Lcy04g018310 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g018310
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Zinc finger protein
Location	Chr04: 50195539 .. 50199045 (+)
RNA-Seq Expression	Lcy04g018310
Synteny	Lcy04g018310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAGGCCAGCGAAGTTGAAGCCCACGAAGGCCACCACAAAAACGGTGGCAAGGCAGCCCACACGGAAGAAGAAGACGACGACGAAGAAGAAAACGCCCCTGGTGTGTGCTGGAGGCGGAAAATTTCGCCTACCCCTCTCCTCTTCGAGCACACTGGTTGTTCTTTGACCATCAGTTGAGCTAAGTATATCGAGCAATGGATGGAGTGAAGGAGGGGATAGAAGGAAAAACAGTGTCACAAGTAGCAATGGGCGAAGGAAAAGAAGGCGATTGGGAGTGCAGCGGATGCAAGAACAGGAACTATGCTTTCCGATCGTTCTGTAACAGATGCAAACAACCTCGCCTTCTCGTCGACAATAAAACCCCTCCAGACTCCAAATGGCTTCCTCGCATCGGCGACTGGATCTGCACGGGTTAGCTTCTTATAATAACTGTAGCTGTTGTTCTTCATTTTCCTTTATGCAACCTGCAATGATTTCGCCTTGTTGGATTTGCTCGCTCACATTAGAATTCAACGTTTCATTAGAATCTTAGGAGCTTCTGGGACTGTTCTCTTTTAAACACCTGACTAGGAGGAAAGTTATCGAGTTAGATTTATAGCGGGGTTACTCGGTTGAGGTCTCATGCTTAGAAATTATAGTTTTCCAGCTAATTGGAATGAGCTGATAATTCTTGAAATTTTCCAATTTAGCTCCATCAAACTTCTTCAAGATCATATTGAGTTATCCATTTAGAAAATTTTACGAGAGACAGGAACTTACATCTATGTACGAACAATTCTCTCTGTCGTTGTTGTTGGTTTTGTTGTTGTTATTATTATTATTATTATTTTGGGGGGGGGGGGGGGGCATGGAAGTTTTCAGTAGATACTATTCGAGATAACTTGGGGGCAAGCTATTAGACTTCCCATGCAATAAAATGACTCATCACAGCCAATTCAGAAATTGTAGTTAGACTTGATATATTTTCCAAACCCATGTGTTATGTCATAAGAGCATATACTGCTTAGTAAATCGTAGGAATCTCCATTGCATCTTTATCACTAGTTCAAGATTTTCTCTGAGGATTGTTTTTCTTCCTGCCCTCTTCATTAATGTTTCTATTCCAGCGAACTCGTGCTTTTAGGAAAATGCTAAATTAGGTTGAGTCATGAGTCGTTTGTGTTTTTTGTATGTGTATTTGGTGTGGATGGACTGCTTGGTGTGCGTATACCTGGCTTGCTTGTGGGTTGGGTTTGTCTGGCTCTGGTGCAATAGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAAAAGTGTGGACAACCAAAGGAGATAGCAGCAATGCCAGCAATTGCAATCCCTGGAGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAAGGAGGATTGGATACAAAGATGAATCTTGGATTAATAGGAAATGGCACTTCACAGCAACTGCATCCTCTGAGCTCCAATTGGTCCCTGGGAGGTGCTGATAAGTATGGAATTCATGCAGCTCCAACATTTCCTTTGGGTGGAAATAATTCTGCCATCTCGTATATGAGTTCTCCTAATCAGATCCTTTCAGTTCCGAAGGGTTGGCGGAGTGGTGACTGGATATGCAACTGTGGTTTCCATAATTACTCTTCACGTGCGCAGGTGGGATTTCCACCTTCTCATACTGAGTCGTTTTCTTTCTTTTCCTATGGGTGCTTTTAATTTCCCATTTTTGTTTACACCTGTTGTTTATATAACTAAACTTTGTCTTACTTGCAGTGCAAAAAATGCAATGCTTCACCACAAGGTACATGCACCTCTTTCTCTCTGGGTTTTAAATGGTCGCACTAGGACTATGATATAGCTATTTTATAGTTTCTGTATGTAATAACAAAGGAGTTATGGACCTATGGTGTCCTGCACACAAAAATCTTTCTATTGTTTCATTTATCCTATTTATCTTCTTTGTTGTTGGTTGAATGAATAGATTCATATTTTGGAATTTGGAGTAGTAATGTTTGATAGAAGGAAATTTTAGTAGAATGGAGAAACTTAGTTCCCTAGGGGTGGCTGTACTGGTATTTTTGAAGGTGAAAGGTATTTCAGCTGAGATAAAGAAGTCAATAGAGATAAGAGTTGATTAGAGTTATCAATTATATTTCTGTGTGAAGTTGAGCACCTCCTGGGGGATTCGACTCACCTTTCTCTCTCTCTCTCTCTCTCACGCTCTCTCTCTCTCTCTCTTTGGATTTTGCAGCACTTGGAATGAAACGCTTAGCATCCGAAGAACTTGTTCATCACTGGGATAACAAGAGATTAAATATTGGACAGGTATTCACCATGCACAGAAAAAAATGACGATAAAAATTTGATATTAAGGAAATATATGCTGTTAAAATTTGGTGAAACTAATAACTGGCTTGTTGTTCTTTTCTTGTCATTCAGACAAATGAGCAACAACAATCTTACCCAGGTTTTGAGCAGATGATAGGTTCCAGTAGTGACCCAAATGTGGGACTATATAATTCTTATACCCACGAAAGTTCTGGTGTAGCTCCAAATTTGGAAATGCAAATGCAGTTTCCCCAACAAGCAACTGCACCAACGCTCCTAGGGAAAGGGTATATGTAGTTGCATTAACTAGCTGTATTTCATTTTCTCTGACCCTTCTAATTAAACCCTTTTCTTCTTGGCCACACTGCTAATAAGGCTGTGATGTCATGAATCCTCATTTATAATGTTTGATTGATATCGCCCAAAATTTTAATAGCATGGAACAACTAGGATTTTAGTTAACTATGAACTCTTTACTGATTGAGATAAAACATCCTTACCTTATTGAATCTACAGAGCAAAGCAGTGGCGCAACGGAGATTGGATGTGCACAAATTGCAATAATCATAATTATGCATCTCGCTTACAATGTAACAGGTTATCATCTAAACTAGTTTTTTTCTTCACATTCATGTTGAATGCACATGTGTACGTGCCGTATGTACTATGCATTGATCTTTTGACCTTTGAATCTTATAATTCAATTACTCCACAAGTTCTTATTGATCCTGTCAGGAGAATGGTTGGATCCTATGTTCTTCTGGTTGTTAATTTAGTAGGTTTCTTCCATCTTAAATGGAATTTGGTAGCTCACATTGCATTGCACATCCAATATTTAAATGTTCTTTTGTAACAGGTGCAAGACTCAAAGAGATTCACTTTCTCTGCCACTCAGTGCCATCTGAGCAGATTTATACAGACTTCGGATGGCTGTTATTCTCTTGCCGCAATGTTCTTTCATAGAGGGAAAAAAAAAATTCATTTAGCGGCAATAATGCCTCAACTTTTTGGTTGTCTTAATCGACTCTCCTAGTCTCCAATATGTTGATTGATTATGAGTTTTTCATTACTTAGGAAAGCAAGTTTGGCTGTGAATGACATTACTGTTTTTGCTGAACAGTTGAGAATTTTAGTGTCGAATCATTATATAGATAAAGATATATATTTTCAGTTTTGCATC

mRNA sequence

TAAAAGGCCAGCGAAGTTGAAGCCCACGAAGGCCACCACAAAAACGGTGGCAAGGCAGCCCACACGGAAGAAGAAGACGACGACGAAGAAGAAAACGCCCCTGGTGTGTGCTGGAGGCGGAAAATTTCGCCTACCCCTCTCCTCTTCGAGCACACTGGTTGTTCTTTGACCATCAGTTGAGCTAAGTATATCGAGCAATGGATGGAGTGAAGGAGGGGATAGAAGGAAAAACAGTGTCACAAGTAGCAATGGGCGAAGGAAAAGAAGGCGATTGGGAGTGCAGCGGATGCAAGAACAGGAACTATGCTTTCCGATCGTTCTGTAACAGATGCAAACAACCTCGCCTTCTCGTCGACAATAAAACCCCTCCAGACTCCAAATGGCTTCCTCGCATCGGCGACTGGATCTGCACGGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAAAAGTGTGGACAACCAAAGGAGATAGCAGCAATGCCAGCAATTGCAATCCCTGGAGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAAGGAGGATTGGATACAAAGATGAATCTTGGATTAATAGGAAATGGCACTTCACAGCAACTGCATCCTCTGAGCTCCAATTGGTCCCTGGGAGGTGCTGATAAGTATGGAATTCATGCAGCTCCAACATTTCCTTTGGGTGGAAATAATTCTGCCATCTCGTATATGAGTTCTCCTAATCAGATCCTTTCAGTTCCGAAGGGTTGGCGGAGTGGTGACTGGATATGCAACTGTGGTTTCCATAATTACTCTTCACGTGCGCAGTGCAAAAAATGCAATGCTTCACCACAAGCACTTGGAATGAAACGCTTAGCATCCGAAGAACTTGTTCATCACTGGGATAACAAGAGATTAAATATTGGACAGACAAATGAGCAACAACAATCTTACCCAGGTTTTGAGCAGATGATAGGTTCCAGTAGTGACCCAAATGTGGGACTATATAATTCTTATACCCACGAAAGTTCTGGTGTAGCTCCAAATTTGGAAATGCAAATGCAGTTTCCCCAACAAGCAACTGCACCAACGCTCCTAGGGAAAGGAGCAAAGCAGTGGCGCAACGGAGATTGGATGTGCACAAATTGCAATAATCATAATTATGCATCTCGCTTACAATGTAACAGGTGCAAGACTCAAAGAGATTCACTTTCTCTGCCACTCAGTGCCATCTGAGCAGATTTATACAGACTTCGGATGGCTGTTATTCTCTTGCCGCAATGTTCTTTCATAGAGGGAAAAAAAAAATTCATTTAGCGGCAATAATGCCTCAACTTTTTGGTTGTCTTAATCGACTCTCCTAGTCTCCAATATGTTGATTGATTATGAGTTTTTCATTACTTAGGAAAGCAAGTTTGGCTGTGAATGACATTACTGTTTTTGCTGAACAGTTGAGAATTTTAGTGTCGAATCATTATATAGATAAAGATATATATTTTCAGTTTTGCATC

