Lcy04g017070 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAAGCCCACAGAAAGAATTCTGATAATAATTTCCATTTGTTGATCTGTTCCGTAAAAACCATGTCGTCCATGGGAGCTAGCTGCGCTAGGGTTTATGTTATGAAAAAGAAGGCCGAGGAGAAACTTCAGAGGATGGAGCAGGAGAGAGCTGGCAGAAGGGAAGACTCGGTCAAACCTCCAAAAACCGCCCATCACGGCGCCGCCGTTGCCGGAAAAACCAGTAAAAAAGTCCATCCCGGTACCATATTTGGGGTTCCGGCGAGCTCTAATTCGTGAAACAGGGCTCTCTGGCTTTCACTTTCTGAATTGAAAATCCAAGCCAGAGTCGCAGTCTTTATTAGCTTTTTTTTTTTTTTTTTGGTTTTTTTTTTTTAAACT GAAAAAGCCCACAGAAAGAATTCTGATAATAATTTCCATTTGTTGATCTGTTCCGTAAAAACCATGTCGTCCATGGGAGCTAGCTGCGCTAGGGTTTATGTTATGAAAAAGAAGGCCGAGGAGAAACTTCAGAGGATGGAGCAGGAGAGAGCTGGCAGAAGGGAAGACTCGGTCAAACCTCCAAAAACCGCCCATCACGGCGCCGCCGTTGCCGGAAAAACCAGTAAAAAAGTCCATCCCGGTACCATATTTGGGGTTCCGGCGAGCTCTAATTCGTGAAACAGGGCTCTCTGGCTTTCACTTTCTGAATTGAAAATCCAAGCCAGAGTCGCAGTCTTTATTAGCTTTTTTTTTTTTTTTTTGGTTTTTTTTTTTTAAACT ATGTCGTCCATGGGAGCTAGCTGCGCTAGGGTTTATGTTATGAAAAAGAAGGCCGAGGAGAAACTTCAGAGGATGGAGCAGGAGAGAGCTGGCAGAAGGGAAGACTCGGTCAAACCTCCAAAAACCGCCCATCACGGCGCCGCCGTTGCCGGAAAAACCAGTAAAAAAGTCCATCCCGGTACCATATTTGGGGTTCCGGCGAGCTCTAATTCGTGA MSSMGASCARVYVMKKKAEEKLQRMEQERAGRREDSVKPPKTAHHGAAVAGKTSKKVHPGTIFGVPASSNS Homology
BLAST of Lcy04g017070 vs. ExPASy TrEMBL
Match: A0A0A0KGB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500720 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 3.0e-23 Identity = 61/72 (84.72%), Postives = 68/72 (94.44%), Query Frame = 0
BLAST of Lcy04g017070 vs. ExPASy TrEMBL
Match: A0A5A7T065 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002550 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.0e-23 Identity = 63/74 (85.14%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of Lcy04g017070 vs. ExPASy TrEMBL
Match: A0A2N9EUS9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6201 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.4e-04 Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 0
BLAST of Lcy04g017070 vs. ExPASy TrEMBL
Match: A0A2P5CW36 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_117820 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 9.2e-04 Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 0
BLAST of Lcy04g017070 vs. ExPASy TrEMBL
Match: A0A2P5BZF9 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_303210 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 9.2e-04 Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 0
BLAST of Lcy04g017070 vs. NCBI nr
Match: KGN48780.1 (hypothetical protein Csa_002943 [Cucumis sativus]) HSP 1 Score: 117.1 bits (292), Expect = 6.3e-23 Identity = 61/72 (84.72%), Postives = 68/72 (94.44%), Query Frame = 0
BLAST of Lcy04g017070 vs. NCBI nr
Match: KAA0036273.1 (hypothetical protein E6C27_scaffold18G00720 [Cucumis melo var. makuwa] >TYK12667.1 hypothetical protein E5676_scaffold255G002550 [Cucumis melo var. makuwa]) HSP 1 Score: 116.7 bits (291), Expect = 8.2e-23 Identity = 63/74 (85.14%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of Lcy04g017070 vs. NCBI nr
Match: KAG6594855.1 (hypothetical protein SDJN03_11408, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 108.2 bits (269), Expect = 2.9e-20 Identity = 57/71 (80.28%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of Lcy04g017070 vs. NCBI nr
Match: KAG6604014.1 (hypothetical protein SDJN03_04623, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 104.0 bits (258), Expect = 5.5e-19 Identity = 54/73 (73.97%), Postives = 62/73 (84.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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