Lcy04g018400 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGCCAATTGATGGTTTGAGCGTTTATCCAAACACTCTCCAACCATTTTTTTCAGAAAAAAAAAAATTGAAGGAAGGGTGTACAGGATTGGAGTACTAACGGGAGCACCGAAAAGTAACCCTTTTGTTATGATGTAGATTGGTTCGGGCCCGGGGCATCCTCGTGGTCGTGGCTCGTGGAGTGCACGATTTGGTGCTGGATTTTGTGGTATAGTGGAGATGTTGGCGTAAGCGCTTTTCTTTCTTTTCCCTCTTCTCCTTTCCCTTTACCTCTCTATTTCATTTTTCCGGCGCTGAATTTTCACCCCAGATTGCATTTTCCCTTTCGTTTTCCAGATTTCCCTTTCTCTTTCTCTTTCTCTTTCTCTGTTGGACGAATCAGAGGAATTAAGCTCTGAGTTTTATTTACTCGCTGCTTTGCTCTGTGTAAGACCATTTTTTGTTTTTGGGATCGCCATGGAGCAGTGGAAGACTGGTGATTTCTCTCAATCTATTGTTGCAGCTGATTTAGTTCCTTCCTCGTCTCTTCAGCCGCAGCCTCTCTCTGTGTCCTCGAATCGCCACCATAACAGCCAGCTTCCTGAATCCAGGTTTGTGTGGATTCTGGGTTTTGATTAACATTGAGCTTATTTGATGTCTTGAATCTGGAGTAAAGAGTTTTGGATGGGTTTTAGGTTAAGTCAAATGCTTGTCTTCATATTTTGTATTTTGAGGTACTGATAATCGATCTTCCTTGGGATAAGGATGAGTTTTTATTGACTTAGTCTGTTGTTGAATCTAAGCCCAGATGAAATTTTCAGCGGTTTCTTGTCTTTGGGTTGTCTGGTTGCTTGGGAATAAAGGTGTTTGGTTTTGACGCTTTTCGTATCTTTGAGTTGGTTCGCACTAGTGAGAACGATGCTCCACGATTCAATTTGTGCGTTTCAAAGTATGAATTGTAATGAACGGAATGATACGAAGCAGCCTTTGTCTAGTTGGCTGGACATTCTAATTCTTCATATATATCATTTTTTTATTCCTTCTTCACAATTATCATTAAGCCCCGTTTAGTTACTATTTTGATTTTATGAACTAAGCATGTTTAGTCACTATTTCCTTGTTTTGTCTTTCCACCCTTTTAAGAAACACTTTTGAATTTTTAGCCAAATTTCGAGAACATCTTTTTAGGGAAAAAAAATAGTGTATAGTTTTCAAAAGTTGATATAGATTATAAAACAAAACAGAAAATAGTGAGTAAATAAGTTAAACTTTGGATCAGAAACAAAATTTCATTGATAAATGAAATTACAGAGAGAGGAAAAAGCACTTCCAGCCACCTATGATGGATTACAAAAACGATCGCCAATTAGAAATTAGAAACCAGGGAAGTAAGTGAGTAATCTTTAAGTTTGAATTACATTTGCACCAAGAAAAAACAGTAAAAAAGAGCGTATCCATAACCCTATGGAAAAGAGTCTTCAAACCATTGAAAAACCCATTATTTCTTTGGCCCCACAAATCCATAAAGTTGCTCTATTGATAGCACTCCAAAGCAACTTCTAAGACTCCTTGAAAGGATGACCCTCAAAAGAAATGTCAGTTAATTGAAAAACTCTTATGATACTGAACTAGCACAAGAAATTATGTGGCTCCAGAAACTTGACTGTTTCATCTTAAGCAAAGGGATCATTTTGGAAAGCTGTCATATAAATGAAGAAAGAGACGCGGTCCTTTTGAATGGCATGGACTGATCAAAGAAACATGAACTGAAAGCATATTAGGGATTCGTTTGTTGATGGACATCTTTCATTTTTCATGCTGTAGGATTATGACACTTTTCTCAAGTCTCAATCATGGTTTTCATCTCACTTGTTTTCACTTTTCATCCTCCTTTTTTGGCATTCCTCAGGTTAAGAACAGATGCGGAAGTAAAAGATCCAATAGCAGTGAGAAAAATTCAGAAGGCAGATCGTGAAAAATTGAGGAGAGACAGACTGAATGAACACTTTCTTGAGCTAGGAAACACATTAGGTAAAGTATATGAAGCCTATGATTTTTATTTTCCTCCTTTGTCTCTGTTATACTTAGATTTGACTTTTTCTTTGTTACACTAAAAATTCACCTAAAAGTTACTCGAGAAATGGCTTATCATTTGCCTTAATAAATTGAGAGAGTATGATAATTAGCCGAGAAAGCATATCATTGTTTGTTTCTCCATACACTTTTACTTCAGTGATGCACTTTATATTAATTTGCTATCTAGTAACCTTTAGAACTCAAGGAAACAGTTGCACAACTTATAGAATCGACCCCTCTTAAAGTAAGGTCATTTTTGCTATCTAGTAATCTAGAACAACGTACTGTAGAATTACAGAGCTTAACAAATTCTTAGGAATGAATTTTTAGTGCTAGGATAAGTTGCATTGATTTTCAAATTTCAACTAGTTCATTCAACTCGTCCATATACGTCTTCTCTTGCTAACTTCCTTTGTGGAATGCATTTCACTGGTTTCATTTTACATTTCTATCTTCTAATTGGCAGTATAGTGATAAATTGATAATGAATGCATGTACGCACTTGGCTTTTAATAAAATGTCGTTCCTGTAGGGTTTACTTACAGTTCATCATAATGCTGTGGACTTCTCTGGCTGTGTTATTTAGTTTATGGCTGGCTCACATCGGTTTTGTGTTTCTAACTTAAAGTGGCATCGTTGCTATTCAATGTTTATTGCAGATCCAGATAGGCCCAAAAATGACAAGGCTACCATCCTTACAGACACCATCCAGATGCTGAAGGATTTAACTGCCGAAGTCAATAGATTGAAGGCTGACTATGAAGCTCTTTCTGAAGAATCACGTGAGGTTGATATCTAATTCTTTTACAAATTTTTACTTCATAAGGTTAGGGGCCCTCTGCTCATCTCATCTAGTATTCCACAGCTAACTCAGGAAAAGAATGAGCTTAGAGAAGAGAAGGCTTCACTAAAATCAGATATTGAAAATCTAAATGCCCAGTATCAACAAAGACTGAGAGTCATGTTTCCCTGGGCTACAATGGATCCTTCAGTGGTTATGGGGCCCCCATATTCATACCCCGTTCCCGTTCCCGTTCCCCCAGGACCAATTCCCATGCATCCGTCATTGCAGCCCTTCACCTTCTTTGGCAATCAGAATCCTGGTGCTATTCCTAACCCCTGTTCGACGTTTGTCCCATATACTGCTGCTGCCAATCATCCGGTTGAACAGCCCTCTGCCCAATATGCGTCCAATTCACATGTCTCCAGCAAACAAGATTCCAGAAGTAAGTCATCAGATCAGCAAAGGCGTAGTAATGCAGAAAGATGCGACGAATCTAATGATGTAGCAACAGACCTTGAACTTAAGATGCCTGGATCTTCAACGCAACAGGTGACTTTTACTGCTTTTAAAACACCATATAAGTTTTTGTAGATCAAATAAGAACATTATTGAATATGTTTTCAGGATGCATCCTCTGGAAGTAAGAAAGGTAAGCAGTCACAGAGGAAAGAAAAAAGTGTCACCGATTGTAGTTCTTCGAGTAGGTTTTCTTCATCCCCAGTTCTTCAAGATAGCTCCTCTAACAGTGTTAGCGACATCCCGAAACAGAACAACTGAATTCAAGGTTACTAACCTCATCAAAGTGATTAGATTCAAGGTGGTTTCTTCCTTCACCAACCAAATATTGAGTTCAGAATTTCTGTTTCAGAGCTCTAGCTCTAGCTCGCACATCAAAATGAGTGGCATTCCTCCTTCAGTAATTACATGCCCAAACTAGGGCTATCGATCATGAGGTGCGAGATATTGCGACTGTTAACGACGTCTAATTTAACGAGGCTTACCGTATATTTAAGTAATATTGTTATAGGCTGACATTGACAGCATTTGTCCAGTAGAGACCCTGCATTTAGGGAGTGGTTCAGTGGAATATCTGCTTGTAAATTATGGCAAGACTCTATGCAGAGGCCATTCATGTTGAAAACCATTTAGTTAGTTCTTGTAATGGTCAAATCCAAAAAGCCTTCTCAAGTGAAGCTGGAAAATTTAACTCCTGAATAAGTCGTCAATCAATGAGCAAGGAATTGTAACAACATAAATCATCTATGTTTCCAATCACCACTTATAAATTTATTGTCACTAATAGTTCATATTTGTGATTGAAGTACTAGGGTGTTTGGCTCATGCTTAGTCAAAGAAGTTGAATTTATACCCTTTTTTTTTTTTTGACAATATATGGGGTGGGGGATTC GGGCCAATTGATGGTTTGAGCGTTTATCCAAACACTCTCCAACCATTTTTTTCAGAAAAAAAAAAATTGAAGGAAGGGTGTACAGGATTGGAGTACTAACGGGAGCACCGAAAAGTAACCCTTTTGTTATGATGTAGATTGGTTCGGGCCCGGGGCATCCTCGTGGTCGTGGCTCGTGGAGTGCACGATTTGGTGCTGGATTTTGTGGTATAGTGGAGATGTTGGCGTAAGCGCTTTTCTTTCTTTTCCCTCTTCTCCTTTCCCTTTACCTCTCTATTTCATTTTTCCGGCGCTGAATTTTCACCCCAGATTGCATTTTCCCTTTCGTTTTCCAGATTTCCCTTTCTCTTTCTCTTTCTCTTTCTCTGTTGGACGAATCAGAGGAATTAAGCTCTGAGTTTTATTTACTCGCTGCTTTGCTCTGTGTAAGACCATTTTTTGTTTTTGGGATCGCCATGGAGCAGTGGAAGACTGGTGATTTCTCTCAATCTATTGTTGCAGCTGATTTAGTTCCTTCCTCGTCTCTTCAGCCGCAGCCTCTCTCTGTGTCCTCGAATCGCCACCATAACAGCCAGCTTCCTGAATCCAGGTTAAGAACAGATGCGGAAGTAAAAGATCCAATAGCAGTGAGAAAAATTCAGAAGGCAGATCGTGAAAAATTGAGGAGAGACAGACTGAATGAACACTTTCTTGAGCTAGGAAACACATTAGATCCAGATAGGCCCAAAAATGACAAGGCTACCATCCTTACAGACACCATCCAGATGCTGAAGGATTTAACTGCCGAAGTCAATAGATTGAAGGCTGACTATGAAGCTCTTTCTGAAGAATCACGTGAGCTAACTCAGGAAAAGAATGAGCTTAGAGAAGAGAAGGCTTCACTAAAATCAGATATTGAAAATCTAAATGCCCAGTATCAACAAAGACTGAGAGTCATGTTTCCCTGGGCTACAATGGATCCTTCAGTGGTTATGGGGCCCCCATATTCATACCCCGTTCCCGTTCCCGTTCCCCCAGGACCAATTCCCATGCATCCGTCATTGCAGCCCTTCACCTTCTTTGGCAATCAGAATCCTGGTGCTATTCCTAACCCCTGTTCGACGTTTGTCCCATATACTGCTGCTGCCAATCATCCGGTTGAACAGCCCTCTGCCCAATATGCGTCCAATTCACATGTCTCCAGCAAACAAGATTCCAGAAGTAAGTCATCAGATCAGCAAAGGCGTAGTAATGCAGAAAGATGCGACGAATCTAATGATGTAGCAACAGACCTTGAACTTAAGATGCCTGGATCTTCAACGCAACAGGATGCATCCTCTGGAAGTAAGAAAGGTAAGCAGTCACAGAGGAAAGAAAAAAGTGTCACCGATTGTAGTTCTTCGAGTAGGTTTTCTTCATCCCCAGTTCTTCAAGATAGCTCCTCTAACAGTGTTAGCGACATCCCGAAACAGAACAACTGAATTCAAGGTTACTAACCTCATCAAAGTGATTAGATTCAAGGTGGTTTCTTCCTTCACCAACCAAATATTGAGTTCAGAATTTCTGTTTCAGAGCTCTAGCTCTAGCTCGCACATCAAAATGAGTGGCATTCCTCCTTCAGTAATTACATGCCCAAACTAGGGCTATCGATCATGAGGTGCGAGATATTGCGACTGTTAACGACGTCTAATTTAACGAGGCTTACCGTATATTTAAGTAATATTGTTATAGGCTGACATTGACAGCATTTGTCCAGTAGAGACCCTGCATTTAGGGAGTGGTTCAGTGGAATATCTGCTTGTAAATTATGGCAAGACTCTATGCAGAGGCCATTCATGTTGAAAACCATTTAGTTAGTTCTTGTAATGGTCAAATCCAAAAAGCCTTCTCAAGTGAAGCTGGAAAATTTAACTCCTGAATAAGTCGTCAATCAATGAGCAAGGAATTGTAACAACATAAATCATCTATGTTTCCAATCACCACTTATAAATTTATTGTCACTAATAGTTCATATTTGTGATTGAAGTACTAGGGTGTTTGGCTCATGCTTAGTCAAAGAAGTTGAATTTATACCCTTTTTTTTTTTTTGACAATATATGGGGTGGGGGATTC ATGGAGCAGTGGAAGACTGGTGATTTCTCTCAATCTATTGTTGCAGCTGATTTAGTTCCTTCCTCGTCTCTTCAGCCGCAGCCTCTCTCTGTGTCCTCGAATCGCCACCATAACAGCCAGCTTCCTGAATCCAGGTTAAGAACAGATGCGGAAGTAAAAGATCCAATAGCAGTGAGAAAAATTCAGAAGGCAGATCGTGAAAAATTGAGGAGAGACAGACTGAATGAACACTTTCTTGAGCTAGGAAACACATTAGATCCAGATAGGCCCAAAAATGACAAGGCTACCATCCTTACAGACACCATCCAGATGCTGAAGGATTTAACTGCCGAAGTCAATAGATTGAAGGCTGACTATGAAGCTCTTTCTGAAGAATCACGTGAGCTAACTCAGGAAAAGAATGAGCTTAGAGAAGAGAAGGCTTCACTAAAATCAGATATTGAAAATCTAAATGCCCAGTATCAACAAAGACTGAGAGTCATGTTTCCCTGGGCTACAATGGATCCTTCAGTGGTTATGGGGCCCCCATATTCATACCCCGTTCCCGTTCCCGTTCCCCCAGGACCAATTCCCATGCATCCGTCATTGCAGCCCTTCACCTTCTTTGGCAATCAGAATCCTGGTGCTATTCCTAACCCCTGTTCGACGTTTGTCCCATATACTGCTGCTGCCAATCATCCGGTTGAACAGCCCTCTGCCCAATATGCGTCCAATTCACATGTCTCCAGCAAACAAGATTCCAGAAGTAAGTCATCAGATCAGCAAAGGCGTAGTAATGCAGAAAGATGCGACGAATCTAATGATGTAGCAACAGACCTTGAACTTAAGATGCCTGGATCTTCAACGCAACAGGATGCATCCTCTGGAAGTAAGAAAGGTAAGCAGTCACAGAGGAAAGAAAAAAGTGTCACCGATTGTAGTTCTTCGAGTAGGTTTTCTTCATCCCCAGTTCTTCAAGATAGCTCCTCTAACAGTGTTAGCGACATCCCGAAACAGAACAACTGA MEQWKTGDFSQSIVAADLVPSSSLQPQPLSVSSNRHHNSQLPESRLRTDAEVKDPIAVRKIQKADREKLRRDRLNEHFLELGNTLDPDRPKNDKATILTDTIQMLKDLTAEVNRLKADYEALSEESRELTQEKNELREEKASLKSDIENLNAQYQQRLRVMFPWATMDPSVVMGPPYSYPVPVPVPPGPIPMHPSLQPFTFFGNQNPGAIPNPCSTFVPYTAAANHPVEQPSAQYASNSHVSSKQDSRSKSSDQQRRSNAERCDESNDVATDLELKMPGSSTQQDASSGSKKGKQSQRKEKSVTDCSSSSRFSSSPVLQDSSSNSVSDIPKQNN Homology
BLAST of Lcy04g018400 vs. ExPASy Swiss-Prot
Match: Q9LT23 (Transcription factor bHLH121 OS=Arabidopsis thaliana OX=3702 GN=BHLH121 PE=1 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 6.7e-70 Identity = 165/294 (56.12%), Postives = 212/294 (72.11%), Query Frame = 0
BLAST of Lcy04g018400 vs. ExPASy Swiss-Prot
Match: Q8W2F2 (Transcription factor bHLH11 OS=Arabidopsis thaliana OX=3702 GN=BHLH11 PE=2 SV=2) HSP 1 Score: 173.7 bits (439), Expect = 3.5e-42 Identity = 130/277 (46.93%), Postives = 167/277 (60.29%), Query Frame = 0
BLAST of Lcy04g018400 vs. ExPASy Swiss-Prot
Match: Q10KL8 (Protein IRON-RELATED TRANSCRIPTION FACTOR 3 OS=Oryza sativa subsp. japonica OX=39947 GN=IRO3 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 3.0e-17 Identity = 67/176 (38.07%), Postives = 97/176 (55.11%), Query Frame = 0
BLAST of Lcy04g018400 vs. ExPASy Swiss-Prot
Match: Q9FH37 (Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 8.9e-14 Identity = 63/161 (39.13%), Postives = 85/161 (52.80%), Query Frame = 0
BLAST of Lcy04g018400 vs. ExPASy Swiss-Prot
Match: Q69V10 (Transcription factor BHLH062 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH062 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 9.9e-13 Identity = 61/196 (31.12%), Postives = 103/196 (52.55%), Query Frame = 0
BLAST of Lcy04g018400 vs. ExPASy TrEMBL
Match: A0A6J1KQP0 (transcription factor bHLH121 OS=Cucurbita maxima OX=3661 GN=LOC111497384 PE=4 SV=1) HSP 1 Score: 595.1 bits (1533), Expect = 1.8e-166 Identity = 316/334 (94.61%), Postives = 324/334 (97.01%), Query Frame = 0
BLAST of Lcy04g018400 vs. ExPASy TrEMBL
Match: A0A6J1EEJ9 (transcription factor bHLH121 OS=Cucurbita moschata OX=3662 GN=LOC111433620 PE=4 SV=1) HSP 1 Score: 595.1 bits (1533), Expect = 1.8e-166 Identity = 316/334 (94.61%), Postives = 324/334 (97.01%), Query Frame = 0
BLAST of Lcy04g018400 vs. ExPASy TrEMBL
Match: A0A5A7SMK4 (Transcription factor bHLH121 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001290 PE=4 SV=1) HSP 1 Score: 592.0 bits (1525), Expect = 1.5e-165 Identity = 316/334 (94.61%), Postives = 324/334 (97.01%), Query Frame = 0
BLAST of Lcy04g018400 vs. ExPASy TrEMBL
Match: A0A1S3B2M7 (transcription factor bHLH121 OS=Cucumis melo OX=3656 GN=LOC103485127 PE=4 SV=1) HSP 1 Score: 592.0 bits (1525), Expect = 1.5e-165 Identity = 316/334 (94.61%), Postives = 324/334 (97.01%), Query Frame = 0
BLAST of Lcy04g018400 vs. ExPASy TrEMBL
Match: A0A0A0KGN6 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G505920 PE=4 SV=1) HSP 1 Score: 584.7 bits (1506), Expect = 2.4e-163 Identity = 315/336 (93.75%), Postives = 323/336 (96.13%), Query Frame = 0
BLAST of Lcy04g018400 vs. NCBI nr
Match: XP_038881294.1 (transcription factor bHLH121 [Benincasa hispida]) HSP 1 Score: 597.0 bits (1538), Expect = 9.7e-167 Identity = 317/334 (94.91%), Postives = 325/334 (97.31%), Query Frame = 0
BLAST of Lcy04g018400 vs. NCBI nr
Match: XP_022926487.1 (transcription factor bHLH121 [Cucurbita moschata] >XP_023003941.1 transcription factor bHLH121 [Cucurbita maxima]) HSP 1 Score: 595.1 bits (1533), Expect = 3.7e-166 Identity = 316/334 (94.61%), Postives = 324/334 (97.01%), Query Frame = 0
BLAST of Lcy04g018400 vs. NCBI nr
Match: XP_023517624.1 (transcription factor bHLH121 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 592.4 bits (1526), Expect = 2.4e-165 Identity = 316/334 (94.61%), Postives = 323/334 (96.71%), Query Frame = 0
BLAST of Lcy04g018400 vs. NCBI nr
Match: XP_008440819.1 (PREDICTED: transcription factor bHLH121 [Cucumis melo] >KAA0025675.1 transcription factor bHLH121 [Cucumis melo var. makuwa] >TYK12547.1 transcription factor bHLH121 [Cucumis melo var. makuwa]) HSP 1 Score: 592.0 bits (1525), Expect = 3.1e-165 Identity = 316/334 (94.61%), Postives = 324/334 (97.01%), Query Frame = 0
BLAST of Lcy04g018400 vs. NCBI nr
Match: KAG6594774.1 (Transcription factor basic helix-loop-helix 121, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 590.5 bits (1521), Expect = 9.1e-165 Identity = 315/334 (94.31%), Postives = 323/334 (96.71%), Query Frame = 0
BLAST of Lcy04g018400 vs. TAIR 10
Match: AT3G19860.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 265.8 bits (678), Expect = 4.8e-71 Identity = 165/294 (56.12%), Postives = 212/294 (72.11%), Query Frame = 0
BLAST of Lcy04g018400 vs. TAIR 10
Match: AT3G19860.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 264.6 bits (675), Expect = 1.1e-70 Identity = 159/275 (57.82%), Postives = 205/275 (74.55%), Query Frame = 0
BLAST of Lcy04g018400 vs. TAIR 10
Match: AT4G36060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 173.7 bits (439), Expect = 2.5e-43 Identity = 130/277 (46.93%), Postives = 167/277 (60.29%), Query Frame = 0
BLAST of Lcy04g018400 vs. TAIR 10
Match: AT4G36060.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 173.7 bits (439), Expect = 2.5e-43 Identity = 130/277 (46.93%), Postives = 167/277 (60.29%), Query Frame = 0
BLAST of Lcy04g018400 vs. TAIR 10
Match: AT5G54680.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 79.3 bits (194), Expect = 6.3e-15 Identity = 63/161 (39.13%), Postives = 85/161 (52.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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