Coding sequence (CDS)

ATGGATGGAGTGAAGGAGGGGATAGAAGGAAAAACAGTGTCACAAGTAGCAATGGGCGAAGGAAAAGAAGGCGATTGGGAGTGCAGCGGATGCAAGAACAGGAACTATGCTTTCCGATCGTTCTGTAACAGATGCAAACAACCTCGCCTTCTCGTCGACAATAAAACCCCTCCAGACTCCAAATGGCTTCCTCGCATCGGCGACTGGATCTGCACGGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAAAAGTGTGGACAACCAAAGGAGATAGCAGCAATGCCAGCAATTGCAATCCCTGGAGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAAGGAGGATTGGATACAAAGATGAATCTTGGATTAATAGGAAATGGCACTTCACAGCAACTGCATCCTCTGAGCTCCAATTGGTCCCTGGGAGGTGCTGATAAGTATGGAATTCATGCAGCTCCAACATTTCCTTTGGGTGGAAATAATTCTGCCATCTCGTATATGAGTTCTCCTAATCAGATCCTTTCAGTTCCGAAGGGTTGGCGGAGTGGTGACTGGATATGCAACTGTGGTTTCCATAATTACTCTTCACGTGCGCAGTGCAAAAAATGCAATGCTTCACCACAAGCACTTGGAATGAAACGCTTAGCATCCGAAGAACTTGTTCATCACTGGGATAACAAGAGATTAAATATTGGACAGACAAATGAGCAACAACAATCTTACCCAGGTTTTGAGCAGATGATAGGTTCCAGTAGTGACCCAAATGTGGGACTATATAATTCTTATACCCACGAAAGTTCTGGTGTAGCTCCAAATTTGGAAATGCAAATGCAGTTTCCCCAACAAGCAACTGCACCAACGCTCCTAGGGAAAGGAGCAAAGCAGTGGCGCAACGGAGATTGGATGTGCACAAATTGCAATAATCATAATTATGCATCTCGCTTACAATGTAACAGGTGCAAGACTCAAAGAGATTCACTTTCTCTGCCACTCAGTGCCATCTGA

Protein sequence

MDGVKEGIEGKTVSQVAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDSKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGGLDTKMNLGLIGNGTSQQLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSSPNQILSVPKGWRSGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQTNEQQQSYPGFEQMIGSSSDPNVGLYNSYTHESSGVAPNLEMQMQFPQQATAPTLLGKGAKQWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI

Homology

[Close]

BLAST of Lcy04g018310 vs. ExPASy Swiss-Prot
Match: O13801 (Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.04c PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.8e-07
Identity = 40/152 (26.32%), Postives = 64/152 (42.11%), Query Frame = 0


Query: 65  RIGDWIC--TGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSH-YFARTQGGL 124
           R GDW C   GC  +N+A    C +CG  +  AA+ A    G    +YSH  ++     +
Sbjct: 445 RAGDWKCGSEGCGYHNFAKNVCCLRCGASRATAAVVADHASGPVNGSYSHNSYSHIPPVM 504

Query: 125 DTKMNLGLIGNGTSQQLHPLSSN--WSLGGADKYGIHAAPTFPLGGNNSAISYMSSPNQI 184
            T      +   +   ++ +++N   + GG +            GGN S         ++
Sbjct: 505 STSPPNHSVYPYSQLSINSVTANHGQNFGGQN------------GGNVSRFDDHGRFKEV 564

Query: 185 LSVPKGWRSGDWICNCGFHNYSSRAQCKKCNA 212
                    GDW+C CGF N+  R+ C +CNA
Sbjct: 565 SRPSVTTDQGDWLCECGFTNFRRRSNCLRCNA 584

[Close]

BLAST of Lcy04g018310 vs. ExPASy Swiss-Prot
Match: O95218 (Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ZRANB2 PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 7.0e-06
Identity = 27/83 (32.53%), Postives = 37/83 (44.58%), Query Frame = 0


Query: 23 EGDWEC--SGCKNRNYAFRSFCNRCKQPRLL-----------VDNKTPPDSKWLPRIGDW 82
          +GDW C    C N N+A R+ CNRC + +             +       S+ L    DW
Sbjct: 10 DGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDW 69

Query: 83 ICTGCTNNNYASREKCKKCGQPK 93
           C  C+N N+A R +C  C  PK
Sbjct: 70 QCKTCSNVNWARRSECNMCNTPK 92

[Close]

BLAST of Lcy04g018310 vs. ExPASy Swiss-Prot
Match: Q9R020 (Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 7.0e-06
Identity = 27/83 (32.53%), Postives = 37/83 (44.58%), Query Frame = 0


Query: 23 EGDWEC--SGCKNRNYAFRSFCNRCKQPRLL-----------VDNKTPPDSKWLPRIGDW 82
          +GDW C    C N N+A R+ CNRC + +             +       S+ L    DW
Sbjct: 10 DGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDW 69

Query: 83 ICTGCTNNNYASREKCKKCGQPK 93
           C  C+N N+A R +C  C  PK
Sbjct: 70 QCKTCSNVNWARRSECNMCNTPK 92

[Close]

BLAST of Lcy04g018310 vs. ExPASy Swiss-Prot
Match: Q19QU3 (Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.0e-06
Identity = 27/83 (32.53%), Postives = 37/83 (44.58%), Query Frame = 0


Query: 23 EGDWEC--SGCKNRNYAFRSFCNRCKQPRLL-----------VDNKTPPDSKWLPRIGDW 82
          +GDW C    C N N+A R+ CNRC + +             +       S+ L    DW
Sbjct: 10 DGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDW 69

Query: 83 ICTGCTNNNYASREKCKKCGQPK 93
           C  C+N N+A R +C  C  PK
Sbjct: 70 QCKTCSNVNWARRSECNMCNTPK 92

[Close]

BLAST of Lcy04g018310 vs. ExPASy Swiss-Prot
Match: Q5R580 (Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii OX=9601 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.0e-06
Identity = 27/83 (32.53%), Postives = 37/83 (44.58%), Query Frame = 0


Query: 23 EGDWEC--SGCKNRNYAFRSFCNRCKQPRLL-----------VDNKTPPDSKWLPRIGDW 82
          +GDW C    C N N+A R+ CNRC + +             +       S+ L    DW
Sbjct: 10 DGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDW 69

Query: 83 ICTGCTNNNYASREKCKKCGQPK 93
           C  C+N N+A R +C  C  PK
Sbjct: 70 QCKTCSNVNWARRSECNMCNTPK 92

[Close]

BLAST of Lcy04g018310 vs. ExPASy TrEMBL
Match: A0A0A0KGM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505830 PE=4 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 1.1e-192
Identity = 315/340 (92.65%), Postives = 324/340 (95.29%), Query Frame = 0


Query: 1   MDGVKEGIEGKTVSQVAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDG KEGIEGK   Q+AMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPA+AIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LDTKMNLGLIGNGTSQQLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSSPNQIL 180
           LD+KMNLGLIGNGTSQ LHPLSSNWSLGGADKYGIHAAPTFPL GNNSAISYMS  NQ+L
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRSGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQT 240
           SVPKGWR+GDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WDNKRLNIGQ 
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMIGSSSDPNVGLYNSYTHESSGVAPNLEMQMQFPQQATAPTLLGKGAK 300
           NEQQQSYPGFEQM+G+ SDPNVGLYNSY HESS VAPNLEM MQFP QATAPTLLGKGAK
Sbjct: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRL CNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Lcy04g018310 vs. ExPASy TrEMBL
Match: A0A1S3B1J3 (uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC103485118 PE=4 SV=1)

HSP 1 Score: 681.8 bits (1758), Expect = 1.5e-192
Identity = 314/340 (92.35%), Postives = 325/340 (95.59%), Query Frame = 0


Query: 1   MDGVKEGIEGKTVSQVAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDG KEGIEGK  SQ+AMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASSQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPA+AIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LDTKMNLGLIGNGTSQQLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSSPNQIL 180
           LD+KMNLGLIGNGTSQ LHPLSSNWS+GGADKYGIHAAPTFPLGGNNSAISYMS  NQ+L
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSMGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRSGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQT 240
           SVPKGWR+GDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WDNKRLNIGQ 
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMIGSSSDPNVGLYNSYTHESSGVAPNLEMQMQFPQQATAPTLLGKGAK 300
           NEQQQSYPG EQM+G+SSDPNVGLYN Y HESS VAPNLEM +QFP QATAPTLLGKGAK
Sbjct: 241 NEQQQSYPGLEQMMGTSSDPNVGLYNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRL CNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Lcy04g018310 vs. ExPASy TrEMBL
Match: A0A6J1EFP4 (uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita moschata OX=3662 GN=LOC111433894 PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 2.4e-190
Identity = 321/342 (93.86%), Postives = 326/342 (95.32%), Query Frame = 0


Query: 1   MDGVKEGIEGKTVSQVA-MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDGVKEGIE K  SQVA MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAI GASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120

Query: 121 GLDTKMNLGLIGNGTSQQLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSSPNQI 180
           GLDTKMNLGL  NG  QQLHPLSSNWSLGGADKY IHA+P FPLGGNNSAISYMSSPNQI
Sbjct: 121 GLDTKMNLGL-RNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQI 180

Query: 181 LSVPKGWRSGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQ 240
           LSVPKGWR+GDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WDNKRLNIGQ
Sbjct: 181 LSVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240

Query: 241 TNEQQQSYPGFEQMIGSSSDPNVG-LYNSYTHESSGVAPNLEMQMQFPQQATAPTLLGKG 300
           TNEQQQS+PGFEQM+GSSSDPNVG LYNSY HESSG+APNLEM MQFPQQATAPTLLGKG
Sbjct: 241 TNEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKG 300

Query: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           AKQWRNGDWMCTNCNNHNYASRLQCNRCKT RDSLSLPLSAI
Sbjct: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341

[Close]

BLAST of Lcy04g018310 vs. ExPASy TrEMBL
Match: A0A6J1BXT0 (uncharacterized RNA-binding protein C17H9.04c OS=Momordica charantia OX=3673 GN=LOC111005702 PE=4 SV=1)

HSP 1 Score: 673.3 bits (1736), Expect = 5.3e-190
Identity = 314/340 (92.35%), Postives = 323/340 (95.00%), Query Frame = 0


Query: 1   MDGVKEGIEGKTVSQVAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDG KEG+E K   QVAM EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPAIAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG 120

Query: 121 LDTKMNLGLIGNGTSQQLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSSPNQIL 180
           L+TKMNLGLIGNGTSQQ HPLSSNW LGG DKYGIHAA TFPLGGNNSAISYMSS NQIL
Sbjct: 121 LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL 180

Query: 181 SVPKGWRSGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQT 240
            VPKGWR+GDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WD+KRLNIGQT
Sbjct: 181 LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT 240

Query: 241 NEQQQSYPGFEQMIGSSSDPNVGLYNSYTHESSGVAPNLEMQMQFPQQATAPTLLGKGAK 300
           NEQQQSYPGFEQ++ SSSD NVGLYNSY+HESSGVAPNLEM M FPQQ+TAPTLLGKGAK
Sbjct: 241 NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Lcy04g018310 vs. ExPASy TrEMBL
Match: A0A6J1KT42 (uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita maxima OX=3661 GN=LOC111497358 PE=4 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 2.6e-189
Identity = 320/342 (93.57%), Postives = 325/342 (95.03%), Query Frame = 0


Query: 1   MDGVKEGIEGKTVSQVA-MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDGVKEGIE K  SQVA MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAI GASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120

Query: 121 GLDTKMNLGLIGNGTSQQLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSSPNQI 180
           GLDTKMNLGL  NG  QQLHPLSSNWSLGGADKY IHAAP FPLGGNNSAISYMSSPNQI
Sbjct: 121 GLDTKMNLGL-RNGPLQQLHPLSSNWSLGGADKYEIHAAPAFPLGGNNSAISYMSSPNQI 180

Query: 181 LSVPKGWRSGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQ 240
           LSVPKGWR+GDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WDNKRLNIGQ
Sbjct: 181 LSVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240

Query: 241 TNEQQQSYPGFEQMIGSSSDPNVG-LYNSYTHESSGVAPNLEMQMQFPQQATAPTLLGKG 300
           TNEQQ S+PGFEQM+GSSSDPNVG LYNSY HESSG+AP+LEM MQFPQQATAPTLLGKG
Sbjct: 241 TNEQQLSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPSLEMPMQFPQQATAPTLLGKG 300

Query: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           AKQWRNGDWMCTNCNNHNYASRLQCNRCKT RDSLSLPLSAI
Sbjct: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341

[Close]

BLAST of Lcy04g018310 vs. NCBI nr
Match: XP_038883349.1 (uncharacterized RNA-binding protein C17H9.04c [Benincasa hispida])

HSP 1 Score: 690.3 bits (1780), Expect = 8.6e-195
Identity = 320/340 (94.12%), Postives = 326/340 (95.88%), Query Frame = 0


Query: 1   MDGVKEGIEGKTVSQVAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDG KEGIEGK  SQ  MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKAASQQTMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGG 120

Query: 121 LDTKMNLGLIGNGTSQQLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSSPNQIL 180
           LD+K+NLGLIGNGTSQ LHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMS  NQ+L
Sbjct: 121 LDSKINLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRSGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQT 240
           SVPKGWR+GDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQ 
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMIGSSSDPNVGLYNSYTHESSGVAPNLEMQMQFPQQATAPTLLGKGAK 300
           NEQQQSYPGFEQM+GSSSDPNVGLYNSY HESS VAPNLEM MQFP QATAP LLGKGAK
Sbjct: 241 NEQQQSYPGFEQMMGSSSDPNVGLYNSYPHESSNVAPNLEMPMQFPPQATAPALLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Lcy04g018310 vs. NCBI nr
Match: XP_004134868.1 (uncharacterized RNA-binding protein C17H9.04c [Cucumis sativus] >KGN48905.1 hypothetical protein Csa_003493 [Cucumis sativus])

HSP 1 Score: 682.2 bits (1759), Expect = 2.3e-192
Identity = 315/340 (92.65%), Postives = 324/340 (95.29%), Query Frame = 0


Query: 1   MDGVKEGIEGKTVSQVAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDG KEGIEGK   Q+AMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPA+AIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LDTKMNLGLIGNGTSQQLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSSPNQIL 180
           LD+KMNLGLIGNGTSQ LHPLSSNWSLGGADKYGIHAAPTFPL GNNSAISYMS  NQ+L
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRSGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQT 240
           SVPKGWR+GDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WDNKRLNIGQ 
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMIGSSSDPNVGLYNSYTHESSGVAPNLEMQMQFPQQATAPTLLGKGAK 300
           NEQQQSYPGFEQM+G+ SDPNVGLYNSY HESS VAPNLEM MQFP QATAPTLLGKGAK
Sbjct: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRL CNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Lcy04g018310 vs. NCBI nr
Match: XP_008440810.1 (PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo])

HSP 1 Score: 681.8 bits (1758), Expect = 3.0e-192
Identity = 314/340 (92.35%), Postives = 325/340 (95.59%), Query Frame = 0


Query: 1   MDGVKEGIEGKTVSQVAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDG KEGIEGK  SQ+AMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASSQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPA+AIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LDTKMNLGLIGNGTSQQLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSSPNQIL 180
           LD+KMNLGLIGNGTSQ LHPLSSNWS+GGADKYGIHAAPTFPLGGNNSAISYMS  NQ+L
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSMGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRSGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQT 240
           SVPKGWR+GDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WDNKRLNIGQ 
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMIGSSSDPNVGLYNSYTHESSGVAPNLEMQMQFPQQATAPTLLGKGAK 300
           NEQQQSYPG EQM+G+SSDPNVGLYN Y HESS VAPNLEM +QFP QATAPTLLGKGAK
Sbjct: 241 NEQQQSYPGLEQMMGTSSDPNVGLYNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRL CNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Lcy04g018310 vs. NCBI nr
Match: XP_022926922.1 (uncharacterized RNA-binding protein C17H9.04c [Cucurbita moschata] >XP_023518720.1 uncharacterized RNA-binding protein C17H9.04c [Cucurbita pepo subsp. pepo] >KAG6594780.1 hypothetical protein SDJN03_11333, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 674.5 bits (1739), Expect = 4.9e-190
Identity = 321/342 (93.86%), Postives = 326/342 (95.32%), Query Frame = 0


Query: 1   MDGVKEGIEGKTVSQVA-MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDGVKEGIE K  SQVA MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAI GASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120

Query: 121 GLDTKMNLGLIGNGTSQQLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSSPNQI 180
           GLDTKMNLGL  NG  QQLHPLSSNWSLGGADKY IHA+P FPLGGNNSAISYMSSPNQI
Sbjct: 121 GLDTKMNLGL-RNGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQI 180

Query: 181 LSVPKGWRSGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQ 240
           LSVPKGWR+GDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WDNKRLNIGQ
Sbjct: 181 LSVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240

Query: 241 TNEQQQSYPGFEQMIGSSSDPNVG-LYNSYTHESSGVAPNLEMQMQFPQQATAPTLLGKG 300
           TNEQQQS+PGFEQM+GSSSDPNVG LYNSY HESSG+APNLEM MQFPQQATAPTLLGKG
Sbjct: 241 TNEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKG 300

Query: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           AKQWRNGDWMCTNCNNHNYASRLQCNRCKT RDSLSLPLSAI
Sbjct: 301 AKQWRNGDWMCTNCNNHNYASRLQCNRCKTPRDSLSLPLSAI 341

[Close]

BLAST of Lcy04g018310 vs. NCBI nr
Match: XP_022132998.1 (uncharacterized RNA-binding protein C17H9.04c [Momordica charantia])

HSP 1 Score: 673.3 bits (1736), Expect = 1.1e-189
Identity = 314/340 (92.35%), Postives = 323/340 (95.00%), Query Frame = 0


Query: 1   MDGVKEGIEGKTVSQVAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDG KEG+E K   QVAM EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPAIAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG 120

Query: 121 LDTKMNLGLIGNGTSQQLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSSPNQIL 180
           L+TKMNLGLIGNGTSQQ HPLSSNW LGG DKYGIHAA TFPLGGNNSAISYMSS NQIL
Sbjct: 121 LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL 180

Query: 181 SVPKGWRSGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQT 240
            VPKGWR+GDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WD+KRLNIGQT
Sbjct: 181 LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT 240

Query: 241 NEQQQSYPGFEQMIGSSSDPNVGLYNSYTHESSGVAPNLEMQMQFPQQATAPTLLGKGAK 300
           NEQQQSYPGFEQ++ SSSD NVGLYNSY+HESSGVAPNLEM M FPQQ+TAPTLLGKGAK
Sbjct: 241 NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 341
           QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLQCNRCKTQRDSLSLPLSAI 340

[Close]

BLAST of Lcy04g018310 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 350.9 bits (899), Expect = 1.1e-96
Identity = 175/317 (55.21%), Postives = 198/317 (62.46%), Query Frame = 0


Query: 18  MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDSKWLPRIGDWICTGCTNN 77
           MG+G+EGDWEC GC+NRNYAFRSFCNRCKQPRL++DN T P+SKWLPRIGDWICTGCTNN
Sbjct: 1   MGDGREGDWECLGCRNRNYAFRSFCNRCKQPRLIMDNNTSPNSKWLPRIGDWICTGCTNN 60

Query: 78  NYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGGLDTKMNLGLIGNGTSQQ 137
           NYASREKCKKCGQ KE+AA+ A+AIPGAS  T+ HYF R     D   +L    N T+Q 
Sbjct: 61  NYASREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTRGPESHDQPGSLLAFSNATNQ- 120

Query: 138 LHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSSPNQILSVPKGWRSGDWICNCGF 197
                                                      SV K WRSGDWIC CGF
Sbjct: 121 ------------------------------------------ASVHKEWRSGDWICRCGF 180

Query: 198 HNYSSRAQCKKCN-ASPQALGMKRLASEELVHHWDNKRLNIGQTNEQQQSYPGFEQMIGS 257
           HNYSSR QCKKCN  +P ALG KRLASE L H WD+KRLN G T+ Q QS          
Sbjct: 181 HNYSSRIQCKKCNEIAPLALGTKRLASEALAHEWDSKRLNQGYTSMQTQS---------- 240

Query: 258 SSDPNVGLYNSYTHESSGVAPNLEMQMQFPQQATAPTLLGKGAKQWRNGDWMCTNCNNHN 317
                  +Y S+   S G   N ++ + F QQ + P LLG G KQWR+GDWMCTNC NHN
Sbjct: 241 ------AIYASFPGMSLGRVSNWQLPLPFLQQHSTPALLGMGVKQWRDGDWMCTNCKNHN 258

Query: 318 YASRLQCNRCKTQRDSL 334
           YASR +CNRCKT RD L
Sbjct: 301 YASRAECNRCKTTRDIL 258

[Close]

BLAST of Lcy04g018310 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 3.5e-13
Identity = 65/222 (29.28%), Postives = 87/222 (39.19%), Query Frame = 0


Query: 22  KEGDWECSGCKNRNYAFRSFCNRCKQPR-------LLVDNKTPPDSKWL-------PRIG 81
           + GDW C  C + N+  R  C RC++PR       LL      P S           R G
Sbjct: 3   RPGDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPG 62

Query: 82  DWICT--GCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGGLDTKM 141
           DW C    C  +N+A+R  C KCG  K+  +  +               A T G +D  M
Sbjct: 63  DWYCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSA--------------AATTGFMD--M 122

Query: 142 NLGLIGNGTSQQLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSSPNQILSVPKG 201
           N+G           P    +  GG+   G         GG         SP         
Sbjct: 123 NVG-----------PRRGLFGFGGSSSGG---------GGTG------RSP--------- 167

Query: 202 WRSGDWIC---NCGFHNYSSRAQCKKCNASPQALGMKRLASE 225
           W+SGDWIC    C  HN++SR++C +CNA       K LA+E
Sbjct: 183 WKSGDWICPRSGCNEHNFASRSECFRCNAP------KELATE 167

[Close]

BLAST of Lcy04g018310 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 3.0e-12
Identity = 42/149 (28.19%), Postives = 61/149 (40.94%), Query Frame = 0


Query: 67  GDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGGLDTKMN 126
           GDW+C  C + N+  RE C+KCG PK           G    TY +       G      
Sbjct: 6   GDWLCGACQHANFKKRESCQKCGYPK---------FGGVDVSTYLYNRTEVMAG---DWY 65

Query: 127 LGLIGNGTSQQLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSSPNQILSVPKGW 186
            G +  G+    H  +S  S        +     +           ++  N   + P GW
Sbjct: 66  CGALNCGS----HNYASRTSCYRCGMIKVEYTEQY------YGAQMVAYGNDGAACPPGW 125

Query: 187 RSGDWIC---NCGFHNYSSRAQCKKCNAS 213
           ++GDW+C    CG HNY+SRA+C KC  +
Sbjct: 126 KTGDWVCPRVGCGVHNYASRAECFKCKTT 132

[Close]

BLAST of Lcy04g018310 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 59.3 bits (142), Expect = 6.9e-09
Identity = 28/78 (35.90%), Postives = 36/78 (46.15%), Query Frame = 0


Query: 11  KTVSQVAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDSKWLPRIGDWI 70
           K  S V + E K+GDW C+GC   N+A    C  C++ R           K L   GDW 
Sbjct: 365 KKTSMVNIVEMKKGDWNCTGCGYMNFASNKQCRECREQR----------HKTLAEPGDWE 424

Query: 71  CTGCTNNNYASREKCKKC 89
           C  C   N+   + CKKC
Sbjct: 425 CPSCDFVNFRRNDACKKC 432

[Close]

BLAST of Lcy04g018310 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 7.6e-08
Identity = 55/215 (25.58%), Postives = 70/215 (32.56%), Query Frame = 0


Query: 22  KEGDWECSGCKNRNYAFRSFCNRCKQPR--------LLVDN-----------KTPPDSKW 81
           + GDW C  C + N+  R  C RC   R        L   N            T  D   
Sbjct: 3   RPGDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSD--- 62

Query: 82  LPRIGDWICT--GCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGG 141
             R GDW CT   C  +N+ASR  C KCG  K+                           
Sbjct: 63  -VRPGDWYCTVGNCGTHNFASRSTCFKCGTFKD--------------------------- 122

Query: 142 LDTKMNLGLIGNGTSQQLHPLSSNWSLGGADKYGIHAAPT-FPLGGNNSAISYMSSPNQI 201
                  G  G G             +GG   +      +  P  G  S+          
Sbjct: 123 -----ETGAGGGG-----------GGIGGPAMFDADIMRSRVPGNGGRSS---------- 154

Query: 202 LSVPKGWRSGDWIC---NCGFHNYSSRAQCKKCNA 212
                 W+SGDWIC    C  HN++SR +C +CNA
Sbjct: 183 ------WKSGDWICTRIGCNEHNFASRMECFRCNA 154

The following BLAST results are available for this feature:

BLAST of Lcy04g018310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13801	4.8e-07	26.32	Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (stra...	[more]
O95218	7.0e-06	32.53	Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=Z...	[more]
Q9R020	7.0e-06	32.53	Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=...	[more]
Q19QU3	7.0e-06	32.53	Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRA...	[more]
Q5R580	7.0e-06	32.53	Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii OX=9601 GN=Z...	[more]

BLAST of Lcy04g018310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGM9	1.1e-192	92.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505830 PE=4 SV=1	[more]
A0A1S3B1J3	1.5e-192	92.35	uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1EFP4	2.4e-190	93.86	uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1BXT0	5.3e-190	92.35	uncharacterized RNA-binding protein C17H9.04c OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1KT42	2.6e-189	93.57	uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Lcy04g018310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883349.1	8.6e-195	94.12	uncharacterized RNA-binding protein C17H9.04c [Benincasa hispida]	[more]
XP_004134868.1	2.3e-192	92.65	uncharacterized RNA-binding protein C17H9.04c [Cucumis sativus] >KGN48905.1 hypo...	[more]
XP_008440810.1	3.0e-192	92.35	PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo]	[more]
XP_022926922.1	4.9e-190	93.86	uncharacterized RNA-binding protein C17H9.04c [Cucurbita moschata] >XP_023518720...	[more]
XP_022132998.1	1.1e-189	92.35	uncharacterized RNA-binding protein C17H9.04c [Momordica charantia]	[more]

BLAST of Lcy04g018310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17975.1	1.1e-96	55.21	zinc finger (Ran-binding) family protein	[more]
AT5G25490.1	3.5e-13	29.28	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT2G26695.1	3.0e-12	28.19	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G48570.1	6.9e-09	35.90	zinc finger (Ran-binding) family protein	[more]
AT3G15680.1	7.6e-08	25.58	Ran BP2/NZF zinc finger-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 189..212 e-value: 6.8E-5 score: 32.3 coord: 67..91 e-value: 2.1E-8 score: 43.9 coord: 305..329 e-value: 1.5E-6 score: 37.8 coord: 24..48 e-value: 1.8E-6 score: 37.5
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 65..93 e-value: 1.9E-7 score: 30.3 coord: 22..49 e-value: 3.7E-7 score: 29.3 coord: 303..330 e-value: 3.8E-7 score: 29.3
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 307..326
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 69..88
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 26..45
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 22..51 score: 9.946939
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 303..332 score: 10.296997
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 65..94 score: 10.071154
None	No IPR available	GENE3D	4.10.1060.10		coord: 18..50 e-value: 4.6E-9 score: 37.4 coord: 60..94 e-value: 2.5E-10 score: 41.4 coord: 298..332 e-value: 3.4E-10 score: 41.0 coord: 183..214 e-value: 1.7E-8 score: 35.6
None	No IPR available	PANTHER	PTHR23111:SF71	OS04G0110600 PROTEIN	coord: 20..154 coord: 184..257 coord: 289..338
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 20..154 coord: 184..257 coord: 289..338
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 185..212
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 297..331
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 59..93
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 22..50

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g018310.1	Lcy04g018310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding