Lcy04g016070 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g016070
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Hydroxyproline-rich glycoprotein family protein
Location	Chr04: 48360941 .. 48361829 (+)
RNA-Seq Expression	Lcy04g016070
Synteny	Lcy04g016070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCTTCTTTCCTTCCCGATTTGGCATTGGAGTTTCCGCCATTTTCATTTCCTTTTCTTTCTCCCAACACATGACAGATTCCACATGGAGAGTCCCGATTTCTCCCCGCCTCACGCCGACGCATCCAGACCCTCCTTAGGGTTTCCCCTCGGCACGGCTCTGCTCCTTCTCGTCATCTTCACCTTGAGCGGAATCTTCTCCTGCTGTTACCACTGGGACAAACTCAGATCCCTCCGCCGTTCCGCTTCCCAACCCCTGGATCACGATCTTCACCTCCGATCCCCTCCATCCAAATCTAGCCCTACTTCTCTGGTAATTTCCCTGCTCCTTGATGTTTTCTTTCTTTTCATCGGTTTCTTTTTTCGAGTTTTTGATTGTTGAAACGAGGAATTGATTTTGTTGGAGCAGGATTTGGAGAAGAATCCAAGAGAGAGCTTATCGGTGTTGATGCCTGGAGATTCGGTTCCGAAGTTCATCGCGATGCCGTGCCCTAGGGAGCCGCCGCGGCCGGAGATGATTGAGGTGAAAGTGGAGAAGCCGCCGAAGCCGCCGCGAATTGCGGTTCCTTTCTATTAGCAGATTCAGATTCACCATTGATTGATCTGTGTACATAGTAGAACTAAATTAATTCTTTTTCAGTTTCATCTGTCGTCTTCCCTTAGGAAAGGGAATTTTAAGAGCTTCGAATTTCGATATGTATATTTTACAAGCACTTTCCTCACCAAAATTTTGTCTCTGCCTCTCGGCAGTTACAAATTTACCCAGAGAAAAAGGGAAAAGAAAAAAAAAAACCCTATAAATTATGATTTAGAAGCAATTTATTTTATTAATATTTTCAAAATCATCGTTATTATTATTTCTGCAGTTTAACAAAATAATTTGTGCC

mRNA sequence

CTTCTTCTTCTTTCCTTCCCGATTTGGCATTGGAGTTTCCGCCATTTTCATTTCCTTTTCTTTCTCCCAACACATGACAGATTCCACATGGAGAGTCCCGATTTCTCCCCGCCTCACGCCGACGCATCCAGACCCTCCTTAGGGTTTCCCCTCGGCACGGCTCTGCTCCTTCTCGTCATCTTCACCTTGAGCGGAATCTTCTCCTGCTGTTACCACTGGGACAAACTCAGATCCCTCCGCCGTTCCGCTTCCCAACCCCTGGATCACGATCTTCACCTCCGATCCCCTCCATCCAAATCTAGCCCTACTTCTCTGGATTTGGAGAAGAATCCAAGAGAGAGCTTATCGGTGTTGATGCCTGGAGATTCGGTTCCGAAGTTCATCGCGATGCCGTGCCCTAGGGAGCCGCCGCGGCCGGAGATGATTGAGGTGAAAGTGGAGAAGCCGCCGAAGCCGCCGCGAATTGCGGTTCCTTTCTATTAGCAGATTCAGATTCACCATTGATTGATCTGTGTACATAGTAGAACTAAATTAATTCTTTTTCAGTTTCATCTGTCGTCTTCCCTTAGGAAAGGGAATTTTAAGAGCTTCGAATTTCGATATGTATATTTTACAAGCACTTTCCTCACCAAAATTTTGTCTCTGCCTCTCGGCAGTTACAAATTTACCCAGAGAAAAAGGGAAAAGAAAAAAAAAAACCCTATAAATTATGATTTAGAAGCAATTTATTTTATTAATATTTTCAAAATCATCGTTATTATTATTTCTGCAGTTTAACAAAATAATTTGTGCC

Coding sequence (CDS)

ATGGAGAGTCCCGATTTCTCCCCGCCTCACGCCGACGCATCCAGACCCTCCTTAGGGTTTCCCCTCGGCACGGCTCTGCTCCTTCTCGTCATCTTCACCTTGAGCGGAATCTTCTCCTGCTGTTACCACTGGGACAAACTCAGATCCCTCCGCCGTTCCGCTTCCCAACCCCTGGATCACGATCTTCACCTCCGATCCCCTCCATCCAAATCTAGCCCTACTTCTCTGGATTTGGAGAAGAATCCAAGAGAGAGCTTATCGGTGTTGATGCCTGGAGATTCGGTTCCGAAGTTCATCGCGATGCCGTGCCCTAGGGAGCCGCCGCGGCCGGAGATGATTGAGGTGAAAGTGGAGAAGCCGCCGAAGCCGCCGCGAATTGCGGTTCCTTTCTATTAG

Protein sequence

MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLDHDLHLRSPPSKSSPTSLDLEKNPRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEKPPKPPRIAVPFY

Homology

[Close]

BLAST of Lcy04g016070 vs. ExPASy Swiss-Prot
Match: Q9LSK9 (Uncharacterized protein At5g65660 OS=Arabidopsis thaliana OX=3702 GN=At5g65660 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 4.7e-35
Identity = 79/132 (59.85%), Postives = 92/132 (69.70%), Query Frame = 0


Query: 5   DFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLDHDLHL 64
           DFSPPH DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLRRS +        +
Sbjct: 6   DFSPPHMDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKHRSLRRSLANGRP-SADI 65

Query: 65  RSPPSKSSPTSLDLEKNPRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEKPP--- 124
            S P K  P   +++K    S+ VLMPGD+ PKFIA+PCP  PPRPE + V V+ PP   
Sbjct: 66  ESNPYKPKPPFPEMKKPQNLSVPVLMPGDNTPKFIALPCPCAPPRPEKLTVDVQTPPQSP 125

Query: 125 --KPPRIAVPFY 132
             KP R  VP Y
Sbjct: 126 PVKPARFPVPLY 136

[Close]

BLAST of Lcy04g016070 vs. ExPASy TrEMBL
Match: A0A6J1HHX0 (uncharacterized protein At5g65660-like OS=Cucurbita moschata OX=3662 GN=LOC111463125 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.7e-57
Identity = 115/132 (87.12%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLDH 60
           ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q L H
Sbjct: 1   METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 60

Query: 61  DLH-LRSPPSKSSPTSLDLEKNPRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEK 120
           D H L S PSKS+ T+LDLEKN RESLSV+MPGDS+PKFIAMPCPREPPRPEMI VKVEK
Sbjct: 61  DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIHVKVEK 120

Query: 121 PPKPPRIAVPFY 132
           PPKPPRIA+PFY
Sbjct: 121 PPKPPRIAIPFY 132

[Close]

BLAST of Lcy04g016070 vs. ExPASy TrEMBL
Match: A0A6J1BVL2 (uncharacterized protein At5g65660 OS=Momordica charantia OX=3673 GN=LOC111005755 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.9e-57
Identity = 117/131 (89.31%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLDH 60
           MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ    
Sbjct: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ--HP 60

Query: 61  DLHLRSPPSKSSPTSLDLEKNPRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEKP 120
            LHL S PSKS+P SLDLE N R+SLSVLMPGDS+PKFIAMPCPREPPRPEMI+VKVEKP
Sbjct: 61  HLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMPCPREPPRPEMIQVKVEKP 120

Query: 121 PKPPRIAVPFY 132
           PKPPRIAVPFY
Sbjct: 121 PKPPRIAVPFY 129

[Close]

BLAST of Lcy04g016070 vs. ExPASy TrEMBL
Match: A0A6J1KQE2 (uncharacterized protein At5g65660-like OS=Cucurbita maxima OX=3661 GN=LOC111497312 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 114/132 (86.36%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLDH 60
           ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q L H
Sbjct: 60  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 119

Query: 61  DLH-LRSPPSKSSPTSLDLEKNPRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEK 120
           D H L S PSKS+ T+LDLEKN RESLSV+MPGDS+PKFIAMPCPREPPRPEMI+V VEK
Sbjct: 120 DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEK 179

Query: 121 PPKPPRIAVPFY 132
           PPKPPRIA+PFY
Sbjct: 180 PPKPPRIAIPFY 191

[Close]

BLAST of Lcy04g016070 vs. ExPASy TrEMBL
Match: A0A1S3B1W3 (uncharacterized protein At5g65660 OS=Cucumis melo OX=3656 GN=LOC103484911 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 9.4e-55
Identity = 116/133 (87.22%), Postives = 121/133 (90.98%), Query Frame = 0


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPL-- 60
           MESP+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS SQPL  
Sbjct: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSTSQPLRD 60

Query: 61  DHDLHLRSPPSKSSPTSLDLEKNPRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVE 120
            HDLH +SPPSKS+PT  DLEKN RESLSVLMPGDS+PKFIAMPCPREP RPEMIEVKVE
Sbjct: 61  RHDLHPQSPPSKSNPTQ-DLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPEMIEVKVE 120

Query: 121 KPPKPPRIAVPFY 132
           KP KP RIAVPFY
Sbjct: 121 KPLKPLRIAVPFY 132

[Close]

BLAST of Lcy04g016070 vs. ExPASy TrEMBL
Match: A0A0A0KGL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497240 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.0e-54
Identity = 116/133 (87.22%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPL-D 60
           MESP+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS+SQPL D
Sbjct: 1   MESPNFSPPHSDPSRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSSSQPLRD 60

Query: 61  H-DLHLRSPPSKSSPTSLDLEKNPRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVE 120
           H  LHL+SPPSKS+PT  DLEKN RESLSVLMPGDS+PKFIAMPCPREP RPE IEVKVE
Sbjct: 61  HRHLHLQSPPSKSNPTP-DLEKNQRESLSVLMPGDSIPKFIAMPCPREPLRPETIEVKVE 120

Query: 121 KPPKPPRIAVPFY 132
           KP KP RIAVPFY
Sbjct: 121 KPVKPLRIAVPFY 132

[Close]

BLAST of Lcy04g016070 vs. NCBI nr
Match: XP_038881262.1 (uncharacterized protein At5g65660-like [Benincasa hispida])

HSP 1 Score: 240.4 bits (612), Expect = 9.0e-60
Identity = 123/132 (93.18%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPL-D 60
           MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPL D
Sbjct: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD 60

Query: 61  HDLHLRSPPSKSSPTSLDLEKNPRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEK 120
            DLHLRS PSKS+PTS DLEKN RESLSVLMPGDS+PKFIAMPCPREPPR EMIEVKVEK
Sbjct: 61  DDLHLRSSPSKSNPTSQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPPRAEMIEVKVEK 120

Query: 121 PPKPPRIAVPFY 132
           PPKP RIAVPFY
Sbjct: 121 PPKPLRIAVPFY 132

[Close]

BLAST of Lcy04g016070 vs. NCBI nr
Match: XP_023518276.1 (uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.0 bits (598), Expect = 3.8e-58
Identity = 116/132 (87.88%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLDH 60
           ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q L H
Sbjct: 60  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 119

Query: 61  DLH-LRSPPSKSSPTSLDLEKNPRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEK 120
           D H L S PSKS+PT+LDLEKN RESLSV+MPGDS+PKFIAMPCPREPPRPEMI+VKVEK
Sbjct: 120 DHHLLPSSPSKSNPTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVKVEK 179

Query: 121 PPKPPRIAVPFY 132
           PPKPPRIA+PFY
Sbjct: 180 PPKPPRIAIPFY 191

[Close]

BLAST of Lcy04g016070 vs. NCBI nr
Match: XP_022962719.1 (uncharacterized protein At5g65660-like [Cucurbita moschata] >KAG6594923.1 hypothetical protein SDJN03_11476, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026886.1 hypothetical protein SDJN02_10893, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231.1 bits (588), Expect = 5.5e-57
Identity = 115/132 (87.12%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLDH 60
           ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q L H
Sbjct: 1   METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 60

Query: 61  DLH-LRSPPSKSSPTSLDLEKNPRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEK 120
           D H L S PSKS+ T+LDLEKN RESLSV+MPGDS+PKFIAMPCPREPPRPEMI VKVEK
Sbjct: 61  DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIHVKVEK 120

Query: 121 PPKPPRIAVPFY 132
           PPKPPRIA+PFY
Sbjct: 121 PPKPPRIAIPFY 132

[Close]

BLAST of Lcy04g016070 vs. NCBI nr
Match: XP_022133072.1 (uncharacterized protein At5g65660 [Momordica charantia])

HSP 1 Score: 229.9 bits (585), Expect = 1.2e-56
Identity = 117/131 (89.31%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLDH 60
           MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ    
Sbjct: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ--HP 60

Query: 61  DLHLRSPPSKSSPTSLDLEKNPRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEKP 120
            LHL S PSKS+P SLDLE N R+SLSVLMPGDS+PKFIAMPCPREPPRPEMI+VKVEKP
Sbjct: 61  HLHLPSSPSKSNPNSLDLETNQRDSLSVLMPGDSIPKFIAMPCPREPPRPEMIQVKVEKP 120

Query: 121 PKPPRIAVPFY 132
           PKPPRIAVPFY
Sbjct: 121 PKPPRIAVPFY 129

[Close]

BLAST of Lcy04g016070 vs. NCBI nr
Match: XP_023003846.1 (uncharacterized protein At5g65660-like [Cucurbita maxima])

HSP 1 Score: 228.8 bits (582), Expect = 2.7e-56
Identity = 114/132 (86.36%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLDH 60
           ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q L H
Sbjct: 60  METPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSIRRSAAQALHH 119

Query: 61  DLH-LRSPPSKSSPTSLDLEKNPRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEK 120
           D H L S PSKS+ T+LDLEKN RESLSV+MPGDS+PKFIAMPCPREPPRPEMI+V VEK
Sbjct: 120 DHHLLPSSPSKSNSTALDLEKNQRESLSVVMPGDSIPKFIAMPCPREPPRPEMIQVIVEK 179

Query: 121 PPKPPRIAVPFY 132
           PPKPPRIA+PFY
Sbjct: 180 PPKPPRIAIPFY 191

[Close]

BLAST of Lcy04g016070 vs. TAIR 10
Match: AT5G65660.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 148.7 bits (374), Expect = 3.3e-36
Identity = 79/132 (59.85%), Postives = 92/132 (69.70%), Query Frame = 0


Query: 5   DFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLDHDLHL 64
           DFSPPH DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLRRS +        +
Sbjct: 6   DFSPPHMDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKHRSLRRSLANGRP-SADI 65

Query: 65  RSPPSKSSPTSLDLEKNPRESLSVLMPGDSVPKFIAMPCPREPPRPEMIEVKVEKPP--- 124
            S P K  P   +++K    S+ VLMPGD+ PKFIA+PCP  PPRPE + V V+ PP   
Sbjct: 66  ESNPYKPKPPFPEMKKPQNLSVPVLMPGDNTPKFIALPCPCAPPRPEKLTVDVQTPPQSP 125

Query: 125 --KPPRIAVPFY 132
             KP R  VP Y
Sbjct: 126 PVKPARFPVPLY 136

The following BLAST results are available for this feature:

BLAST of Lcy04g016070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSK9	4.7e-35	59.85	Uncharacterized protein At5g65660 OS=Arabidopsis thaliana OX=3702 GN=At5g65660 P...	[more]

BLAST of Lcy04g016070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HHX0	2.7e-57	87.12	uncharacterized protein At5g65660-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1BVL2	5.9e-57	89.31	uncharacterized protein At5g65660 OS=Momordica charantia OX=3673 GN=LOC111005755...	[more]
A0A6J1KQE2	1.3e-56	86.36	uncharacterized protein At5g65660-like OS=Cucurbita maxima OX=3661 GN=LOC1114973...	[more]
A0A1S3B1W3	9.4e-55	87.22	uncharacterized protein At5g65660 OS=Cucumis melo OX=3656 GN=LOC103484911 PE=4 S...	[more]
A0A0A0KGL6	8.0e-54	87.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G497240 PE=4 SV=1	[more]

BLAST of Lcy04g016070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038881262.1	9.0e-60	93.18	uncharacterized protein At5g65660-like [Benincasa hispida]	[more]
XP_023518276.1	3.8e-58	87.88	uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962719.1	5.5e-57	87.12	uncharacterized protein At5g65660-like [Cucurbita moschata] >KAG6594923.1 hypoth...	[more]
XP_022133072.1	1.2e-56	89.31	uncharacterized protein At5g65660 [Momordica charantia]	[more]
XP_023003846.1	2.7e-56	86.36	uncharacterized protein At5g65660-like [Cucurbita maxima]	[more]

BLAST of Lcy04g016070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65660.1	3.3e-36	59.85	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..90
None	No IPR available	PANTHER	PTHR34291:SF11	SUBFAMILY NOT NAMED	coord: 1..131
IPR037699	Uncharacterized protein At5g65660-like	PANTHER	PTHR34291	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN	coord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g016070.1	Lcy04g016070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane