Homology
BLAST of Lcy04g016660 vs. ExPASy Swiss-Prot
Match:
Q3E9N1 (Pentatricopeptide repeat-containing protein At4g39952, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E98 PE=2 SV=2)
HSP 1 Score: 756.5 bits (1952), Expect = 2.7e-217
Identity = 373/712 (52.39%), Postives = 501/712 (70.37%), Query Frame = 0
Query: 1 MSFYASHRQPAFSTQLFRSIHPKDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQ 60
+S YAS+ +P S+++F + +D FLWNSII++HFSNGDY ++ F+ M S P+
Sbjct: 66 ISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDH 125
Query: 61 FTAPMVVSTCAELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLFD 120
FTAPMVVS CAEL+ + G +HGL LK G F N+AVG+S VY YSKCG + A L+FD
Sbjct: 126 FTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFD 185
Query: 121 EITVKDVVAWTALIVGHVQNNESEKGLKCLHQMHRNG---ETPNYRTLGGGFQACVDMDA 180
E+ +DVVAWTA+I GHVQN ESE GL L +MH G + PN RTL GFQAC ++ A
Sbjct: 186 EMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGA 245
Query: 181 LVEGRCLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSIISV 240
L EGRCLHG A+K+G+ + V+SS+ S YS+ G+P EAY F +L +D+ SWTSII+
Sbjct: 246 LKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIAS 305
Query: 241 HAKFGLMTECLHLFWEMLAGEIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQCCAVS 300
A+ G M E +FWEM + PD + ISC++ G + +GKAFHG+++R C ++
Sbjct: 306 LARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLD 365
Query: 301 QITTQNALLSMYCKFGLLSTAEKIF--HSFRKSSEDWNTMILGYSNMGQKEKCIDFFREM 360
T N+LLSMYCKF LLS AEK+F S + E WNTM+ GY M KCI+ FR++
Sbjct: 366 S-TVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKI 425
Query: 361 QLLGIEPDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKIGNL 420
Q LGIE D S SVISSCS +GAV +G+S+HCY +K S+ +S+ NSL+D+YGK+G+L
Sbjct: 426 QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDL 485
Query: 421 ATAWRIFHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVLSAC 480
AWR+F +VI+WN +I+SY +AI LFD+MV ENF P+ +T V +L AC
Sbjct: 486 TVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMAC 545
Query: 481 AHLASLDKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVILWN 540
+ SL++G+ IH+YI E+ E ++++ ALIDMYAKCG L+ SR+LF++ ++D + WN
Sbjct: 546 VNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWN 605
Query: 541 VMISNYGMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEGRYLFDRMQKY 600
VMIS YGMHGDVESAI +F MEES+VKP TFL+LLSAC H G V +G+ LF +M +Y
Sbjct: 606 VMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQY 665
Query: 601 GVKPSLKHYASMVDLLGRSGSLQEAETLVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRI 660
VKP+LKHY+ +VDLL RSG+L+EAE+ V+SMP +PDG +WG+LLS+C H EFEMG+R+
Sbjct: 666 DVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRM 725
Query: 661 ARHAIESDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWSAL 708
A A+ SDP+NDGYYI L+++Y G+WEE E+ R MM+E GV K AG S +
Sbjct: 726 AERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
BLAST of Lcy04g016660 vs. ExPASy Swiss-Prot
Match:
Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)
HSP 1 Score: 443.4 bits (1139), Expect = 5.0e-123
Identity = 234/705 (33.19%), Postives = 412/705 (58.44%), Query Frame = 0
Query: 4 YASHRQPAFSTQLFRSIHP-KDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQFT 63
Y+ R+PA S +FR + P K+ +LWNSII++ NG + +A +FY ++R S P+++T
Sbjct: 49 YSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYT 108
Query: 64 APMVVSTCAELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLFDEI 123
P V+ CA L G ++ L +G F + VG++LV MYS+ G A +FDE+
Sbjct: 109 FPSVIKACAGLFDAEMGDLVYEQILDMG-FESDLFVGNALVDMYSRMGLLTRARQVFDEM 168
Query: 124 TVKDVVAWTALIVGHVQNNESEKGLKCLHQMHRNGETPNYRTLGGGFQACVDMDALVEGR 183
V+D+V+W +LI G+ + E+ L+ H++ + P+ T+ A ++ + +G+
Sbjct: 169 PVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 228
Query: 184 CLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSIISVHAKFG 243
LHG ALKSG+ VV + +++MY + P +A F +++ +D +S+ ++I + K
Sbjct: 229 GLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLE 288
Query: 244 LMTECLHLFWEMLAGEIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQCCAVSQITTQ 303
++ E + +F E L + PD + +S +L G+ +S K + ++L+ V + T +
Sbjct: 289 MVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK-AGFVLESTVR 348
Query: 304 NALLSMYCKFGLLSTAEKIFHSFR-KSSEDWNTMILGYSNMGQKEKCIDFFREMQLLGIE 363
N L+ +Y K G + TA +F+S K + WN++I GY G + + F+ M ++ +
Sbjct: 349 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 408
Query: 364 PDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKIGNLATAWRI 423
D I+ + +IS +++ + G+ +H IK+ I ++S++N+L+DMY K G + + +I
Sbjct: 409 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 468
Query: 424 FHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVLSACAHLASL 483
F S D ++WNT+IS+ + G A + + +M K P+ T ++ L CA LA+
Sbjct: 469 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 528
Query: 484 DKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVILWNVMISNY 543
G+ IH + G+E+++ + ALI+MY+KCG L+ S ++F M RDV+ W MI Y
Sbjct: 529 RLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAY 588
Query: 544 GMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEGRYLFDRMQ-KYGVKPS 603
GM+G+ E A+E F ME+S + P+ + F++++ AC+H+G V EG F++M+ Y + P
Sbjct: 589 GMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPM 648
Query: 604 LKHYASMVDLLGRSGSLQEAETLVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRIARHAI 663
++HYA +VDLL RS + +AE + +MPI PD ++W S+L AC+ + E R++R I
Sbjct: 649 IEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRII 708
Query: 664 ESDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWS 706
E +P++ GY I S+ Y L +W++V +R +K++ + K G+S
Sbjct: 709 ELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYS 750
BLAST of Lcy04g016660 vs. ExPASy Swiss-Prot
Match:
Q9C507 (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E66 PE=3 SV=1)
HSP 1 Score: 434.9 bits (1117), Expect = 1.8e-120
Identity = 235/706 (33.29%), Postives = 393/706 (55.67%), Query Frame = 0
Query: 4 YASHRQPAFSTQLFRSIHPKDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQFTA 63
YA P S +F + D F++ +I+ + A D Y ++ + ++ ++F
Sbjct: 44 YAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVF 103
Query: 64 PMVVSTCA-ELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLFDEI 123
P V+ CA L+ G +HG +K G+ ++ + +SL+ MY + G A +FD +
Sbjct: 104 PSVLRACAGSREHLSVGGKVHGRIIKGGV-DDDAVIETSLLCMYGQTGNLSDAEKVFDGM 163
Query: 124 TVKDVVAWTALIVGHVQNNESEKGLKCLHQMHRNGETPNYRTLGGGFQACVDMDALVEGR 183
V+D+VAW+ L+ ++N E K L+ M +G P+ T+ + C ++ L R
Sbjct: 164 PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 223
Query: 184 CLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSIISVHAKFG 243
+HG + E + +S+L+MYS+CG + F K+ +K+ +SWT++IS + +
Sbjct: 224 SVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGE 283
Query: 244 LMTECLHLFWEMLAGEIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQCCAVSQITTQ 303
+ L F EM+ I P+ + + +L G I EGK+ HG+ +R+ + +
Sbjct: 284 FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLS 343
Query: 304 NALLSMYCKFGLLSTAEKIFHSFR-KSSEDWNTMILGYSNMGQKEKCIDFFREMQLLGIE 363
AL+ +Y + G LS E + ++ WN++I Y++ G + + FR+M I+
Sbjct: 344 LALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIK 403
Query: 364 PDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKIGNLATAWRI 423
PD +L S IS+C G V +G+ IH + I+ + + + NSL+DMY K G++ +A +
Sbjct: 404 PDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTV 463
Query: 424 FHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVLSACAHLASL 483
F+ + R V++WN+++ + Q G+ EAI LFD M N VT + V+ AC+ + SL
Sbjct: 464 FNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSL 523
Query: 484 DKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVILWNVMISNY 543
+KG+ +H + SG + D+ TALIDMYAKCG+L + +F +M R ++ W+ MI+ Y
Sbjct: 524 EKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAY 583
Query: 544 GMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEGRYLFDRMQKYGVKPSL 603
GMHG + SAI F M ES KPNE+ F+++LSAC H+G V EG+Y F+ M+ +GV P+
Sbjct: 584 GMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNS 643
Query: 604 KHYASMVDLLGRSGSLQEAETLVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRIARHAIE 663
+H+A +DLL RSG L+EA + MP D +VWGSL++ C++H + ++ I +
Sbjct: 644 EHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSD 703
Query: 664 SDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWSAL 708
++ GYY LS++Y G WEE ++R MK ++K G+SA+
Sbjct: 704 IVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAI 746
BLAST of Lcy04g016660 vs. ExPASy Swiss-Prot
Match:
Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)
HSP 1 Score: 411.4 bits (1056), Expect = 2.1e-113
Identity = 230/683 (33.67%), Postives = 373/683 (54.61%), Query Frame = 0
Query: 28 WNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQFTAPMVVSTCAELMMLNHGMNIHGLAL 87
WNSII S NG QA FY +M P+ T P +V C L +
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165
Query: 88 KLGLFAGNSAVGSSLVYMYSKCGRTESASLLFDEITVKDVVAWTALIVGHVQNNESEKGL 147
LG+ N V SSL+ Y + G+ + S LFD + KD V W ++ G+ + + +
Sbjct: 166 SLGMDC-NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 225
Query: 148 KCLHQMHRNGETPNYRTLGGGFQACVDMDALVEGRCLHGLALKSGILCFEVVRSSILSMY 207
K M + +PN T C + G LHGL + SG+ +++S+LSMY
Sbjct: 226 KGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY 285
Query: 208 SRCGSPEEAYSCFCKLNQKDLISWTSIISVHAKFGLMTECLHLFWEMLAGEIIPDEIAIS 267
S+CG ++A F +++ D ++W +IS + + GLM E L F+EM++ ++PD I S
Sbjct: 286 SKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFS 345
Query: 268 CMLLGFGNSDRISEGKAFHGWILRQCCAVSQITTQNALLSMYCKFGLLSTAEKIFHSFRK 327
+L + + K H +I+R ++ T +AL+ Y K +S A+ IF +
Sbjct: 346 SLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLT-SALIDAYFKCRGVSMAQNIFS--QC 405
Query: 328 SSED---WNTMILGYSNMGQKEKCIDFFREMQLLGIEPDLISLVSVISSCSQVGAVNIGR 387
+S D + MI GY + G ++ FR + + I P+ I+LVS++ + A+ +GR
Sbjct: 406 NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGR 465
Query: 388 SIHCYAIKNSIIGNVSIANSLLDMYGKIGNLATAWRIFHSTQQRDVISWNTLISSYRQRG 447
+H + IK +I +++DMY K G + A+ IF +RD++SWN++I+ Q
Sbjct: 466 ELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSD 525
Query: 448 HPAEAIILFDKMVKENFNPNPVTCVIVLSACAHLASLDKGERIHQYIKESGFETDITVRT 507
+P+ AI +F +M + V+ LSACA+L S G+ IH ++ + +D+ +
Sbjct: 526 NPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSES 585
Query: 508 ALIDMYAKCGELQTSRKLFNSMEERDVILWNVMISNYGMHGDVESAIEIF-QLMEESNVK 567
LIDMYAKCG L+ + +F +M+E++++ WN +I+ G HG ++ ++ +F +++E+S ++
Sbjct: 586 TLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIR 645
Query: 568 PNELTFLSLLSACNHTGHVVEG-RYLFDRMQKYGVKPSLKHYASMVDLLGRSGSLQEAET 627
P+++TFL ++S+C H G V EG R+ + YG++P +HYA +VDL GR+G L EA
Sbjct: 646 PDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYE 705
Query: 628 LVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRIARHAIESDPENDGYYITLSDLYGCLGR 687
V SMP PD VWG+LL AC+LH E+ + ++ DP N GYY+ +S+ +
Sbjct: 706 TVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANARE 765
Query: 688 WEEVEKVRGMMKERGVEKTAGWS 706
WE V KVR +MKER V+K G+S
Sbjct: 766 WESVTKVRSLMKEREVQKIPGYS 784
BLAST of Lcy04g016660 vs. ExPASy Swiss-Prot
Match:
Q0WN60 (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)
HSP 1 Score: 411.4 bits (1056), Expect = 2.1e-113
Identity = 234/715 (32.73%), Postives = 393/715 (54.97%), Query Frame = 0
Query: 1 MSFYASHRQPAFSTQLFRSIHPKDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSS-LPN 60
++ YA P S +F ++ K+ F WN++I S+ N Y + + +++M +++ LP+
Sbjct: 127 ITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPD 186
Query: 61 QFTAPMVVSTCAELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLF 120
FT P V+ CA + + G+ +HGL +K GL + VG++LV Y G A LF
Sbjct: 187 HFTYPCVIKACAGMSDVGIGLAVHGLVVKTGL-VEDVFVGNALVSFYGTHGFVTDALQLF 246
Query: 121 DEITVKDVVAWTALIVGHVQNNESEKGLKCL-HQMHRNGE---TPNYRTLGGGFQACVDM 180
D + +++V+W ++I N SE+ L M NG+ P+ TL C
Sbjct: 247 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 306
Query: 181 DALVEGRCLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSII 240
+ G+ +HG A+K + V+ ++++ MYS+CG A F N K+++SW +++
Sbjct: 307 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 366
Query: 241 SVHAKFGLMTECLHLFWEMLAG--EIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQC 300
+ G + +MLAG ++ DE+ I + + + K H + L+Q
Sbjct: 367 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 426
Query: 301 CAVSQITTQNALLSMYCKFGLLSTAEKIFHSFR-KSSEDWNTMILGYSNMGQKEKCIDFF 360
+++ NA ++ Y K G LS A+++FH R K+ WN +I G++ +D
Sbjct: 427 FVYNELVA-NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAH 486
Query: 361 REMQLLGIEPDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKI 420
+M++ G+ PD ++ S++S+CS++ ++ +G+ +H + I+N + ++ + S+L +Y
Sbjct: 487 LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 546
Query: 421 GNLATAWRIFHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVL 480
G L T +F + + + ++SWNT+I+ Y Q G P A+ +F +MV ++ + V
Sbjct: 547 GELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVF 606
Query: 481 SACAHLASLDKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVI 540
AC+ L SL G H Y + E D + +LIDMYAK G + S K+FN ++E+
Sbjct: 607 GACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTA 666
Query: 541 LWNVMISNYGMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEG-RYLFDR 600
WN MI YG+HG + AI++F+ M+ + P++LTFL +L+ACNH+G + EG RYL
Sbjct: 667 SWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQM 726
Query: 601 MQKYGVKPSLKHYASMVDLLGRSGSLQEAETLVV-SMPIAPDGTVWGSLLSACKLHNEFE 660
+G+KP+LKHYA ++D+LGR+G L +A +V M D +W SLLS+C++H E
Sbjct: 727 KSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 786
Query: 661 MGVRIARHAIESDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWS 706
MG ++A E +PE Y+ LS+LY LG+WE+V KVR M E + K AG S
Sbjct: 787 MGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCS 839
BLAST of Lcy04g016660 vs. ExPASy TrEMBL
Match:
A0A6J1DLQ3 (pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021614 PE=4 SV=1)
HSP 1 Score: 1275.4 bits (3299), Expect = 0.0e+00
Identity = 623/708 (87.99%), Postives = 657/708 (92.80%), Query Frame = 0
Query: 1 MSFYASHRQPAFSTQLFRSIHPKDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQ 60
MSFYASHRQPA ST LF SIHPKDGFLWNSIIQSHFSNGDY+QAF FYLQMRASSSLPNQ
Sbjct: 69 MSFYASHRQPALSTHLFHSIHPKDGFLWNSIIQSHFSNGDYLQAFGFYLQMRASSSLPNQ 128
Query: 61 FTAPMVVSTCAELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLFD 120
FT PMV+STCAELMMLNHGMNIHGLALKLGLF GNSAVGSSLVYMYSKCG TESASLLFD
Sbjct: 129 FTVPMVLSTCAELMMLNHGMNIHGLALKLGLFYGNSAVGSSLVYMYSKCGHTESASLLFD 188
Query: 121 EITVKDVVAWTALIVGHVQNNESEKGLKCLHQMHRNGETPNYRTLGGGFQACVDMDALVE 180
EIT+KDVVAWTALIVGHVQNNESEKGLKCL MHR G PNYRTLG GFQACVD+DALVE
Sbjct: 189 EITLKDVVAWTALIVGHVQNNESEKGLKCLFDMHRYGGAPNYRTLGSGFQACVDLDALVE 248
Query: 181 GRCLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSIISVHAK 240
GRCLHGLALK+GILCFEV++S +LSMYSRCGSPEEAY CFCKLN+KDLISWTSII+VHAK
Sbjct: 249 GRCLHGLALKTGILCFEVIKSCLLSMYSRCGSPEEAYRCFCKLNKKDLISWTSIIAVHAK 308
Query: 241 FGLMTECLHLFWEMLAGEIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQCCAVSQIT 300
FGLMTECL LFWEM A EIIPDEIAISCM+LGFGNSDR SEGKAFHGWILRQC AVS+I
Sbjct: 309 FGLMTECLSLFWEMQADEIIPDEIAISCMVLGFGNSDRTSEGKAFHGWILRQCYAVSEI- 368
Query: 301 TQNALLSMYCKFGLLSTAEKIFHSFRKSS-EDWNTMILGYSNMGQKEKCIDFFREMQLLG 360
T NALLSMYCKFGLL+T EKIFHSF KSS EDWNTMI GYSNMGQKEKCID FR+MQLLG
Sbjct: 369 THNALLSMYCKFGLLNTTEKIFHSFHKSSKEDWNTMISGYSNMGQKEKCIDLFRDMQLLG 428
Query: 361 IEPDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKIGNLATAW 420
I PDLISL SVISSCSQVGAVNIGRSIHCYAIKNSII NVSIANSLLDMYGK GNL TAW
Sbjct: 429 IGPDLISLASVISSCSQVGAVNIGRSIHCYAIKNSIIENVSIANSLLDMYGKSGNLTTAW 488
Query: 421 RIFHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVLSACAHLA 480
RIFH TQQRD+ISWNTLISSY+Q GHPAEAI+LFD+M+K N PN +TCVIVLSACAHLA
Sbjct: 489 RIFHRTQQRDIISWNTLISSYKQSGHPAEAIVLFDEMIKNNLKPNAITCVIVLSACAHLA 548
Query: 481 SLDKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVILWNVMIS 540
SLDKGERIHQYI+E+G+ TDIT+RT+LIDMYAKCGEL+TSRKLFN++EERDVILWNVMIS
Sbjct: 549 SLDKGERIHQYIRENGYGTDITIRTSLIDMYAKCGELETSRKLFNAVEERDVILWNVMIS 608
Query: 541 NYGMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEGRYLFDRMQKYGVKP 600
+YGMHG ESAIEIF+LMEESNVKPN LTFLSLLSACNH G V EGR LFDRMQKYGVK
Sbjct: 609 SYGMHGHAESAIEIFELMEESNVKPNSLTFLSLLSACNHGGLVEEGRRLFDRMQKYGVKV 668
Query: 601 SLKHYASMVDLLGRSGSLQEAETLVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRIARHA 660
SLKHYASMVDLLGRSGSLQEAETLV+SMPI+PDGTVWGSLLSACKLHNEFEMGVRIARHA
Sbjct: 669 SLKHYASMVDLLGRSGSLQEAETLVLSMPISPDGTVWGSLLSACKLHNEFEMGVRIARHA 728
Query: 661 IESDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWSAL 708
IESDPENDGYYI LSDLYGCLGRWEEVE+VR +MKERGVEK GWSAL
Sbjct: 729 IESDPENDGYYIILSDLYGCLGRWEEVERVRVIMKERGVEKRTGWSAL 775
BLAST of Lcy04g016660 vs. ExPASy TrEMBL
Match:
A0A6J1JGK6 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111484200 PE=4 SV=1)
HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 612/707 (86.56%), Postives = 655/707 (92.64%), Query Frame = 0
Query: 1 MSFYASHRQPAFSTQLFRSIHPKDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQ 60
M+FYA H QPAFSTQLFR +HPKD FLWNSIIQSHFSNGDY+QAFDFYL+MRASSSLPNQ
Sbjct: 72 MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 131
Query: 61 FTAPMVVSTCAELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLFD 120
FT PMVVSTCAELMMLNHGMNIHGLALKLGLF GNSAVGSSL+YMYSKCG ESASL+F+
Sbjct: 132 FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 191
Query: 121 EITVKDVVAWTALIVGHVQNNESEKGLKCLHQMHRNGETPNYRTLGGGFQACVDMDALVE 180
+ITVKDVVAWTALI+G+VQNNESEKGLKCL +MHRNG TPNYRT+GGGFQACVD++ALVE
Sbjct: 192 DITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLEALVE 251
Query: 181 GRCLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSIISVHAK 240
GRCLHGLALKSG LCFEVV+SSILSMYSRCGSPEEAY CF KL QKDLISWTSI++VH+K
Sbjct: 252 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIMAVHSK 311
Query: 241 FGLMTECLHLFWEMLAGEIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQCCAVSQIT 300
GLM+ECLHLFWEM A IIPD+I ISCMLLGFGN DRISEGKAFH WIL+QCCAVS I
Sbjct: 312 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAVSGI- 371
Query: 301 TQNALLSMYCKFGLLSTAEKIFHSFRKSSEDWNTMILGYSNMGQKEKCIDFFREMQLLGI 360
T NALLSMYCKFGLL TA+KIFHSF KSSEDWNTMILGYSNMG+KEKCIDFFREM LLGI
Sbjct: 372 THNALLSMYCKFGLLRTADKIFHSFHKSSEDWNTMILGYSNMGEKEKCIDFFREMYLLGI 431
Query: 361 EPDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKIGNLATAWR 420
EPDL SLVSVISSC VGAVNIGRS+HCYAIKNSII NVSIANSLLDMYGK GNL AWR
Sbjct: 432 EPDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKSGNLTAAWR 491
Query: 421 IFHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVLSACAHLAS 480
IFH TQQ+D+ISWNTLIS+Y+Q GHP+EAI LFDKM+KE FNPN VTC+IVLSACAHLAS
Sbjct: 492 IFHRTQQKDIISWNTLISTYKQSGHPSEAIDLFDKMIKEKFNPNGVTCIIVLSACAHLAS 551
Query: 481 LDKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVILWNVMISN 540
LDKGERIHQYIKE+GFETDITVRTALIDMYAKCGEL+TSR LFNSMEERDVIL NVMISN
Sbjct: 552 LDKGERIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISN 611
Query: 541 YGMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEGRYLFDRMQKYGVKPS 600
YGMHG VESAIEIFQLME+SN+KPN LTFLSLLSACNH GH+VEGR LFD M KYG+KPS
Sbjct: 612 YGMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPS 671
Query: 601 LKHYASMVDLLGRSGSLQEAETLVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRIARHAI 660
LKHYASMVDLLGRSGSL+EAE LV+SMPI PDGTVWGSLLSACKLHNEFEMG+RI RHAI
Sbjct: 672 LKHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIGRHAI 731
Query: 661 ESDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWSAL 708
ESDP+NDGYYI LSDLYGCLGRWEEVEKVRG+MK+RGVEK AGWSAL
Sbjct: 732 ESDPKNDGYYIVLSDLYGCLGRWEEVEKVRGVMKQRGVEKRAGWSAL 777
BLAST of Lcy04g016660 vs. ExPASy TrEMBL
Match:
A0A6J1FVR1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111448916 PE=4 SV=1)
HSP 1 Score: 1259.6 bits (3258), Expect = 0.0e+00
Identity = 611/707 (86.42%), Postives = 650/707 (91.94%), Query Frame = 0
Query: 1 MSFYASHRQPAFSTQLFRSIHPKDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQ 60
M+FYA H QPAFSTQLFR +HPKD FLWNSIIQSHFSNGDY+QAFDFYL+MRASSSLPNQ
Sbjct: 72 MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 131
Query: 61 FTAPMVVSTCAELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLFD 120
FT PMVVSTCAELMMLNHGMNIHGLALKLGLF GNSAVGSSL+YMYSKCG ESASL+F+
Sbjct: 132 FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 191
Query: 121 EITVKDVVAWTALIVGHVQNNESEKGLKCLHQMHRNGETPNYRTLGGGFQACVDMDALVE 180
EITVKDVVAWTALI+G+VQNNESEKGLKCL +MHRNG TPNYRT+GGGFQACVD+DALVE
Sbjct: 192 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 251
Query: 181 GRCLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSIISVHAK 240
GRCLHGLALKSG LCFEVV+SSILSMYSRCGSPEEAY CF KL QKDLISWTSII+VH+K
Sbjct: 252 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 311
Query: 241 FGLMTECLHLFWEMLAGEIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQCCAVSQIT 300
GLM+ECLHLFWEM A IIPD+I ISCMLLGFGN DRISEG AFH WIL+QC AVS I
Sbjct: 312 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGNAFHAWILKQCYAVSGI- 371
Query: 301 TQNALLSMYCKFGLLSTAEKIFHSFRKSSEDWNTMILGYSNMGQKEKCIDFFREMQLLGI 360
T NALLSMYCKFGLL TA+KIFHSF KSSEDWNTMILGYSNMG+KEKCIDFFREM LLGI
Sbjct: 372 THNALLSMYCKFGLLRTADKIFHSFHKSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGI 431
Query: 361 EPDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKIGNLATAWR 420
EPDL SLVSVISSC V AVNIGRS+HCYAIKNSII NVSIANSLLDMYGK GNL AWR
Sbjct: 432 EPDLNSLVSVISSCLPVRAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKSGNLTAAWR 491
Query: 421 IFHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVLSACAHLAS 480
IFH TQQ+D++SWNTLISSY+Q GHP+EAI LFDKM+KE FNPN VTCVI LSACAHLAS
Sbjct: 492 IFHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKFNPNVVTCVIALSACAHLAS 551
Query: 481 LDKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVILWNVMISN 540
LDKG +IHQYIKE+G ETDITVRTALIDMYAKCGEL++SR LFNSMEERDVIL NVMISN
Sbjct: 552 LDKGLKIHQYIKENGCETDITVRTALIDMYAKCGELESSRTLFNSMEERDVILCNVMISN 611
Query: 541 YGMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEGRYLFDRMQKYGVKPS 600
YGMHG VESAIEIFQLME+SN+KPN LTFLSLLSACNH GH+VEGR LFD M KYG+KPS
Sbjct: 612 YGMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHIVEGRRLFDVMHKYGIKPS 671
Query: 601 LKHYASMVDLLGRSGSLQEAETLVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRIARHAI 660
LKHYASMVDLLGRSGSL+EAE LV+SMPI PDGTVWGSLLSACKLHNEFEMG+RIARHAI
Sbjct: 672 LKHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAI 731
Query: 661 ESDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWSAL 708
ESDP+NDGYYI LSDLYGCLGRWEEVEKVRGMMKERGVEK AGWSAL
Sbjct: 732 ESDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGVEKRAGWSAL 777
BLAST of Lcy04g016660 vs. ExPASy TrEMBL
Match:
A0A1S3C9K9 (pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498381 PE=4 SV=1)
HSP 1 Score: 1218.0 bits (3150), Expect = 0.0e+00
Identity = 587/707 (83.03%), Postives = 638/707 (90.24%), Query Frame = 0
Query: 1 MSFYASHRQPAFSTQLFRSIHPKDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQ 60
M+FYASHRQPAFST LFR IH KD FLWNSIIQSHFSNGDY +AFDFYLQMRASSSLPNQ
Sbjct: 124 MAFYASHRQPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQ 183
Query: 61 FTAPMVVSTCAELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLFD 120
FT PMVVSTCAELMM NHGMNIHGL KLGLF NSA+GSS +YMYSKCG ESASL+F
Sbjct: 184 FTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVSNSAIGSSFIYMYSKCGHVESASLMFS 243
Query: 121 EITVKDVVAWTALIVGHVQNNESEKGLKCLHQMHRNGETPNYRTLGGGFQACVDMDALVE 180
EITVKDVVAWTALIVG+VQNNES +GLKCL +MHR G TPNY+T+G GFQACVD+DALVE
Sbjct: 244 EITVKDVVAWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVE 303
Query: 181 GRCLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSIISVHAK 240
G+CLHGLALK+G LCF+VV+S+ILSMYSRCGSPEEAY CFCKL+QKDLISWTSII+VH+K
Sbjct: 304 GKCLHGLALKNGFLCFKVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSK 363
Query: 241 FGLMTECLHLFWEMLAGEIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQCCAVSQIT 300
FGLM+ECLHLFWEM EIIPDEI ISCML+GFGNS RI EGKAFH WIL+QCCA++ I
Sbjct: 364 FGLMSECLHLFWEMQDSEIIPDEIVISCMLMGFGNSGRIFEGKAFHAWILKQCCAMNGI- 423
Query: 301 TQNALLSMYCKFGLLSTAEKIFHSFRKSSEDWNTMILGYSNMGQKEKCIDFFREMQLLGI 360
T NALLSMYCKFG L TA KIFHSF KSSEDW+TMILGYSNMGQKE CI F REM LLG
Sbjct: 424 THNALLSMYCKFGHLGTANKIFHSFHKSSEDWSTMILGYSNMGQKENCISFLREMLLLGR 483
Query: 361 EPDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKIGNLATAWR 420
EPDL SLVSVISSCSQVGA+NIGRSIHCYAIKNSII NVSIANSL+DMYGK G++ WR
Sbjct: 484 EPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSIANSLMDMYGKSGHVTATWR 543
Query: 421 IFHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVLSACAHLAS 480
IFH TQQRDVISWNTLISSY+Q G+ AEAIILFDKMVKE PN VTCVIVLS CAHLAS
Sbjct: 544 IFHRTQQRDVISWNTLISSYKQSGNLAEAIILFDKMVKEKVYPNKVTCVIVLSVCAHLAS 603
Query: 481 LDKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVILWNVMISN 540
LDKGE+IHQYIKE+GFE++IT+RTALIDMYAKCGEL+TSRKLFNS EERD ILWNVMISN
Sbjct: 604 LDKGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDAILWNVMISN 663
Query: 541 YGMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEGRYLFDRMQKYGVKPS 600
YGMHG VESA+EIFQLMEESN+KPN TFLSLLSACNHTGHV+EGR LFDRM KYG++PS
Sbjct: 664 YGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRDLFDRMTKYGIEPS 723
Query: 601 LKHYASMVDLLGRSGSLQEAETLVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRIARHAI 660
LKHYAS++DLLGRSGSL+ AE LV+SMPI PDGTVWGSLLSACK+HNEFEMGVR+AR+AI
Sbjct: 724 LKHYASVIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEMGVRLARYAI 783
Query: 661 ESDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWSAL 708
ESDP+NDGYYI LSDLY CLGRW+EVEKVRGMMKERGVEK GWSAL
Sbjct: 784 ESDPKNDGYYIILSDLYSCLGRWDEVEKVRGMMKERGVEKRTGWSAL 829
BLAST of Lcy04g016660 vs. ExPASy TrEMBL
Match:
A0A1S4E2D5 (pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498381 PE=4 SV=1)
HSP 1 Score: 1218.0 bits (3150), Expect = 0.0e+00
Identity = 587/707 (83.03%), Postives = 638/707 (90.24%), Query Frame = 0
Query: 1 MSFYASHRQPAFSTQLFRSIHPKDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQ 60
M+FYASHRQPAFST LFR IH KD FLWNSIIQSHFSNGDY +AFDFYLQMRASSSLPNQ
Sbjct: 79 MAFYASHRQPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQ 138
Query: 61 FTAPMVVSTCAELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLFD 120
FT PMVVSTCAELMM NHGMNIHGL KLGLF NSA+GSS +YMYSKCG ESASL+F
Sbjct: 139 FTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVSNSAIGSSFIYMYSKCGHVESASLMFS 198
Query: 121 EITVKDVVAWTALIVGHVQNNESEKGLKCLHQMHRNGETPNYRTLGGGFQACVDMDALVE 180
EITVKDVVAWTALIVG+VQNNES +GLKCL +MHR G TPNY+T+G GFQACVD+DALVE
Sbjct: 199 EITVKDVVAWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVE 258
Query: 181 GRCLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSIISVHAK 240
G+CLHGLALK+G LCF+VV+S+ILSMYSRCGSPEEAY CFCKL+QKDLISWTSII+VH+K
Sbjct: 259 GKCLHGLALKNGFLCFKVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSK 318
Query: 241 FGLMTECLHLFWEMLAGEIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQCCAVSQIT 300
FGLM+ECLHLFWEM EIIPDEI ISCML+GFGNS RI EGKAFH WIL+QCCA++ I
Sbjct: 319 FGLMSECLHLFWEMQDSEIIPDEIVISCMLMGFGNSGRIFEGKAFHAWILKQCCAMNGI- 378
Query: 301 TQNALLSMYCKFGLLSTAEKIFHSFRKSSEDWNTMILGYSNMGQKEKCIDFFREMQLLGI 360
T NALLSMYCKFG L TA KIFHSF KSSEDW+TMILGYSNMGQKE CI F REM LLG
Sbjct: 379 THNALLSMYCKFGHLGTANKIFHSFHKSSEDWSTMILGYSNMGQKENCISFLREMLLLGR 438
Query: 361 EPDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKIGNLATAWR 420
EPDL SLVSVISSCSQVGA+NIGRSIHCYAIKNSII NVSIANSL+DMYGK G++ WR
Sbjct: 439 EPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSIANSLMDMYGKSGHVTATWR 498
Query: 421 IFHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVLSACAHLAS 480
IFH TQQRDVISWNTLISSY+Q G+ AEAIILFDKMVKE PN VTCVIVLS CAHLAS
Sbjct: 499 IFHRTQQRDVISWNTLISSYKQSGNLAEAIILFDKMVKEKVYPNKVTCVIVLSVCAHLAS 558
Query: 481 LDKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVILWNVMISN 540
LDKGE+IHQYIKE+GFE++IT+RTALIDMYAKCGEL+TSRKLFNS EERD ILWNVMISN
Sbjct: 559 LDKGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDAILWNVMISN 618
Query: 541 YGMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEGRYLFDRMQKYGVKPS 600
YGMHG VESA+EIFQLMEESN+KPN TFLSLLSACNHTGHV+EGR LFDRM KYG++PS
Sbjct: 619 YGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRDLFDRMTKYGIEPS 678
Query: 601 LKHYASMVDLLGRSGSLQEAETLVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRIARHAI 660
LKHYAS++DLLGRSGSL+ AE LV+SMPI PDGTVWGSLLSACK+HNEFEMGVR+AR+AI
Sbjct: 679 LKHYASVIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEMGVRLARYAI 738
Query: 661 ESDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWSAL 708
ESDP+NDGYYI LSDLY CLGRW+EVEKVRGMMKERGVEK GWSAL
Sbjct: 739 ESDPKNDGYYIILSDLYSCLGRWDEVEKVRGMMKERGVEKRTGWSAL 784
BLAST of Lcy04g016660 vs. NCBI nr
Match:
XP_022154319.1 (pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X1 [Momordica charantia] >XP_022154320.1 pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X1 [Momordica charantia] >XP_022154321.1 pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X1 [Momordica charantia])
HSP 1 Score: 1275.4 bits (3299), Expect = 0.0e+00
Identity = 623/708 (87.99%), Postives = 657/708 (92.80%), Query Frame = 0
Query: 1 MSFYASHRQPAFSTQLFRSIHPKDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQ 60
MSFYASHRQPA ST LF SIHPKDGFLWNSIIQSHFSNGDY+QAF FYLQMRASSSLPNQ
Sbjct: 69 MSFYASHRQPALSTHLFHSIHPKDGFLWNSIIQSHFSNGDYLQAFGFYLQMRASSSLPNQ 128
Query: 61 FTAPMVVSTCAELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLFD 120
FT PMV+STCAELMMLNHGMNIHGLALKLGLF GNSAVGSSLVYMYSKCG TESASLLFD
Sbjct: 129 FTVPMVLSTCAELMMLNHGMNIHGLALKLGLFYGNSAVGSSLVYMYSKCGHTESASLLFD 188
Query: 121 EITVKDVVAWTALIVGHVQNNESEKGLKCLHQMHRNGETPNYRTLGGGFQACVDMDALVE 180
EIT+KDVVAWTALIVGHVQNNESEKGLKCL MHR G PNYRTLG GFQACVD+DALVE
Sbjct: 189 EITLKDVVAWTALIVGHVQNNESEKGLKCLFDMHRYGGAPNYRTLGSGFQACVDLDALVE 248
Query: 181 GRCLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSIISVHAK 240
GRCLHGLALK+GILCFEV++S +LSMYSRCGSPEEAY CFCKLN+KDLISWTSII+VHAK
Sbjct: 249 GRCLHGLALKTGILCFEVIKSCLLSMYSRCGSPEEAYRCFCKLNKKDLISWTSIIAVHAK 308
Query: 241 FGLMTECLHLFWEMLAGEIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQCCAVSQIT 300
FGLMTECL LFWEM A EIIPDEIAISCM+LGFGNSDR SEGKAFHGWILRQC AVS+I
Sbjct: 309 FGLMTECLSLFWEMQADEIIPDEIAISCMVLGFGNSDRTSEGKAFHGWILRQCYAVSEI- 368
Query: 301 TQNALLSMYCKFGLLSTAEKIFHSFRKSS-EDWNTMILGYSNMGQKEKCIDFFREMQLLG 360
T NALLSMYCKFGLL+T EKIFHSF KSS EDWNTMI GYSNMGQKEKCID FR+MQLLG
Sbjct: 369 THNALLSMYCKFGLLNTTEKIFHSFHKSSKEDWNTMISGYSNMGQKEKCIDLFRDMQLLG 428
Query: 361 IEPDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKIGNLATAW 420
I PDLISL SVISSCSQVGAVNIGRSIHCYAIKNSII NVSIANSLLDMYGK GNL TAW
Sbjct: 429 IGPDLISLASVISSCSQVGAVNIGRSIHCYAIKNSIIENVSIANSLLDMYGKSGNLTTAW 488
Query: 421 RIFHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVLSACAHLA 480
RIFH TQQRD+ISWNTLISSY+Q GHPAEAI+LFD+M+K N PN +TCVIVLSACAHLA
Sbjct: 489 RIFHRTQQRDIISWNTLISSYKQSGHPAEAIVLFDEMIKNNLKPNAITCVIVLSACAHLA 548
Query: 481 SLDKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVILWNVMIS 540
SLDKGERIHQYI+E+G+ TDIT+RT+LIDMYAKCGEL+TSRKLFN++EERDVILWNVMIS
Sbjct: 549 SLDKGERIHQYIRENGYGTDITIRTSLIDMYAKCGELETSRKLFNAVEERDVILWNVMIS 608
Query: 541 NYGMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEGRYLFDRMQKYGVKP 600
+YGMHG ESAIEIF+LMEESNVKPN LTFLSLLSACNH G V EGR LFDRMQKYGVK
Sbjct: 609 SYGMHGHAESAIEIFELMEESNVKPNSLTFLSLLSACNHGGLVEEGRRLFDRMQKYGVKV 668
Query: 601 SLKHYASMVDLLGRSGSLQEAETLVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRIARHA 660
SLKHYASMVDLLGRSGSLQEAETLV+SMPI+PDGTVWGSLLSACKLHNEFEMGVRIARHA
Sbjct: 669 SLKHYASMVDLLGRSGSLQEAETLVLSMPISPDGTVWGSLLSACKLHNEFEMGVRIARHA 728
Query: 661 IESDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWSAL 708
IESDPENDGYYI LSDLYGCLGRWEEVE+VR +MKERGVEK GWSAL
Sbjct: 729 IESDPENDGYYIILSDLYGCLGRWEEVERVRVIMKERGVEKRTGWSAL 775
BLAST of Lcy04g016660 vs. NCBI nr
Match:
XP_022986468.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 612/707 (86.56%), Postives = 655/707 (92.64%), Query Frame = 0
Query: 1 MSFYASHRQPAFSTQLFRSIHPKDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQ 60
M+FYA H QPAFSTQLFR +HPKD FLWNSIIQSHFSNGDY+QAFDFYL+MRASSSLPNQ
Sbjct: 72 MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 131
Query: 61 FTAPMVVSTCAELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLFD 120
FT PMVVSTCAELMMLNHGMNIHGLALKLGLF GNSAVGSSL+YMYSKCG ESASL+F+
Sbjct: 132 FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 191
Query: 121 EITVKDVVAWTALIVGHVQNNESEKGLKCLHQMHRNGETPNYRTLGGGFQACVDMDALVE 180
+ITVKDVVAWTALI+G+VQNNESEKGLKCL +MHRNG TPNYRT+GGGFQACVD++ALVE
Sbjct: 192 DITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLEALVE 251
Query: 181 GRCLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSIISVHAK 240
GRCLHGLALKSG LCFEVV+SSILSMYSRCGSPEEAY CF KL QKDLISWTSI++VH+K
Sbjct: 252 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIMAVHSK 311
Query: 241 FGLMTECLHLFWEMLAGEIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQCCAVSQIT 300
GLM+ECLHLFWEM A IIPD+I ISCMLLGFGN DRISEGKAFH WIL+QCCAVS I
Sbjct: 312 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAVSGI- 371
Query: 301 TQNALLSMYCKFGLLSTAEKIFHSFRKSSEDWNTMILGYSNMGQKEKCIDFFREMQLLGI 360
T NALLSMYCKFGLL TA+KIFHSF KSSEDWNTMILGYSNMG+KEKCIDFFREM LLGI
Sbjct: 372 THNALLSMYCKFGLLRTADKIFHSFHKSSEDWNTMILGYSNMGEKEKCIDFFREMYLLGI 431
Query: 361 EPDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKIGNLATAWR 420
EPDL SLVSVISSC VGAVNIGRS+HCYAIKNSII NVSIANSLLDMYGK GNL AWR
Sbjct: 432 EPDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKSGNLTAAWR 491
Query: 421 IFHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVLSACAHLAS 480
IFH TQQ+D+ISWNTLIS+Y+Q GHP+EAI LFDKM+KE FNPN VTC+IVLSACAHLAS
Sbjct: 492 IFHRTQQKDIISWNTLISTYKQSGHPSEAIDLFDKMIKEKFNPNGVTCIIVLSACAHLAS 551
Query: 481 LDKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVILWNVMISN 540
LDKGERIHQYIKE+GFETDITVRTALIDMYAKCGEL+TSR LFNSMEERDVIL NVMISN
Sbjct: 552 LDKGERIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISN 611
Query: 541 YGMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEGRYLFDRMQKYGVKPS 600
YGMHG VESAIEIFQLME+SN+KPN LTFLSLLSACNH GH+VEGR LFD M KYG+KPS
Sbjct: 612 YGMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPS 671
Query: 601 LKHYASMVDLLGRSGSLQEAETLVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRIARHAI 660
LKHYASMVDLLGRSGSL+EAE LV+SMPI PDGTVWGSLLSACKLHNEFEMG+RI RHAI
Sbjct: 672 LKHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIGRHAI 731
Query: 661 ESDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWSAL 708
ESDP+NDGYYI LSDLYGCLGRWEEVEKVRG+MK+RGVEK AGWSAL
Sbjct: 732 ESDPKNDGYYIVLSDLYGCLGRWEEVEKVRGVMKQRGVEKRAGWSAL 777
BLAST of Lcy04g016660 vs. NCBI nr
Match:
KAG7010985.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1266.9 bits (3277), Expect = 0.0e+00
Identity = 613/707 (86.70%), Postives = 655/707 (92.64%), Query Frame = 0
Query: 1 MSFYASHRQPAFSTQLFRSIHPKDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQ 60
M+FYA H QPAFSTQLFR +HPKD FLWNSIIQSHFSNGDY+QAFDFYL+MRASSSLPNQ
Sbjct: 1 MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 60
Query: 61 FTAPMVVSTCAELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLFD 120
FT PMVVSTCAELMMLNHGMNIHGLALKLGLF GNSAVGSSL+YMYSKCG ESASL+F+
Sbjct: 61 FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 120
Query: 121 EITVKDVVAWTALIVGHVQNNESEKGLKCLHQMHRNGETPNYRTLGGGFQACVDMDALVE 180
EITVKDVVAWTALI+G+VQNNESEKGLKCL +MHRNG TPNYRT+GGGFQACVD+DALVE
Sbjct: 121 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 180
Query: 181 GRCLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSIISVHAK 240
GRCLHGLALKSG LCFEVV+SSILSMYSRCGSPEEAY CF KL QKDLISWTSII+VH+K
Sbjct: 181 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 240
Query: 241 FGLMTECLHLFWEMLAGEIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQCCAVSQIT 300
GLM+ECLHLFWEM A IIPD+I ISCMLLGFGN DRISEGKAFH WIL+QCCA+S I
Sbjct: 241 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKAFHAWILKQCCAMSGI- 300
Query: 301 TQNALLSMYCKFGLLSTAEKIFHSFRKSSEDWNTMILGYSNMGQKEKCIDFFREMQLLGI 360
T NALLSMYCKFGLL TA+KIFHSF +SSEDWNTMILGYSNMG+KEKCIDFFREM LLGI
Sbjct: 301 THNALLSMYCKFGLLRTADKIFHSFHRSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGI 360
Query: 361 EPDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKIGNLATAWR 420
EPDL SLVSVISSC VGAVNIGRS+HCYAIKNSII NVSIANSLLDMYGK GNL A R
Sbjct: 361 EPDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKRGNLTAASR 420
Query: 421 IFHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVLSACAHLAS 480
IFH TQQ+D++SWNTLISSY+Q GHP+EAI LFDKM+KE +NPN VTCVIVLSACAHLAS
Sbjct: 421 IFHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKYNPNGVTCVIVLSACAHLAS 480
Query: 481 LDKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVILWNVMISN 540
LDKGE+IHQYIKE+GFETDITVRTALIDMYAKCGEL+TSR LFNSMEERDVIL NVMISN
Sbjct: 481 LDKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISN 540
Query: 541 YGMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEGRYLFDRMQKYGVKPS 600
YGMHG VESAIEIFQLME+SN+KPN LTFLSLLSACNH GH+VEGR LFD M KYG+KPS
Sbjct: 541 YGMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPS 600
Query: 601 LKHYASMVDLLGRSGSLQEAETLVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRIARHAI 660
LKHYASMVDLLGRSGSL+EAE LV+SMPI PDGTVWGSLLSACKLHNEFEMG+RIARHAI
Sbjct: 601 LKHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAI 660
Query: 661 ESDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWSAL 708
ESDP+NDGYYI LSDLYGCLGRWEEVEKVRGMMKERG+EK AGWSAL
Sbjct: 661 ESDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGLEKRAGWSAL 706
BLAST of Lcy04g016660 vs. NCBI nr
Match:
XP_023513090.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1266.5 bits (3276), Expect = 0.0e+00
Identity = 611/707 (86.42%), Postives = 654/707 (92.50%), Query Frame = 0
Query: 1 MSFYASHRQPAFSTQLFRSIHPKDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQ 60
M+FYA H QPAFSTQLFR +HPKD FLWNSIIQSHFSNGDY+QAFDFYL+MRASSSLPNQ
Sbjct: 72 MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 131
Query: 61 FTAPMVVSTCAELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLFD 120
FT PMVVSTCAELMMLNHGMNIHGLALKLGLF GNSAVGSSL+YMYSKCG ESASL+F+
Sbjct: 132 FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 191
Query: 121 EITVKDVVAWTALIVGHVQNNESEKGLKCLHQMHRNGETPNYRTLGGGFQACVDMDALVE 180
EITVKDVVAWTALI+G+VQNNESEKGLKCL +MHRNG TPNYRT+GGGFQACVD++ALVE
Sbjct: 192 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLEALVE 251
Query: 181 GRCLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSIISVHAK 240
GRCLHGLALKSG LCFEVV+SSILSMYSRCGSPEEAY CF KL QKDLISWTSII+VH+K
Sbjct: 252 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 311
Query: 241 FGLMTECLHLFWEMLAGEIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQCCAVSQIT 300
GLM+ECLHLFWEM A IIPD+I ISCMLLGFGN DRISEGKA H WIL+QCCA+S I
Sbjct: 312 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGKALHAWILKQCCAMSGI- 371
Query: 301 TQNALLSMYCKFGLLSTAEKIFHSFRKSSEDWNTMILGYSNMGQKEKCIDFFREMQLLGI 360
T NALLSMYCKFGLL A+KIFHSF KSSEDWNTMILGYSNMG+KEKCIDFFREM LLGI
Sbjct: 372 THNALLSMYCKFGLLRMADKIFHSFHKSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGI 431
Query: 361 EPDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKIGNLATAWR 420
EPDL SLVSVISSC VGAVNIGRS+HCYAIKNSII NVSIANSLLDMYGK GNL AWR
Sbjct: 432 EPDLNSLVSVISSCLPVGAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKSGNLTAAWR 491
Query: 421 IFHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVLSACAHLAS 480
IFH TQQ+D++SWNTLISSY+Q GHP+EAI LFDKM+KE FNPN VTCVIVLSAC+HLAS
Sbjct: 492 IFHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKFNPNGVTCVIVLSACSHLAS 551
Query: 481 LDKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVILWNVMISN 540
LDKGE+IHQYIKE+GFETDITVRTALIDMYAKCGEL+TSR LFNSMEERDVIL NVMISN
Sbjct: 552 LDKGEKIHQYIKENGFETDITVRTALIDMYAKCGELETSRTLFNSMEERDVILCNVMISN 611
Query: 541 YGMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEGRYLFDRMQKYGVKPS 600
YGMHG VESAIEIFQLME+SN+KPN LTFLSLLSACNH GH+VEGR LFD M KYG+KPS
Sbjct: 612 YGMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHMVEGRRLFDVMHKYGIKPS 671
Query: 601 LKHYASMVDLLGRSGSLQEAETLVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRIARHAI 660
LKHYASMVDLLGRSGSL+EAE LV+SMPI PDGTVWGSLLSACKLHNEFEMG+RIARHAI
Sbjct: 672 LKHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAI 731
Query: 661 ESDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWSAL 708
ESDP+NDGYYI LSDLYGCLGRWEEVEKVRG+MK+RGVEK AGWSAL
Sbjct: 732 ESDPKNDGYYIVLSDLYGCLGRWEEVEKVRGLMKQRGVEKRAGWSAL 777
BLAST of Lcy04g016660 vs. NCBI nr
Match:
XP_022944467.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 1259.6 bits (3258), Expect = 0.0e+00
Identity = 611/707 (86.42%), Postives = 650/707 (91.94%), Query Frame = 0
Query: 1 MSFYASHRQPAFSTQLFRSIHPKDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQ 60
M+FYA H QPAFSTQLFR +HPKD FLWNSIIQSHFSNGDY+QAFDFYL+MRASSSLPNQ
Sbjct: 72 MAFYACHGQPAFSTQLFRFVHPKDKFLWNSIIQSHFSNGDYLQAFDFYLEMRASSSLPNQ 131
Query: 61 FTAPMVVSTCAELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLFD 120
FT PMVVSTCAELMMLNHGMNIHGLALKLGLF GNSAVGSSL+YMYSKCG ESASL+F+
Sbjct: 132 FTIPMVVSTCAELMMLNHGMNIHGLALKLGLFVGNSAVGSSLIYMYSKCGNAESASLMFN 191
Query: 121 EITVKDVVAWTALIVGHVQNNESEKGLKCLHQMHRNGETPNYRTLGGGFQACVDMDALVE 180
EITVKDVVAWTALI+G+VQNNESEKGLKCL +MHRNG TPNYRT+GGGFQACVD+DALVE
Sbjct: 192 EITVKDVVAWTALIIGYVQNNESEKGLKCLFEMHRNGCTPNYRTIGGGFQACVDLDALVE 251
Query: 181 GRCLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSIISVHAK 240
GRCLHGLALKSG LCFEVV+SSILSMYSRCGSPEEAY CF KL QKDLISWTSII+VH+K
Sbjct: 252 GRCLHGLALKSGFLCFEVVKSSILSMYSRCGSPEEAYRCFFKLEQKDLISWTSIIAVHSK 311
Query: 241 FGLMTECLHLFWEMLAGEIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQCCAVSQIT 300
GLM+ECLHLFWEM A IIPD+I ISCMLLGFGN DRISEG AFH WIL+QC AVS I
Sbjct: 312 LGLMSECLHLFWEMQASGIIPDDIVISCMLLGFGNFDRISEGNAFHAWILKQCYAVSGI- 371
Query: 301 TQNALLSMYCKFGLLSTAEKIFHSFRKSSEDWNTMILGYSNMGQKEKCIDFFREMQLLGI 360
T NALLSMYCKFGLL TA+KIFHSF KSSEDWNTMILGYSNMG+KEKCIDFFREM LLGI
Sbjct: 372 THNALLSMYCKFGLLRTADKIFHSFHKSSEDWNTMILGYSNMGEKEKCIDFFREMHLLGI 431
Query: 361 EPDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKIGNLATAWR 420
EPDL SLVSVISSC V AVNIGRS+HCYAIKNSII NVSIANSLLDMYGK GNL AWR
Sbjct: 432 EPDLNSLVSVISSCLPVRAVNIGRSVHCYAIKNSIIDNVSIANSLLDMYGKSGNLTAAWR 491
Query: 421 IFHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVLSACAHLAS 480
IFH TQQ+D++SWNTLISSY+Q GHP+EAI LFDKM+KE FNPN VTCVI LSACAHLAS
Sbjct: 492 IFHRTQQKDIVSWNTLISSYKQSGHPSEAIDLFDKMIKEKFNPNVVTCVIALSACAHLAS 551
Query: 481 LDKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVILWNVMISN 540
LDKG +IHQYIKE+G ETDITVRTALIDMYAKCGEL++SR LFNSMEERDVIL NVMISN
Sbjct: 552 LDKGLKIHQYIKENGCETDITVRTALIDMYAKCGELESSRTLFNSMEERDVILCNVMISN 611
Query: 541 YGMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEGRYLFDRMQKYGVKPS 600
YGMHG VESAIEIFQLME+SN+KPN LTFLSLLSACNH GH+VEGR LFD M KYG+KPS
Sbjct: 612 YGMHGHVESAIEIFQLMEDSNIKPNALTFLSLLSACNHAGHIVEGRRLFDVMHKYGIKPS 671
Query: 601 LKHYASMVDLLGRSGSLQEAETLVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRIARHAI 660
LKHYASMVDLLGRSGSL+EAE LV+SMPI PDGTVWGSLLSACKLHNEFEMG+RIARHAI
Sbjct: 672 LKHYASMVDLLGRSGSLEEAEALVLSMPITPDGTVWGSLLSACKLHNEFEMGIRIARHAI 731
Query: 661 ESDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWSAL 708
ESDP+NDGYYI LSDLYGCLGRWEEVEKVRGMMKERGVEK AGWSAL
Sbjct: 732 ESDPKNDGYYIVLSDLYGCLGRWEEVEKVRGMMKERGVEKRAGWSAL 777
BLAST of Lcy04g016660 vs. TAIR 10
Match:
AT4G39952.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 756.5 bits (1952), Expect = 1.9e-218
Identity = 373/712 (52.39%), Postives = 501/712 (70.37%), Query Frame = 0
Query: 1 MSFYASHRQPAFSTQLFRSIHPKDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQ 60
+S YAS+ +P S+++F + +D FLWNSII++HFSNGDY ++ F+ M S P+
Sbjct: 66 ISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDH 125
Query: 61 FTAPMVVSTCAELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLFD 120
FTAPMVVS CAEL+ + G +HGL LK G F N+AVG+S VY YSKCG + A L+FD
Sbjct: 126 FTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFD 185
Query: 121 EITVKDVVAWTALIVGHVQNNESEKGLKCLHQMHRNG---ETPNYRTLGGGFQACVDMDA 180
E+ +DVVAWTA+I GHVQN ESE GL L +MH G + PN RTL GFQAC ++ A
Sbjct: 186 EMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGA 245
Query: 181 LVEGRCLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSIISV 240
L EGRCLHG A+K+G+ + V+SS+ S YS+ G+P EAY F +L +D+ SWTSII+
Sbjct: 246 LKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIAS 305
Query: 241 HAKFGLMTECLHLFWEMLAGEIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQCCAVS 300
A+ G M E +FWEM + PD + ISC++ G + +GKAFHG+++R C ++
Sbjct: 306 LARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLD 365
Query: 301 QITTQNALLSMYCKFGLLSTAEKIF--HSFRKSSEDWNTMILGYSNMGQKEKCIDFFREM 360
T N+LLSMYCKF LLS AEK+F S + E WNTM+ GY M KCI+ FR++
Sbjct: 366 S-TVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKI 425
Query: 361 QLLGIEPDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKIGNL 420
Q LGIE D S SVISSCS +GAV +G+S+HCY +K S+ +S+ NSL+D+YGK+G+L
Sbjct: 426 QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDL 485
Query: 421 ATAWRIFHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVLSAC 480
AWR+F +VI+WN +I+SY +AI LFD+MV ENF P+ +T V +L AC
Sbjct: 486 TVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMAC 545
Query: 481 AHLASLDKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVILWN 540
+ SL++G+ IH+YI E+ E ++++ ALIDMYAKCG L+ SR+LF++ ++D + WN
Sbjct: 546 VNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWN 605
Query: 541 VMISNYGMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEGRYLFDRMQKY 600
VMIS YGMHGDVESAI +F MEES+VKP TFL+LLSAC H G V +G+ LF +M +Y
Sbjct: 606 VMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQY 665
Query: 601 GVKPSLKHYASMVDLLGRSGSLQEAETLVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRI 660
VKP+LKHY+ +VDLL RSG+L+EAE+ V+SMP +PDG +WG+LLS+C H EFEMG+R+
Sbjct: 666 DVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRM 725
Query: 661 ARHAIESDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWSAL 708
A A+ SDP+NDGYYI L+++Y G+WEE E+ R MM+E GV K AG S +
Sbjct: 726 AERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
BLAST of Lcy04g016660 vs. TAIR 10
Match:
AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 443.4 bits (1139), Expect = 3.5e-124
Identity = 234/705 (33.19%), Postives = 412/705 (58.44%), Query Frame = 0
Query: 4 YASHRQPAFSTQLFRSIHP-KDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQFT 63
Y+ R+PA S +FR + P K+ +LWNSII++ NG + +A +FY ++R S P+++T
Sbjct: 49 YSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYT 108
Query: 64 APMVVSTCAELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLFDEI 123
P V+ CA L G ++ L +G F + VG++LV MYS+ G A +FDE+
Sbjct: 109 FPSVIKACAGLFDAEMGDLVYEQILDMG-FESDLFVGNALVDMYSRMGLLTRARQVFDEM 168
Query: 124 TVKDVVAWTALIVGHVQNNESEKGLKCLHQMHRNGETPNYRTLGGGFQACVDMDALVEGR 183
V+D+V+W +LI G+ + E+ L+ H++ + P+ T+ A ++ + +G+
Sbjct: 169 PVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 228
Query: 184 CLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSIISVHAKFG 243
LHG ALKSG+ VV + +++MY + P +A F +++ +D +S+ ++I + K
Sbjct: 229 GLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLE 288
Query: 244 LMTECLHLFWEMLAGEIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQCCAVSQITTQ 303
++ E + +F E L + PD + +S +L G+ +S K + ++L+ V + T +
Sbjct: 289 MVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK-AGFVLESTVR 348
Query: 304 NALLSMYCKFGLLSTAEKIFHSFR-KSSEDWNTMILGYSNMGQKEKCIDFFREMQLLGIE 363
N L+ +Y K G + TA +F+S K + WN++I GY G + + F+ M ++ +
Sbjct: 349 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 408
Query: 364 PDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKIGNLATAWRI 423
D I+ + +IS +++ + G+ +H IK+ I ++S++N+L+DMY K G + + +I
Sbjct: 409 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 468
Query: 424 FHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVLSACAHLASL 483
F S D ++WNT+IS+ + G A + + +M K P+ T ++ L CA LA+
Sbjct: 469 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 528
Query: 484 DKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVILWNVMISNY 543
G+ IH + G+E+++ + ALI+MY+KCG L+ S ++F M RDV+ W MI Y
Sbjct: 529 RLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAY 588
Query: 544 GMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEGRYLFDRMQ-KYGVKPS 603
GM+G+ E A+E F ME+S + P+ + F++++ AC+H+G V EG F++M+ Y + P
Sbjct: 589 GMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPM 648
Query: 604 LKHYASMVDLLGRSGSLQEAETLVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRIARHAI 663
++HYA +VDLL RS + +AE + +MPI PD ++W S+L AC+ + E R++R I
Sbjct: 649 IEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRII 708
Query: 664 ESDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWS 706
E +P++ GY I S+ Y L +W++V +R +K++ + K G+S
Sbjct: 709 ELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYS 750
BLAST of Lcy04g016660 vs. TAIR 10
Match:
AT1G69350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 434.9 bits (1117), Expect = 1.3e-121
Identity = 235/706 (33.29%), Postives = 393/706 (55.67%), Query Frame = 0
Query: 4 YASHRQPAFSTQLFRSIHPKDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQFTA 63
YA P S +F + D F++ +I+ + A D Y ++ + ++ ++F
Sbjct: 44 YAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVF 103
Query: 64 PMVVSTCA-ELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLFDEI 123
P V+ CA L+ G +HG +K G+ ++ + +SL+ MY + G A +FD +
Sbjct: 104 PSVLRACAGSREHLSVGGKVHGRIIKGGV-DDDAVIETSLLCMYGQTGNLSDAEKVFDGM 163
Query: 124 TVKDVVAWTALIVGHVQNNESEKGLKCLHQMHRNGETPNYRTLGGGFQACVDMDALVEGR 183
V+D+VAW+ L+ ++N E K L+ M +G P+ T+ + C ++ L R
Sbjct: 164 PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 223
Query: 184 CLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSIISVHAKFG 243
+HG + E + +S+L+MYS+CG + F K+ +K+ +SWT++IS + +
Sbjct: 224 SVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGE 283
Query: 244 LMTECLHLFWEMLAGEIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQCCAVSQITTQ 303
+ L F EM+ I P+ + + +L G I EGK+ HG+ +R+ + +
Sbjct: 284 FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLS 343
Query: 304 NALLSMYCKFGLLSTAEKIFHSFR-KSSEDWNTMILGYSNMGQKEKCIDFFREMQLLGIE 363
AL+ +Y + G LS E + ++ WN++I Y++ G + + FR+M I+
Sbjct: 344 LALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIK 403
Query: 364 PDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKIGNLATAWRI 423
PD +L S IS+C G V +G+ IH + I+ + + + NSL+DMY K G++ +A +
Sbjct: 404 PDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTV 463
Query: 424 FHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVLSACAHLASL 483
F+ + R V++WN+++ + Q G+ EAI LFD M N VT + V+ AC+ + SL
Sbjct: 464 FNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSL 523
Query: 484 DKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVILWNVMISNY 543
+KG+ +H + SG + D+ TALIDMYAKCG+L + +F +M R ++ W+ MI+ Y
Sbjct: 524 EKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAY 583
Query: 544 GMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEGRYLFDRMQKYGVKPSL 603
GMHG + SAI F M ES KPNE+ F+++LSAC H+G V EG+Y F+ M+ +GV P+
Sbjct: 584 GMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNS 643
Query: 604 KHYASMVDLLGRSGSLQEAETLVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRIARHAIE 663
+H+A +DLL RSG L+EA + MP D +VWGSL++ C++H + ++ I +
Sbjct: 644 EHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSD 703
Query: 664 SDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWSAL 708
++ GYY LS++Y G WEE ++R MK ++K G+SA+
Sbjct: 704 IVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAI 746
BLAST of Lcy04g016660 vs. TAIR 10
Match:
AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 411.4 bits (1056), Expect = 1.5e-114
Identity = 234/715 (32.73%), Postives = 393/715 (54.97%), Query Frame = 0
Query: 1 MSFYASHRQPAFSTQLFRSIHPKDGFLWNSIIQSHFSNGDYVQAFDFYLQMRASSS-LPN 60
++ YA P S +F ++ K+ F WN++I S+ N Y + + +++M +++ LP+
Sbjct: 127 ITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPD 186
Query: 61 QFTAPMVVSTCAELMMLNHGMNIHGLALKLGLFAGNSAVGSSLVYMYSKCGRTESASLLF 120
FT P V+ CA + + G+ +HGL +K GL + VG++LV Y G A LF
Sbjct: 187 HFTYPCVIKACAGMSDVGIGLAVHGLVVKTGL-VEDVFVGNALVSFYGTHGFVTDALQLF 246
Query: 121 DEITVKDVVAWTALIVGHVQNNESEKGLKCL-HQMHRNGE---TPNYRTLGGGFQACVDM 180
D + +++V+W ++I N SE+ L M NG+ P+ TL C
Sbjct: 247 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 306
Query: 181 DALVEGRCLHGLALKSGILCFEVVRSSILSMYSRCGSPEEAYSCFCKLNQKDLISWTSII 240
+ G+ +HG A+K + V+ ++++ MYS+CG A F N K+++SW +++
Sbjct: 307 REIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 366
Query: 241 SVHAKFGLMTECLHLFWEMLAG--EIIPDEIAISCMLLGFGNSDRISEGKAFHGWILRQC 300
+ G + +MLAG ++ DE+ I + + + K H + L+Q
Sbjct: 367 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 426
Query: 301 CAVSQITTQNALLSMYCKFGLLSTAEKIFHSFR-KSSEDWNTMILGYSNMGQKEKCIDFF 360
+++ NA ++ Y K G LS A+++FH R K+ WN +I G++ +D
Sbjct: 427 FVYNELVA-NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAH 486
Query: 361 REMQLLGIEPDLISLVSVISSCSQVGAVNIGRSIHCYAIKNSIIGNVSIANSLLDMYGKI 420
+M++ G+ PD ++ S++S+CS++ ++ +G+ +H + I+N + ++ + S+L +Y
Sbjct: 487 LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 546
Query: 421 GNLATAWRIFHSTQQRDVISWNTLISSYRQRGHPAEAIILFDKMVKENFNPNPVTCVIVL 480
G L T +F + + + ++SWNT+I+ Y Q G P A+ +F +MV ++ + V
Sbjct: 547 GELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVF 606
Query: 481 SACAHLASLDKGERIHQYIKESGFETDITVRTALIDMYAKCGELQTSRKLFNSMEERDVI 540
AC+ L SL G H Y + E D + +LIDMYAK G + S K+FN ++E+
Sbjct: 607 GACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTA 666
Query: 541 LWNVMISNYGMHGDVESAIEIFQLMEESNVKPNELTFLSLLSACNHTGHVVEG-RYLFDR 600
WN MI YG+HG + AI++F+ M+ + P++LTFL +L+ACNH+G + EG RYL
Sbjct: 667 SWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQM 726
Query: 601 MQKYGVKPSLKHYASMVDLLGRSGSLQEAETLVV-SMPIAPDGTVWGSLLSACKLHNEFE 660
+G+KP+LKHYA ++D+LGR+G L +A +V M D +W SLLS+C++H E
Sbjct: 727 KSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 786
Query: 661 MGVRIARHAIESDPENDGYYITLSDLYGCLGRWEEVEKVRGMMKERGVEKTAGWS 706
MG ++A E +PE Y+ LS+LY LG+WE+V KVR M E + K AG S
Sbjct: 787 MGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCS 839
BLAST of Lcy04g016660 vs. TAIR 10
Match:
AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 411.4 bits (1056), Expect = 1.5e-114
Identity = 230/683 (33.67%), Postives = 373/683 (54.61%), Query Frame = 0
Query: 28 WNSIIQSHFSNGDYVQAFDFYLQMRASSSLPNQFTAPMVVSTCAELMMLNHGMNIHGLAL 87
WNSII S NG QA FY +M P+ T P +V C L +
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165
Query: 88 KLGLFAGNSAVGSSLVYMYSKCGRTESASLLFDEITVKDVVAWTALIVGHVQNNESEKGL 147
LG+ N V SSL+ Y + G+ + S LFD + KD V W ++ G+ + + +
Sbjct: 166 SLGMDC-NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 225
Query: 148 KCLHQMHRNGETPNYRTLGGGFQACVDMDALVEGRCLHGLALKSGILCFEVVRSSILSMY 207
K M + +PN T C + G LHGL + SG+ +++S+LSMY
Sbjct: 226 KGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY 285
Query: 208 SRCGSPEEAYSCFCKLNQKDLISWTSIISVHAKFGLMTECLHLFWEMLAGEIIPDEIAIS 267
S+CG ++A F +++ D ++W +IS + + GLM E L F+EM++ ++PD I S
Sbjct: 286 SKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFS 345
Query: 268 CMLLGFGNSDRISEGKAFHGWILRQCCAVSQITTQNALLSMYCKFGLLSTAEKIFHSFRK 327
+L + + K H +I+R ++ T +AL+ Y K +S A+ IF +
Sbjct: 346 SLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLT-SALIDAYFKCRGVSMAQNIFS--QC 405
Query: 328 SSED---WNTMILGYSNMGQKEKCIDFFREMQLLGIEPDLISLVSVISSCSQVGAVNIGR 387
+S D + MI GY + G ++ FR + + I P+ I+LVS++ + A+ +GR
Sbjct: 406 NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGR 465
Query: 388 SIHCYAIKNSIIGNVSIANSLLDMYGKIGNLATAWRIFHSTQQRDVISWNTLISSYRQRG 447
+H + IK +I +++DMY K G + A+ IF +RD++SWN++I+ Q
Sbjct: 466 ELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSD 525
Query: 448 HPAEAIILFDKMVKENFNPNPVTCVIVLSACAHLASLDKGERIHQYIKESGFETDITVRT 507
+P+ AI +F +M + V+ LSACA+L S G+ IH ++ + +D+ +
Sbjct: 526 NPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSES 585
Query: 508 ALIDMYAKCGELQTSRKLFNSMEERDVILWNVMISNYGMHGDVESAIEIF-QLMEESNVK 567
LIDMYAKCG L+ + +F +M+E++++ WN +I+ G HG ++ ++ +F +++E+S ++
Sbjct: 586 TLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIR 645
Query: 568 PNELTFLSLLSACNHTGHVVEG-RYLFDRMQKYGVKPSLKHYASMVDLLGRSGSLQEAET 627
P+++TFL ++S+C H G V EG R+ + YG++P +HYA +VDL GR+G L EA
Sbjct: 646 PDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYE 705
Query: 628 LVVSMPIAPDGTVWGSLLSACKLHNEFEMGVRIARHAIESDPENDGYYITLSDLYGCLGR 687
V SMP PD VWG+LL AC+LH E+ + ++ DP N GYY+ +S+ +
Sbjct: 706 TVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANARE 765
Query: 688 WEEVEKVRGMMKERGVEKTAGWS 706
WE V KVR +MKER V+K G+S
Sbjct: 766 WESVTKVRSLMKEREVQKIPGYS 784
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q3E9N1 | 2.7e-217 | 52.39 | Pentatricopeptide repeat-containing protein At4g39952, mitochondrial OS=Arabidop... | [more] |
| Q9SS60 | 5.0e-123 | 33.19 | Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX... | [more] |
| Q9C507 | 1.8e-120 | 33.29 | Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS... | [more] |
| Q9STE1 | 2.1e-113 | 33.67 | Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX... | [more] |
| Q0WN60 | 2.1e-113 | 32.73 | Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DLQ3 | 0.0e+00 | 87.99 | pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X1 ... | [more] |
| A0A6J1JGK6 | 0.0e+00 | 86.56 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mito... | [more] |
| A0A6J1FVR1 | 0.0e+00 | 86.42 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mito... | [more] |
| A0A1S3C9K9 | 0.0e+00 | 83.03 | pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X1 ... | [more] |
| A0A1S4E2D5 | 0.0e+00 | 83.03 | pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X2 ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022154319.1 | 0.0e+00 | 87.99 | pentatricopeptide repeat-containing protein At4g39952, mitochondrial isoform X1 ... | [more] |
| XP_022986468.1 | 0.0e+00 | 86.56 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mito... | [more] |
| KAG7010985.1 | 0.0e+00 | 86.70 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
| XP_023513090.1 | 0.0e+00 | 86.42 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mito... | [more] |
| XP_022944467.1 | 0.0e+00 | 86.42 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g39952, mito... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G39952.1 | 1.9e-218 | 52.39 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G03580.1 | 3.5e-124 | 33.19 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G69350.1 | 1.3e-121 | 33.29 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G18485.1 | 1.5e-114 | 32.73 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G21300.1 | 1.5e-114 | 33.67 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
