Lcy04g013370 (gene) Sponge gourd (P93075) v1

Overview
NameLcy04g013370
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr04: 45434413 .. 45435087 (+)
RNA-Seq ExpressionLcy04g013370
SyntenyLcy04g013370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAGAATCGTCTTGTTCGCGTAATTCGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGCTGAGCAACGAGGACGACAGTAGCAGCAATGTCGTCACGGCGGAGAACAAGAACAAGAACAAGAGCAAGAAGATGAAGAAGGATCACAGCGGCGGCGGTGGCGGTGGAGAGGAGGAGGTTGATCAGAAGAGATGCCAAATTGAGACGTCGATTTGGCTGAAAATCGAAGAGATTTTTGGGAAAGATGACGAAGAAGGTTGTGATTTCGTTTGTCGCCCCAAGAAGAGACGGTTTCGATCCATCCAAAGCATATATATGACGACTAAACCTATCGTTAATGGTAGATTCTCCGGCAAGGGGATCGTCGGGACGTGAAGACGGCGACGGTGGCGATGGAGTGCCGTGGCGGAGATTTGATGGGGTTTGTGGGATTAGCTTAGAATCAACTAATTGGAGTTTCAAGTTCCAACAAGGATGATACCGGTCAACACGAGCATAATTCAATGGTCAGACATTTTTACTTTCTGACAGAGTCACAAGTTCTAATTCTCCCACCAAAGAAAGTGAGCTGGAGATTTGAATTATCTGATTCGAAGTTTTGAATGTTTTAACCGATTGAATTATATTCATGTTGATAGTTTAGTGATTTTCGAAAATGTAGGTCGC

mRNA sequence

ATGGAAGAAGAATCGTCTTGTTCGCGTAATTCGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGCTGAGCAACGAGGACGACAGTAGCAGCAATGTCGTCACGGCGGAGAACAAGAACAAGAACAAGAGCAAGAAGATGAAGAAGGATCACAGCGGCGGCGGTGGCGGTGGAGAGGAGGAGGTTGATCAGAAGAGATGCCAAATTGAGACGTCGATTTGGCTGAAAATCGAAGAGATTTTTGGGAAAGATGACGAAGAAGGTTGTGATTTCGTTTGTCGCCCCAAGAAGAGACGGTTTCGATCCATCCAAAGCATATATATGACGACTAAACCTATCGTTAATGGTAGATTCTCCGGCAAGGGGATCGTCGGGACGTGAAGACGGCGACGGTGGCGATGGAGTGCCGTGGCGGAGATTTGATGGGGTTTGTGGGATTAGCTTAGAATCAACTAATTGGAGTTTCAAGTTCCAACAAGGATGATACCGGTCAACACGAGCATAATTCAATGGTCAGACATTTTTACTTTCTGACAGAGTCACAAGTTCTAATTCTCCCACCAAAGAAAGTGAGCTGGAGATTTGAATTATCTGATTCGAAGTTTTGAATGTTTTAACCGATTGAATTATATTCATGTTGATAGTTTAGTGATTTTCGAAAATGTAGGTCGC

Coding sequence (CDS)

ATGGAAGAAGAATCGTCTTGTTCGCGTAATTCGGAGGAGGTATTGGGTGCGGCGCAGCAGTTGATGCAGCTGAGCAACGAGGACGACAGTAGCAGCAATGTCGTCACGGCGGAGAACAAGAACAAGAACAAGAGCAAGAAGATGAAGAAGGATCACAGCGGCGGCGGTGGCGGTGGAGAGGAGGAGGTTGATCAGAAGAGATGCCAAATTGAGACGTCGATTTGGCTGAAAATCGAAGAGATTTTTGGGAAAGATGACGAAGAAGGTTGTGATTTCGTTTGTCGCCCCAAGAAGAGACGGTTTCGATCCATCCAAAGCATATATATGACGACTAAACCTATCGTTAATGGTAGATTCTCCGGCAAGGGGATCGTCGGGACGTGA

Protein sequence

MEEESSCSRNSEEVLGAAQQLMQLSNEDDSSSNVVTAENKNKNKSKKMKKDHSGGGGGGEEEVDQKRCQIETSIWLKIEEIFGKDDEEGCDFVCRPKKRRFRSIQSIYMTTKPIVNGRFSGKGIVGT
Homology
BLAST of Lcy04g013370 vs. ExPASy TrEMBL
Match: A0A6J1BYI0 (uncharacterized protein LOC111005872 OS=Momordica charantia OX=3673 GN=LOC111005872 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.9e-40
Identity = 98/132 (74.24%), Postives = 105/132 (79.55%), Query Frame = 0

Query: 1   MEEESSCSRNSEEVLGAAQQLMQLSNEDDSSSNVVTAENKNKNKSKKMKKDHSGGGGGGE 60
           MEEESSCSRN EEVLGAAQQLMQLSNEDDSSSNVVTAE K  NK +       GGG GGE
Sbjct: 1   MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKKNNKKR-------GGGDGGE 60

Query: 61  EEVDQKRCQIETSIWLKIEEIFGKDD---EEGCDFVCRPKKR--RFRSIQSIYMTTKPIV 120
           EEVDQKRCQIE SIW KIEEIFGK++   EE  + +CRPKKR  RFRSIQSIYMTTKPI+
Sbjct: 61  EEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMTTKPII 120

Query: 121 NGRFSGKGIVGT 128
           N RFSG  I+ T
Sbjct: 121 NARFSGNRIIPT 125

BLAST of Lcy04g013370 vs. ExPASy TrEMBL
Match: A0A5A7SLI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00160 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.4e-33
Identity = 95/134 (70.90%), Postives = 102/134 (76.12%), Query Frame = 0

Query: 1   MEEESSCSRNSEEVLGAAQQLMQLSNEDDSSS-NVVTAENKNKNKSKKMKKDHSGGGGGG 60
           MEEESS SRNSEEVLGAAQQLMQLSN+D+SS+ +VV A  KNK      KKD   GGGG 
Sbjct: 1   MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNK------KKD-CCGGGGR 60

Query: 61  EEEVDQKRCQIETSIWLKIEEIFGKDDEEGCD------FVCRPKKRRFRSIQSIYMTTKP 120
           EEEVDQKRCQIE+SIWLKIEEIFGKD+   CD         RPKKRRFRSIQSIYM TKP
Sbjct: 61  EEEVDQKRCQIESSIWLKIEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKP 120

Query: 121 -IVNGRFSGKGIVG 127
            I NGRFS K +VG
Sbjct: 121 MITNGRFSTKTMVG 127

BLAST of Lcy04g013370 vs. ExPASy TrEMBL
Match: A0A6J1GFL5 (uncharacterized protein LOC111453726 OS=Cucurbita moschata OX=3662 GN=LOC111453726 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.7e-30
Identity = 88/123 (71.54%), Postives = 94/123 (76.42%), Query Frame = 0

Query: 10  NSEEVLGAAQQLMQLSNEDDS-----SSNVVTAENKNKNKSKKMKKDHSG--GGGGGEEE 69
           +SEEVL AAQ LMQLS EDD      SSNVV A  K KN  KK+KK H G  G GG EEE
Sbjct: 5   SSEEVLVAAQLLMQLSIEDDDDDDNCSSNVVVAVEKMKN--KKLKKGHGGDRGDGGEEEE 64

Query: 70  VDQKRCQIETSIWLKIEEIFGKDDEEGCDF--VCRPKKRRFRSIQSIYMTTKPIVNGRFS 124
           VDQKR QIETSIWLKIEEIFGKDDEE  DF  +CRPKKRRFRS+QSIY+TTKPI NGRF 
Sbjct: 65  VDQKRYQIETSIWLKIEEIFGKDDEEQ-DFNSICRPKKRRFRSLQSIYVTTKPIGNGRFP 124

BLAST of Lcy04g013370 vs. ExPASy TrEMBL
Match: A0A0A0KFU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486710 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.8e-25
Identity = 79/115 (68.70%), Postives = 86/115 (74.78%), Query Frame = 0

Query: 1   MEEESSCSRNSEEVLGAAQQLMQLSNEDDSSS-NVVTAENKNKNKSKKMKKDHSGGGGGG 60
           MEEESS S NSEEVLGAAQQLMQLSN+D+SS+ +VV AE K KNK K    D  GGGG  
Sbjct: 1   MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAK-KNKKKDFGGDGGGGGGCR 60

Query: 61  EEEVDQKRCQIETSIWLKIEEIFGKDDEEGCDFVC---------RPKKRRFRSIQ 106
           EEEVDQKRCQIE+S+WLKIEEIFGKD+E   D  C         RPKKRRFRSIQ
Sbjct: 61  EEEVDQKRCQIESSVWLKIEEIFGKDNEG--DHCCHHHSSIINSRPKKRRFRSIQ 112

BLAST of Lcy04g013370 vs. ExPASy TrEMBL
Match: A0A6J5V3C5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS38002 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.1e-11
Identity = 54/114 (47.37%), Postives = 72/114 (63.16%), Query Frame = 0

Query: 11  SEEVLGAAQQLMQLSNEDDSSSNVVTAENKNKNKSKKMKKDHSGGGGGGEEEVDQKRCQI 70
           +E  L AAQQLMQLS+E D+++N  ++ +   NK+ K    H G      EEVDQ R  I
Sbjct: 16  TESELAAAQQLMQLSDE-DNNNNSSSSSSSRSNKNTK----HEG------EEVDQ-RPLI 75

Query: 71  ETSIWLKIEEIFGKDDEEGCDFVCRPKKRRFRSIQSIYMTTKPIVNGRFSGKGI 125
              IW KIEEIFGK+++     V RPKKRR+RS+ SIY+T+KP+  G   GK +
Sbjct: 76  NVIIWAKIEEIFGKEED-----VDRPKKRRYRSLASIYLTSKPVNAGSAHGKKV 112

BLAST of Lcy04g013370 vs. NCBI nr
Match: KAG6595108.1 (hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 183.7 bits (465), Expect = 9.7e-43
Identity = 103/129 (79.84%), Postives = 107/129 (82.95%), Query Frame = 0

Query: 2   EEESSCSRNSEEVLGAAQQLMQLSNEDDSSSNVVTAENKNKNKSKKMKKDHSGGGGGGEE 61
           EE SSCSRNSEEVL AAQQL+QLSNEDDSSSNVVTAENK K K  K KK+  GG GG EE
Sbjct: 3   EESSSCSRNSEEVLDAAQQLVQLSNEDDSSSNVVTAENKKKKKIMK-KKEDGGGDGGEEE 62

Query: 62  EVDQKRCQIETSIWLKIEEIFGK---DDEEGCDFVCRPKKRRFRSIQSIYMTTKPIVNGR 121
           EVDQKRCQIETSI  KIEEIFGK   DDEEGC  +CRP KRRFRSIQSIYM TKP+VN R
Sbjct: 63  EVDQKRCQIETSICSKIEEIFGKDDDDDEEGCGSICRPNKRRFRSIQSIYMNTKPLVNAR 122

Query: 122 FSGKGIVGT 128
           FSGKGIV T
Sbjct: 123 FSGKGIVQT 130

BLAST of Lcy04g013370 vs. NCBI nr
Match: XP_022133223.1 (uncharacterized protein LOC111005872 [Momordica charantia])

HSP 1 Score: 173.7 bits (439), Expect = 1.0e-39
Identity = 98/132 (74.24%), Postives = 105/132 (79.55%), Query Frame = 0

Query: 1   MEEESSCSRNSEEVLGAAQQLMQLSNEDDSSSNVVTAENKNKNKSKKMKKDHSGGGGGGE 60
           MEEESSCSRN EEVLGAAQQLMQLSNEDDSSSNVVTAE K  NK +       GGG GGE
Sbjct: 1   MEEESSCSRNMEEVLGAAQQLMQLSNEDDSSSNVVTAEKKKNNKKR-------GGGDGGE 60

Query: 61  EEVDQKRCQIETSIWLKIEEIFGKDD---EEGCDFVCRPKKR--RFRSIQSIYMTTKPIV 120
           EEVDQKRCQIE SIW KIEEIFGK++   EE  + +CRPKKR  RFRSIQSIYMTTKPI+
Sbjct: 61  EEVDQKRCQIEASIWSKIEEIFGKEEEELEEDRNSICRPKKRRSRFRSIQSIYMTTKPII 120

Query: 121 NGRFSGKGIVGT 128
           N RFSG  I+ T
Sbjct: 121 NARFSGNRIIPT 125

BLAST of Lcy04g013370 vs. NCBI nr
Match: XP_031742655.1 (uncharacterized protein LOC116404425 [Cucumis sativus])

HSP 1 Score: 154.5 bits (389), Expect = 6.3e-34
Identity = 95/136 (69.85%), Postives = 103/136 (75.74%), Query Frame = 0

Query: 1   MEEESSCSRNSEEVLGAAQQLMQLSNEDDSSS-NVVTAENKNKNKSKKMKKDHSGGGGGG 60
           MEEESS S NSEEVLGAAQQLMQLSN+D+SS+ +VV AE K KNK K    D  GGGG  
Sbjct: 1   MEEESSSSPNSEEVLGAAQQLMQLSNDDNSSNVDVVVAEAK-KNKKKDFGGDGGGGGGCR 60

Query: 61  EEEVDQKRCQIETSIWLKIEEIFGKDDEEGCDFVC---------RPKKRRFRSIQSIYMT 120
           EEEVDQKRCQIE+S+WLKIEEIFGKD+E   D  C         RPKKRRFRSIQSIYM 
Sbjct: 61  EEEVDQKRCQIESSVWLKIEEIFGKDNEG--DHCCHHHSSIINSRPKKRRFRSIQSIYMK 120

Query: 121 TKPIVNGRFSGKGIVG 127
           TKPI NGRFS K +VG
Sbjct: 121 TKPITNGRFSTKTMVG 133

BLAST of Lcy04g013370 vs. NCBI nr
Match: KAA0025567.1 (hypothetical protein E6C27_scaffold253G00560 [Cucumis melo var. makuwa] >TYK12441.1 hypothetical protein E5676_scaffold255G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 150.6 bits (379), Expect = 9.1e-33
Identity = 95/134 (70.90%), Postives = 102/134 (76.12%), Query Frame = 0

Query: 1   MEEESSCSRNSEEVLGAAQQLMQLSNEDDSSS-NVVTAENKNKNKSKKMKKDHSGGGGGG 60
           MEEESS SRNSEEVLGAAQQLMQLSN+D+SS+ +VV A  KNK      KKD   GGGG 
Sbjct: 1   MEEESSSSRNSEEVLGAAQQLMQLSNDDNSSNVDVVVAAKKNK------KKD-CCGGGGR 60

Query: 61  EEEVDQKRCQIETSIWLKIEEIFGKDDEEGCD------FVCRPKKRRFRSIQSIYMTTKP 120
           EEEVDQKRCQIE+SIWLKIEEIFGKD+   CD         RPKKRRFRSIQSIYM TKP
Sbjct: 61  EEEVDQKRCQIESSIWLKIEEIFGKDEGGCCDHHHSSIINSRPKKRRFRSIQSIYMKTKP 120

Query: 121 -IVNGRFSGKGIVG 127
            I NGRFS K +VG
Sbjct: 121 MITNGRFSTKTMVG 127

BLAST of Lcy04g013370 vs. NCBI nr
Match: KAG6604263.1 (hypothetical protein SDJN03_04872, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 142.5 bits (358), Expect = 2.5e-30
Identity = 88/123 (71.54%), Postives = 94/123 (76.42%), Query Frame = 0

Query: 10  NSEEVLGAAQQLMQLSNEDDS-----SSNVVTAENKNKNKSKKMKKDHSG--GGGGGEEE 69
           +SEEVL AAQ LMQLS EDD      SSNVV A  K KN  KK+KK H G  G GG EEE
Sbjct: 5   SSEEVLVAAQLLMQLSIEDDDDDDNCSSNVVVAAEKKKN--KKLKKGHGGDRGDGGEEEE 64

Query: 70  VDQKRCQIETSIWLKIEEIFGKDDEEGCDF--VCRPKKRRFRSIQSIYMTTKPIVNGRFS 124
           VDQKR QIETSIWLKIEEIFGKDDEE  DF  +CRPKKRRFRS+QSIY+TTKPI NGRF 
Sbjct: 65  VDQKRYQIETSIWLKIEEIFGKDDEEE-DFNSICRPKKRRFRSLQSIYITTKPIGNGRFP 124

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1BYI04.9e-4074.24uncharacterized protein LOC111005872 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A5A7SLI94.4e-3370.90Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1GFL52.7e-3071.54uncharacterized protein LOC111453726 OS=Cucurbita moschata OX=3662 GN=LOC1114537... [more]
A0A0A0KFU15.8e-2568.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G486710 PE=4 SV=1[more]
A0A6J5V3C52.1e-1147.37Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS38002 PE=4 S... [more]
Match NameE-valueIdentityDescription
KAG6595108.19.7e-4379.84hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022133223.11.0e-3974.24uncharacterized protein LOC111005872 [Momordica charantia][more]
XP_031742655.16.3e-3469.85uncharacterized protein LOC116404425 [Cucumis sativus][more]
KAA0025567.19.1e-3370.90hypothetical protein E6C27_scaffold253G00560 [Cucumis melo var. makuwa] >TYK1244... [more]
KAG6604263.12.5e-3071.54hypothetical protein SDJN03_04872, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..39

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy04g013370.1Lcy04g013370.1mRNA