Lcy04g016270 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g016270
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	TPR_REGION domain-containing protein
Location	Chr04: 48534456 .. 48535540 (+)
RNA-Seq Expression	Lcy04g016270
Synteny	Lcy04g016270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAGACCTACAGAGTTTAGTTTAGATTCAGCTCCACAACCAGAGATCCATCCAGGACTTCAACGAGAGGATGTCGCCGGAAGCCATGATACAAGTAGCTCTGTTCATCCTCACAGCAGCAACGATGTTCACCGTACGAGAACTTTCCAAACGAGCATTCGGCAAGGTCCGCCATAAGAATCGCGCGATCCTCCAATCGAGCCGCCACTTCTTCGAGGGAACTCATCTACTCGCTCGAGCGCGATCAATTTCTCAACAATCTCAATCGATCGACTACGCGAAGAAGGCACTAATCGAAGCCGAAACGGCGCTTTCCCTTTCCCCAAGAGATCCGGCATCTCACATCTTGAAAGCCCTAGCCCTAGATCACATGGGCCACCAGAGCTCCGCTCTTAAATCACTAGACGTTGCACTTTCTCCGCCGTGCTTGAAGTCACTATCAGAGAAAGAGCTCGCAAAGGCGTTGATGAAGAGAGCCGAATTGAAGATTGCCGTCAACCGGAAACGGCGACTCGACTCGGCGGTGGAAGACTTGTTAGAGGCGGTGAGTTTGGTCGGAGATGACTCGAAGGCCTTCTGTTTGTTGGGTCAATGTTACGAGTGGAAGGAAATGAAAGATGAGGCCCGGCAGGCTTTCGAGAAGGCTCTAACCGTGGATCCTGAATCAGGCCCGGCCCGCGAGGGATTGGACCGGTTGAATTGAGGCCCGTTTACCATTTCGGTCTCTTCCGAATGGGCCTGGTAAAAATATGTCAAACATGGGCCTCGGTGGCCCACCTATGGGAATCAGCTGGAGTCGTGGCGTATAACGCGTAATAAGAAGATAGCTGAATATTATTTCTGTTTTGATGAAGTTCCTATGAATATTTAATTATTTTGATGTATGTCAGTTGTCAAGTTTGTAAGCGACCTGCAGGAAAAAAACTGTAATATGGATTGATATAGACATAATTTTTTTAAAAAAAAGATGAATATAGACTTAATTTAAGAGCATTATTTAGTATTTTCTTTAATAAATAAATGTTAAAAAATAATGAAGAAAAGAAACAAGAAGGGCAAAAGAGATTAAAATCTCATAGCATATT

mRNA sequence

CAAAGACCTACAGAGTTTAGTTTAGATTCAGCTCCACAACCAGAGATCCATCCAGGACTTCAACGAGAGGATGTCGCCGGAAGCCATGATACAAGTAGCTCTGTTCATCCTCACAGCAGCAACGATGTTCACCGTACGAGAACTTTCCAAACGAGCATTCGGCAAGGTCCGCCATAAGAATCGCGCGATCCTCCAATCGAGCCGCCACTTCTTCGAGGGAACTCATCTACTCGCTCGAGCGCGATCAATTTCTCAACAATCTCAATCGATCGACTACGCGAAGAAGGCACTAATCGAAGCCGAAACGGCGCTTTCCCTTTCCCCAAGAGATCCGGCATCTCACATCTTGAAAGCCCTAGCCCTAGATCACATGGGCCACCAGAGCTCCGCTCTTAAATCACTAGACGTTGCACTTTCTCCGCCGTGCTTGAAGTCACTATCAGAGAAAGAGCTCGCAAAGGCGTTGATGAAGAGAGCCGAATTGAAGATTGCCGTCAACCGGAAACGGCGACTCGACTCGGCGGTGGAAGACTTGTTAGAGGCGGTGAGTTTGGTCGGAGATGACTCGAAGGCCTTCTGTTTGTTGGGTCAATGTTACGAGTGGAAGGAAATGAAAGATGAGGCCCGGCAGGCTTTCGAGAAGGCTCTAACCGTGGATCCTGAATCAGGCCCGGCCCGCGAGGGATTGGACCGGTTGAATTGAGGCCCGTTTACCATTTCGGTCTCTTCCGAATGGGCCTGGTAAAAATATGTCAAACATGGGCCTCGGTGGCCCACCTATGGGAATCAGCTGGAGTCGTGGCGTATAACGCGTAATAAGAAGATAGCTGAATATTATTTCTGTTTTGATGAAGTTCCTATGAATATTTAATTATTTTGATGTATGTCAGTTGTCAAGTTTGTAAGCGACCTGCAGGAAAAAAACTGTAATATGGATTGATATAGACATAATTTTTTTAAAAAAAAGATGAATATAGACTTAATTTAAGAGCATTATTTAGTATTTTCTTTAATAAATAAATGTTAAAAAATAATGAAGAAAAGAAACAAGAAGGGCAAAAGAGATTAAAATCTCATAGCATATT

Coding sequence (CDS)

ATGTCGCCGGAAGCCATGATACAAGTAGCTCTGTTCATCCTCACAGCAGCAACGATGTTCACCGTACGAGAACTTTCCAAACGAGCATTCGGCAAGGTCCGCCATAAGAATCGCGCGATCCTCCAATCGAGCCGCCACTTCTTCGAGGGAACTCATCTACTCGCTCGAGCGCGATCAATTTCTCAACAATCTCAATCGATCGACTACGCGAAGAAGGCACTAATCGAAGCCGAAACGGCGCTTTCCCTTTCCCCAAGAGATCCGGCATCTCACATCTTGAAAGCCCTAGCCCTAGATCACATGGGCCACCAGAGCTCCGCTCTTAAATCACTAGACGTTGCACTTTCTCCGCCGTGCTTGAAGTCACTATCAGAGAAAGAGCTCGCAAAGGCGTTGATGAAGAGAGCCGAATTGAAGATTGCCGTCAACCGGAAACGGCGACTCGACTCGGCGGTGGAAGACTTGTTAGAGGCGGTGAGTTTGGTCGGAGATGACTCGAAGGCCTTCTGTTTGTTGGGTCAATGTTACGAGTGGAAGGAAATGAAAGATGAGGCCCGGCAGGCTTTCGAGAAGGCTCTAACCGTGGATCCTGAATCAGGCCCGGCCCGCGAGGGATTGGACCGGTTGAATTGA

Protein sequence

MSPEAMIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQSSALKSLDVALSPPCLKSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKEMKDEARQAFEKALTVDPESGPAREGLDRLN

Homology

[Close]

BLAST of Lcy04g016270 vs. ExPASy TrEMBL
Match: A0A6J1GFZ7 (uncharacterized protein LOC111453603 OS=Cucurbita moschata OX=3662 GN=LOC111453603 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 6.7e-95
Identity = 192/210 (91.43%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSI 60
           MSPEAMIQVALFILTAATM  VRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARS 
Sbjct: 2   MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61

Query: 61  SQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
           SQQSQS+DYAKKAL EAETALSLSPRDPASHILKALAL+HMGH SSALKSLDVALSPPCL
Sbjct: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 121

Query: 121 KSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKE 180
           KSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+
Sbjct: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKK 181

Query: 181 MKDEARQAFEKALTVDPESGPAREGLDRLN 211
           MKDEARQAFEKALTVDPES PARE L RLN
Sbjct: 182 MKDEARQAFEKALTVDPESAPAREALGRLN 211

[Close]

BLAST of Lcy04g016270 vs. ExPASy TrEMBL
Match: A0A6J1IRB2 (uncharacterized protein LOC111478668 OS=Cucurbita maxima OX=3661 GN=LOC111478668 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.5e-94
Identity = 190/210 (90.48%), Postives = 200/210 (95.24%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSI 60
           MSPEA+IQVALFILTAATM  VRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARSI
Sbjct: 2   MSPEAVIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSI 61

Query: 61  SQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
           SQQSQS+DYAKKA+ EAETALSLSPRDPASHILKALAL+HMGH SSALKSLD+ALSPPCL
Sbjct: 62  SQQSQSMDYAKKAVNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDIALSPPCL 121

Query: 121 KSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKE 180
           KSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+
Sbjct: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKK 181

Query: 181 MKDEARQAFEKALTVDPESGPAREGLDRLN 211
           MKDEARQAFEKALTVDPES PARE L RLN
Sbjct: 182 MKDEARQAFEKALTVDPESAPAREALGRLN 211

[Close]

BLAST of Lcy04g016270 vs. ExPASy TrEMBL
Match: A0A6J1BSI1 (uncharacterized protein LOC111005306 OS=Momordica charantia OX=3673 GN=LOC111005306 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.7e-93
Identity = 188/210 (89.52%), Postives = 195/210 (92.86%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSI 60
           MSPEAMIQVALFILTAAT+  VRELSKRAFGKVR KNRAILQSSRHFFEGTHLLARARS 
Sbjct: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60

Query: 61  SQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
           SQQSQS DYAKKAL EAETALSLSP+DPASHILKALALDHMGHQSSALKSLDVALSPPCL
Sbjct: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120

Query: 121 KSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKE 180
           KSLS +EL KAL+KRAELKIAVNRKRRLDSAVEDLLEAV L   D K FCLLGQCYEWK+
Sbjct: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ 180

Query: 181 MKDEARQAFEKALTVDPESGPAREGLDRLN 211
           MKDEA+QAFEKALTVDPES PAREGL+RLN
Sbjct: 181 MKDEAKQAFEKALTVDPESSPAREGLERLN 210

[Close]

BLAST of Lcy04g016270 vs. ExPASy TrEMBL
Match: A0A6J5V4N0 (TPR_REGION domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS39230 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.4e-63
Identity = 135/212 (63.68%), Postives = 170/212 (80.19%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSI 60
           M+PE ++Q+ L ILT A  F + ++S++A  K+R  NRA LQS+RHF +G+HLL RARS 
Sbjct: 1   MAPEVVLQLGLLILTLAMFFAIHKISRKALTKLRTNNRANLQSTRHFVQGSHLLTRARSN 60

Query: 61  SQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
             ++QS  +AK AL EAE AL+LSPRDP  HILKALALD +GH++SALKS DVALSPPC+
Sbjct: 61  PHKAQSQAHAKNALTEAEKALALSPRDPGPHILKALALDLLGHKTSALKSFDVALSPPCV 120

Query: 121 KSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSL---VGDDSKAFCLLGQCYE 180
           KSLSE+E  +AL+KRAELKI +NR+RR+DSAVEDL++AVSL    GDD  +FCLLGQCYE
Sbjct: 121 KSLSERERGEALVKRAELKIGLNRRRRVDSAVEDLVQAVSLSRGEGDDVTSFCLLGQCYE 180

Query: 181 WKEMKDEARQAFEKALTVDPESGPAREGLDRL 210
           WK MK+EAR+AFE+AL  +P S  AR+GLDRL
Sbjct: 181 WKGMKEEAREAFERALRAEPGSVLARQGLDRL 212

[Close]

BLAST of Lcy04g016270 vs. ExPASy TrEMBL
Match: A0A5E4EZ55 (PREDICTED OS=Prunus dulcis OX=3755 GN=ALMOND_2B009325 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 5.2e-63
Identity = 134/212 (63.21%), Postives = 169/212 (79.72%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSI 60
           M+PE ++Q+ L ILT A  F + ++S++A  K+R  NRA LQS+RHF +G+HLL RARS 
Sbjct: 1   MAPEVVLQLGLLILTLAMFFAIHKISRKALTKLRTNNRANLQSTRHFVQGSHLLTRARSN 60

Query: 61  SQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
             ++QS  +AK AL EAE AL+LSPRDP  HILKALALD +GH++SALKS DVALSPPC+
Sbjct: 61  PHKAQSQAHAKNALTEAEKALALSPRDPGPHILKALALDLLGHKTSALKSFDVALSPPCV 120

Query: 121 KSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSL---VGDDSKAFCLLGQCYE 180
           KSLSE+E  +AL+KRAELKI +NR+RR+DSAVEDL++AV L    GDD  +FCLLGQCYE
Sbjct: 121 KSLSERERGEALVKRAELKIGLNRRRRVDSAVEDLVQAVRLSRGEGDDVTSFCLLGQCYE 180

Query: 181 WKEMKDEARQAFEKALTVDPESGPAREGLDRL 210
           WK MK+EAR+AFE+AL  +P S  AR+GLDRL
Sbjct: 181 WKGMKEEAREAFERALRAEPGSVLARQGLDRL 212

[Close]

BLAST of Lcy04g016270 vs. NCBI nr
Match: KAG6604067.1 (hypothetical protein SDJN03_04676, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 356.7 bits (914), Expect = 1.4e-94
Identity = 192/210 (91.43%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSI 60
           MSPEAMIQVALFILTAATM  VRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARS 
Sbjct: 48  MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 107

Query: 61  SQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
           SQQSQS+DYAKKAL EAETALSLSPRDPASHILKALAL+HMGH SSALKSLDVALSPPCL
Sbjct: 108 SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 167

Query: 121 KSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKE 180
           KSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+
Sbjct: 168 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKK 227

Query: 181 MKDEARQAFEKALTVDPESGPAREGLDRLN 211
           MKDEARQAFEKALTVDPES PARE L RLN
Sbjct: 228 MKDEARQAFEKALTVDPESAPAREALGRLN 257

[Close]

BLAST of Lcy04g016270 vs. NCBI nr
Match: XP_022950520.1 (uncharacterized protein LOC111453603 [Cucurbita moschata] >KAG7034235.1 hypothetical protein SDJN02_03962, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 356.7 bits (914), Expect = 1.4e-94
Identity = 192/210 (91.43%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSI 60
           MSPEAMIQVALFILTAATM  VRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARS 
Sbjct: 2   MSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61

Query: 61  SQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
           SQQSQS+DYAKKAL EAETALSLSPRDPASHILKALAL+HMGH SSALKSLDVALSPPCL
Sbjct: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDVALSPPCL 121

Query: 121 KSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKE 180
           KSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+
Sbjct: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKK 181

Query: 181 MKDEARQAFEKALTVDPESGPAREGLDRLN 211
           MKDEARQAFEKALTVDPES PARE L RLN
Sbjct: 182 MKDEARQAFEKALTVDPESAPAREALGRLN 211

[Close]

BLAST of Lcy04g016270 vs. NCBI nr
Match: XP_023543662.1 (uncharacterized protein LOC111803474 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 355.9 bits (912), Expect = 2.4e-94
Identity = 191/210 (90.95%), Postives = 200/210 (95.24%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSI 60
           +SPEAMIQVALFILTAATM  VRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARS 
Sbjct: 2   VSPEAMIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARST 61

Query: 61  SQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
           SQQSQS+DYAKKAL EAETALSLSPRDPASHILKALAL+HMGHQSSALKSLDVALSPPCL
Sbjct: 62  SQQSQSMDYAKKALNEAETALSLSPRDPASHILKALALNHMGHQSSALKSLDVALSPPCL 121

Query: 121 KSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKE 180
           KSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+
Sbjct: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKK 181

Query: 181 MKDEARQAFEKALTVDPESGPAREGLDRLN 211
           MKDEAR+AFEKALTVDPES PARE L RLN
Sbjct: 182 MKDEAREAFEKALTVDPESAPAREALGRLN 211

[Close]

BLAST of Lcy04g016270 vs. NCBI nr
Match: XP_022978825.1 (uncharacterized protein LOC111478668 [Cucurbita maxima])

HSP 1 Score: 355.5 bits (911), Expect = 3.1e-94
Identity = 190/210 (90.48%), Postives = 200/210 (95.24%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSI 60
           MSPEA+IQVALFILTAATM  VRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARSI
Sbjct: 2   MSPEAVIQVALFILTAATMLAVRELSKRAFGKVRLKNRAILQSSRHFLEGTHLLARARSI 61

Query: 61  SQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
           SQQSQS+DYAKKA+ EAETALSLSPRDPASHILKALAL+HMGH SSALKSLD+ALSPPCL
Sbjct: 62  SQQSQSMDYAKKAVNEAETALSLSPRDPASHILKALALNHMGHHSSALKSLDIALSPPCL 121

Query: 121 KSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKE 180
           KSLSEKE+AKAL+KRAELKIAVNRKRRLDSAVEDLL+AVSL GDD+KAFCLLGQCYEWK+
Sbjct: 122 KSLSEKEVAKALVKRAELKIAVNRKRRLDSAVEDLLQAVSLGGDDTKAFCLLGQCYEWKK 181

Query: 181 MKDEARQAFEKALTVDPESGPAREGLDRLN 211
           MKDEARQAFEKALTVDPES PARE L RLN
Sbjct: 182 MKDEARQAFEKALTVDPESAPAREALGRLN 211

[Close]

BLAST of Lcy04g016270 vs. NCBI nr
Match: XP_022132455.1 (uncharacterized protein LOC111005306 [Momordica charantia])

HSP 1 Score: 350.9 bits (899), Expect = 7.6e-93
Identity = 188/210 (89.52%), Postives = 195/210 (92.86%), Query Frame = 0


Query: 1   MSPEAMIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSI 60
           MSPEAMIQVALFILTAAT+  VRELSKRAFGKVR KNRAILQSSRHFFEGTHLLARARS 
Sbjct: 1   MSPEAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARST 60

Query: 61  SQQSQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120
           SQQSQS DYAKKAL EAETALSLSP+DPASHILKALALDHMGHQSSALKSLDVALSPPCL
Sbjct: 61  SQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDVALSPPCL 120

Query: 121 KSLSEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVGDDSKAFCLLGQCYEWKE 180
           KSLS +EL KAL+KRAELKIAVNRKRRLDSAVEDLLEAV L   D K FCLLGQCYEWK+
Sbjct: 121 KSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQ 180

Query: 181 MKDEARQAFEKALTVDPESGPAREGLDRLN 211
           MKDEA+QAFEKALTVDPES PAREGL+RLN
Sbjct: 181 MKDEAKQAFEKALTVDPESSPAREGLERLN 210

[Close]

BLAST of Lcy04g016270 vs. TAIR 10
Match: AT5G65520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-44
Identity = 102/198 (51.52%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 4   EAMIQVALFILTAATMFTVRELSKRAFGKVRHKNRAILQSSRHFFEGTHLLARARSISQQ 63
           E +IQ A+ +LT    + ++ LS+R   K R K+RA LQ+ R   + + LLARAR+  ++
Sbjct: 5   ETIIQGAILVLTLVMFWAIKYLSQRGLTKFRTKHRATLQTQRQLIQASRLLARARTTPKK 64

Query: 64  SQSIDYAKKALIEAETALSLSPRDPASHILKALALDHMGHQSSALKSLDVALSPPCLKSL 123
           SQS   AK AL EA+  +++SP D A HI++ALALD +GH +SALKS D+AL+ P LKSL
Sbjct: 65  SQSQSLAKTALTEADNVIAISPDDAAGHIVRALALDLLGHHTSALKSFDMALTYPRLKSL 124

Query: 124 SEKELAKALMKRAELKIAVNRKRRLDSAVEDLLEAVSLVG--DDSKAFCLLGQCYEWKEM 183
           S  E A AL+KRAE+K+AVNR+RR+DSAVEDL EAV L    D ++ F LLG+CYE+K +
Sbjct: 125 SVGERADALVKRAEMKLAVNRRRRIDSAVEDLEEAVRLAAGTDTARLFRLLGECYEFKGL 184

Query: 184 KDEARQAFEKALTVDPES 200
           K++A+ AF +AL   P S
Sbjct: 185 KEKAQWAFNEALKAQPSS 202

The following BLAST results are available for this feature:

BLAST of Lcy04g016270 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy04g016270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GFZ7	6.7e-95	91.43	uncharacterized protein LOC111453603 OS=Cucurbita moschata OX=3662 GN=LOC1114536...	[more]
A0A6J1IRB2	1.5e-94	90.48	uncharacterized protein LOC111478668 OS=Cucurbita maxima OX=3661 GN=LOC111478668...	[more]
A0A6J1BSI1	3.7e-93	89.52	uncharacterized protein LOC111005306 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J5V4N0	1.4e-63	63.68	TPR_REGION domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCU...	[more]
A0A5E4EZ55	5.2e-63	63.21	PREDICTED OS=Prunus dulcis OX=3755 GN=ALMOND_2B009325 PE=4 SV=1	[more]

BLAST of Lcy04g016270 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6604067.1	1.4e-94	91.43	hypothetical protein SDJN03_04676, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022950520.1	1.4e-94	91.43	uncharacterized protein LOC111453603 [Cucurbita moschata] >KAG7034235.1 hypothet...	[more]
XP_023543662.1	2.4e-94	90.95	uncharacterized protein LOC111803474 [Cucurbita pepo subsp. pepo]	[more]
XP_022978825.1	3.1e-94	90.48	uncharacterized protein LOC111478668 [Cucurbita maxima]	[more]
XP_022132455.1	7.6e-93	89.52	uncharacterized protein LOC111005306 [Momordica charantia]	[more]

BLAST of Lcy04g016270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65520.1	1.4e-44	51.52	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 166..199 e-value: 7.2E-6 score: 35.5
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 166..199 score: 10.8564
IPR001440	Tetratricopeptide repeat 1	PFAM	PF00515	TPR_1	coord: 167..198 e-value: 2.2E-7 score: 30.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 53..210 e-value: 1.4E-18 score: 69.1
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 71..199
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 5..208
None	No IPR available	PANTHER	PTHR26312:SF163	SUBFAMILY NOT NAMED	coord: 5..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g016270.1	Lcy04g016270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding