Lcy04g016020 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g016020
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	tRNA-dihydrouridine synthase
Location	Chr04: 48314809 .. 48322417 (+)
RNA-Seq Expression	Lcy04g016020
Synteny	Lcy04g016020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTGTTCTGCTTTTCGGTTTTCCAGCCTACAGTTCGCTAGAAGAGAAGGCGAAGAAATAGTTGCTCGATCTTCTGGTCTGACTGCTTCCGATTAACATGGATTACGAGAACAAACTCGTCCTTGCTCCTATGGTTCGCGTTGTAAGTTACACCGAATTATAGTATTTATTGCTTGACTTGCTCTCGTTACTTGATCAAGTTCATCACTTAATCTTAGTTATTTATTTCAAATTCCCGCTCGGTTGTCTCCGGTTAGATGCCAAGCAATGTTATGGAAGATTTTGGCTTAGTATTTGTTGTTTGTGTTGCTCTTCTTGCTTGATTCACTATATCTCGAAATCGTAGTTATATCTTGCAAAACACCCGCCAAATTTCTCCGTTTGGATGCTGAGCAATATTATGGAAGAGTCTGAATATTGAGGTTGCGTGTTTCGAAATACGACTTAAGTTTTCTTCATGGAGTCTTCCGTGATTGGTCCTTCTCGTTTTCAGGGAACTTTACCGTTTAGATTATTAGCTGCACAATACGGTGCAGACATCACCTATGGAGAGGAAATTATCGACCATAAGATGATCAAATGCGAGCGTAGAATAAATGGTACTCTTCTCCTCTCTATTGTATTTTTTTTTTTTTTTAAGTTATTGGTTTTCAATTGTACTCTTTCACTACATGCAAAAGTTATGAAGTAACAGTGCTACTATGTTCGTATGAAGTCTATTTCACCCTGAAAAATGATATGTTGACTTCATTTGTAAATTCGAACTTGAGAGAAATTCAGACCTTTTCCCCATTCCCTATTGTATGTTTATATTGGCAGTGGAGTTACTGTGTTCATTTACTGATAGTTATGGATGTGTTTGTTCGACATTATCATTGATCCATCTTGTATCCAAAGCCAAAACAATATGTTGGAACTTTTACTTTTCTTCTATAAATATGACTTCAATTAGAAGGAAAGATGTTGTTGTGCTTGGCAAGTGGCTTAGAAGACGAAGGTCGCAATAAGCATATGTTATTCCCTTTTCTTCACCAACTGTAAAACTTCTAATACCTCTCTATGTCATCTAGAGCATGTTGGTTCAACCGATTTCGTAGAGAAGGGGACGGACAATGTTGTTTTCAGGACCTGCAGCCTAGAAAGAAATCAAGTTGTTTTTCAAATGGGTACTTCTAATGCTGCGAGGGCTCTAACTGCTGCTCAACTAGTGTAATTACGTTACTTCCATTTTTTCCTTCTTTATACAGTTGAGGTCCTACAAGTTTGGTGGCGGTTATCTTCACTTTGTTATTTTTTGTTGACACCGTGAGTGTTAATTCCAGCCTGTGCGCACCTCACTTTGTACCATTTAATTTTTTTCCTTGCAACTAAGTGTCTTTATTAATAGGCTCTGTTATGGATCAAACTAAATTTTAGTAGCATTTTTAAAAAGTTATTTATCAATTTAATTATTCAATTAATGAGATGATCATGATTTATCTTTATGAATAGGCTCAGTTATGGATTGAATGTGACGATCGTGGTTTGATTACCATATGAGATTCCACTGGCTTAGTTGATTATTTCCTGCTCTCTTTCGTTGTGTGTCATGATTAGGTACTAAGTCGGAACAAGTGAGAATCCTTCTGTCCAATTTCTTACAAAACGAAATTTACAATTGATTTGGCACAGATTGCTACTCAAGATTGGATATGGGTCAATGGTCTATTTTGTGTGAATAAACAGTATCATAGGTTCTTGTTTCTAGATAGAAACTTTGTTTTTTCTTTCAACGTCTTTCCCTTGGTTATAGGCCTTTAGTTAGGCTTTAGCTAAACTTGTTCAGTTCATCTGCCAAATCAACAACAATATTGAGTCAGTGGTTGCTAGTATGATAGATCGAACCTGTGGTCCAAAATTTTGGCAAATTAAGGGAGAGTTCCTATTCAACTTGGCTGTGAGACTGGGTTGTTTTCTTGATACCCTTAAATGTTTTCTTAGTAATTGAAAATCGATTACTATCAGCAGTTTATATTGCTAGGTTTTGTGCTGCAAACTATTTATACTTAAGCATTCTCTGTTCCATTGCTTGCTTGGTTTACTCGTTTTAAGTCATGCATCATCTATGTATTGTTTTGCTATGGAAAACTATCATTTTCCATAGTTATTTCAAGCTGATTTAATTACTATTTTTTGTGCTACGAGAGAATTGGGTCTTTAGTTGGAGAAGAATGCTTCTTTATCTAATGATGATGGAAATTTTTCTCTTTTTAGGTGTCGAGACGTTGCTGCAATTGATATCAATATGGGTTGCCCTAAGTCATTTTCCATCAGTGGGGGCATGGGTGCTGCCCTATTGAGTAAACCGGACCTTATTCATGATGTATGCAACTCTTATCCTTACGAATTGATATAATTTTCTAAATTATTCTTCCTCTTCTGTATTTCTGGCATATTACTTACATATTCACCTTTTATTTGTTTGTTTTTTTAATTTAGATTTTGACAACATTAAGGAGGAACTTGGACATTCCAATTACCTGTAAGATTCGACTTTTAAATTCATCTCAGGATACAGTGGAGTTAGCTAGGCGAATAGAGACTACTGGCGTTTCAGCTCTTGCTGTTCATGGAAGGTGATCTTCAAGACACTTATCATTTCTGTCAGAATCAGAATTTAGTTGCAGAGTGATTACTCTTATCAACTAGTGGATTGCTTCTTAAAGCAATCTATGCTGTATGGAATTGATTGAGAATGATTATTCTCATGCAAATCAATCCTTTTTCCTCTCTCTTGGTAAAATTAGATTAGTTTGGTCATCTATGAACTAGTGCATTGTTCTCAGAGTTAACATGGTCACTTAAGTTTGAATCCATACTGACAGAAGTTTTTTTAACTAATCAAGGAGAAACTTATTGAAGCTTTCTTAAACATGCTATCAGGCCCTCAGGTAGTTGAGATGATAAATATGTATCAACCTTAAAGGCTTGAATTCCGTCGTAGAGAACAATGAAAGAAAAAGGCTCAAACTGTAGAAGCAGATATGTGGACGTTCATTAGCTACAAACTATTTTGATGTAATTTTGTGCTCTAAGAATGCTAGTAATTTAGACGAGTCTCTTGCTTGCTAAGGCTCATAATTTTTTTTCTAAAGGGGATAGTAGGTTAGATAGATTGCTAGGAAGCCGAATGTATGCTACCAAGCATGCTCAGAGGGCAGACTTCAAAACTATGGCAAATATTAGGCTTTGCAGTACTGGGAGAGGCCACTTGTTCAATAAGGCGCTGGTAAAGGAGGTAGTTGAAATCATTTTATGTTGATACTGAAGTGTATTACATCGGTTAAAAATGAAAAACAAAAGAAAAAGAATATTGCGTTGTATTAAATCAGCTGAAAACAAAAGAAAGCTGAAAGAGTAAACTACATTTGATCAGACCATTTAGTTCCAAGTGATACTTCTGTAAGTTTTGTATGAGTACTTTGTTTTCATTCTATTTTAATTGGTTTTTGTAGTCATGCTCGATAACTTGCAGAAGAGTTGCTGATAGACCAAGAGATCCAGCTAAGTGGAGTGAGATTGCAGATGTTGTGGCAGCATTGTCTATCCCGGTTGTTGCGAATGGTGATGTATTTGAGTATGCAGATTTTCAACGTATCAAAGTTGATACAGGTATGTACAGAAGGCACTGTTTTTGGATTTTCTTCTGATGATACCTGATGTTCTGTTTTAGTGGATGGGTTGATTATTAATTAAAATCATTTGAATTTGATGCCAACTTGAGCGTAGCTCACTGGTAATGACATTATATCCTTGATAAAAAAGTCTGAGGTTTGAATCCCCTCCCCACATGTTATTAAACTCAATATTATTTGAATTTGATTGTTCCAAATTTGTTAAGAATCTGCTTTTGTTTAGCTCTACCTCTTTGATTTCTTTTTCTGGTTTGCTCTTACTTAAAAAGAATTAAAAACTGACAAAAAAAAAAAAGAATTAAAAACTGATATATATATTGGGAAAGTAGTACATATATATTTGATACAATGTCCAAGAGTAAGATAAAAGGTAGAGATTCGAAATGTCTCAAATCAGTTTTGAACTAGAGGTAGAGGTCCAAAATGTCTCATAAGGTTCCCAACTACAGTGATGTACGGTCAGAAAATAGTCTTGTGAGATTAATCTAGGCATGTAACTATTAAACATTTCTGACCATCCACTGTTATTAAAAGAAAAAAGGAGCCGGTTGTCCAATAATTGCTGAATGCTGAATATGGAAGAAACAAGTTGGAAAGCTTTCAGTTCTTAACCTACGAGGCTACAATAGTTTCAATGCCTTTGAATTAGCAAATAAATGAATTACAGAGTATAAAAACTATATGGACCGCTTGTATTGTGGGGATTTTTTTTCCTTCGTGTTAACTCAACATATTAACCAAGTGGAAGAGTAAATACACTGTCTTTACGGTACACCATTGCGTTGCTTTTGTGGAAGAGAGAGTGTGGTTACATTTAATTGACATGAATTAGAACTACAACAATGCTGTAATCCATTAGTATAGTGATGAAGTTTGTTTGGCAGACAGATGCTATTTCAAGCAGTTTAAGTTTTTACTTGTCCGTCAATGATCTCTTGCTATAAATACTAAAAGAATCTGGTATTGCTCAAGGTGCTTCCTCAGTGATGGTTGCTCGAGGAGCTCTTTGGAATGCTTCAATCTTCTCCCCGGAAGGAAAATTACCATGGGAAGATGTGAAAAGAGAATATGTTAGGAAGGTGAGGTGCATATCATGTACACAGTACATTTAGTATATTGATCAACTAGAGTTAATGCTTTATATCTGTATAGTGTCCCTGCAAGATTATATACATATAGATATAGACACACACTGACGAACTGAATTTGAAGTGACTGATTTCTTGTGTTGAACTCAGAGCATCTTGTGGGACAATGATATCAAGAGTACAAAACACACGCTAAAAGAAATGATAATGCATTATTCTTGCCTCGAACTTCCAGAAGGAAAGGCCGTGATAAAATCTGATACCTTAGCAGATCTAGCGTAAGTAAATGCTGTTAATTTATAATTGATTTTTTGCCATCTTGTGGGATGCAAGATATTCTTCATGATCATTCAGATTTTATTATTATTATTATTATTATTTTTTTTTTACTTCTGTATTTTTGTGCCATATTTTACCTGTTGCATATTTTGAACCATGCGCGTTGTTAATATATATGGTATTGAAGGGAGTATTGATTTCATGAATTCAAAGTTGCTGAAATGCATCTAACTCTTGGATTTCCAAATGAACAAAGAAAAAAGAAGATGTGTGAAGTATTTCTTCCATTGAGAAGGAAACAAAACTTTTCATTGAGGTAGAAGTGAAAGTGAAAAAGGATTCCTCGTATTAACCCGCCAACCACTAAAAAGGAAAAAGATATATATATGTGTGTGTGTATCTATGTATGTATCTGTGTACATATATGTATATATGTATGTATGTATTAAATATTAGCCATTCATTGAGAAAAAATGAAAGAATACAAGTGCATCCAAAAAACCAAGCCCGCAATAGAATAATTACAAAATAATTGTGTCACCGATGCTCAAAGAGAAACATGGAATCTAGCAATAAACCAAACCTCACAAGAGCTTCTCTCCCGCCCTCTAAAGGTCCTATTATTTCTCTCATTCCACCAACCTCACAGAACAGTGCAGATCTCTGCCTGCTATAGGAACTTCCCTTCCTGCCTAAATAGCAGATGGGAGAATAACTCTTGAAGCATCTCTTGGAGACCTCCTCAAAAAGTAATTCCAAGCCGAAAGAGCAAAGTCACAGCTCCAAAGCAAGTGTCAAGGTCTTTCTCCACCATCCGACAAAGAATGCAATAGAACGGACCGATCAGAGAAGGCATCTTTTTTGAGAGTCGATCTAAAGTATTACAGGATGATCTGCTGAACGAAAATCCCCATTCTGATGACAAGCCTTTTGATACAACCTGAAAAAATCACAAAAGATCTTCCCAATTTGTGTTAATCACAGAGATGGAGTAAAAAACACCTCTCTCTCTAAAGAAATCCAAAGGAAACAATTGAGTTTTGCACTTTCTAAAACCTCCACTCCAATCTTTAGGGACCCCCTGAACACCCATCCACCCAAAGAAGGATTTATAGTATTAATCCCCAGCTTCTTGGCTCTTCCTATAAAAGAAACACCAAATACCAGCTGCACAATATTAACCTTCAATAATGATGAAAAATCCAAGAAAGGCCCAAAGTTTGCATTTGCAACAAGAATCTTAAAAGTTTCCGCTAAAAGAACACCAAAATATTAGATGATATCATGATCCATATCTTCAGTTCCCTTAGCACACAGAGACCATTGGAGGATACAGAACCGCAGAAAAGGCCAACTTTGTTGAAATCTTCCCCACCATATTGAGTCAAACTCCCTATAAAAACATTTTAACTTGTTTTGGACATGTACCCCTTCTGAAGTCAAATCCTCCCCTCCTTCCTTTCCACGATCTCTATTTTTCAGCAAAGATCTGAAAAGGGATGTCCTAGTCAATGAAGGTTTGGGTTTTCGGGCTGGATGTAATGTTAGGCCCCCAGTGGTTATTACGTACTCTAGGAGGGGTAGAAACGTAAATTCTCCTTCCCCTTAAGTTAATCAGTGTTCTGTTGTAAGTTATATTTAAGTTGCTGTTAGTTTCCATTATGTTTTATGCTTTATGTGATTTTGGTTTCTCTGTCCTGTGTGATAGAGTAAGGGAGAGCGCCACCCTCTCGAAAGGTGGTAAGTTCGTGTGCTTTTGTACTCTCCTTTTGGAACACTGAAGGTTGAATGAAATCGTCCTGAGGGACTTGTGTATTGAGACTTGTTGTTTGTTACTGTTAAGATTCATTAGGGATCGTGTTTCAGAGTGAGGTTAACACAGGAACCTAACATGTAACTCAAGAGTCAATGGGTATGTTCCAGACTCCCATGGATTAGTGGGTTGGGATGATCCTGATATCACATGTATATCAAAAAACAATGAAAATATTATTTGTTACGTGGATGTTTCTTTGGACTACCTTCTATTTGTTATCCTATGCAAAGTTTTCCATTCTGTGTCCGAAATTGCATTTGAACTGATATATCACGCTAGTTTGAAGCTAATAATGCCTATCTTTTAATTTCTGTATTATAGGAAACTTTATGGTGAGGAAAAGTACTATGAATTTGTTCAAGAGAAGCGGTTGTTCAATGGAAGTAGATGACGAGGTTTCCTAGTTCAGATCAAAGATACTTGCTGCTCATTACTTCAACATGTGAACGGAGAATTGAAACTTGCAGCTTTAAAGTCGCTTTACTCTCTCAGTAAAACCCATTTGATTGATTATACACGCAGATACTGTATCGTTCTTCAGAATAGTATGGACAAGTTGGATGCTCTACGGCAGCATGATATTAATATATTTTTACGCCTTTCATTCTTATCAGGTTAAAAACACTGGGTTATTTACCTGCCACAGTTAATCTCAATGTGATTATATTATATCCAATAGACACTTTGAAAACAAACTGCCACAGTTATTTCCGCGTTTTGTTTTTTTAAGAGATCAGCTACTTAGATTTGAC

mRNA sequence

CTCTGTTCTGCTTTTCGGTTTTCCAGCCTACAGTTCGCTAGAAGAGAAGGCGAAGAAATAGTTGCTCGATCTTCTGGTCTGACTGCTTCCGATTAACATGGATTACGAGAACAAACTCGTCCTTGCTCCTATGGTTCGCGTTGGAACTTTACCGTTTAGATTATTAGCTGCACAATACGGTGCAGACATCACCTATGGAGAGGAAATTATCGACCATAAGATGATCAAATGCGAGCGTAGAATAAATGAGCATGTTGGTTCAACCGATTTCGTAGAGAAGGGGACGGACAATGTTGTTTTCAGGACCTGCAGCCTAGAAAGAAATCAAGTTGTTTTTCAAATGGGTACTTCTAATGCTGCGAGGGCTCTAACTGCTGCTCAACTAGTGTGTCGAGACGTTGCTGCAATTGATATCAATATGGGTTGCCCTAAGTCATTTTCCATCAGTGGGGGCATGGGTGCTGCCCTATTGAGTAAACCGGACCTTATTCATGATATTTTGACAACATTAAGGAGGAACTTGGACATTCCAATTACCTGTAAGATTCGACTTTTAAATTCATCTCAGGATACAGTGGAGTTAGCTAGGCGAATAGAGACTACTGGCGTTTCAGCTCTTGCTGTTCATGGAAGAAGAGTTGCTGATAGACCAAGAGATCCAGCTAAGTGGAGTGAGATTGCAGATGTTGTGGCAGCATTGTCTATCCCGGTTGTTGCGAATGGTGATGTATTTGAGTATGCAGATTTTCAACGTATCAAAGTTGATACAGGTGCTTCCTCAGTGATGGTTGCTCGAGGAGCTCTTTGGAATGCTTCAATCTTCTCCCCGGAAGGAAAATTACCATGGGAAGATGTGAAAAGAGAATATGTTAGGAAGAGCATCTTGTGGGACAATGATATCAAGAGTACAAAACACACGCTAAAAGAAATGATAATGCATTATTCTTGCCTCGAACTTCCAGAAGGAAAGGCCGTGATAAAATCTGATACCTTAGCAGATCTAGCGAAACTTTATGGTGAGGAAAAGTACTATGAATTTGTTCAAGAGAAGCGGTTGTTCAATGGAAGTAGATGACGAGGTTTCCTAGTTCAGATCAAAGATACTTGCTGCTCATTACTTCAACATGTGAACGGAGAATTGAAACTTGCAGCTTTAAAGTCGCTTTACTCTCTCAGTAAAACCCATTTGATTGATTATACACGCAGATACTGTATCGTTCTTCAGAATAGTATGGACAAGTTGGATGCTCTACGGCAGCATGATATTAATATATTTTTACGCCTTTCATTCTTATCAGGTTAAAAACACTGGGTTATTTACCTGCCACAGTTAATCTCAATGTGATTATATTATATCCAATAGACACTTTGAAAACAAACTGCCACAGTTATTTCCGCGTTTTGTTTTTTTAAGAGATCAGCTACTTAGATTTGAC

Coding sequence (CDS)

ATGGATTACGAGAACAAACTCGTCCTTGCTCCTATGGTTCGCGTTGGAACTTTACCGTTTAGATTATTAGCTGCACAATACGGTGCAGACATCACCTATGGAGAGGAAATTATCGACCATAAGATGATCAAATGCGAGCGTAGAATAAATGAGCATGTTGGTTCAACCGATTTCGTAGAGAAGGGGACGGACAATGTTGTTTTCAGGACCTGCAGCCTAGAAAGAAATCAAGTTGTTTTTCAAATGGGTACTTCTAATGCTGCGAGGGCTCTAACTGCTGCTCAACTAGTGTGTCGAGACGTTGCTGCAATTGATATCAATATGGGTTGCCCTAAGTCATTTTCCATCAGTGGGGGCATGGGTGCTGCCCTATTGAGTAAACCGGACCTTATTCATGATATTTTGACAACATTAAGGAGGAACTTGGACATTCCAATTACCTGTAAGATTCGACTTTTAAATTCATCTCAGGATACAGTGGAGTTAGCTAGGCGAATAGAGACTACTGGCGTTTCAGCTCTTGCTGTTCATGGAAGAAGAGTTGCTGATAGACCAAGAGATCCAGCTAAGTGGAGTGAGATTGCAGATGTTGTGGCAGCATTGTCTATCCCGGTTGTTGCGAATGGTGATGTATTTGAGTATGCAGATTTTCAACGTATCAAAGTTGATACAGGTGCTTCCTCAGTGATGGTTGCTCGAGGAGCTCTTTGGAATGCTTCAATCTTCTCCCCGGAAGGAAAATTACCATGGGAAGATGTGAAAAGAGAATATGTTAGGAAGAGCATCTTGTGGGACAATGATATCAAGAGTACAAAACACACGCTAAAAGAAATGATAATGCATTATTCTTGCCTCGAACTTCCAGAAGGAAAGGCCGTGATAAAATCTGATACCTTAGCAGATCTAGCGAAACTTTATGGTGAGGAAAAGTACTATGAATTTGTTCAAGAGAAGCGGTTGTTCAATGGAAGTAGATGA

Protein sequence

MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVEKGTDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSISGGMGAALLSKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRRVADRPRDPAKWSEIADVVAALSIPVVANGDVFEYADFQRIKVDTGASSVMVARGALWNASIFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLADLAKLYGEEKYYEFVQEKRLFNGSR

Homology

[Close]

BLAST of Lcy04g016020 vs. ExPASy Swiss-Prot
Match: Q9NX74 (tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Homo sapiens OX=9606 GN=DUS2 PE=1 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 8.0e-84
Identity = 162/315 (51.43%), Postives = 217/315 (68.89%), Query Frame = 0


Query: 3   YENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVEKG 62
           Y NKL+LAPMVRVGTLP RLLA  YGADI Y EE+ID KMI+C+R +NE + + DFV   
Sbjct: 10  YHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDFVAP- 69

Query: 63  TDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSISGGMGA 122
            D VVFRTC  E+N+VVFQMGTS+A RAL  A+LV  DVA ID+NMGCPK +S  GGMGA
Sbjct: 70  DDRVVFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKGGMGA 129

Query: 123 ALLSKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRRVA 182
           ALLS PD I  IL+TL +    P+TCKIR+L S +DT+ L +RIE TG++A+AVHGR+  
Sbjct: 130 ALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAVHGRKRE 189

Query: 183 DRPRDPAKWSEIADVVAALSIPVVANG----DVFEYADFQRIKVDTGASSVMVARGALWN 242
           +RP+ P     I  +   LSIPV+ANG     + +Y+D +  +  T ASSVMVAR A+WN
Sbjct: 190 ERPQHPVSCEVIKAIADTLSIPVIANGGSHDHIQQYSDIEDFRQATAASSVMVARAAMWN 249

Query: 243 ASIFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDT 302
            SIF  EG  P E+V ++Y+R ++ +DN   +TK+ L +M+     LE P+G+ +  + +
Sbjct: 250 PSIFLKEGLRPLEEVMQKYIRYAVQYDNHYTNTKYCLCQMLREQ--LESPQGRLLHAAQS 309

Query: 303 LADLAKLYGEEKYYE 314
             ++ + +G   +YE
Sbjct: 310 SREICEAFGLGAFYE 321

[Close]

BLAST of Lcy04g016020 vs. ExPASy Swiss-Prot
Match: Q9D7B1 (tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Mus musculus OX=10090 GN=Dus2 PE=1 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 3.3e-82
Identity = 159/315 (50.48%), Postives = 215/315 (68.25%), Query Frame = 0


Query: 3   YENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVEKG 62
           Y NKL+LAPMVRVGTLP RLLA  YGADI Y EE+ID KM++C+R +NE + + DFV   
Sbjct: 10  YHNKLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMLQCKRVVNEVLSTVDFVAP- 69

Query: 63  TDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSISGGMGA 122
            D VVFRTC  E+++VVFQMGTS+A RAL  A+LV  DVA ID+NMGCPK +S  GGMGA
Sbjct: 70  DDRVVFRTCEREQSRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKEYSTKGGMGA 129

Query: 123 ALLSKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRRVA 182
           ALLS PD I  IL+TL +    P+TCKIR+L S +DT+ L +RIE TG+SA+AVHGR   
Sbjct: 130 ALLSDPDKIEKILSTLVKGTHRPVTCKIRILPSLEDTLNLVKRIERTGISAIAVHGRNRD 189

Query: 183 DRPRDPAKWSEIADVVAALSIPVVANG----DVFEYADFQRIKVDTGASSVMVARGALWN 242
           +RP+ P     I  +   LSIPV+ANG     + ++ D +  +  T ASSVMVAR A+WN
Sbjct: 190 ERPQHPVSCEVIRAIAETLSIPVIANGGSHDHIQQHVDIEDFRQATAASSVMVARAAMWN 249

Query: 243 ASIFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDT 302
            SIF  +G  P E+V ++Y+R ++ +DN   +TK+ L +M+     LE P+G+ +  + +
Sbjct: 250 PSIFLKDGLRPLEEVMQKYIRYAVQYDNHYTNTKYCLCQMLREQ--LESPQGRLLHAAQS 309

Query: 303 LADLAKLYGEEKYYE 314
             ++ + +G   +YE
Sbjct: 310 SQEICEAFGLGAFYE 321

[Close]

BLAST of Lcy04g016020 vs. ExPASy Swiss-Prot
Match: O74731 (tRNA-dihydrouridine(20) synthase [NAD(P)+] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dus2 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.3e-53
Identity = 114/289 (39.45%), Postives = 173/289 (59.86%), Query Frame = 0


Query: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIK---CERRINEHVGSTD 60
           ++Y NK+ LAPMVR+G LP RLLA +YGA++ +G EI+D  ++     ER +N+ +   D
Sbjct: 4   LNYSNKVCLAPMVRIGELPMRLLALRYGANLVWGPEIVDKALLSGTPVERVVNDRINCID 63

Query: 61  FVEKGTDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSIS 120
           FV+  ++ V+FR   LE N+++FQ+G+++   A+ AA+LV  DVA ID+N GCPK FS+ 
Sbjct: 64  FVKPPSNKVLFRVHPLEANRLIFQLGSASPELAVEAAKLVANDVAGIDLNCGCPKHFSVH 123

Query: 121 GGMGAALLSKPDLIHDILTTLRRNLDIP----ITCKIRLLNSSQDTVELARRIETTGVSA 180
            GMGA LL   D +  IL  L   +  P    I+CKIRLL + +DT++L  RI  TGV A
Sbjct: 124 AGMGAGLLKNQDRLVSILDALVNEIGKPYKISISCKIRLLETKEDTLKLVERICDTGVRA 183

Query: 181 LAVHGRRVADRPRDPAKWSEIADVVAAL---SIPVVANGDVFEYADFQRIKVDTGASSVM 240
           + VH R    R  +PA  S ++++V       + ++ NGDV  Y D   +    G   V+
Sbjct: 184 ITVHCRTTPMRNTEPADRSYLSEIVGVCRNKDVSILVNGDVLSYNDGLDVIEKYGVDGVL 243

Query: 241 VARGALWNASIFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMI 280
           +AR A  N S F  EG L    V  E+++ ++  DN+  +TK+ L +++
Sbjct: 244 IARAAERNVSCFRIEGPLSSFKVAEEFLKMALEVDNNFGNTKYCLNQIM 292

[Close]

BLAST of Lcy04g016020 vs. ExPASy Swiss-Prot
Match: P53720 (tRNA-dihydrouridine(20) synthase [NAD(P)+] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SMM1 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-42
Identity = 109/298 (36.58%), Postives = 174/298 (58.39%), Query Frame = 0


Query: 3   YENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDF---- 62
           Y  KLVLAPMVR G LP RL+A  +GAD+ +  EIID K+I+C R+ N  + + D+    
Sbjct: 4   YAGKLVLAPMVRAGELPTRLMALAHGADLVWSPEIIDKKLIQCVRKENTALQTVDYVVPS 63

Query: 63  -VEKGTDNVVFRTC-SLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSI 122
            V+   + +VFRT   LE ++++FQ+G+++ A A  AA  V  DV+ IDIN GCPK FSI
Sbjct: 64  KVQTRPETLVFRTYPKLESSKLIFQIGSASPALATQAALKVINDVSGIDINAGCPKHFSI 123

Query: 123 SGGMGAALLSKPDLIHDILTTLRRNL----DIPITCKIRLLNSSQDTVELARRIETTGVS 182
             GMG+ALL  PD +  IL  L +N+      PI+ KIRLL++ QDT++L +R+  TG++
Sbjct: 124 HSGMGSALLRTPDTLCLILKELVKNVGNPHSKPISVKIRLLDTKQDTLQLVKRLCATGIT 183

Query: 183 ALAVHGRRVADRPRDPA---KWSEIADVVAALSIPVVANGDVFEYADFQRIKVDTGASS- 242
            L VH R+   R R+       +EI ++  A ++ ++ NG + + + F  ++ +   ++ 
Sbjct: 184 NLTVHCRKTEMRNREQPITDYIAEIYEICQANNVSLIVNGAIRDRSHFHDLQANHWKNTN 243

Query: 243 --VMVARGALWNASIFSPEGK-----LPWEDVKREYVRKSILWDNDIKSTKHTLKEMI 280
              M+A  A  + ++F    K       W    RE+++ +  +DN I +TK+ L  ++
Sbjct: 244 IGGMIAECAERDPTVFDHTSKPSEDGPSWVVACREFIQWATKFDNHIGNTKYMLSRIV 301

[Close]

BLAST of Lcy04g016020 vs. ExPASy Swiss-Prot
Match: Q32M08 (tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like OS=Mus musculus OX=10090 GN=Dus4l PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.6e-31
Identity = 88/262 (33.59%), Postives = 133/262 (50.76%), Query Frame = 0


Query: 8   VLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVEKGTDNVV 67
           V APMVR   L FR L  +Y  D+ Y   II                + DFV     ++ 
Sbjct: 30  VCAPMVRYSKLAFRTLVRKYSCDLCYTPMII----------------AADFVR----SIK 89

Query: 68  FRTCSLERNQ----VVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSISGGMGAA 127
            R      NQ    ++ Q   ++A     AA LVC     IDIN GCP+ ++++ G GA 
Sbjct: 90  ARDSEFTTNQGDCPLIVQFAANDARLLSDAALLVCPYANGIDINCGCPQRWAMADGYGAC 149

Query: 128 LLSKPDLIHDILTTLRRNLDIP---ITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 187
           L++KP+L+HD++  +R  ++ P   ++ KIR+ +    T++L R+ E TGVS + VHGR 
Sbjct: 150 LINKPELVHDMVRQVRNRVESPRFSVSIKIRIHDDLARTIDLCRKAEATGVSWITVHGRT 209

Query: 188 VADRPRDPAKWSEIADVVAALSIPVVANGDVFEYADFQRIKVDTGASSVMVARGALWNAS 247
           V +R   P  +  I  +   +SIP+VANGD+    + + +   TG   VMVARG L N +
Sbjct: 210 VEER-HQPVHYDAIKMIKENVSIPIVANGDIRSLKEAENVWQMTGTDGVMVARGLLANPA 269

Query: 248 IFSPEGKLP------WEDVKRE 257
           +F+   + P      W D+  E
Sbjct: 270 MFAGYEETPLKCIWDWVDISLE 270

[Close]

BLAST of Lcy04g016020 vs. ExPASy TrEMBL
Match: A0A6J1KSI8 (tRNA-dihydrouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111497209 PE=3 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 7.3e-173
Identity = 305/325 (93.85%), Postives = 316/325 (97.23%), Query Frame = 0


Query: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVE 60
           MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVG+ DFVE
Sbjct: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGAVDFVE 60

Query: 61  KGTDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSISGGM 120
           KGTDNVVFRTCSLE+NQVVFQMGTSNA RAL+AAQLVC+DVAAIDINMGCPKSFSISGGM
Sbjct: 61  KGTDNVVFRTCSLEKNQVVFQMGTSNAVRALSAAQLVCQDVAAIDINMGCPKSFSISGGM 120

Query: 121 GAALLSKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180
           GAALL KPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR
Sbjct: 121 GAALLKKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180

Query: 181 VADRPRDPAKWSEIADVVAALSIPVVANGDVFEYADFQRIKVDTGASSVMVARGALWNAS 240
           VADRPRDPAKWSEIADVVAALS+PV+ANGD+FEY DF  IKV TGASSVMVARGALWNAS
Sbjct: 181 VADRPRDPAKWSEIADVVAALSVPVIANGDIFEYEDFHHIKVATGASSVMVARGALWNAS 240

Query: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300
           IFS +GKLPWE+VKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA
Sbjct: 241 IFSEDGKLPWEEVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300

Query: 301 DLAKLYGEEKYYEFVQEKRLFNGSR 326
           DLAKLYGEEKY +FVQEKRLF+GSR
Sbjct: 301 DLAKLYGEEKYNQFVQEKRLFDGSR 325

[Close]

BLAST of Lcy04g016020 vs. ExPASy TrEMBL
Match: A0A6J1BSD4 (tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005266 PE=4 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 1.6e-172
Identity = 302/325 (92.92%), Postives = 319/325 (98.15%), Query Frame = 0


Query: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVE 60
           M+YENKL+LAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKM+KCERR+NE VGSTDFVE
Sbjct: 1   MEYENKLILAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMVKCERRLNERVGSTDFVE 60

Query: 61  KGTDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSISGGM 120
           KGTDNVVFRTCSLER+QVVFQMGTSNA RALTAAQ+VC+DVAA+DINMGCPKSFSISGGM
Sbjct: 61  KGTDNVVFRTCSLERSQVVFQMGTSNAVRALTAAQIVCQDVAAVDINMGCPKSFSISGGM 120

Query: 121 GAALLSKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180
           GAALL+KPDLIHDILTTLRRNL+IPITCKIRLL+SSQDTVELARRIET GVSAL VHGRR
Sbjct: 121 GAALLNKPDLIHDILTTLRRNLNIPITCKIRLLSSSQDTVELARRIETIGVSALVVHGRR 180

Query: 181 VADRPRDPAKWSEIADVVAALSIPVVANGDVFEYADFQRIKVDTGASSVMVARGALWNAS 240
           VADRPRDPAKWSEIADVVAALSIPV+ANGD+FEYADFQR+KVDTGASSVMVARGALWNAS
Sbjct: 181 VADRPRDPAKWSEIADVVAALSIPVIANGDIFEYADFQRVKVDTGASSVMVARGALWNAS 240

Query: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300
           IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKS++LA
Sbjct: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSESLA 300

Query: 301 DLAKLYGEEKYYEFVQEKRLFNGSR 326
           DLAKLYGEEKY  FVQEKRLF+GSR
Sbjct: 301 DLAKLYGEEKYNLFVQEKRLFDGSR 325

[Close]

BLAST of Lcy04g016020 vs. ExPASy TrEMBL
Match: A0A6J1HHN5 (tRNA-dihydrouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111463056 PE=3 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 1.6e-172
Identity = 304/325 (93.54%), Postives = 316/325 (97.23%), Query Frame = 0


Query: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVE 60
           MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVG+ DFVE
Sbjct: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGAVDFVE 60

Query: 61  KGTDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSISGGM 120
           KGTDNVVFRTCSLE+N+VVFQMGTSNA RAL+AAQLVC+DVAAIDINMGCPKSFSISGGM
Sbjct: 61  KGTDNVVFRTCSLEKNEVVFQMGTSNAVRALSAAQLVCQDVAAIDINMGCPKSFSISGGM 120

Query: 121 GAALLSKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180
           GAALL KPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR
Sbjct: 121 GAALLKKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180

Query: 181 VADRPRDPAKWSEIADVVAALSIPVVANGDVFEYADFQRIKVDTGASSVMVARGALWNAS 240
           VADRPRDPAKWSEIADVVAALS+PV+ANGD+FEY DF  IKV TGASSVMVARGALWNAS
Sbjct: 181 VADRPRDPAKWSEIADVVAALSVPVIANGDIFEYEDFHHIKVATGASSVMVARGALWNAS 240

Query: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300
           IFS +GKLPWE+VKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA
Sbjct: 241 IFSADGKLPWEEVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300

Query: 301 DLAKLYGEEKYYEFVQEKRLFNGSR 326
           DLAKLYGEEKY +FVQEKRLF+GSR
Sbjct: 301 DLAKLYGEEKYNQFVQEKRLFDGSR 325

[Close]

BLAST of Lcy04g016020 vs. ExPASy TrEMBL
Match: A0A1S3B193 (tRNA-dihydrouridine synthase OS=Cucumis melo OX=3656 GN=LOC103484905 PE=3 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 6.8e-171
Identity = 301/325 (92.62%), Postives = 316/325 (97.23%), Query Frame = 0


Query: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVE 60
           MDYENKLVLAPMVRVGTLPFRLLA+QYGADITYGEEIIDHKMIKCERR+NEHVGSTDFVE
Sbjct: 1   MDYENKLVLAPMVRVGTLPFRLLASQYGADITYGEEIIDHKMIKCERRLNEHVGSTDFVE 60

Query: 61  KGTDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSISGGM 120
           KGT+NVVFRTCSLER  VVFQMGTSNAARAL+AAQLVCRDVAAIDINMGCPKSFSISGGM
Sbjct: 61  KGTNNVVFRTCSLERKHVVFQMGTSNAARALSAAQLVCRDVAAIDINMGCPKSFSISGGM 120

Query: 121 GAALLSKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180
           GAALL+KPDLIHDILTTLRRNLD+ ITCKIRLLNS QDTVELARRIETTGVSAL VHGRR
Sbjct: 121 GAALLNKPDLIHDILTTLRRNLDVLITCKIRLLNSPQDTVELARRIETTGVSALGVHGRR 180

Query: 181 VADRPRDPAKWSEIADVVAALSIPVVANGDVFEYADFQRIKVDTGASSVMVARGALWNAS 240
           VADRPRDPAKWSEIADVVAAL+IPV+ANGD+FEY DFQRIKV TGASS+MVARGALWNAS
Sbjct: 181 VADRPRDPAKWSEIADVVAALTIPVIANGDIFEYDDFQRIKVHTGASSLMVARGALWNAS 240

Query: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300
           IFSPEGKLPWEDVKREYVRKSILWDNDIKSTK+TLKEMIMH+SCLELPEGKAVIKS++LA
Sbjct: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKYTLKEMIMHHSCLELPEGKAVIKSESLA 300

Query: 301 DLAKLYGEEKYYEFVQEKRLFNGSR 326
           DLAKLYGEEKYY+FVQE R FNGSR
Sbjct: 301 DLAKLYGEEKYYQFVQENRSFNGSR 325

[Close]

BLAST of Lcy04g016020 vs. ExPASy TrEMBL
Match: A0A0A0KGL3 (tRNA-dihydrouridine synthase OS=Cucumis sativus OX=3659 GN=Csa_6G497190 PE=3 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 4.1e-168
Identity = 297/325 (91.38%), Postives = 314/325 (96.62%), Query Frame = 0


Query: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVE 60
           MDYENK VLAPMVRVGTLPFRLLA+QYGADITYGEEIIDHKMIKCERR+NEHVGSTDFVE
Sbjct: 1   MDYENKFVLAPMVRVGTLPFRLLASQYGADITYGEEIIDHKMIKCERRLNEHVGSTDFVE 60

Query: 61  KGTDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSISGGM 120
           KGT+NVVFRTCSLER  VVFQMGTSNAARAL+AAQLVC+DVAAIDINMGCPKSFSISGGM
Sbjct: 61  KGTNNVVFRTCSLERKHVVFQMGTSNAARALSAAQLVCQDVAAIDINMGCPKSFSISGGM 120

Query: 121 GAALLSKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180
           GAALL+KPDLIHDILTTLRRNL+I ITCKIRLLNS QDTVELARRIE+TGVSAL VHGRR
Sbjct: 121 GAALLNKPDLIHDILTTLRRNLNILITCKIRLLNSPQDTVELARRIESTGVSALGVHGRR 180

Query: 181 VADRPRDPAKWSEIADVVAALSIPVVANGDVFEYADFQRIKVDTGASSVMVARGALWNAS 240
           VADRPRDPAKWSEIADVVAAL+IPV+ANGD+FEY DFQRIKV TGASS+MVARGALWNAS
Sbjct: 181 VADRPRDPAKWSEIADVVAALTIPVIANGDIFEYDDFQRIKVHTGASSMMVARGALWNAS 240

Query: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300
           IFSPEGKLPWEDVKREYVRKSILWDNDIKSTK+TLKEMIMH+SCLELPEGKAVIKS++LA
Sbjct: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKYTLKEMIMHHSCLELPEGKAVIKSESLA 300

Query: 301 DLAKLYGEEKYYEFVQEKRLFNGSR 326
           DLAKLYGEEKYY+FVQE R FN SR
Sbjct: 301 DLAKLYGEEKYYQFVQENRSFNESR 325

[Close]

BLAST of Lcy04g016020 vs. NCBI nr
Match: XP_023003695.1 (tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 616.3 bits (1588), Expect = 1.5e-172
Identity = 305/325 (93.85%), Postives = 316/325 (97.23%), Query Frame = 0


Query: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVE 60
           MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVG+ DFVE
Sbjct: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGAVDFVE 60

Query: 61  KGTDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSISGGM 120
           KGTDNVVFRTCSLE+NQVVFQMGTSNA RAL+AAQLVC+DVAAIDINMGCPKSFSISGGM
Sbjct: 61  KGTDNVVFRTCSLEKNQVVFQMGTSNAVRALSAAQLVCQDVAAIDINMGCPKSFSISGGM 120

Query: 121 GAALLSKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180
           GAALL KPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR
Sbjct: 121 GAALLKKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180

Query: 181 VADRPRDPAKWSEIADVVAALSIPVVANGDVFEYADFQRIKVDTGASSVMVARGALWNAS 240
           VADRPRDPAKWSEIADVVAALS+PV+ANGD+FEY DF  IKV TGASSVMVARGALWNAS
Sbjct: 181 VADRPRDPAKWSEIADVVAALSVPVIANGDIFEYEDFHHIKVATGASSVMVARGALWNAS 240

Query: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300
           IFS +GKLPWE+VKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA
Sbjct: 241 IFSEDGKLPWEEVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300

Query: 301 DLAKLYGEEKYYEFVQEKRLFNGSR 326
           DLAKLYGEEKY +FVQEKRLF+GSR
Sbjct: 301 DLAKLYGEEKYNQFVQEKRLFDGSR 325

[Close]

BLAST of Lcy04g016020 vs. NCBI nr
Match: KAG6594928.1 (tRNA-dihydrouridine(20) synthase [NAD(P)+]-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 615.1 bits (1585), Expect = 3.4e-172
Identity = 304/325 (93.54%), Postives = 316/325 (97.23%), Query Frame = 0


Query: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVE 60
           MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVG+ DFVE
Sbjct: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGAVDFVE 60

Query: 61  KGTDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSISGGM 120
           KGTDNVVFRTCSLE+N+VVFQMGTSNA RAL+AAQLVC+DVAAIDINMGCPKSFSISGGM
Sbjct: 61  KGTDNVVFRTCSLEKNEVVFQMGTSNAVRALSAAQLVCQDVAAIDINMGCPKSFSISGGM 120

Query: 121 GAALLSKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180
           GAALL KPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR
Sbjct: 121 GAALLKKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180

Query: 181 VADRPRDPAKWSEIADVVAALSIPVVANGDVFEYADFQRIKVDTGASSVMVARGALWNAS 240
           VADRPRDPAKWSEIADVVAALS+PV+ANGD+FEY DF  IKV TGASSVMVARGALWNAS
Sbjct: 181 VADRPRDPAKWSEIADVVAALSVPVIANGDIFEYEDFHNIKVATGASSVMVARGALWNAS 240

Query: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300
           IFS +GKLPWE+VKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA
Sbjct: 241 IFSADGKLPWEEVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300

Query: 301 DLAKLYGEEKYYEFVQEKRLFNGSR 326
           DLAKLYGEEKY +FVQEKRLF+GSR
Sbjct: 301 DLAKLYGEEKYNQFVQEKRLFDGSR 325

[Close]

BLAST of Lcy04g016020 vs. NCBI nr
Match: XP_022132400.1 (tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 [Momordica charantia])

HSP 1 Score: 615.1 bits (1585), Expect = 3.4e-172
Identity = 302/325 (92.92%), Postives = 319/325 (98.15%), Query Frame = 0


Query: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVE 60
           M+YENKL+LAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKM+KCERR+NE VGSTDFVE
Sbjct: 1   MEYENKLILAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMVKCERRLNERVGSTDFVE 60

Query: 61  KGTDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSISGGM 120
           KGTDNVVFRTCSLER+QVVFQMGTSNA RALTAAQ+VC+DVAA+DINMGCPKSFSISGGM
Sbjct: 61  KGTDNVVFRTCSLERSQVVFQMGTSNAVRALTAAQIVCQDVAAVDINMGCPKSFSISGGM 120

Query: 121 GAALLSKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180
           GAALL+KPDLIHDILTTLRRNL+IPITCKIRLL+SSQDTVELARRIET GVSAL VHGRR
Sbjct: 121 GAALLNKPDLIHDILTTLRRNLNIPITCKIRLLSSSQDTVELARRIETIGVSALVVHGRR 180

Query: 181 VADRPRDPAKWSEIADVVAALSIPVVANGDVFEYADFQRIKVDTGASSVMVARGALWNAS 240
           VADRPRDPAKWSEIADVVAALSIPV+ANGD+FEYADFQR+KVDTGASSVMVARGALWNAS
Sbjct: 181 VADRPRDPAKWSEIADVVAALSIPVIANGDIFEYADFQRVKVDTGASSVMVARGALWNAS 240

Query: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300
           IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKS++LA
Sbjct: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSESLA 300

Query: 301 DLAKLYGEEKYYEFVQEKRLFNGSR 326
           DLAKLYGEEKY  FVQEKRLF+GSR
Sbjct: 301 DLAKLYGEEKYNLFVQEKRLFDGSR 325

[Close]

BLAST of Lcy04g016020 vs. NCBI nr
Match: XP_022962639.1 (tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 615.1 bits (1585), Expect = 3.4e-172
Identity = 304/325 (93.54%), Postives = 316/325 (97.23%), Query Frame = 0


Query: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVE 60
           MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVG+ DFVE
Sbjct: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGAVDFVE 60

Query: 61  KGTDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSISGGM 120
           KGTDNVVFRTCSLE+N+VVFQMGTSNA RAL+AAQLVC+DVAAIDINMGCPKSFSISGGM
Sbjct: 61  KGTDNVVFRTCSLEKNEVVFQMGTSNAVRALSAAQLVCQDVAAIDINMGCPKSFSISGGM 120

Query: 121 GAALLSKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180
           GAALL KPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR
Sbjct: 121 GAALLKKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180

Query: 181 VADRPRDPAKWSEIADVVAALSIPVVANGDVFEYADFQRIKVDTGASSVMVARGALWNAS 240
           VADRPRDPAKWSEIADVVAALS+PV+ANGD+FEY DF  IKV TGASSVMVARGALWNAS
Sbjct: 181 VADRPRDPAKWSEIADVVAALSVPVIANGDIFEYEDFHHIKVATGASSVMVARGALWNAS 240

Query: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300
           IFS +GKLPWE+VKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA
Sbjct: 241 IFSADGKLPWEEVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300

Query: 301 DLAKLYGEEKYYEFVQEKRLFNGSR 326
           DLAKLYGEEKY +FVQEKRLF+GSR
Sbjct: 301 DLAKLYGEEKYNQFVQEKRLFDGSR 325

[Close]

BLAST of Lcy04g016020 vs. NCBI nr
Match: XP_023517246.1 (tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 612.1 bits (1577), Expect = 2.8e-171
Identity = 303/325 (93.23%), Postives = 314/325 (96.62%), Query Frame = 0


Query: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVE 60
           MDYENKLVLAPMVRVGTLPFRLLAA YGADITYGEEIIDHKMIKCERRINEHVG+ DFVE
Sbjct: 1   MDYENKLVLAPMVRVGTLPFRLLAAHYGADITYGEEIIDHKMIKCERRINEHVGAVDFVE 60

Query: 61  KGTDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSISGGM 120
           KGTDNVVFRTCSLE+NQVVFQMGTSNA RAL+AAQLVC+DVAAIDINMGCPKSFSISGGM
Sbjct: 61  KGTDNVVFRTCSLEKNQVVFQMGTSNAVRALSAAQLVCQDVAAIDINMGCPKSFSISGGM 120

Query: 121 GAALLSKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180
           GAALL KPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR
Sbjct: 121 GAALLKKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180

Query: 181 VADRPRDPAKWSEIADVVAALSIPVVANGDVFEYADFQRIKVDTGASSVMVARGALWNAS 240
           VADRPRDPAKWSEIADVVAALS+PV+ANGD+FEY DF  IKV TGASSVMVARGALWNAS
Sbjct: 181 VADRPRDPAKWSEIADVVAALSVPVIANGDIFEYEDFHHIKVATGASSVMVARGALWNAS 240

Query: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300
           IFS +GKLPWE+VKREYVRKSI WDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA
Sbjct: 241 IFSADGKLPWEEVKREYVRKSISWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300

Query: 301 DLAKLYGEEKYYEFVQEKRLFNGSR 326
           DLAKLYGEEKY +FVQEKRLF+GSR
Sbjct: 301 DLAKLYGEEKYNQFVQEKRLFDGSR 325

[Close]

BLAST of Lcy04g016020 vs. TAIR 10
Match: AT3G49640.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 501.5 bits (1290), Expect = 5.0e-142
Identity = 239/312 (76.60%), Postives = 279/312 (89.42%), Query Frame = 0


Query: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVE 60
           MDY+NKLVLAPMVRVGTL FR+LAA+YGADITYGEEIIDHK++KCERR+N   G+++FVE
Sbjct: 1   MDYQNKLVLAPMVRVGTLSFRMLAAEYGADITYGEEIIDHKLVKCERRLNVASGTSEFVE 60

Query: 61  KGTDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSISGGM 120
           KGTDNVVF TC  E+++VVFQMGTS+A RAL A+++VC DVA IDINMGCPK+FSI GGM
Sbjct: 61  KGTDNVVFSTCDEEKSRVVFQMGTSDAVRALKASEIVCNDVATIDINMGCPKAFSIQGGM 120

Query: 121 GAALLSKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR 180
           GAALLSKP+LIHDIL TL+RNLD+P+TCKIRLL S  DTVELARRIE  GV ALAVHGR+
Sbjct: 121 GAALLSKPELIHDILATLKRNLDVPVTCKIRLLKSPADTVELARRIEKLGVPALAVHGRK 180

Query: 181 VADRPRDPAKWSEIADVVAALSIPVVANGDVFEYADFQRIKVDTGASSVMVARGALWNAS 240
           +ADRPRDPAKW EIADVVAALSIPV+ANGDV EY DF RIK  TGA+SVMVARGA+WNAS
Sbjct: 181 IADRPRDPAKWDEIADVVAALSIPVIANGDVLEYDDFSRIKTATGAASVMVARGAMWNAS 240

Query: 241 IFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAVIKSDTLA 300
           IFSP+GK  WEDVK++Y+RKSILW+ND+KSTK+T+KEMI H+SCLELPEGK++ K+DTL 
Sbjct: 241 IFSPKGKSHWEDVKKKYLRKSILWNNDVKSTKYTIKEMIAHHSCLELPEGKSINKADTLE 300

Query: 301 DLAKLYGEEKYY 313
           DLA+LY  E Y+
Sbjct: 301 DLARLYDLEDYF 312

[Close]

BLAST of Lcy04g016020 vs. TAIR 10
Match: AT3G49640.2 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 410.6 bits (1054), Expect = 1.2e-114
Identity = 196/259 (75.68%), Postives = 230/259 (88.80%), Query Frame = 0


Query: 54  GSTDFVEKGTDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKS 113
           G+++FVEKGTDNVVF TC  E+++VVFQMGTS+A RAL A+++VC DVA IDINMGCPK+
Sbjct: 15  GTSEFVEKGTDNVVFSTCDEEKSRVVFQMGTSDAVRALKASEIVCNDVATIDINMGCPKA 74

Query: 114 FSISGGMGAALLSKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSA 173
           FSI GGMGAALLSKP+LIHDIL TL+RNLD+P+TCKIRLL S  DTVELARRIE  GV A
Sbjct: 75  FSIQGGMGAALLSKPELIHDILATLKRNLDVPVTCKIRLLKSPADTVELARRIEKLGVPA 134

Query: 174 LAVHGRRVADRPRDPAKWSEIADVVAALSIPVVANGDVFEYADFQRIKVDTGASSVMVAR 233
           LAVHGR++ADRPRDPAKW EIADVVAALSIPV+ANGDV EY DF RIK  TGA+SVMVAR
Sbjct: 135 LAVHGRKIADRPRDPAKWDEIADVVAALSIPVIANGDVLEYDDFSRIKTATGAASVMVAR 194

Query: 234 GALWNASIFSPEGKLPWEDVKREYVRKSILWDNDIKSTKHTLKEMIMHYSCLELPEGKAV 293
           GA+WNASIFSP+GK  WEDVK++Y+RKSILW+ND+KSTK+T+KEMI H+SCLELPEGK++
Sbjct: 195 GAMWNASIFSPKGKSHWEDVKKKYLRKSILWNNDVKSTKYTIKEMIAHHSCLELPEGKSI 254

Query: 294 IKSDTLADLAKLYGEEKYY 313
            K+DTL DLA+LY  E Y+
Sbjct: 255 NKADTLEDLARLYDLEDYF 273

[Close]

BLAST of Lcy04g016020 vs. TAIR 10
Match: AT5G67220.1 (FMN-linked oxidoreductases superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 8.3e-28
Identity = 81/247 (32.79%), Postives = 121/247 (48.99%), Query Frame = 0


Query: 6   KLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVEKGTDN 65
           K ++APMV    LPFRLL  +YGA   Y   +      + E+  N+              
Sbjct: 89  KYIVAPMVDNSELPFRLLCQKYGAQAAYTPMLHSRIFTETEKYRNQE------------- 148

Query: 66  VVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRDVAAIDINMGCPKSFSISGGMGAALL 125
             F TC  +R   V Q   ++    L AA+ V      +DIN+GCP+  +  G  GA L+
Sbjct: 149 --FTTCKEDRPLFV-QFCANDPDTLLEAAKRVEPYCDYVDINLGCPQRIARRGNYGAFLM 208

Query: 126 SKPDLIHDILTTLRRNLDIPITCKIRLLNSSQDTVELARRIETTGVSALAVHGRR--VAD 185
               L+  ++  L +NL++P++CKIR+  + +DT++ A+ +E  G S LAVHGR     D
Sbjct: 209 DNLPLVKSLVEKLAQNLNVPVSCKIRIFPNLEDTLKYAKMLEDAGCSLLAVHGRTRDEKD 268

Query: 186 RPRDPAKWSEIADVVAALSIPVVANGDVFEYADFQRIKVDTGASSVMVARGALWNASIFS 245
             +  A WS I +V  A+ IPV+ANG+V    D      +TG   V+ A   L N + F+
Sbjct: 269 GKKFRADWSAIKEVKNAMRIPVLANGNVRCIEDVDNCIKETGVEGVLSAETLLENPAAFA 319

Query: 246 PEGKLPW 251
                 W
Sbjct: 329 GFRTAEW 319

[Close]

BLAST of Lcy04g016020 vs. TAIR 10
Match: AT4G38890.1 (FMN-linked oxidoreductases superfamily protein )

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-24
Identity = 90/309 (29.13%), Postives = 142/309 (45.95%), Query Frame = 0


Query: 1   MDYENKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMIKCERRINEHVGSTDFVE 60
           +D+ +KL LAP+  VG LPFR L    GAD+T GE      M  C   +         + 
Sbjct: 334 IDFRDKLYLAPLTTVGNLPFRRLCKVLGADVTCGE------MAMCTNLLQGQASEWALLR 393

Query: 61  KGTDNVVFRTCSLERNQVVFQMGTSNAARALTAAQLVCRD--VAAIDINMGCPKSFSISG 120
           + +   +F            Q+  S         +L+ R+  V  IDINMGCP    ++ 
Sbjct: 394 RHSSEDLFGV----------QICGSYPDTVSRVVELIDRECTVDFIDINMGCPIDMVVNK 453

Query: 121 GMGAALLSKPDLIHDILTTLRRNLDIPITCKIR--LLNSSQDTVELARRIETTGVSALAV 180
             G+ALL+KP  + +I+      ++ PIT K+R            L   I   G +A+ +
Sbjct: 454 SAGSALLNKPLRMKNIVEVSSSIVETPITIKVRTAFFEGKNRIDSLIADIGNWGATAVTI 513

Query: 181 HGRRVADRPRDPAKWSEIADVV--AALSIPVVANGDVFEYADFQRIKVD-TGASSVMVAR 240
           HGR    R    A W  I      A  ++ V+ NGDV+ Y D+ + K D    SS M+AR
Sbjct: 514 HGRSRQQRYSKSADWDYIYQCTKNATTNLQVIGNGDVYSYLDWNKHKSDCPELSSCMIAR 573

Query: 241 GALWNASIFSP-EGKLPWE-------DVKREYVRKSIL-WDND---IKSTKHTLKEMIMH 291
           GAL    IF+  + +  W+       ++ +++VR  +  W +D   +++T+H L E  + 
Sbjct: 574 GALIKPWIFTEIKEQRHWDITSGERLNIMKDFVRFGLQHWGSDTKGVETTRHFLLEW-LS 625

The following BLAST results are available for this feature:

BLAST of Lcy04g016020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NX74	8.0e-84	51.43	tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Homo sapiens OX=9606 GN=DUS2 ...	[more]
Q9D7B1	3.3e-82	50.48	tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Mus musculus OX=10090 GN=Dus2...	[more]
O74731	3.3e-53	39.45	tRNA-dihydrouridine(20) synthase [NAD(P)+] OS=Schizosaccharomyces pombe (strain ...	[more]
P53720	1.2e-42	36.58	tRNA-dihydrouridine(20) synthase [NAD(P)+] OS=Saccharomyces cerevisiae (strain A...	[more]
Q32M08	4.6e-31	33.59	tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like OS=Mus musculus OX=10090 GN...	[more]

BLAST of Lcy04g016020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KSI8	7.3e-173	93.85	tRNA-dihydrouridine synthase OS=Cucurbita maxima OX=3661 GN=LOC111497209 PE=3 SV...	[more]
A0A6J1BSD4	1.6e-172	92.92	tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 OS=Momordica charanti...	[more]
A0A6J1HHN5	1.6e-172	93.54	tRNA-dihydrouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111463056 PE=3 ...	[more]
A0A1S3B193	6.8e-171	92.62	tRNA-dihydrouridine synthase OS=Cucumis melo OX=3656 GN=LOC103484905 PE=3 SV=1	[more]
A0A0A0KGL3	4.1e-168	91.38	tRNA-dihydrouridine synthase OS=Cucumis sativus OX=3659 GN=Csa_6G497190 PE=3 SV=...	[more]

BLAST of Lcy04g016020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023003695.1	1.5e-172	93.85	tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 [Cucurbita maxima]	[more]
KAG6594928.1	3.4e-172	93.54	tRNA-dihydrouridine(20) synthase [NAD(P)+]-like protein, partial [Cucurbita argy...	[more]
XP_022132400.1	3.4e-172	92.92	tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 [Momordica charantia]	[more]
XP_022962639.1	3.4e-172	93.54	tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 [Cucurbita moschata]	[more]
XP_023517246.1	2.8e-171	93.23	tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 [Cucurbita pepo subsp...	[more]

BLAST of Lcy04g016020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49640.1	5.0e-142	76.60	Aldolase-type TIM barrel family protein	[more]
AT3G49640.2	1.2e-114	75.68	Aldolase-type TIM barrel family protein	[more]
AT5G67220.1	8.3e-28	32.79	FMN-linked oxidoreductases superfamily protein	[more]
AT4G38890.1	2.5e-24	29.13	FMN-linked oxidoreductases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001269	tRNA-dihydrouridine synthase	PIRSF	PIRSF006621	Dus	coord: 1..320 e-value: 9.2E-59 score: 197.0
IPR035587	DUS-like, FMN-binding domain	PFAM	PF01207	Dus	coord: 8..282 e-value: 4.1E-58 score: 196.9
IPR035587	DUS-like, FMN-binding domain	CDD	cd02801	DUS_like_FMN	coord: 6..250 e-value: 1.07966E-95 score: 281.305
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 1..247 e-value: 6.6E-77 score: 260.0
None	No IPR available	PIRSR	PIRSR006621-1	PIRSR006621-1	coord: 3..257 e-value: 3.1E-58 score: 195.0
None	No IPR available	PANTHER	PTHR45936	TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE	coord: 1..317
None	No IPR available	SUPERFAMILY	51395	FMN-linked oxidoreductases	coord: 5..281
IPR018517	tRNA-dihydrouridine synthase, conserved site	PROSITE	PS01136	UPF0034	coord: 104..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g016020.1	Lcy04g016020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002943	tRNA dihydrouridine synthesis
biological_process	GO:0008033	tRNA processing
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0017150	tRNA dihydrouridine synthase activity
molecular_function	GO:0003824	catalytic activity