: 121 GIAVQFSDTFQFD-EPCPRWRPALPTIPEVHNF 142
            IA Q   + Q D E C +W+P+L TI EVH+F
Sbjct: 151 VIAGQILGSSQVDVEGCRKWQPSLATIHEVHSF 183

BLAST of Lcy04g019630 vs. ExPASy TrEMBL
Match: B9HD50 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G018200 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.0e-14
Identity = 62/152 (40.79%), Postives = 84/152 (55.26%), Query Frame = 0

Query: 1   MGNCIDKSHFLPLQKIKDFVCCEGE-DFNLALPIEKIACGAYEGLKLTSQAF----TTSS 60
           MGNCID   +   ++ K  +   GE +F  +  ++KI  G Y G  L   A         
Sbjct: 1   MGNCIDVLSYSSAERSKVLIHNGGEKEFKSSTRVKKITSGRYGGYMLVHSALPYVPLPPD 60

Query: 61  AVLEVG---RGAPPL--PVRVD-DAILKPADLCKLRKATIVVSKEQLELLLRNSKKFGSK 120
             LE G      P L  P R++  + L   + C  RK  IVV+++QLELLLRNSK+F SK
Sbjct: 61  TRLEPGVVYYLMPSLGQPCRLEVSSKLAGQETCASRKVKIVVTRQQLELLLRNSKQFRSK 120

Query: 121 GIAVQFSDTFQFDEPCPRWRPALPTIPEVHNF 142
           GIAV+FS++F+  E   +WRP+L TIPEV  F
Sbjct: 121 GIAVRFSESFKEGE--RKWRPSLVTIPEVQKF 150

BLAST of Lcy04g019630 vs. NCBI nr
Match: KAG6603830.1 (hypothetical protein SDJN03_04439, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.4 bits (498), Expect = 1.6e-46
Identity = 100/144 (69.44%), Postives = 114/144 (79.17%), Query Frame = 0

Query: 1   MGNCIDKSHFLPLQKIKDFVCCEGEDFNLALPIEKIACGAYEGLKLTSQAFTTSSAVLEV 60
           MGNCI+ +HF PLQK+KD +CCEGED +LALPIEKIA GAY          TTSSAVLEV
Sbjct: 1   MGNCINTAHFRPLQKLKDLICCEGEDLSLALPIEKIASGAY----------TTSSAVLEV 60

Query: 61  GRGAPPLPVRV--DDAILKPADLCKLRK-ATIVVSKEQLELLLRNSKKFGSKGIAVQFSD 120
            RGAPPLPV +  DDA+ KP  LCKL K  TIVVSK+QLEL+LRNS+KF SKGIAVQFSD
Sbjct: 61  DRGAPPLPVSIDDDDAVSKPDALCKLPKTTTIVVSKQQLELILRNSRKFASKGIAVQFSD 120

Query: 121 TFQFDEPCPRWRPALPTIPEVHNF 142
           +F+ D+ CPRW PALPTI EVHN+
Sbjct: 121 SFEVDDRCPRWCPALPTILEVHNY 134

BLAST of Lcy04g019630 vs. NCBI nr
Match: KAE8647639.1 (hypothetical protein Csa_004428 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 6.8e-45
Identity = 97/139 (69.78%), Postives = 108/139 (77.70%), Query Frame = 0

Query: 1   MGNCIDKSHFLPLQKIKDFVCCEGEDFNLALPIEKIACGAYEGLKLTSQAFTTSSAV--L 60
           MGNCI+  HF PLQKIK F+CCE ED NLALPIE IA          +QAFTTSSAV   
Sbjct: 1   MGNCINTLHFPPLQKIKGFICCEVEDLNLALPIENIAA-------CKNQAFTTSSAVAEA 60

Query: 61  EVGRGAPPLPVRVDDAILKPADLCKLRKATIVVSKEQLELLLRNSKKFGSKGIAVQFSDT 120
           EV  G PPLPVR+D +I+KPADLCKL K TIVVSK+QLEL+LR SK FGSKGIAVQFSD+
Sbjct: 61  EVEHGPPPLPVRIDHSIVKPADLCKLPKTTIVVSKQQLELILRKSKNFGSKGIAVQFSDS 120

Query: 121 FQFDEPCPRWRPALPTIPE 138
           F+ D+ CPRW PALPTIPE
Sbjct: 121 FKVDDGCPRWHPALPTIPE 132

BLAST of Lcy04g019630 vs. NCBI nr
Match: KAA0025575.1 (hypothetical protein E6C27_scaffold253G00640 [Cucumis melo var. makuwa] >TYK12450.1 hypothetical protein E5676_scaffold255G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 189.1 bits (479), Expect = 2.6e-44
Identity = 96/141 (68.09%), Postives = 108/141 (76.60%), Query Frame = 0

Query: 1   MGNCIDKSHFLPLQKIKDFVCCEGEDFNLALPIEKIACGAYEGLKLTSQAFTTSSAVLEV 60
           MGNCI+  HF PLQKIK F+CCE E  +L LPI  +A  AY   K  SQAFTTSSAV EV
Sbjct: 1   MGNCINTHHFPPLQKIKGFICCEVEGLDLGLPIGNVA--AYGDCK--SQAFTTSSAVAEV 60

Query: 61  GRGAPPLPVRVDDAILKPADLCKLRKATIVVSKEQLELLLRNSKKFGSKGIAVQFSDTFQ 120
               PPLPVR+D +I+KPAD  KL KATIVVSK+QLEL+LR SK FGSKGIAVQFSD F+
Sbjct: 61  QHSPPPLPVRIDHSIVKPADKSKLPKATIVVSKQQLELILRKSKNFGSKGIAVQFSDRFK 120

Query: 121 FDEPCPRWRPALPTIPEVHNF 142
            D+ CPRW PALPTIPEV N+
Sbjct: 121 VDDGCPRWHPALPTIPEVRNY 137

BLAST of Lcy04g019630 vs. NCBI nr
Match: KAG6594706.1 (hypothetical protein SDJN03_11259, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139.0 bits (349), Expect = 3.1e-29
Identity = 82/145 (56.55%), Postives = 92/145 (63.45%), Query Frame = 0

Query: 1   MGNCIDKSHFLPLQKIKDFVCCEGEDFNLALPIEKIACGAYEGLKLTSQAFTTSSAVLEV 60
           MGNCI   H                 ++LA+P+EKIA     GLKLT       SAVLEV
Sbjct: 1   MGNCISSPHL----------------YDLAVPVEKIA-----GLKLT-------SAVLEV 60

Query: 61  GRGAPPLPVRV----DDAILKPADLCKLRKATIVVSKEQLELLLRNSKKFGSKGIAVQFS 120
           GRGA   P  V    DD I KPA LCKL KATIVVSKEQLE LL NS++FGS+GIAVQFS
Sbjct: 61  GRGAATPPAHVLIDDDDDITKPAALCKLPKATIVVSKEQLEFLLTNSQQFGSQGIAVQFS 117

Query: 121 DTFQFDEPCPRWRPALPTIPEVHNF 142
           D+F+FD  C RW P LPTI EVHN+
Sbjct: 121 DSFKFDRSCSRWCPVLPTILEVHNY 117

BLAST of Lcy04g019630 vs. NCBI nr
Match: KAB1221694.1 (hypothetical protein CJ030_MR2G006267 [Morella rubra] >KAB1221701.1 hypothetical protein CJ030_MR2G006274 [Morella rubra])

HSP 1 Score: 92.8 bits (229), Expect = 2.5e-15
Identity = 60/157 (38.22%), Postives = 80/157 (50.96%), Query Frame = 0

Query: 1   MGNCIDKSHFLPLQKIKDFVCCEGE-DFNLALPIEKIACGAYEGLKLTSQAFTTSSAV-- 60
           MGNC D       +KI+  V  EGE +F+   P+EKI CG Y G KL   +   S  +  
Sbjct: 1   MGNCADVMLRPTEEKIRVLVFNEGEKEFSARTPVEKITCGPYSGFKLVHHSQPDSPLLPD 60

Query: 61  -------------LEVGRGAPPLPVRVDDAILKPADLCKLRKATIVVSKEQLELLLRNSK 120
                        L+     PP+P R  +      +  K +K  IVV+K QLELLLR++ 
Sbjct: 61  ARLQPGELYYLVPLQAQPHHPPIPSRTAN-----QETGKQKKVKIVVTKGQLELLLRSTD 120

Query: 121 KFGSKGIAVQFSDTFQFDEPCPRWRPALPTIPEVHNF 142
           KF SK IA+    +FQ  E   +WRP+L  IPEVH+F
Sbjct: 121 KFKSKDIAIHCLGSFQVGEGRRKWRPSLTMIPEVHSF 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KHP36.0e-4769.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511050 PE=4 SV=1[more]
A0A5D3CLY81.2e-4468.09Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6A1W9071.2e-1538.22Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR2G006267 PE=4 SV=1[more]
A0A5N6Q7Y41.6e-1541.83Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_000047 PE=4 SV=1[more]
B9HD503.0e-1440.79Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G018200 PE=4 ... [more]
Match NameE-valueIdentityDescription
KAG6603830.11.6e-4669.44hypothetical protein SDJN03_04439, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8647639.16.8e-4569.78hypothetical protein Csa_004428 [Cucumis sativus][more]
KAA0025575.12.6e-4468.09hypothetical protein E6C27_scaffold253G00640 [Cucumis melo var. makuwa] >TYK1245... [more]
KAG6594706.13.1e-2956.55hypothetical protein SDJN03_11259, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAB1221694.12.5e-1538.22hypothetical protein CJ030_MR2G006267 [Morella rubra] >KAB1221701.1 hypothetical... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33148:SF50SUBFAMILY NOT NAMEDcoord: 1..139
NoneNo IPR availablePANTHERPTHR33148PLASTID MOVEMENT IMPAIRED PROTEIN-RELATEDcoord: 1..139

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy04g019630.1Lcy04g019630.1mRNA