Lcy04g017630 (gene) Sponge gourd (P93075) v1

Overview
NameLcy04g017630
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr04: 49660599 .. 49663299 (-)
RNA-Seq ExpressionLcy04g017630
SyntenyLcy04g017630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCCATACAAAATTCCCAAGTGGAACAGATACTTCAAAACAGAGAAACACAAATATTTCAATATTTCGTAAGAAACCATTATATCATGATCACTCTAACAGCACAGTCTCCATTAGAATCAACATGGGCTCAGACCATATCTCTGCTCGAAAACTGCTCAAACATGAAGCAATTGAAACAAATTCACGCTCAAATGATCAAAACAGAGACCATTGCAGACCCCCAGTTAGCCACCAAGCTTCTAACTCTCTGCACTTCACCCCATTTCGGCGATTTACATTACGCTCAAAAGATCTTCAATGGAATCACCAGTCCCACCACTTTCATGTGGAATGCGATTATAAGAGCGTATTCGAACAGTAACGAACCAGAATTGGCATTTCTCTTGTATCGTCAGATGCTTTCTTCTTCTGTACCGCACAATTCTTACACCTTCCCTTTCTTGCTCAAAGCTTGTCGCAATTTTTCGGCCATGGGAGAGGCCCTTCAAGTCCATGGACTGATGATGAAATTGGGATTTGGGTCGGATGTTTTTGCTTTGAATTCTCTGCTTCATGTCTATGCTTTGTGTGGTGACATTCAGTATGCACGCCAACTGTTTGATAATATTCCTGAAAGAGATGTCGTATCTTGGAACACTATGATTGATGGATATATCAAATTTGGGGACGTAGAAACGGCTTATGGGGTTTTCTTGGACATGCCAATGAAGAATTTGGTCTCGTGGACGTCGATGATTTCGGGACTTGTTGAGGCAGGATTGAACGTGGTAGCTTTGAATCTTTGTTATGAAATGCAGATGGCGGGATTTGAACTTGATGGGATTGTTATTGCGAGTTCGCTCACTGCTTGTGCAAATCTTGGAGCGTTGGATCAAGGAAGATGGCTACATTTCTATGTGCTCAACAATGGTGTCCATATAGATAAAGTTATTGGCTGCGCTCTGGTGAATATGTACTTGAAATGTGGGGATATGGAAGAAGCCTTGCGGGTGTTTGGGAAACTGAAGGGTGATCAGAAAGATGTGTATGTTTGGACGGCCATGATTGATGGTTTTGCCATCCATGGGCGTGGAGTGGAAGCTCTGGAATGGTTTGACAGAATGGTGAAAGAAGGAATAAGACCAAATTCCATCACTTTCACTGCAATTTTGACGGCCTGCAGCTATGCAGGACTGGTTGAAGAAGGAAAAGTTTTATTCAGGAGCATGAAAAGTCTCTATAACTTGAGCCCATCTATTGAGCATTACGGGTGTATGGTTGATCTTTTGGGTCGAGCTGGGCTGCTGGAGGAGGCTAAGGAGTTGATCAAGAAGATGCCCATGAAACCTAATGCTGTAATATGGGGAGCTTTGCTAAAGGTAAGGAAAGGGTACTACAGAAGCAGTCTCTAGTGATTAAAAATTTTTAATTTACTTCACTCACATTTTAACAATTTTCAATTTTTTTACTTTGGGTTAGTGGATCAGGTTTAAATATGGGTGATGTTACATTTTACCTGACATAATACTCAATAAAATGATAGAAACTTAGAGGAAGAATCGAGCTATCTAGGAGAAAGAGTCGAATATTCACCCAATTTAAAAATTTGTTAGAAGAATTACAAATTTTCCTCATCTTTTAAGTAACTTCATTTCTCCTCTAAATTTTTAATTGACTCTCGGCAGCCACATTTAATATTTATCCTAGAATTCGTAGGATATTAGAACTTCTTTAGACTACATCAAGGACTTTAGTCTCATGTTTGAGATAACAAATTAAGAATTTAAATTTCAAAATCTTAAATCTTTTATATAATTTTCTTAATCTAAGATAGTTGGGGCAATTGTCACATTTCCTTCCTCCTTGTTTAGGCCTGTCGGATTCATGGAAATTTTCTGCTCGGCAGCCAAATCGGAGCCCACCTGGTGGAAGTTGATTCAGATCACAGCGGCCGGTACATTCACTTGGCTAGCATTCTTGCTGCAGAAGGTAAATGGAAAGAAGCAGCTGAAGTGAGGTTGAAGATGAAGAATCTCAGAATCCCAATTCCTCCAGGAAAGAGTTTGATAACTTTGAATGGCGTTGTTCATGAATTTCTTGCTGGGCATCAAGATCATCCACAGATCGAACAGATTCATCAGAAGTTGAACCAGGTTGCAGAGAGGCTCCAACAAGAAGAAGGGTAATCTTAAATCACCAGAATCTAAAAACTTAAACAGATAGGTTACGGTAAATATAATCTAACACTTTCGTTAATATTGTTTTTAACAGATATGTGCCTAAGACTAAAGATTTATTGCTTGATCTTGAGAGTGAGGAGAAAGAAACTGCAATGGCACAACATAGTGAGAAGCTGGCGATTGCGTTTGGATTGATCAATACGAAACCAGGGACGACGATTCGAGTTGTTAAGAATCTTAGGGTATGTGAAGATTGTCACACTGTTGCGAAGCTCGTATCTCAGATCTATGGTAGAGAGATAATAATGCGAGATAGAGTTCGATTCCACCATTTTAGAGATGGGAGTTGCTCTTGCAGAGATTACTGGTAGAAGGGCAAGATTTTTATGTACAGATTATGATGTTCTTTTGTTAATTTTAGGCGTGTAATATGACATTTTATTTTATGCGTTCATGTTAATATTAAACATTTTCTTCTACAGGAGTAGAGAATCGAATCATTAACTTTTGGAATGTTAATATTAAACTGGTTGTGGTTTC

mRNA sequence

GTCCATACAAAATTCCCAAGTGGAACAGATACTTCAAAACAGAGAAACACAAATATTTCAATATTTCGTAAGAAACCATTATATCATGATCACTCTAACAGCACAGTCTCCATTAGAATCAACATGGGCTCAGACCATATCTCTGCTCGAAAACTGCTCAAACATGAAGCAATTGAAACAAATTCACGCTCAAATGATCAAAACAGAGACCATTGCAGACCCCCAGTTAGCCACCAAGCTTCTAACTCTCTGCACTTCACCCCATTTCGGCGATTTACATTACGCTCAAAAGATCTTCAATGGAATCACCAGTCCCACCACTTTCATGTGGAATGCGATTATAAGAGCGTATTCGAACAGTAACGAACCAGAATTGGCATTTCTCTTGTATCGTCAGATGCTTTCTTCTTCTGTACCGCACAATTCTTACACCTTCCCTTTCTTGCTCAAAGCTTGTCGCAATTTTTCGGCCATGGGAGAGGCCCTTCAAGTCCATGGACTGATGATGAAATTGGGATTTGGGTCGGATGTTTTTGCTTTGAATTCTCTGCTTCATGTCTATGCTTTGTGTGGTGACATTCAGTATGCACGCCAACTGTTTGATAATATTCCTGAAAGAGATGTCGTATCTTGGAACACTATGATTGATGGATATATCAAATTTGGGGACGTAGAAACGGCTTATGGGGTTTTCTTGGACATGCCAATGAAGAATTTGGTCTCGTGGACGTCGATGATTTCGGGACTTGTTGAGGCAGGATTGAACGTGGTAGCTTTGAATCTTTGTTATGAAATGCAGATGGCGGGATTTGAACTTGATGGGATTGTTATTGCGAGTTCGCTCACTGCTTGTGCAAATCTTGGAGCGTTGGATCAAGGAAGATGGCTACATTTCTATGTGCTCAACAATGGTGTCCATATAGATAAAGTTATTGGCTGCGCTCTGGTGAATATGTACTTGAAATGTGGGGATATGGAAGAAGCCTTGCGGGTGTTTGGGAAACTGAAGGGTGATCAGAAAGATGTGTATGTTTGGACGGCCATGATTGATGGTTTTGCCATCCATGGGCGTGGAGTGGAAGCTCTGGAATGGTTTGACAGAATGGTGAAAGAAGGAATAAGACCAAATTCCATCACTTTCACTGCAATTTTGACGGCCTGCAGCTATGCAGGACTGGTTGAAGAAGGAAAAGTTTTATTCAGGAGCATGAAAAGTCTCTATAACTTGAGCCCATCTATTGAGCATTACGGGTGTATGGTTGATCTTTTGGGTCGAGCTGGGCTGCTGGAGGAGGCTAAGGAGTTGATCAAGAAGATGCCCATGAAACCTAATGCTGTAATATGGGGAGCTTTGCTAAAGGCCTGTCGGATTCATGGAAATTTTCTGCTCGGCAGCCAAATCGGAGCCCACCTGGTGGAAGTTGATTCAGATCACAGCGGCCGGTACATTCACTTGGCTAGCATTCTTGCTGCAGAAGGTAAATGGAAAGAAGCAGCTGAAGTGAGGTTGAAGATGAAGAATCTCAGAATCCCAATTCCTCCAGGAAAGAGTTTGATAACTTTGAATGGCGTTGTTCATGAATTTCTTGCTGGGCATCAAGATCATCCACAGATCGAACAGATTCATCAGAAGTTGAACCAGGTTGCAGAGAGGCTCCAACAAGAAGAAGGATATGTGCCTAAGACTAAAGATTTATTGCTTGATCTTGAGAGTGAGGAGAAAGAAACTGCAATGGCACAACATAGTGAGAAGCTGGCGATTGCGTTTGGATTGATCAATACGAAACCAGGGACGACGATTCGAGTTGTTAAGAATCTTAGGGTATGTGAAGATTGTCACACTGTTGCGAAGCTCGTATCTCAGATCTATGGTAGAGAGATAATAATGCGAGATAGAGTTCGATTCCACCATTTTAGAGATGGGAGTTGCTCTTGCAGAGATTACTGGTAGAAGGGCAAGATTTTTATGTACAGATTATGATGTTCTTTTGTTAATTTTAGGCGTGTAATATGACATTTTATTTTATGCGTTCATGTTAATATTAAACATTTTCTTCTACAGGAGTAGAGAATCGAATCATTAACTTTTGGAATGTTAATATTAAACTGGTTGTGGTTTC

Coding sequence (CDS)

ATGATCACTCTAACAGCACAGTCTCCATTAGAATCAACATGGGCTCAGACCATATCTCTGCTCGAAAACTGCTCAAACATGAAGCAATTGAAACAAATTCACGCTCAAATGATCAAAACAGAGACCATTGCAGACCCCCAGTTAGCCACCAAGCTTCTAACTCTCTGCACTTCACCCCATTTCGGCGATTTACATTACGCTCAAAAGATCTTCAATGGAATCACCAGTCCCACCACTTTCATGTGGAATGCGATTATAAGAGCGTATTCGAACAGTAACGAACCAGAATTGGCATTTCTCTTGTATCGTCAGATGCTTTCTTCTTCTGTACCGCACAATTCTTACACCTTCCCTTTCTTGCTCAAAGCTTGTCGCAATTTTTCGGCCATGGGAGAGGCCCTTCAAGTCCATGGACTGATGATGAAATTGGGATTTGGGTCGGATGTTTTTGCTTTGAATTCTCTGCTTCATGTCTATGCTTTGTGTGGTGACATTCAGTATGCACGCCAACTGTTTGATAATATTCCTGAAAGAGATGTCGTATCTTGGAACACTATGATTGATGGATATATCAAATTTGGGGACGTAGAAACGGCTTATGGGGTTTTCTTGGACATGCCAATGAAGAATTTGGTCTCGTGGACGTCGATGATTTCGGGACTTGTTGAGGCAGGATTGAACGTGGTAGCTTTGAATCTTTGTTATGAAATGCAGATGGCGGGATTTGAACTTGATGGGATTGTTATTGCGAGTTCGCTCACTGCTTGTGCAAATCTTGGAGCGTTGGATCAAGGAAGATGGCTACATTTCTATGTGCTCAACAATGGTGTCCATATAGATAAAGTTATTGGCTGCGCTCTGGTGAATATGTACTTGAAATGTGGGGATATGGAAGAAGCCTTGCGGGTGTTTGGGAAACTGAAGGGTGATCAGAAAGATGTGTATGTTTGGACGGCCATGATTGATGGTTTTGCCATCCATGGGCGTGGAGTGGAAGCTCTGGAATGGTTTGACAGAATGGTGAAAGAAGGAATAAGACCAAATTCCATCACTTTCACTGCAATTTTGACGGCCTGCAGCTATGCAGGACTGGTTGAAGAAGGAAAAGTTTTATTCAGGAGCATGAAAAGTCTCTATAACTTGAGCCCATCTATTGAGCATTACGGGTGTATGGTTGATCTTTTGGGTCGAGCTGGGCTGCTGGAGGAGGCTAAGGAGTTGATCAAGAAGATGCCCATGAAACCTAATGCTGTAATATGGGGAGCTTTGCTAAAGGCCTGTCGGATTCATGGAAATTTTCTGCTCGGCAGCCAAATCGGAGCCCACCTGGTGGAAGTTGATTCAGATCACAGCGGCCGGTACATTCACTTGGCTAGCATTCTTGCTGCAGAAGGTAAATGGAAAGAAGCAGCTGAAGTGAGGTTGAAGATGAAGAATCTCAGAATCCCAATTCCTCCAGGAAAGAGTTTGATAACTTTGAATGGCGTTGTTCATGAATTTCTTGCTGGGCATCAAGATCATCCACAGATCGAACAGATTCATCAGAAGTTGAACCAGGTTGCAGAGAGGCTCCAACAAGAAGAAGGATATGTGCCTAAGACTAAAGATTTATTGCTTGATCTTGAGAGTGAGGAGAAAGAAACTGCAATGGCACAACATAGTGAGAAGCTGGCGATTGCGTTTGGATTGATCAATACGAAACCAGGGACGACGATTCGAGTTGTTAAGAATCTTAGGGTATGTGAAGATTGTCACACTGTTGCGAAGCTCGTATCTCAGATCTATGGTAGAGAGATAATAATGCGAGATAGAGTTCGATTCCACCATTTTAGAGATGGGAGTTGCTCTTGCAGAGATTACTGGTAG

Protein sequence

MITLTAQSPLESTWAQTISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPHFGDLHYAQKIFNGITSPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFLLKACRNFSAMGEALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERDVVSWNTMIDGYIKFGDVETAYGVFLDMPMKNLVSWTSMISGLVEAGLNVVALNLCYEMQMAGFELDGIVIASSLTACANLGALDQGRWLHFYVLNNGVHIDKVIGCALVNMYLKCGDMEEALRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGIRPNSITFTAILTACSYAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKKMPMKPNAVIWGALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRYIHLASILAAEGKWKEAAEVRLKMKNLRIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIHQKLNQVAERLQQEEGYVPKTKDLLLDLESEEKETAMAQHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCHTVAKLVSQIYGREIIMRDRVRFHHFRDGSCSCRDYW
Homology
BLAST of Lcy04g017630 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 7.5e-200
Identity = 341/623 (54.74%), Postives = 447/623 (71.75%), Query Frame = 0

Query: 1   MITLTAQSPLESTWAQTISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPH 60
           M  ++    LE    +T+S L+ CS  ++LKQIHA+M+KT  + D    TK L+ C S  
Sbjct: 1   MNVISCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISST 60

Query: 61  FGD-LHYAQKIFNGITSPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPF 120
             D L YAQ +F+G   P TF+WN +IR +S S+EPE + LLY++ML SS PHN+YTFP 
Sbjct: 61  SSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPS 120

Query: 121 LLKACRNFSAMGEALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERD 180
           LLKAC N SA  E  Q+H  + KLG+ +DV+A+NSL++ YA+ G+ + A  LFD IPE D
Sbjct: 121 LLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPD 180

Query: 181 VVSWNTMIDGYIKFGDVETAYGVFLDMPMKNLVSWTSMISGLVEAGLNVVALNLCYEMQM 240
            VSWN++I GY+K G ++ A  +F  M  KN +SWT+MISG V+A +N  AL L +EMQ 
Sbjct: 181 DVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQN 240

Query: 241 AGFELDGIVIASSLTACANLGALDQGRWLHFYVLNNGVHIDKVIGCALVNMYLKCGDMEE 300
           +  E D + +A++L+ACA LGAL+QG+W+H Y+    + +D V+GC L++MY KCG+MEE
Sbjct: 241 SDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 300

Query: 301 ALRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGIRPNSITFTAILTAC 360
           AL VF  +K  +K V  WTA+I G+A HG G EA+  F  M K GI+PN ITFTA+LTAC
Sbjct: 301 ALEVFKNIK--KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTAC 360

Query: 361 SYAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKKMPMKPNAVI 420
           SY GLVEEGK++F SM+  YNL P+IEHYGC+VDLLGRAGLL+EAK  I++MP+KPNAVI
Sbjct: 361 SYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI 420

Query: 421 WGALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRYIHLASILAAEGKWKEAAEVRLKMKN 480
           WGALLKACRIH N  LG +IG  L+ +D  H GRY+H A+I A + KW +AAE R  MK 
Sbjct: 421 WGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKE 480

Query: 481 LRIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIHQKLNQVAERLQQEEGYVPKTKDLLL 540
             +   PG S I+L G  HEFLAG + HP+IE+I  K  ++  R  +E GYVP+ +++LL
Sbjct: 481 QGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKW-RIMRRKLEENGYVPELEEMLL 540

Query: 541 DL-ESEEKETAMAQHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCHTVAKLVSQIYGRE 600
           DL + +E+E  + QHSEKLAI +GLI TKPGT IR++KNLRVC+DCH V KL+S+IY R+
Sbjct: 541 DLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRD 600

Query: 601 IIMRDRVRFHHFRDGSCSCRDYW 622
           I+MRDR RFHHFRDG CSC DYW
Sbjct: 601 IVMRDRTRFHHFRDGKCSCGDYW 620

BLAST of Lcy04g017630 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 7.4e-155
Identity = 282/636 (44.34%), Postives = 410/636 (64.47%), Query Frame = 0

Query: 8   SPLESTWAQTISL---LENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSP--HFG 67
           SP  S  +   SL   + NC  ++ L QIHA  IK+  + D   A ++L  C +   H  
Sbjct: 14  SPASSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR 73

Query: 68  DLHYAQKIFNGITSPTTFMWNAIIRAYSNSNEPE--LAFLLYRQMLSSS-VPHNSYTFPF 127
           DL YA KIFN +     F WN IIR +S S+E +  +A  L+ +M+S   V  N +TFP 
Sbjct: 74  DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133

Query: 128 LLKACRNFSAMGEALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLF-DNIPER 187
           +LKAC     + E  Q+HGL +K GFG D F +++L+ +Y +CG ++ AR LF  NI E+
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193

Query: 188 D-------------VVSWNTMIDGYIKFGDVETAYGVFLDMPMKNLVSWTSMISGLVEAG 247
           D             +V WN MIDGY++ GD + A  +F  M  +++VSW +MISG    G
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253

Query: 248 LNVVALNLCYEMQMAGFELDGIVIASSLTACANLGALDQGRWLHFYVLNNGVHIDKVIGC 307
               A+ +  EM+      + + + S L A + LG+L+ G WLH Y  ++G+ ID V+G 
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313

Query: 308 ALVNMYLKCGDMEEALRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGI 367
           AL++MY KCG +E+A+ VF +L   +++V  W+AMI+GFAIHG+  +A++ F +M + G+
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERL--PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 373

Query: 368 RPNSITFTAILTACSYAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAK 427
           RP+ + +  +LTACS+ GLVEEG+  F  M S+  L P IEHYGCMVDLLGR+GLL+EA+
Sbjct: 374 RPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAE 433

Query: 428 ELIKKMPMKPNAVIWGALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRYIHLASILAAEG 487
           E I  MP+KP+ VIW ALL ACR+ GN  +G ++   L+++    SG Y+ L+++ A++G
Sbjct: 434 EFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQG 493

Query: 488 KWKEAAEVRLKMKNLRIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIHQKLNQVAERLQ 547
            W E +E+RL+MK   I   PG SLI ++GV+HEF+     HP+ ++I+  L +++++L+
Sbjct: 494 NWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLR 553

Query: 548 QEEGYVPKTKDLLLDLESEEKETAMAQHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCH 607
              GY P T  +LL+LE E+KE  +  HSEK+A AFGLI+T PG  IR+VKNLR+CEDCH
Sbjct: 554 L-AGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCH 613

Query: 608 TVAKLVSQIYGREIIMRDRVRFHHFRDGSCSCRDYW 622
           +  KL+S++Y R+I +RDR RFHHF+DGSCSC DYW
Sbjct: 614 SSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

BLAST of Lcy04g017630 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 5.1e-148
Identity = 264/610 (43.28%), Postives = 400/610 (65.57%), Query Frame = 0

Query: 18  ISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPHFGD-----LHYAQKIFN 77
           ++LL++CS+   LK IH  +++T  I+D  +A++LL LC      +     L YA  IF+
Sbjct: 16  LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75

Query: 78  GITSPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFLLKACRNFSAMGE 137
            I +P  F++N +IR +S   EP  AF  Y QML S +  ++ TFPFL+KA      +  
Sbjct: 76  QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135

Query: 138 ALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERDVVSWNTMIDGYIK 197
             Q H  +++ GF +DV+  NSL+H+YA CG I  A ++F  +  RDVVSW +M+ GY K
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195

Query: 198 FGDVETAYGVFLDMPMKNLVSWTSMISGLVEAGLNVVALNLCYEMQMAGFELDGIVIASS 257
            G VE A  +F +MP +NL +W+ MI+G  +      A++L   M+  G   +  V+ S 
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255

Query: 258 LTACANLGALDQGRWLHFYVLNNGVHIDKVIGCALVNMYLKCGDMEEALRVFGKLKGDQK 317
           +++CA+LGAL+ G   + YV+ + + ++ ++G ALV+M+ +CGD+E+A+ VF  L   + 
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL--PET 315

Query: 318 DVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGIRPNSITFTAILTACSYAGLVEEGKVLF 377
           D   W+++I G A+HG   +A+ +F +M+  G  P  +TFTA+L+ACS+ GLVE+G  ++
Sbjct: 316 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 375

Query: 378 RSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKKMPMKPNAVIWGALLKACRIHGN 437
            +MK  + + P +EHYGC+VD+LGRAG L EA+  I KM +KPNA I GALL AC+I+ N
Sbjct: 376 ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKN 435

Query: 438 FLLGSQIGAHLVEVDSDHSGRYIHLASILAAEGKWKEAAEVRLKMKNLRIPIPPGKSLIT 497
             +  ++G  L++V  +HSG Y+ L++I A  G+W +   +R  MK   +  PPG SLI 
Sbjct: 436 TEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 495

Query: 498 LNGVVHEFLAG-HQDHPQIEQIHQKLNQVAERLQQEEGYVPKTKDLLLDLESEEKETAMA 557
           ++G +++F  G  Q HP++ +I +K  ++  +++   GY   T D   D++ EEKE+++ 
Sbjct: 496 IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRL-IGYKGNTGDAFFDVDEEEKESSIH 555

Query: 558 QHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCHTVAKLVSQIYGREIIMRDRVRFHHFR 617
            HSEKLAIA+G++ TKPGTTIR+VKNLRVCEDCHTV KL+S++YGRE+I+RDR RFHHFR
Sbjct: 556 MHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFR 615

Query: 618 DGSCSCRDYW 622
           +G CSCRDYW
Sbjct: 616 NGVCSCRDYW 622

BLAST of Lcy04g017630 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 2.8e-146
Identity = 271/708 (38.28%), Postives = 407/708 (57.49%), Query Frame = 0

Query: 18  ISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPHFGDLHYAQKIFNGITSP 77
           ISL+E C +++QLKQ H  MI+T T +DP  A+KL  +     F  L YA+K+F+ I  P
Sbjct: 34  ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93

Query: 78  TTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPH-NSYTFPFLLKACRNFSAMGEALQV 137
            +F WN +IRAY++  +P L+   +  M+S S  + N YTFPFL+KA    S++     +
Sbjct: 94  NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153

Query: 138 HGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERDVVSWNTMIDGYIKFG-- 197
           HG+ +K   GSDVF  NSL+H Y  CGD+  A ++F  I E+DVVSWN+MI+G+++ G  
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213

Query: 198 ------------------------------------------------------------ 257
                                                                       
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273

Query: 258 ---------------------------------------DVETAYGVFLDMPMKNLVSWT 317
                                                  D E A  V   MP K++V+W 
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333

Query: 318 SMISGLVEAGLNVVALNLCYEMQM-AGFELDGIVIASSLTACANLGALDQGRWLHFYVLN 377
           ++IS   + G    AL + +E+Q+    +L+ I + S+L+ACA +GAL+ GRW+H Y+  
Sbjct: 334 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393

Query: 378 NGVHIDKVIGCALVNMYLKCGDMEEALRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEAL 437
           +G+ ++  +  AL++MY KCGD+E++  VF  +  +++DV+VW+AMI G A+HG G EA+
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV--EKRDVFVWSAMIGGLAMHGCGNEAV 453

Query: 438 EWFDRMVKEGIRPNSITFTAILTACSYAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDL 497
           + F +M +  ++PN +TFT +  ACS+ GLV+E + LF  M+S Y + P  +HY C+VD+
Sbjct: 454 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 513

Query: 498 LGRAGLLEEAKELIKKMPMKPNAVIWGALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRY 557
           LGR+G LE+A + I+ MP+ P+  +WGALL AC+IH N  L       L+E++  + G +
Sbjct: 514 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAH 573

Query: 558 IHLASILAAEGKWKEAAEVRLKMKNLRIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIH 617
           + L++I A  GKW+  +E+R  M+   +   PG S I ++G++HEFL+G   HP  E+++
Sbjct: 574 VLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVY 633

Query: 618 QKLNQVAERLQQEEGYVPKTKDLLLDLESEE-KETAMAQHSEKLAIAFGLINTKPGTTIR 622
            KL++V E+L +  GY P+   +L  +E EE KE ++  HSEKLAI +GLI+T+    IR
Sbjct: 634 GKLHEVMEKL-KSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIR 693

BLAST of Lcy04g017630 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 6.5e-143
Identity = 277/709 (39.07%), Postives = 398/709 (56.14%), Query Frame = 0

Query: 17  TISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLC-TSPHFGDLHYAQKIFNGIT 76
           ++SLL NC  ++ L+ IHAQMIK          +KL+  C  SPHF  L YA  +F  I 
Sbjct: 36  SLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95

Query: 77  SPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFLLKACRNFSAMGEALQ 136
            P   +WN + R ++ S++P  A  LY  M+S  +  NSYTFPF+LK+C    A  E  Q
Sbjct: 96  EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155

Query: 137 VHGLMMKLGFGSDVFALNSLLHV-------------------------------YALCGD 196
           +HG ++KLG   D++   SL+ +                               YA  G 
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215

Query: 197 IQYARQLFDNIPERDVVSWNTMIDGYI--------------------------------- 256
           I+ A++LFD IP +DVVSWN MI GY                                  
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275

Query: 257 -------------------------------------KFGDVETAYGVFLDMPMKNLVSW 316
                                                K G++ETA G+F  +P K+++SW
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335

Query: 317 TSMISGLVEAGLNVVALNLCYEMQMAGFELDGIVIASSLTACANLGALDQGRWLHFYVLN 376
            ++I G     L   AL L  EM  +G   + + + S L ACA+LGA+D GRW+H Y+  
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395

Query: 377 --NGVHIDKVIGCALVNMYLKCGDMEEALRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVE 436
              GV     +  +L++MY KCGD+E A +VF  +    K +  W AMI GFA+HGR   
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL--HKSLSSWNAMIFGFAMHGRADA 455

Query: 437 ALEWFDRMVKEGIRPNSITFTAILTACSYAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMV 496
           + + F RM K GI+P+ ITF  +L+ACS++G+++ G+ +FR+M   Y ++P +EHYGCM+
Sbjct: 456 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 515

Query: 497 DLLGRAGLLEEAKELIKKMPMKPNAVIWGALLKACRIHGNFLLGSQIGAHLVEVDSDHSG 556
           DLLG +GL +EA+E+I  M M+P+ VIW +LLKAC++HGN  LG     +L++++ ++ G
Sbjct: 516 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG 575

Query: 557 RYIHLASILAAEGKWKEAAEVRLKMKNLRIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQ 616
            Y+ L++I A+ G+W E A+ R  + +  +   PG S I ++ VVHEF+ G + HP+  +
Sbjct: 576 SYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 635

Query: 617 IHQKLNQVAERLQQEEGYVPKTKDLLLDLESEEKETAMAQHSEKLAIAFGLINTKPGTTI 622
           I+  L ++ E L ++ G+VP T ++L ++E E KE A+  HSEKLAIAFGLI+TKPGT +
Sbjct: 636 IYGMLEEM-EVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKL 695

BLAST of Lcy04g017630 vs. ExPASy TrEMBL
Match: A0A6J1GDX2 (pentatricopeptide repeat-containing protein At5g66520 OS=Cucurbita moschata OX=3662 GN=LOC111453066 PE=3 SV=1)

HSP 1 Score: 1130.9 bits (2924), Expect = 0.0e+00
Identity = 545/621 (87.76%), Postives = 586/621 (94.36%), Query Frame = 0

Query: 1   MITLTAQSPLESTWAQTISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPH 60
           M  L A+SP++STWAQT+SLLENCSNMKQLK+IHAQMI+T T  +P+LATKLLTLC SPH
Sbjct: 1   MFALKAESPVQSTWAQTMSLLENCSNMKQLKEIHAQMIRTGTATEPKLATKLLTLCISPH 60

Query: 61  FGDLHYAQKIFNGITSPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL 120
           FGDLHYAQ++FNGI+SPTTFMWNA+IRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL
Sbjct: 61  FGDLHYAQRVFNGISSPTTFMWNAMIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL 120

Query: 121 LKACRNFSAMGEALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERDV 180
           LKACRNFSAM EALQVHGL++KLGFGSDVFALN+LLHVYALCGDIQYARQLFDNIPERD+
Sbjct: 121 LKACRNFSAMSEALQVHGLVIKLGFGSDVFALNALLHVYALCGDIQYARQLFDNIPERDI 180

Query: 181 VSWNTMIDGYIKFGDVETAYGVFLDMPMKNLVSWTSMISGLVEAGLNVVALNLCYEMQMA 240
           VSWN MIDGYIK GDV+TAYGVFLDMP+KN+VSWTS+ISGLVEAGLNV AL+LC+EMQ A
Sbjct: 181 VSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGLNVEALSLCHEMQNA 240

Query: 241 GFELDGIVIASSLTACANLGALDQGRWLHFYVLNNGVHIDKVIGCALVNMYLKCGDMEEA 300
           GFELDG+ IAS LTACANLGALDQGRWLHFYVLNNGVH+D+VIGCALVNMYLKCGDMEEA
Sbjct: 241 GFELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVHVDRVIGCALVNMYLKCGDMEEA 300

Query: 301 LRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGIRPNSITFTAILTACS 360
           LR FGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWF RM++EGIRPNSITFTA+L ACS
Sbjct: 301 LREFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFKRMLREGIRPNSITFTAVLRACS 360

Query: 361 YAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKKMPMKPNAVIW 420
           YAGLVEEGKVLF SM S+YNLSPSIEHYGCMVDLLGRAGLLEEAKELIK MPM+PNA+IW
Sbjct: 361 YAGLVEEGKVLFESMMSVYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKTMPMEPNAIIW 420

Query: 421 GALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRYIHLASILAAEGKWKEAAEVRLKMKNL 480
           GALLKACRIH +FL+G QIGAHLVEVDSDHSGRYI LA+ILAAEGKWKEAAEVRLKMKNL
Sbjct: 421 GALLKACRIHRDFLVGGQIGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNL 480

Query: 481 RIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIHQKLNQVAERLQQEEGYVPKTKDLLLD 540
           R+PIPPGKS ITLNGVVHEFLAGHQDHPQ+EQI  KLNQV ERL+Q EGY P TKDLLLD
Sbjct: 481 RLPIPPGKSSITLNGVVHEFLAGHQDHPQMEQILHKLNQVVERLRQHEGYEPATKDLLLD 540

Query: 541 LESEEKETAMAQHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCHTVAKLVSQIYGREII 600
           LESE KETA+AQHSEKLAIAFGLINTKPG+TIRVVKNLRVCEDCH VAKL+SQIY REII
Sbjct: 541 LESEAKETAVAQHSEKLAIAFGLINTKPGSTIRVVKNLRVCEDCHVVAKLISQIYRREII 600

Query: 601 MRDRVRFHHFRDGSCSCRDYW 622
           MRDRVRFHHFR G+CSC DYW
Sbjct: 601 MRDRVRFHHFRGGNCSCNDYW 621

BLAST of Lcy04g017630 vs. ExPASy TrEMBL
Match: A0A6J1IT43 (pentatricopeptide repeat-containing protein At5g66520 OS=Cucurbita maxima OX=3661 GN=LOC111478422 PE=3 SV=1)

HSP 1 Score: 1129.8 bits (2921), Expect = 0.0e+00
Identity = 544/621 (87.60%), Postives = 587/621 (94.52%), Query Frame = 0

Query: 1   MITLTAQSPLESTWAQTISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPH 60
           M  L A+SP++STWAQT+SLLENCSNMKQLK+IHAQMI+T T  +P+LATKLLTLCTSPH
Sbjct: 1   MFALKAESPMQSTWAQTMSLLENCSNMKQLKEIHAQMIRTGTATEPKLATKLLTLCTSPH 60

Query: 61  FGDLHYAQKIFNGITSPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL 120
           FGDLHYAQ++FNGI+SPTTFMWNA+IRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL
Sbjct: 61  FGDLHYAQRVFNGISSPTTFMWNAMIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL 120

Query: 121 LKACRNFSAMGEALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERDV 180
           LKACRNFSAM EALQVHGL++KLGFGSDVFALN+LLHVYALCGDIQYARQLFDNIPERD+
Sbjct: 121 LKACRNFSAMSEALQVHGLVIKLGFGSDVFALNALLHVYALCGDIQYARQLFDNIPERDI 180

Query: 181 VSWNTMIDGYIKFGDVETAYGVFLDMPMKNLVSWTSMISGLVEAGLNVVALNLCYEMQMA 240
           VSWN MIDGYIK GDV+TAYGVFLDMP+KN+VSWTS+ISGLVEAGLNV AL+LC+EMQ A
Sbjct: 181 VSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGLNVEALSLCHEMQNA 240

Query: 241 GFELDGIVIASSLTACANLGALDQGRWLHFYVLNNGVHIDKVIGCALVNMYLKCGDMEEA 300
           GFELDG+ IAS LTACANLGALDQGRWLHFYVLNNGVH+D+VIGCALVNMYLKCGDMEEA
Sbjct: 241 GFELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVHVDRVIGCALVNMYLKCGDMEEA 300

Query: 301 LRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGIRPNSITFTAILTACS 360
           L+ FGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWF RM++EGIRPNSITFTA+L ACS
Sbjct: 301 LQEFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFKRMLREGIRPNSITFTAVLRACS 360

Query: 361 YAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKKMPMKPNAVIW 420
           YAGLVEEGKVLF SM S+Y LSPSIEHYGCMVDLLGRAGLLEEAKELIK MPMKPNA+IW
Sbjct: 361 YAGLVEEGKVLFESMMSVYILSPSIEHYGCMVDLLGRAGLLEEAKELIKTMPMKPNAIIW 420

Query: 421 GALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRYIHLASILAAEGKWKEAAEVRLKMKNL 480
           GALLKACRIH +FL+G QIGAHLVEVDSDHSGRYI LA+ILAAEGKWKEAAEVRLKMKNL
Sbjct: 421 GALLKACRIHRDFLVGGQIGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNL 480

Query: 481 RIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIHQKLNQVAERLQQEEGYVPKTKDLLLD 540
           R+PIPPGKS ITLNGVVHEFLAGHQDHPQ+EQI  KLNQV ERL+Q EGY P TKDLLLD
Sbjct: 481 RVPIPPGKSSITLNGVVHEFLAGHQDHPQMEQILHKLNQVVERLRQHEGYEPATKDLLLD 540

Query: 541 LESEEKETAMAQHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCHTVAKLVSQIYGREII 600
           LE+E KETA+AQHSEKLAIAFGLINTKPG+TIRVVKNLRVCEDCH VAKL+S+IY REII
Sbjct: 541 LENEAKETAVAQHSEKLAIAFGLINTKPGSTIRVVKNLRVCEDCHVVAKLISRIYRREII 600

Query: 601 MRDRVRFHHFRDGSCSCRDYW 622
           MRDRVRFHHFR GSCSC+DYW
Sbjct: 601 MRDRVRFHHFRGGSCSCKDYW 621

BLAST of Lcy04g017630 vs. ExPASy TrEMBL
Match: A0A5D3CKZ8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002030 PE=3 SV=1)

HSP 1 Score: 1083.9 bits (2802), Expect = 0.0e+00
Identity = 525/621 (84.54%), Postives = 571/621 (91.95%), Query Frame = 0

Query: 1   MITLTAQSPLESTWAQTISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPH 60
           M TL A+SPL+STW    +LLENCSNMKQLKQI AQMIKT  +++P+LATK LTLCTSPH
Sbjct: 1   MFTLKAESPLQSTW----TLLENCSNMKQLKQIQAQMIKTAILSEPKLATKFLTLCTSPH 60

Query: 61  FGDLHYAQKIFNGITSPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL 120
            GDL YAQ++FNGITSP T MWNAIIRAYSNS EPELAFLLY+QMLSSSVPHNSYTFPFL
Sbjct: 61  VGDLLYAQRVFNGITSPNTVMWNAIIRAYSNSKEPELAFLLYQQMLSSSVPHNSYTFPFL 120

Query: 121 LKACRNFSAMGEALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERDV 180
           LKACRN SA+GEALQVHGL++KLGFGSDVFALN+LLHVYALCG+I+YARQ+FDNIPERD 
Sbjct: 121 LKACRNLSALGEALQVHGLVIKLGFGSDVFALNALLHVYALCGEIRYARQMFDNIPERDA 180

Query: 181 VSWNTMIDGYIKFGDVETAYGVFLDMPMKNLVSWTSMISGLVEAGLNVVALNLCYEMQMA 240
           VSWN MIDGYIK GDV+TAYG+FLDMP KN+VSWTS+ISGLV AGL+V AL+LCYEMQ A
Sbjct: 181 VSWNIMIDGYIKSGDVKTAYGIFLDMPSKNVVSWTSLISGLVGAGLSVKALSLCYEMQNA 240

Query: 241 GFELDGIVIASSLTACANLGALDQGRWLHFYVLNNGVHIDKVIGCALVNMYLKCGDMEEA 300
           GFELDG+ IA  LTACANLGALDQGRWLHFYVLNNGV +D+VIGCALVNMY+KCGDMEEA
Sbjct: 241 GFELDGVAIACLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEA 300

Query: 301 LRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGIRPNSITFTAILTACS 360
           LRVFGKLKGDQKDV +WTAMIDGFAIHGRGVEALEWFD M +EGIRPNSITFTA+L ACS
Sbjct: 301 LRVFGKLKGDQKDVCIWTAMIDGFAIHGRGVEALEWFDLMRREGIRPNSITFTAVLRACS 360

Query: 361 YAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKKMPMKPNAVIW 420
           Y GLVEEGK LF+SMK LYNLSPSIEHYGCMVDLLGR+G L EAKELIK MPMKPNAVIW
Sbjct: 361 YGGLVEEGKELFKSMKCLYNLSPSIEHYGCMVDLLGRSGRLNEAKELIKNMPMKPNAVIW 420

Query: 421 GALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRYIHLASILAAEGKWKEAAEVRLKMKNL 480
           GA LKAC IH +FL+GSQIGAHLVEVDSDHSGRYI LA+ILAA+GKWKEAAEVRLKMKNL
Sbjct: 421 GAFLKACWIHRDFLVGSQIGAHLVEVDSDHSGRYIQLATILAAQGKWKEAAEVRLKMKNL 480

Query: 481 RIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIHQKLNQVAERLQQEEGYVPKTKDLLLD 540
            +PI PGKS ITLNG+VHEFLAGHQDHPQ+EQIH KL Q+AERL+Q+EGY P TKDLLLD
Sbjct: 481 GVPISPGKSSITLNGIVHEFLAGHQDHPQMEQIHLKLKQIAERLRQDEGYEPATKDLLLD 540

Query: 541 LESEEKETAMAQHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCHTVAKLVSQIYGREII 600
           LE+EEKETA+AQHSEKLAIAFGLINTKPGTTIRVVKNLR+C DCHTVAKLVSQIY REII
Sbjct: 541 LENEEKETAIAQHSEKLAIAFGLINTKPGTTIRVVKNLRICRDCHTVAKLVSQIYCREII 600

Query: 601 MRDRVRFHHFRDGSCSCRDYW 622
           MRDRVRFHHFRDGSCSC+DYW
Sbjct: 601 MRDRVRFHHFRDGSCSCKDYW 617

BLAST of Lcy04g017630 vs. ExPASy TrEMBL
Match: A0A1S3B1S8 (pentatricopeptide repeat-containing protein At5g66520 OS=Cucumis melo OX=3656 GN=LOC103485057 PE=3 SV=1)

HSP 1 Score: 1083.9 bits (2802), Expect = 0.0e+00
Identity = 525/621 (84.54%), Postives = 571/621 (91.95%), Query Frame = 0

Query: 1   MITLTAQSPLESTWAQTISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPH 60
           M TL A+SPL+STW    +LLENCSNMKQLKQI AQMIKT  +++P+LATK LTLCTSPH
Sbjct: 1   MFTLKAESPLQSTW----TLLENCSNMKQLKQIQAQMIKTAILSEPKLATKFLTLCTSPH 60

Query: 61  FGDLHYAQKIFNGITSPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL 120
            GDL YAQ++FNGITSP T MWNAIIRAYSNS EPELAFLLY+QMLSSSVPHNSYTFPFL
Sbjct: 61  VGDLLYAQRVFNGITSPNTVMWNAIIRAYSNSKEPELAFLLYQQMLSSSVPHNSYTFPFL 120

Query: 121 LKACRNFSAMGEALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERDV 180
           LKACRN SA+GEALQVHGL++KLGFGSDVFALN+LLHVYALCG+I+YARQ+FDNIPERD 
Sbjct: 121 LKACRNLSALGEALQVHGLVIKLGFGSDVFALNALLHVYALCGEIRYARQMFDNIPERDA 180

Query: 181 VSWNTMIDGYIKFGDVETAYGVFLDMPMKNLVSWTSMISGLVEAGLNVVALNLCYEMQMA 240
           VSWN MIDGYIK GDV+TAYG+FLDMP KN+VSWTS+ISGLV AGL+V AL+LCYEMQ A
Sbjct: 181 VSWNIMIDGYIKSGDVKTAYGIFLDMPSKNVVSWTSLISGLVGAGLSVKALSLCYEMQNA 240

Query: 241 GFELDGIVIASSLTACANLGALDQGRWLHFYVLNNGVHIDKVIGCALVNMYLKCGDMEEA 300
           GFELDG+ IA  LTACANLGALDQGRWLHFYVLNNGV +D+VIGCALVNMY+KCGDMEEA
Sbjct: 241 GFELDGVAIACLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEA 300

Query: 301 LRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGIRPNSITFTAILTACS 360
           LRVFGKLKGDQKDV +WTAMIDGFAIHGRGVEALEWFD M +EGIRPNSITFTA+L ACS
Sbjct: 301 LRVFGKLKGDQKDVCIWTAMIDGFAIHGRGVEALEWFDLMRREGIRPNSITFTAVLRACS 360

Query: 361 YAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKKMPMKPNAVIW 420
           Y GLVEEGK LF+SMK LYNLSPSIEHYGCMVDLLGR+G L EAKELIK MPMKPNAVIW
Sbjct: 361 YGGLVEEGKELFKSMKCLYNLSPSIEHYGCMVDLLGRSGRLNEAKELIKNMPMKPNAVIW 420

Query: 421 GALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRYIHLASILAAEGKWKEAAEVRLKMKNL 480
           GA LKAC IH +FL+GSQIGAHLVEVDSDHSGRYI LA+ILAA+GKWKEAAEVRLKMKNL
Sbjct: 421 GAFLKACWIHRDFLVGSQIGAHLVEVDSDHSGRYIQLATILAAQGKWKEAAEVRLKMKNL 480

Query: 481 RIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIHQKLNQVAERLQQEEGYVPKTKDLLLD 540
            +PI PGKS ITLNG+VHEFLAGHQDHPQ+EQIH KL Q+AERL+Q+EGY P TKDLLLD
Sbjct: 481 GVPISPGKSSITLNGIVHEFLAGHQDHPQMEQIHLKLKQIAERLRQDEGYEPATKDLLLD 540

Query: 541 LESEEKETAMAQHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCHTVAKLVSQIYGREII 600
           LE+EEKETA+AQHSEKLAIAFGLINTKPGTTIRVVKNLR+C DCHTVAKLVSQIY REII
Sbjct: 541 LENEEKETAIAQHSEKLAIAFGLINTKPGTTIRVVKNLRICRDCHTVAKLVSQIYCREII 600

Query: 601 MRDRVRFHHFRDGSCSCRDYW 622
           MRDRVRFHHFRDGSCSC+DYW
Sbjct: 601 MRDRVRFHHFRDGSCSCKDYW 617

BLAST of Lcy04g017630 vs. ExPASy TrEMBL
Match: A0A0A0KKE0 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G502750 PE=3 SV=1)

HSP 1 Score: 1082.4 bits (2798), Expect = 0.0e+00
Identity = 523/621 (84.22%), Postives = 572/621 (92.11%), Query Frame = 0

Query: 1   MITLTAQSPLESTWAQTISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPH 60
           M TL A+SPL+STWA    LLENCSNMKQLKQI AQMIKT  I +P+LATK LTLCTSPH
Sbjct: 1   MFTLNAESPLQSTWA----LLENCSNMKQLKQIQAQMIKTAIITEPKLATKFLTLCTSPH 60

Query: 61  FGDLHYAQKIFNGITSPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL 120
            GDL YAQ++FNGITSP TFMWNAIIRAYSNS+EPELAFL Y+QMLSSSVPHNSYTFPFL
Sbjct: 61  VGDLLYAQRVFNGITSPNTFMWNAIIRAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFL 120

Query: 121 LKACRNFSAMGEALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERDV 180
           L+ACRN  AMGEALQVHGL++KLGFGSDVFALN+LLHVYALCG+I  ARQLFDNIPERD 
Sbjct: 121 LRACRNLLAMGEALQVHGLVIKLGFGSDVFALNALLHVYALCGEIHCARQLFDNIPERDA 180

Query: 181 VSWNTMIDGYIKFGDVETAYGVFLDMPMKNLVSWTSMISGLVEAGLNVVALNLCYEMQMA 240
           VSWN MIDGYIK GDV+TAYGVFLDMP+KN+VSWTS+ISGLVEAG +V AL+LCYEMQ A
Sbjct: 181 VSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNA 240

Query: 241 GFELDGIVIASSLTACANLGALDQGRWLHFYVLNNGVHIDKVIGCALVNMYLKCGDMEEA 300
           GFELDG+ IAS LTACANLGALDQGRWLHFYVLNNGV +D+VIGCALVNMY+KCGDMEEA
Sbjct: 241 GFELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEA 300

Query: 301 LRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGIRPNSITFTAILTACS 360
           L VFGKLKG+QKDVY+WTAMIDGFAIHGRGVEALEWF+RM +EGIRPNSITFTA+L ACS
Sbjct: 301 LSVFGKLKGNQKDVYIWTAMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACS 360

Query: 361 YAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKKMPMKPNAVIW 420
           Y GLVEEGK LF+SMK  YN++PSIEHYGCMVDLLGR+G L+EAKELIKKMPMKP+AVIW
Sbjct: 361 YGGLVEEGKELFKSMKCFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIW 420

Query: 421 GALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRYIHLASILAAEGKWKEAAEVRLKMKNL 480
           GALLKAC IH +FLLGSQ+GAHLVEVDSDHSGRYI LA+ILAAEGKWKEAAEVRLKMK+L
Sbjct: 421 GALLKACWIHRDFLLGSQVGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSL 480

Query: 481 RIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIHQKLNQVAERLQQEEGYVPKTKDLLLD 540
            +PI PGKS +TLNG+VHEFLAGHQDHPQ+EQI  KL Q+AERL+Q+EGY P TKDLLLD
Sbjct: 481 GVPISPGKSSVTLNGIVHEFLAGHQDHPQMEQIQLKLKQIAERLRQDEGYEPATKDLLLD 540

Query: 541 LESEEKETAMAQHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCHTVAKLVSQIYGREII 600
           LE+EEKETAMAQHSEKLAIAFGLINTKPGTTIRV+KNLR+C DCHTVAKLVSQIY REII
Sbjct: 541 LENEEKETAMAQHSEKLAIAFGLINTKPGTTIRVIKNLRICRDCHTVAKLVSQIYSREII 600

Query: 601 MRDRVRFHHFRDGSCSCRDYW 622
           MRDRVRFHHFRDGSCSC+DYW
Sbjct: 601 MRDRVRFHHFRDGSCSCKDYW 617

BLAST of Lcy04g017630 vs. NCBI nr
Match: XP_022949774.1 (pentatricopeptide repeat-containing protein At5g66520 [Cucurbita moschata])

HSP 1 Score: 1130.9 bits (2924), Expect = 0.0e+00
Identity = 545/621 (87.76%), Postives = 586/621 (94.36%), Query Frame = 0

Query: 1   MITLTAQSPLESTWAQTISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPH 60
           M  L A+SP++STWAQT+SLLENCSNMKQLK+IHAQMI+T T  +P+LATKLLTLC SPH
Sbjct: 1   MFALKAESPVQSTWAQTMSLLENCSNMKQLKEIHAQMIRTGTATEPKLATKLLTLCISPH 60

Query: 61  FGDLHYAQKIFNGITSPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL 120
           FGDLHYAQ++FNGI+SPTTFMWNA+IRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL
Sbjct: 61  FGDLHYAQRVFNGISSPTTFMWNAMIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL 120

Query: 121 LKACRNFSAMGEALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERDV 180
           LKACRNFSAM EALQVHGL++KLGFGSDVFALN+LLHVYALCGDIQYARQLFDNIPERD+
Sbjct: 121 LKACRNFSAMSEALQVHGLVIKLGFGSDVFALNALLHVYALCGDIQYARQLFDNIPERDI 180

Query: 181 VSWNTMIDGYIKFGDVETAYGVFLDMPMKNLVSWTSMISGLVEAGLNVVALNLCYEMQMA 240
           VSWN MIDGYIK GDV+TAYGVFLDMP+KN+VSWTS+ISGLVEAGLNV AL+LC+EMQ A
Sbjct: 181 VSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGLNVEALSLCHEMQNA 240

Query: 241 GFELDGIVIASSLTACANLGALDQGRWLHFYVLNNGVHIDKVIGCALVNMYLKCGDMEEA 300
           GFELDG+ IAS LTACANLGALDQGRWLHFYVLNNGVH+D+VIGCALVNMYLKCGDMEEA
Sbjct: 241 GFELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVHVDRVIGCALVNMYLKCGDMEEA 300

Query: 301 LRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGIRPNSITFTAILTACS 360
           LR FGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWF RM++EGIRPNSITFTA+L ACS
Sbjct: 301 LREFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFKRMLREGIRPNSITFTAVLRACS 360

Query: 361 YAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKKMPMKPNAVIW 420
           YAGLVEEGKVLF SM S+YNLSPSIEHYGCMVDLLGRAGLLEEAKELIK MPM+PNA+IW
Sbjct: 361 YAGLVEEGKVLFESMMSVYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKTMPMEPNAIIW 420

Query: 421 GALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRYIHLASILAAEGKWKEAAEVRLKMKNL 480
           GALLKACRIH +FL+G QIGAHLVEVDSDHSGRYI LA+ILAAEGKWKEAAEVRLKMKNL
Sbjct: 421 GALLKACRIHRDFLVGGQIGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNL 480

Query: 481 RIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIHQKLNQVAERLQQEEGYVPKTKDLLLD 540
           R+PIPPGKS ITLNGVVHEFLAGHQDHPQ+EQI  KLNQV ERL+Q EGY P TKDLLLD
Sbjct: 481 RLPIPPGKSSITLNGVVHEFLAGHQDHPQMEQILHKLNQVVERLRQHEGYEPATKDLLLD 540

Query: 541 LESEEKETAMAQHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCHTVAKLVSQIYGREII 600
           LESE KETA+AQHSEKLAIAFGLINTKPG+TIRVVKNLRVCEDCH VAKL+SQIY REII
Sbjct: 541 LESEAKETAVAQHSEKLAIAFGLINTKPGSTIRVVKNLRVCEDCHVVAKLISQIYRREII 600

Query: 601 MRDRVRFHHFRDGSCSCRDYW 622
           MRDRVRFHHFR G+CSC DYW
Sbjct: 601 MRDRVRFHHFRGGNCSCNDYW 621

BLAST of Lcy04g017630 vs. NCBI nr
Match: XP_022978438.1 (pentatricopeptide repeat-containing protein At5g66520 [Cucurbita maxima])

HSP 1 Score: 1129.8 bits (2921), Expect = 0.0e+00
Identity = 544/621 (87.60%), Postives = 587/621 (94.52%), Query Frame = 0

Query: 1   MITLTAQSPLESTWAQTISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPH 60
           M  L A+SP++STWAQT+SLLENCSNMKQLK+IHAQMI+T T  +P+LATKLLTLCTSPH
Sbjct: 1   MFALKAESPMQSTWAQTMSLLENCSNMKQLKEIHAQMIRTGTATEPKLATKLLTLCTSPH 60

Query: 61  FGDLHYAQKIFNGITSPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL 120
           FGDLHYAQ++FNGI+SPTTFMWNA+IRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL
Sbjct: 61  FGDLHYAQRVFNGISSPTTFMWNAMIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL 120

Query: 121 LKACRNFSAMGEALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERDV 180
           LKACRNFSAM EALQVHGL++KLGFGSDVFALN+LLHVYALCGDIQYARQLFDNIPERD+
Sbjct: 121 LKACRNFSAMSEALQVHGLVIKLGFGSDVFALNALLHVYALCGDIQYARQLFDNIPERDI 180

Query: 181 VSWNTMIDGYIKFGDVETAYGVFLDMPMKNLVSWTSMISGLVEAGLNVVALNLCYEMQMA 240
           VSWN MIDGYIK GDV+TAYGVFLDMP+KN+VSWTS+ISGLVEAGLNV AL+LC+EMQ A
Sbjct: 181 VSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGLNVEALSLCHEMQNA 240

Query: 241 GFELDGIVIASSLTACANLGALDQGRWLHFYVLNNGVHIDKVIGCALVNMYLKCGDMEEA 300
           GFELDG+ IAS LTACANLGALDQGRWLHFYVLNNGVH+D+VIGCALVNMYLKCGDMEEA
Sbjct: 241 GFELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVHVDRVIGCALVNMYLKCGDMEEA 300

Query: 301 LRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGIRPNSITFTAILTACS 360
           L+ FGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWF RM++EGIRPNSITFTA+L ACS
Sbjct: 301 LQEFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFKRMLREGIRPNSITFTAVLRACS 360

Query: 361 YAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKKMPMKPNAVIW 420
           YAGLVEEGKVLF SM S+Y LSPSIEHYGCMVDLLGRAGLLEEAKELIK MPMKPNA+IW
Sbjct: 361 YAGLVEEGKVLFESMMSVYILSPSIEHYGCMVDLLGRAGLLEEAKELIKTMPMKPNAIIW 420

Query: 421 GALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRYIHLASILAAEGKWKEAAEVRLKMKNL 480
           GALLKACRIH +FL+G QIGAHLVEVDSDHSGRYI LA+ILAAEGKWKEAAEVRLKMKNL
Sbjct: 421 GALLKACRIHRDFLVGGQIGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNL 480

Query: 481 RIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIHQKLNQVAERLQQEEGYVPKTKDLLLD 540
           R+PIPPGKS ITLNGVVHEFLAGHQDHPQ+EQI  KLNQV ERL+Q EGY P TKDLLLD
Sbjct: 481 RVPIPPGKSSITLNGVVHEFLAGHQDHPQMEQILHKLNQVVERLRQHEGYEPATKDLLLD 540

Query: 541 LESEEKETAMAQHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCHTVAKLVSQIYGREII 600
           LE+E KETA+AQHSEKLAIAFGLINTKPG+TIRVVKNLRVCEDCH VAKL+S+IY REII
Sbjct: 541 LENEAKETAVAQHSEKLAIAFGLINTKPGSTIRVVKNLRVCEDCHVVAKLISRIYRREII 600

Query: 601 MRDRVRFHHFRDGSCSCRDYW 622
           MRDRVRFHHFR GSCSC+DYW
Sbjct: 601 MRDRVRFHHFRGGSCSCKDYW 621

BLAST of Lcy04g017630 vs. NCBI nr
Match: KAG6603968.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1127.9 bits (2916), Expect = 0.0e+00
Identity = 544/621 (87.60%), Postives = 585/621 (94.20%), Query Frame = 0

Query: 1   MITLTAQSPLESTWAQTISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPH 60
           M  L A+SP++STWAQT+SLLENCSNMKQLK+IHAQMI+T T  +P+LATKLLTLC SPH
Sbjct: 1   MFALKAESPVQSTWAQTMSLLENCSNMKQLKEIHAQMIRTGTATEPKLATKLLTLCISPH 60

Query: 61  FGDLHYAQKIFNGITSPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL 120
           FGDLHYAQ++FNGI+SPTTFMWNA+IRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL
Sbjct: 61  FGDLHYAQRVFNGISSPTTFMWNAMIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL 120

Query: 121 LKACRNFSAMGEALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERDV 180
           LKACRNFSAM EALQVHGL++KLGFGSDVFALN+LLHVYALCGDIQYARQLFDNIPERD+
Sbjct: 121 LKACRNFSAMSEALQVHGLVIKLGFGSDVFALNALLHVYALCGDIQYARQLFDNIPERDI 180

Query: 181 VSWNTMIDGYIKFGDVETAYGVFLDMPMKNLVSWTSMISGLVEAGLNVVALNLCYEMQMA 240
           VSWN MIDGYIK GDV+TAYGVFLDMP+KN+VSWTS+ISGLVEAGLNV AL+LC+EMQ A
Sbjct: 181 VSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGLNVEALSLCHEMQNA 240

Query: 241 GFELDGIVIASSLTACANLGALDQGRWLHFYVLNNGVHIDKVIGCALVNMYLKCGDMEEA 300
           G ELDG+ IAS LTACANLGALDQGRWLHFYVLNNGVH+D+VIGCALVNMYLKCGDMEEA
Sbjct: 241 GCELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVHVDRVIGCALVNMYLKCGDMEEA 300

Query: 301 LRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGIRPNSITFTAILTACS 360
           LR FGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWF RM++EGIRPNSITFTA+L ACS
Sbjct: 301 LREFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFKRMLREGIRPNSITFTAVLRACS 360

Query: 361 YAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKKMPMKPNAVIW 420
           YAGLVEEGKVLF SM S+YNLSPSIEHYGCMVDLLGRAGLLEEAKELIK MPM+PNA+IW
Sbjct: 361 YAGLVEEGKVLFESMMSVYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKTMPMEPNAIIW 420

Query: 421 GALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRYIHLASILAAEGKWKEAAEVRLKMKNL 480
           GALLKACRIH +FL+G QIGAHLVEVDSDHSGRYI LA+ILAAEGKWKEAAEVRLKMKNL
Sbjct: 421 GALLKACRIHRDFLVGGQIGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNL 480

Query: 481 RIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIHQKLNQVAERLQQEEGYVPKTKDLLLD 540
           R+PIPPGKS ITLNGVVHEFLAGHQDHPQ+EQI  KLNQV ERL+Q EGY P TKDLLLD
Sbjct: 481 RLPIPPGKSSITLNGVVHEFLAGHQDHPQMEQILHKLNQVVERLRQHEGYEPATKDLLLD 540

Query: 541 LESEEKETAMAQHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCHTVAKLVSQIYGREII 600
           LESE KETA+AQHSEKLAIAFGLINTKPG+TIRVVKNLRVCEDCH VAKL+SQIY REII
Sbjct: 541 LESEAKETAVAQHSEKLAIAFGLINTKPGSTIRVVKNLRVCEDCHVVAKLISQIYRREII 600

Query: 601 MRDRVRFHHFRDGSCSCRDYW 622
           MRDRVRFHHFR G+CSC DYW
Sbjct: 601 MRDRVRFHHFRGGNCSCNDYW 621

BLAST of Lcy04g017630 vs. NCBI nr
Match: XP_023543056.1 (pentatricopeptide repeat-containing protein At5g66520 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1126.3 bits (2912), Expect = 0.0e+00
Identity = 541/621 (87.12%), Postives = 586/621 (94.36%), Query Frame = 0

Query: 1   MITLTAQSPLESTWAQTISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPH 60
           M  L A+SP++STWAQT+SLL+NCSNMKQLK+IHAQMI+T T  +P+LATKLLTLCTSPH
Sbjct: 1   MFALKAESPMQSTWAQTMSLLDNCSNMKQLKEIHAQMIRTGTATEPKLATKLLTLCTSPH 60

Query: 61  FGDLHYAQKIFNGITSPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL 120
            GDLHYAQ++FNGI+SPTTFMWNA+IRAYSNSNEPELAFLLYR+MLSSSVPHNSYTFPFL
Sbjct: 61  LGDLHYAQRVFNGISSPTTFMWNAMIRAYSNSNEPELAFLLYRRMLSSSVPHNSYTFPFL 120

Query: 121 LKACRNFSAMGEALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERDV 180
           LKACRNFSAM EALQVHGL++KLGFGSDVFALN+LLHVYALCGDIQYARQLFDNIPERD+
Sbjct: 121 LKACRNFSAMSEALQVHGLVIKLGFGSDVFALNALLHVYALCGDIQYARQLFDNIPERDI 180

Query: 181 VSWNTMIDGYIKFGDVETAYGVFLDMPMKNLVSWTSMISGLVEAGLNVVALNLCYEMQMA 240
           VSWN MIDGYIK GDV+TAYGVFLDMP+KN+VSWTS+ISGLVEAGLNV AL+LC+EMQ A
Sbjct: 181 VSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGLNVEALSLCHEMQNA 240

Query: 241 GFELDGIVIASSLTACANLGALDQGRWLHFYVLNNGVHIDKVIGCALVNMYLKCGDMEEA 300
           GFELDG+ IAS LTACANLGALDQGRWLHFYVLNNGVH+D+VIGCALVNMYLKCGDMEEA
Sbjct: 241 GFELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVHVDRVIGCALVNMYLKCGDMEEA 300

Query: 301 LRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGIRPNSITFTAILTACS 360
           LR FGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWF RM++EGIRPNSITFTA+L ACS
Sbjct: 301 LREFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFKRMLREGIRPNSITFTAVLRACS 360

Query: 361 YAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKKMPMKPNAVIW 420
           YAGLVEEGKVLF SM S+YNLSPSIEHYGCMVDLLGRAGLLEEAKELIK MPMKPNA+IW
Sbjct: 361 YAGLVEEGKVLFESMMSVYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKTMPMKPNAIIW 420

Query: 421 GALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRYIHLASILAAEGKWKEAAEVRLKMKNL 480
           GALLKACRIH +FL+G QIGAHLVEVDSDHSGRYI LA+ILAAEGKWKEAAEVRLKMKNL
Sbjct: 421 GALLKACRIHRDFLVGGQIGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKNL 480

Query: 481 RIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIHQKLNQVAERLQQEEGYVPKTKDLLLD 540
           R+PIPPGKS ITLNGVVH+FLAGHQDHPQ+EQI  KLNQV ERL+Q EGY P TKDLLLD
Sbjct: 481 RLPIPPGKSSITLNGVVHQFLAGHQDHPQMEQILHKLNQVVERLRQHEGYEPATKDLLLD 540

Query: 541 LESEEKETAMAQHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCHTVAKLVSQIYGREII 600
           LE+E KETA+AQHSEKLAIAFGLINTKPG+TIRVVKNLRVCEDCH VAKL+S+IY REII
Sbjct: 541 LENEAKETAVAQHSEKLAIAFGLINTKPGSTIRVVKNLRVCEDCHVVAKLISRIYRREII 600

Query: 601 MRDRVRFHHFRDGSCSCRDYW 622
           MRDRVRFHHFR G+CSC DYW
Sbjct: 601 MRDRVRFHHFRGGNCSCNDYW 621

BLAST of Lcy04g017630 vs. NCBI nr
Match: XP_038882528.1 (pentatricopeptide repeat-containing protein At5g66520 [Benincasa hispida])

HSP 1 Score: 1101.7 bits (2848), Expect = 0.0e+00
Identity = 535/621 (86.15%), Postives = 576/621 (92.75%), Query Frame = 0

Query: 1   MITLTAQSPLESTWAQTISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPH 60
           M TL A SPL+STWAQT+SLLENCSNMKQLK+IHAQMIKTET  +P+LATKLLTLCTSPH
Sbjct: 1   MFTLKADSPLQSTWAQTMSLLENCSNMKQLKEIHAQMIKTETATEPKLATKLLTLCTSPH 60

Query: 61  FGDLHYAQKIFNGITSPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFL 120
           FGDL YAQ++FNGIT P TFMWNAIIRAYSNS EPELAFLLY+QMLSSSVPHNSYTFPFL
Sbjct: 61  FGDLPYAQRVFNGITRPNTFMWNAIIRAYSNSKEPELAFLLYQQMLSSSVPHNSYTFPFL 120

Query: 121 LKACRNFSAMGEALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERDV 180
           LKACRN SAMGEALQ+HGL++KLGFGSDVFALN+LLHVYALCGDI YARQLFDNIP RDV
Sbjct: 121 LKACRNLSAMGEALQIHGLVIKLGFGSDVFALNALLHVYALCGDIYYARQLFDNIPVRDV 180

Query: 181 VSWNTMIDGYIKFGDVETAYGVFLDMPMKNLVSWTSMISGLVEAGLNVVALNLCYEMQMA 240
           VSWN MIDGYIK GDV+TAYGVFLDMP+KN+VSWTS+ISGLVEAG +V AL+LCYEMQ A
Sbjct: 181 VSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNA 240

Query: 241 GFELDGIVIASSLTACANLGALDQGRWLHFYVLNNGVHIDKVIGCALVNMYLKCGDMEEA 300
           GFELDGI IAS LTACANLGALDQGRWLHFYVLNNGV +D+VIGCALVNMYLKCGDMEEA
Sbjct: 241 GFELDGIAIASLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYLKCGDMEEA 300

Query: 301 LRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGIRPNSITFTAILTACS 360
           LRVFGKLK DQKDVYVWTAMIDGFAIHG GVEALEWF+RM +EGIRPNSITFTA+L ACS
Sbjct: 301 LRVFGKLKSDQKDVYVWTAMIDGFAIHGLGVEALEWFNRMQREGIRPNSITFTAVLRACS 360

Query: 361 YAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKKMPMKPNAVIW 420
           YAGLV EGK LF SM SLYNL PSIEHYGCMVDLLGRAGLL+EAKELIKKMPMKPNAVIW
Sbjct: 361 YAGLVGEGKELFESMTSLYNLIPSIEHYGCMVDLLGRAGLLDEAKELIKKMPMKPNAVIW 420

Query: 421 GALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRYIHLASILAAEGKWKEAAEVRLKMKNL 480
           GALLKAC IH +FL+GSQIGAHLVEVDSDHSGRYI LA+I AAEGKWKEAAEVRLKMKNL
Sbjct: 421 GALLKACWIHRDFLVGSQIGAHLVEVDSDHSGRYIQLATIFAAEGKWKEAAEVRLKMKNL 480

Query: 481 RIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIHQKLNQVAERLQQEEGYVPKTKDLLLD 540
            + IPPGKS IT+NGVVHEFLAG QDHPQ+E+IH KL Q+AERL+++EGY P TKDLLLD
Sbjct: 481 GVSIPPGKSSITVNGVVHEFLAGQQDHPQMEKIHLKLKQIAERLRRDEGYEPSTKDLLLD 540

Query: 541 LESEEKETAMAQHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCHTVAKLVSQIYGREII 600
           LE+EEKETAMAQHSEKLAIAFGLINTKPG TIRV+KNLRVCEDCH VAKL+SQIY R II
Sbjct: 541 LENEEKETAMAQHSEKLAIAFGLINTKPGMTIRVIKNLRVCEDCHVVAKLISQIYCRGII 600

Query: 601 MRDRVRFHHFRDGSCSCRDYW 622
           MRDRVRFHHFR+G+CSC+DYW
Sbjct: 601 MRDRVRFHHFRNGNCSCKDYW 621

BLAST of Lcy04g017630 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 698.4 bits (1801), Expect = 5.4e-201
Identity = 341/623 (54.74%), Postives = 447/623 (71.75%), Query Frame = 0

Query: 1   MITLTAQSPLESTWAQTISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPH 60
           M  ++    LE    +T+S L+ CS  ++LKQIHA+M+KT  + D    TK L+ C S  
Sbjct: 1   MNVISCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISST 60

Query: 61  FGD-LHYAQKIFNGITSPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPF 120
             D L YAQ +F+G   P TF+WN +IR +S S+EPE + LLY++ML SS PHN+YTFP 
Sbjct: 61  SSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPS 120

Query: 121 LLKACRNFSAMGEALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERD 180
           LLKAC N SA  E  Q+H  + KLG+ +DV+A+NSL++ YA+ G+ + A  LFD IPE D
Sbjct: 121 LLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPD 180

Query: 181 VVSWNTMIDGYIKFGDVETAYGVFLDMPMKNLVSWTSMISGLVEAGLNVVALNLCYEMQM 240
            VSWN++I GY+K G ++ A  +F  M  KN +SWT+MISG V+A +N  AL L +EMQ 
Sbjct: 181 DVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQN 240

Query: 241 AGFELDGIVIASSLTACANLGALDQGRWLHFYVLNNGVHIDKVIGCALVNMYLKCGDMEE 300
           +  E D + +A++L+ACA LGAL+QG+W+H Y+    + +D V+GC L++MY KCG+MEE
Sbjct: 241 SDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 300

Query: 301 ALRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGIRPNSITFTAILTAC 360
           AL VF  +K  +K V  WTA+I G+A HG G EA+  F  M K GI+PN ITFTA+LTAC
Sbjct: 301 ALEVFKNIK--KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTAC 360

Query: 361 SYAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKKMPMKPNAVI 420
           SY GLVEEGK++F SM+  YNL P+IEHYGC+VDLLGRAGLL+EAK  I++MP+KPNAVI
Sbjct: 361 SYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI 420

Query: 421 WGALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRYIHLASILAAEGKWKEAAEVRLKMKN 480
           WGALLKACRIH N  LG +IG  L+ +D  H GRY+H A+I A + KW +AAE R  MK 
Sbjct: 421 WGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKE 480

Query: 481 LRIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIHQKLNQVAERLQQEEGYVPKTKDLLL 540
             +   PG S I+L G  HEFLAG + HP+IE+I  K  ++  R  +E GYVP+ +++LL
Sbjct: 481 QGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKW-RIMRRKLEENGYVPELEEMLL 540

Query: 541 DL-ESEEKETAMAQHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCHTVAKLVSQIYGRE 600
           DL + +E+E  + QHSEKLAI +GLI TKPGT IR++KNLRVC+DCH V KL+S+IY R+
Sbjct: 541 DLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRD 600

Query: 601 IIMRDRVRFHHFRDGSCSCRDYW 622
           I+MRDR RFHHFRDG CSC DYW
Sbjct: 601 IVMRDRTRFHHFRDGKCSCGDYW 620

BLAST of Lcy04g017630 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 548.9 bits (1413), Expect = 5.2e-156
Identity = 282/636 (44.34%), Postives = 410/636 (64.47%), Query Frame = 0

Query: 8   SPLESTWAQTISL---LENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSP--HFG 67
           SP  S  +   SL   + NC  ++ L QIHA  IK+  + D   A ++L  C +   H  
Sbjct: 14  SPASSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR 73

Query: 68  DLHYAQKIFNGITSPTTFMWNAIIRAYSNSNEPE--LAFLLYRQMLSSS-VPHNSYTFPF 127
           DL YA KIFN +     F WN IIR +S S+E +  +A  L+ +M+S   V  N +TFP 
Sbjct: 74  DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133

Query: 128 LLKACRNFSAMGEALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLF-DNIPER 187
           +LKAC     + E  Q+HGL +K GFG D F +++L+ +Y +CG ++ AR LF  NI E+
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193

Query: 188 D-------------VVSWNTMIDGYIKFGDVETAYGVFLDMPMKNLVSWTSMISGLVEAG 247
           D             +V WN MIDGY++ GD + A  +F  M  +++VSW +MISG    G
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253

Query: 248 LNVVALNLCYEMQMAGFELDGIVIASSLTACANLGALDQGRWLHFYVLNNGVHIDKVIGC 307
               A+ +  EM+      + + + S L A + LG+L+ G WLH Y  ++G+ ID V+G 
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313

Query: 308 ALVNMYLKCGDMEEALRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGI 367
           AL++MY KCG +E+A+ VF +L   +++V  W+AMI+GFAIHG+  +A++ F +M + G+
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERL--PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV 373

Query: 368 RPNSITFTAILTACSYAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAK 427
           RP+ + +  +LTACS+ GLVEEG+  F  M S+  L P IEHYGCMVDLLGR+GLL+EA+
Sbjct: 374 RPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAE 433

Query: 428 ELIKKMPMKPNAVIWGALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRYIHLASILAAEG 487
           E I  MP+KP+ VIW ALL ACR+ GN  +G ++   L+++    SG Y+ L+++ A++G
Sbjct: 434 EFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQG 493

Query: 488 KWKEAAEVRLKMKNLRIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIHQKLNQVAERLQ 547
            W E +E+RL+MK   I   PG SLI ++GV+HEF+     HP+ ++I+  L +++++L+
Sbjct: 494 NWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLR 553

Query: 548 QEEGYVPKTKDLLLDLESEEKETAMAQHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCH 607
              GY P T  +LL+LE E+KE  +  HSEK+A AFGLI+T PG  IR+VKNLR+CEDCH
Sbjct: 554 L-AGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCH 613

Query: 608 TVAKLVSQIYGREIIMRDRVRFHHFRDGSCSCRDYW 622
           +  KL+S++Y R+I +RDR RFHHF+DGSCSC DYW
Sbjct: 614 SSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646

BLAST of Lcy04g017630 vs. TAIR 10
Match: AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 526.2 bits (1354), Expect = 3.6e-149
Identity = 264/610 (43.28%), Postives = 400/610 (65.57%), Query Frame = 0

Query: 18  ISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPHFGD-----LHYAQKIFN 77
           ++LL++CS+   LK IH  +++T  I+D  +A++LL LC      +     L YA  IF+
Sbjct: 16  LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75

Query: 78  GITSPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFLLKACRNFSAMGE 137
            I +P  F++N +IR +S   EP  AF  Y QML S +  ++ TFPFL+KA      +  
Sbjct: 76  QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135

Query: 138 ALQVHGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERDVVSWNTMIDGYIK 197
             Q H  +++ GF +DV+  NSL+H+YA CG I  A ++F  +  RDVVSW +M+ GY K
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195

Query: 198 FGDVETAYGVFLDMPMKNLVSWTSMISGLVEAGLNVVALNLCYEMQMAGFELDGIVIASS 257
            G VE A  +F +MP +NL +W+ MI+G  +      A++L   M+  G   +  V+ S 
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255

Query: 258 LTACANLGALDQGRWLHFYVLNNGVHIDKVIGCALVNMYLKCGDMEEALRVFGKLKGDQK 317
           +++CA+LGAL+ G   + YV+ + + ++ ++G ALV+M+ +CGD+E+A+ VF  L   + 
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL--PET 315

Query: 318 DVYVWTAMIDGFAIHGRGVEALEWFDRMVKEGIRPNSITFTAILTACSYAGLVEEGKVLF 377
           D   W+++I G A+HG   +A+ +F +M+  G  P  +TFTA+L+ACS+ GLVE+G  ++
Sbjct: 316 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 375

Query: 378 RSMKSLYNLSPSIEHYGCMVDLLGRAGLLEEAKELIKKMPMKPNAVIWGALLKACRIHGN 437
            +MK  + + P +EHYGC+VD+LGRAG L EA+  I KM +KPNA I GALL AC+I+ N
Sbjct: 376 ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKN 435

Query: 438 FLLGSQIGAHLVEVDSDHSGRYIHLASILAAEGKWKEAAEVRLKMKNLRIPIPPGKSLIT 497
             +  ++G  L++V  +HSG Y+ L++I A  G+W +   +R  MK   +  PPG SLI 
Sbjct: 436 TEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 495

Query: 498 LNGVVHEFLAG-HQDHPQIEQIHQKLNQVAERLQQEEGYVPKTKDLLLDLESEEKETAMA 557
           ++G +++F  G  Q HP++ +I +K  ++  +++   GY   T D   D++ EEKE+++ 
Sbjct: 496 IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRL-IGYKGNTGDAFFDVDEEEKESSIH 555

Query: 558 QHSEKLAIAFGLINTKPGTTIRVVKNLRVCEDCHTVAKLVSQIYGREIIMRDRVRFHHFR 617
            HSEKLAIA+G++ TKPGTTIR+VKNLRVCEDCHTV KL+S++YGRE+I+RDR RFHHFR
Sbjct: 556 MHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFR 615

Query: 618 DGSCSCRDYW 622
           +G CSCRDYW
Sbjct: 616 NGVCSCRDYW 622

BLAST of Lcy04g017630 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 520.4 bits (1339), Expect = 2.0e-147
Identity = 271/708 (38.28%), Postives = 407/708 (57.49%), Query Frame = 0

Query: 18  ISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLCTSPHFGDLHYAQKIFNGITSP 77
           ISL+E C +++QLKQ H  MI+T T +DP  A+KL  +     F  L YA+K+F+ I  P
Sbjct: 34  ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93

Query: 78  TTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPH-NSYTFPFLLKACRNFSAMGEALQV 137
            +F WN +IRAY++  +P L+   +  M+S S  + N YTFPFL+KA    S++     +
Sbjct: 94  NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153

Query: 138 HGLMMKLGFGSDVFALNSLLHVYALCGDIQYARQLFDNIPERDVVSWNTMIDGYIKFG-- 197
           HG+ +K   GSDVF  NSL+H Y  CGD+  A ++F  I E+DVVSWN+MI+G+++ G  
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213

Query: 198 ------------------------------------------------------------ 257
                                                                       
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273

Query: 258 ---------------------------------------DVETAYGVFLDMPMKNLVSWT 317
                                                  D E A  V   MP K++V+W 
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333

Query: 318 SMISGLVEAGLNVVALNLCYEMQM-AGFELDGIVIASSLTACANLGALDQGRWLHFYVLN 377
           ++IS   + G    AL + +E+Q+    +L+ I + S+L+ACA +GAL+ GRW+H Y+  
Sbjct: 334 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393

Query: 378 NGVHIDKVIGCALVNMYLKCGDMEEALRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVEAL 437
           +G+ ++  +  AL++MY KCGD+E++  VF  +  +++DV+VW+AMI G A+HG G EA+
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV--EKRDVFVWSAMIGGLAMHGCGNEAV 453

Query: 438 EWFDRMVKEGIRPNSITFTAILTACSYAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMVDL 497
           + F +M +  ++PN +TFT +  ACS+ GLV+E + LF  M+S Y + P  +HY C+VD+
Sbjct: 454 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 513

Query: 498 LGRAGLLEEAKELIKKMPMKPNAVIWGALLKACRIHGNFLLGSQIGAHLVEVDSDHSGRY 557
           LGR+G LE+A + I+ MP+ P+  +WGALL AC+IH N  L       L+E++  + G +
Sbjct: 514 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAH 573

Query: 558 IHLASILAAEGKWKEAAEVRLKMKNLRIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQIH 617
           + L++I A  GKW+  +E+R  M+   +   PG S I ++G++HEFL+G   HP  E+++
Sbjct: 574 VLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVY 633

Query: 618 QKLNQVAERLQQEEGYVPKTKDLLLDLESEE-KETAMAQHSEKLAIAFGLINTKPGTTIR 622
            KL++V E+L +  GY P+   +L  +E EE KE ++  HSEKLAI +GLI+T+    IR
Sbjct: 634 GKLHEVMEKL-KSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIR 693

BLAST of Lcy04g017630 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 509.2 bits (1310), Expect = 4.6e-144
Identity = 277/709 (39.07%), Postives = 398/709 (56.14%), Query Frame = 0

Query: 17  TISLLENCSNMKQLKQIHAQMIKTETIADPQLATKLLTLC-TSPHFGDLHYAQKIFNGIT 76
           ++SLL NC  ++ L+ IHAQMIK          +KL+  C  SPHF  L YA  +F  I 
Sbjct: 36  SLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95

Query: 77  SPTTFMWNAIIRAYSNSNEPELAFLLYRQMLSSSVPHNSYTFPFLLKACRNFSAMGEALQ 136
            P   +WN + R ++ S++P  A  LY  M+S  +  NSYTFPF+LK+C    A  E  Q
Sbjct: 96  EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155

Query: 137 VHGLMMKLGFGSDVFALNSLLHV-------------------------------YALCGD 196
           +HG ++KLG   D++   SL+ +                               YA  G 
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215

Query: 197 IQYARQLFDNIPERDVVSWNTMIDGYI--------------------------------- 256
           I+ A++LFD IP +DVVSWN MI GY                                  
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275

Query: 257 -------------------------------------KFGDVETAYGVFLDMPMKNLVSW 316
                                                K G++ETA G+F  +P K+++SW
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335

Query: 317 TSMISGLVEAGLNVVALNLCYEMQMAGFELDGIVIASSLTACANLGALDQGRWLHFYVLN 376
            ++I G     L   AL L  EM  +G   + + + S L ACA+LGA+D GRW+H Y+  
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395

Query: 377 --NGVHIDKVIGCALVNMYLKCGDMEEALRVFGKLKGDQKDVYVWTAMIDGFAIHGRGVE 436
              GV     +  +L++MY KCGD+E A +VF  +    K +  W AMI GFA+HGR   
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL--HKSLSSWNAMIFGFAMHGRADA 455

Query: 437 ALEWFDRMVKEGIRPNSITFTAILTACSYAGLVEEGKVLFRSMKSLYNLSPSIEHYGCMV 496
           + + F RM K GI+P+ ITF  +L+ACS++G+++ G+ +FR+M   Y ++P +EHYGCM+
Sbjct: 456 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 515

Query: 497 DLLGRAGLLEEAKELIKKMPMKPNAVIWGALLKACRIHGNFLLGSQIGAHLVEVDSDHSG 556
           DLLG +GL +EA+E+I  M M+P+ VIW +LLKAC++HGN  LG     +L++++ ++ G
Sbjct: 516 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG 575

Query: 557 RYIHLASILAAEGKWKEAAEVRLKMKNLRIPIPPGKSLITLNGVVHEFLAGHQDHPQIEQ 616
            Y+ L++I A+ G+W E A+ R  + +  +   PG S I ++ VVHEF+ G + HP+  +
Sbjct: 576 SYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 635

Query: 617 IHQKLNQVAERLQQEEGYVPKTKDLLLDLESEEKETAMAQHSEKLAIAFGLINTKPGTTI 622
           I+  L ++ E L ++ G+VP T ++L ++E E KE A+  HSEKLAIAFGLI+TKPGT +
Sbjct: 636 IYGMLEEM-EVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKL 695

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FJY77.5e-20054.74Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
Q9FI807.4e-15544.34Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
Q9FG165.1e-14843.28Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... [more]
O823802.8e-14638.28Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9LN016.5e-14339.07Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1GDX20.0e+0087.76pentatricopeptide repeat-containing protein At5g66520 OS=Cucurbita moschata OX=3... [more]
A0A6J1IT430.0e+0087.60pentatricopeptide repeat-containing protein At5g66520 OS=Cucurbita maxima OX=366... [more]
A0A5D3CKZ80.0e+0084.54Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B1S80.0e+0084.54pentatricopeptide repeat-containing protein At5g66520 OS=Cucumis melo OX=3656 GN... [more]
A0A0A0KKE00.0e+0084.22DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G5027... [more]
Match NameE-valueIdentityDescription
XP_022949774.10.0e+0087.76pentatricopeptide repeat-containing protein At5g66520 [Cucurbita moschata][more]
XP_022978438.10.0e+0087.60pentatricopeptide repeat-containing protein At5g66520 [Cucurbita maxima][more]
KAG6603968.10.0e+0087.60Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_023543056.10.0e+0087.12pentatricopeptide repeat-containing protein At5g66520 [Cucurbita pepo subsp. pep... [more]
XP_038882528.10.0e+0086.15pentatricopeptide repeat-containing protein At5g66520 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
AT5G66520.15.4e-20154.74Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G48910.15.2e-15644.34Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G06540.13.6e-14943.28Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G29760.12.0e-14738.28Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G08070.14.6e-14439.07Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 507..527
NoneNo IPR availablePANTHERPTHR47928:SF136PPR CONTAINING PLANT-LIKE PROTEINcoord: 15..595
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 15..595
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 312..359
e-value: 2.9E-12
score: 46.6
coord: 77..124
e-value: 1.4E-9
score: 38.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 212..242
e-value: 0.0012
score: 18.9
coord: 286..309
e-value: 0.0039
score: 17.3
coord: 181..210
e-value: 5.5E-7
score: 29.4
coord: 387..412
e-value: 3.8E-4
score: 20.5
coord: 152..179
e-value: 0.31
score: 11.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 181..210
e-value: 1.2E-5
score: 23.2
coord: 315..348
e-value: 2.4E-8
score: 31.7
coord: 81..111
e-value: 2.1E-5
score: 22.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 179..213
score: 10.939435
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 78..112
score: 9.580234
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 313..347
score: 12.386327
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 486..611
e-value: 3.8E-38
score: 130.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 96..229
e-value: 3.0E-30
score: 107.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 366..527
e-value: 3.2E-15
score: 57.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 253..365
e-value: 5.3E-25
score: 89.8

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy04g017630.1Lcy04g017630.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1900865 chloroplast RNA modification
biological_process GO:0016554 cytidine to uridine editing
cellular_component GO:0009507 chloroplast
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding