Lcy04g015830 (gene) Sponge gourd (P93075) v1

Overview
NameLcy04g015830
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr04: 48121429 .. 48126355 (-)
RNA-Seq ExpressionLcy04g015830
SyntenyLcy04g015830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGCCATCTAAGCTATATTACGTTGTATCATGTGAATAGCCTTCCAAGTTGTCTCCAGGTTTTCCTCATCCTCGCCCTTCTAGTGATCGGATGCCCTCAAGGAGCCCCTGTATGCTCATGAAAGTTTTTAATAATAATACGCAACCATGTCAACATTTGCGCCCTGTGCTTCATATGCAGATAGAGTCCCCCCCACCCACCAAACAGCAGGATTGTGATTAGATTAACTATATAACAAATGCATACGTCAATGGTTCTGGTTCTTCTATCCTAATTGCTTAAGTAACTTAGGAAATGGCTTTTGTTAGCTTCTCATATGTCTTAGAATTGTGCCTGGTTTGCTTGATATCGTTCAAGAAAATAGGGAAAAAGAGCCGAATGATTTCTATATTTGCCAGTAAAAAAATCCTGCAGTAGGCTATATGAGTGGGTTCTGGCTAGGAAAGTATATTTGACATAGACCTCGTGCTATTTTGATAAATTTCGTGTCTGCACAATTTTGATCAGAATTGATATTATTTCGTTTGTGCAAAATGCTTTTTTATCTAGCCATTAGGTATTTAGTCCACGACATATTATATGAGCAAGGTATAAAAGCTGGAGTACTTTGTAGGTTGATCTGTCTGAAATTAATGGTTGGCATAAAATTGAACTCATGCCGTCACTTCCATATGGTCTTTGTAATCAACTGGGCCACCATCTCCTCGAATCATTATGTGTTTGATATCTTCTGCTAATAGATTGGATACCACGTATCCGTTCTCTAGAAGTGTTGGTTAGGCCAATTTCTATGCTGCTTTATTTTATCTTTGTAGTTCTATAGAAGTGTTGGTTTGGCCAATTTCTATGCTGCTTCATTTTATCTGGTAGTTTCACCGTAACAACAACTGATCCTTTTCTTAAGAAGGTTAATGACTTTATTAAGTTCTTAATCTTTCTCTCTTTACTGTTTGGTCCACCTGATTCAGCAAAGGACAATATAGCTAAATACCTTTTCTGAAATATATAGCTAAATACCTTTTGTTCGTTTTCCTTCTATTTTGTTCTTCCTTCTTTTCGGTTGAAGAGGGGGGGACTCCATGTTTTCTCTTCCTTCTATACTGTCGTATAGCAGCTTACATTTCATTCATAAGTTTTTTTGGTAAGGCACACAACTTTTTATTGAAGACTATAATACAAAGGGTCAGATAAAACATCCTCTCGTCCCTGCCAACTAAGATTACAGGAATTCCTTAACCAAAAGACGATATAGTTATGAAATCATTTAGACAAAGGAATGACCTTCAATTGGCCTGGATATCATAGAATTAAGTATCTGCTGTTCATATTATCTGAAGACTCAAAGTTCCACCTTCTACCAATGCAAGATGAATGAGTGTGATGGTACCTGCCTTAAGTAATATAAACACCTATTATCCAATCTCTCTTGCTGATGAATGCATAGCATAGATTTAGAGGCTCTTGGCTGGGTATGTTTGTGAGAGTTGTTTTTGAACATCAACACGTACAGAGGGCTTCTAGCTCCATGAATGTAAAGTGTAGCACATTTTGAAGTTGCTCGAGAAGATAGCACTACAGAAAACAAAAGTTCTGCAACTCATGCCATTCTAGCAGATTTATGGACAATAGTTTAGTCTTACGGAGCAGTGTTGCATTGGGGTAAAAGGCTAGTGAAAATCCTTATAATTTTTTAAACCATGTCGAGTAAAAAATGATACAATGGTCATTCTTAACCTGATTTGTCTGGAATTTGAAGTTTTCGTATGATTAATAGCAACTTAATGCAAGTAAAATGGCCGGTGCAGTTGAGTAGCCAATCTACAGTGGCACTCTGGATCATGAAAATCCTGGCTACTTAATTATTAATTTTGCCCCTGCTACATTAGGACGCTCCTCTTTCTTTATCTAAGGATTTGCTTCCGTAAGGTTTCTCTTTCATTCAAGTTCAACATCTTGGATTTGCAGACCTTCACTTGCATGGCCTTCTTAGGTATATGGGAGGGATGCTATCCGTGCAGCAGGTGGATAGAATTAAGCCTCTACTATAGTTTATAAAGTTTTAGGATGAATCTGAAGAAATCAGTTGAAATTTCTTTTCACGGTCATTGATAGCTTTGATGAATTTTCTGATGAAAGCTTTTTATTCAGTAAACTATACTTATGGTTGCAGTATTCTTGGCTGGCTTGAATCATACACGTTAGGATTTTGCTTCTATGATTATGTGTTATAAAATTAACATTCTAAATCTTCCTATGAAAAAAATTAACATCCTGAATCCTCATCTTCCGCTGTTCAAAATGAAGTGAAACTTTTTAGGTAGAATCAGTAAGGAGTTTAGTTTCTAAAGAAAGCTCTTAATCAGTAGATCATTTTTTTTTATTGTTGCTGTTGCTGCTATTATTATTTATTTCAGGATTGTTGGTTGGCTTGAATCCACACGTGTTAGGATATACACGTACTTCTACAATTATGTATTTTGGAACTAACATCTCAAGTCCATGACTTCTACAATTTGCTATTGTCTTGAAATTTTGTTCATGCAACCGTGCAACCTTTTCTTGTTAGCCTGTCTGACTTTCTTACCTAGGAAAGGTTCTTTGCCCTTTCTAGGATTTGAAATGCAAGGGGTTAGCCACTCTTTTTCTTTCCCAATTTCACTCAGCCATATGGCTCCATAGTCTATGACGCCCCCCCACCCACCCAAAAAAAATGGATATAATAATAATAAAAGAAACAAGCACAAAAGGATCAGGAAAAAGAAACAGCAAAAAATGAAGGAGATCCTGTGGCTAGTAGGCGTGCAGTGACGAATAATATGGGCGTGGTAGGTCGAAACTTCAGATTTACAGGCAGATAAGAGCAAGAAGTGATTGAATGGCTGTGTCTATGAATTCAAACCTACTCGGTCAGTTGAGGCCGTGTAGGAACCCTGGAAGCACAGTTTCATGTGCTTCATTTTCTCTATTCAGTATTGGACTTTCACTGTTTTAGTAGCTAGCATTGTACACGAATGAGGACAATAAATAAGTGAATGTTTTAATGTTCCGCTAACAGTATGCTAATATTAATACAGTTTTCTTGGTATCTGCGTTCTTTTTTATGTTCAAAAGTGAAGATGTCAACAAAACCTCTTTATTCATGATCAGTGTACAACTTATTCTTTGACCATCTTGGGCGACCACCTCCTGCAGAAGACCAAGTATCAAGGAGTTCACATGTTATTGTTAAGTCGGAAATATATCAGGAAAATGAGAAAACTTGTCCTTGTCTATGTATATACATATCGATTGTAGCAAAAGAGAACTTTGGATGAGGTGAGCCGGACAAAGCTTTGTAGTAGATCATGGTTGCACGTGGAGACTGTCAGAGGAGGAAGGTTGCTTTTAGGTTTAATGAGAGGTAATGGGCATAATTTGGCAAATCCATCCTGCTTGGTAGTAATCAAAATGAATAGGGAATGAGCATCCGCCATCCTTCTATCTCTAGGAATGCTTGGATTACTGTCAATGAAGTGGATAAATTCAAACTTGTTGGTCCCCGGAAGCTTTTTTCTTTTTAGGTGTGTAGGAACTTTCTTATGCACCCCATTACAATCTTGACAACTAAGAGAGAGAAAAGTAGAAAATGAAAACTTATTTCTCTCCTAATTGTCAATACTTTGATAGTTATGTGTAGGTAGATCTCTACACATCAGTATGCAACCAAGTATTGTCTTTTTCTTTTTTCTTTCTTAAGAATTTCAACTAGTATGCCTTCATATTATGAGAAATGTTTTAGTTAATTCATAGGGAAGTCTAATTAACAATCATGGGATGCCCCTCCCATTGATTAGAGTGACATGTATGTTTCATCTATTGATCAAGTAGGTTAAAATTAAGGCTAAAATGTATTGTTGGTTAGGTATGTAGAATCAAAATTGAAAATAACCATTTATCTTTATTAGTTTAGAAAGCAAGGTATGAAATAGTCGGGTATTTTGTCGATCAGTGGTAATAGCAAGAACCAAGGGTATGTCTACTTTAAAGTTTAGAAGCTTTTTCAATATTTAGAGATTCAATAGATATAATCTTCAAAGTACTAGAGCAAATTACATGATTTGATATTTATATCTTCCTTTCAGCTCCTCTCTATCTCTCATTCATTATTGTTGATTTATTTACTTAATGAGACAAAAGTTGAGACATAAAAAGAGGGTGTAAGGAAGTTAAAGTTGGTAGTTTTTTAGATATTTTTTTGGTTGGAAGTGTGTGGCTGGTATTGCTTGGCTGTTTTTTCTTAAAAGAAAGTGCAGAGTGCAGTCTCTGTACAGCATCAAATTTACACAGACTTGAATTTTATCCTTCCTTATACTGTTTTATTTTCTTAAAAGAATGCAAGTTTTCATTTCGATACAAATACAAGTACTTTGATAGCATAATGAGCCTGGACCCAGGAGAGCTGGAACCAAGCTGTGAATATCTTCTTGCACCAGACAGAATCAATACATAATAGAAACCAGTGGATTTCAAATGGTGGGTGTGTGTTTGGTTGAATGATAACTTCTTGTCCATGAGCCTTAACTGAGGGCTGCATTCTTTTTGAAACATGCAGGTATTGTGTAGCAATATTCATTAAATGCCCTTGTCTTCAGATAAGAAAGCAACTACTCAAAAGGAGAAGGGTTCAGCAGAAGAAGCAACCATGTTCAGTGCAGTGGCCAAGTTTTTGGGCAATCTGGAAGAAGGCTTTCTTTTTTGTGAAATGTGTGGAAAAAGCCATGGAAGATGGCAATATACGGTTTCTGATTGGGAAAGTGATTCTCATTTATGAGATGAGAATGATGGCAATATCAGTTGTGGCCGTGGGGGAGAAGGATTATGAGTATGGCCCAGCTGGGGAAGTGGGTAGAAAAATGAAGTTGGGTTGTTTTCAACGCTTTTAG

mRNA sequence

ATGGAGAGCCATCTAAGCTATATTACGTTGTATCATGTGAATAGCCTTCCAAGTTGTCTCCAGGTTTTCCTCATCCTCGCCCTTCTAGTGATCGGATGCCCTCAAGGAGCCCCTTTCTATAGAAGTGTTGGTTTGGCCAATTTCTATGCTGCTTCATTTTATCTGACTCAAAGTTCCACCTTCTACCAATGCAAGATGAATGAGTGTGATGGTACCTGCCTTAAGATTGTTGGTTGGCTTGAATCCACACGTGTTAGGATATACACGTATTGTGTAGCAATATTCATTAAATGCCCTTGTCTTCAGATAAGAAAGCAACTACTCAAAAGGAGAAGGGTTCAGCAGAAGAAGCAACCATGTTCAGTGCAGTGGCCAAGTTTTTGGGCAATCTGGAAGAAGGCTTTCTTTTTTGTGAAATGTGTGGAAAAAGCCATGGAAGATGGCAATATACGGTTTCTGATTGGGAAAGTGATTCTCATTTATGAGATGAGAATGATGGCAATATCAGTTGTGGCCGTGGGGGAGAAGGATTATGAGTATGGCCCAGCTGGGGAAGTGGGTAGAAAAATGAAGTTGGGTTGTTTTCAACGCTTTTAG

Coding sequence (CDS)

ATGGAGAGCCATCTAAGCTATATTACGTTGTATCATGTGAATAGCCTTCCAAGTTGTCTCCAGGTTTTCCTCATCCTCGCCCTTCTAGTGATCGGATGCCCTCAAGGAGCCCCTTTCTATAGAAGTGTTGGTTTGGCCAATTTCTATGCTGCTTCATTTTATCTGACTCAAAGTTCCACCTTCTACCAATGCAAGATGAATGAGTGTGATGGTACCTGCCTTAAGATTGTTGGTTGGCTTGAATCCACACGTGTTAGGATATACACGTATTGTGTAGCAATATTCATTAAATGCCCTTGTCTTCAGATAAGAAAGCAACTACTCAAAAGGAGAAGGGTTCAGCAGAAGAAGCAACCATGTTCAGTGCAGTGGCCAAGTTTTTGGGCAATCTGGAAGAAGGCTTTCTTTTTTGTGAAATGTGTGGAAAAAGCCATGGAAGATGGCAATATACGGTTTCTGATTGGGAAAGTGATTCTCATTTATGAGATGAGAATGATGGCAATATCAGTTGTGGCCGTGGGGGAGAAGGATTATGAGTATGGCCCAGCTGGGGAAGTGGGTAGAAAAATGAAGTTGGGTTGTTTTCAACGCTTTTAG

Protein sequence

MESHLSYITLYHVNSLPSCLQVFLILALLVIGCPQGAPFYRSVGLANFYAASFYLTQSSTFYQCKMNECDGTCLKIVGWLESTRVRIYTYCVAIFIKCPCLQIRKQLLKRRRVQQKKQPCSVQWPSFWAIWKKAFFFVKCVEKAMEDGNIRFLIGKVILIYEMRMMAISVVAVGEKDYEYGPAGEVGRKMKLGCFQRF
Homology
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BLAST of Lcy04g015830 vs. NCBI nr
Match: KAG6604095.1 (Cysteine desulfurase, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 68.6 bits (166), Expect = 7.1e-08
Identity = 33/54 (61.11%), Postives = 38/54 (70.37%), Query Frame = 0 

Query: 74  LKIVGWLESTRVRIYTYCVAIFIKCPCLQIRKQLLKRRRVQQKKQPCSVQWPSF 128
           LK +G L  T   +  YCVAI IKCPCLQ RKQLLKRR    ++ PC+VQWPSF
Sbjct: 151 LKSIGALNLTNAFLRRYCVAISIKCPCLQRRKQLLKRRGGSAEEAPCAVQWPSF 204

The following BLAST results are available for this feature:
BLAST of Lcy04g015830 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy04g015830 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy04g015830 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6604095.17.1e-0861.11Cysteine desulfurase, mitochondrial, partial [Cucurbita argyrosperma subsp. soro... [more]
BLAST of Lcy04g015830 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy04g015830.1Lcy04g015830.1mRNA