Lcy04g012970 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g012970
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic
Location	Chr04: 44828249 .. 44832407 (+)
RNA-Seq Expression	Lcy04g012970
Synteny	Lcy04g012970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTCTCTGCAACTCTTTTTAACAACTCTTTCTCATGCCTCAATCAGTTCCCCCAAAGTTTTAGAAGAAACCCACTTCGTTTTCGCCCCATTCGAGCCGTGAAATCCACTGAACCGGAGAACAAGGTATCGGAGACGAAAACCCAGGAGCCTCCCAATGCTGAACCTTCAACTTCAAGCTCCTCCGCCGCCGCCGCTCCCAAGGTTCCCAAGAAGCCCGTCTATTCGAGTGAGTTTCTTTTTGCTATTTTGCTCTCGTCTTGCCTGAATTTGACGATTCTATTTAGATTTGTTGATTTTGTTTTAATATGCTTTCTGTAGTGAAGAAGGGTCAGATTGTGAGAGTTGATAAAGAGAAGTATCTTAATAGCGTTAATGTAAGTGGTTTTCTGGATTTTTTCTTTTTTTGGGTGGTAATGAGTTATCTTTTTACAAGTTTATAAATTAACCAAAAAATTATTAATTCAGTGCAATAATACCCAAGCAAGGAGAAAGCTTCTTCGTAATTTGCTTCATTGCTTGTTATTTTTGTTTTTGTAATCCTCATATCTCCAATTCAGATATATGCCCCCTGTGTCTGACTATGGCATAGCCAAATCCAGTAAAAGAAGTTGAAGAGATATTTTTCAATGGTTTCGTGGCATGAGGGAAGGGAGAAGGAAAAGAAGGAAACAGAGGAACAACCCCCTCCTCAATTGATGAACTTTAACCATTAATGAACAATACAAGAAATTACGAAGATGCTTCTAGTTTGGGATCCTATTCATCCAGAGGAAGTAAGAAGGGTGTGGACTATGAAAGATATTCTTCCTAACTGGCTCAGTGAGCTGTGTTTGAGTTATGCTTCTCCTATCGGCACTGAGAAACTCAAACAGTTCTACTTTTCCTCTTTGAAGCAAGACTGAAACAGTGTGGCTACGACAGGTTAATATTAGAATGATAGGCAACAGGTCGAGATAGTACTCAAGTATGAACAATAAAGAGTAACTCAACTGTGTCCAAGGCAATTTCATAACAATCGTAGGCATGTGCAGATTCCATCGATTTCTGTAGGATTCAGTTAGACCTCCAATTGTAGAAGAATTTGAAAGAAAGGGTAAAAGGGGAATGCCACCCGCAAGAGTTAGCTTGCTAGGCTGCGTGTGTACCTTATATAGTAAGGAGTAAGTAAGTTTTATCGTTCATGTCCTTGCTGTGAGTATCATAGTGATGGAGAGTTTTTCTCTCGAGCTAGGTAACTTAGAGGTTGTATTGTACTGCTAACTTACCTGTGAATATTTCAAGTTAATACAAAAAGATACCTATAAGTTGAGAGCATGTAGAAATGATGGAGCATGACACAAAGGAATTTGGAGGATCGGATGGAATTGATGGAAAGGGTAACCAGAGATATGATCTAGTTTCTAAAAGACGGTCTGTATTTCTTTGATGAATGTGGCATTGGGAAACTGAGAATAGTTTAATTGATGACTTTGTTTCAATCTCTTCAATTGACCATCATATAACTTGGAATCCTTGACCCTTCTTTCTTTTGAGCGAGTGTTATATCTTCAAGGTGTTGCATCAAATGACTTTGTTTCATCAGCTTGTGTTCCAAAGTGTTGCATCAGTCCTGTGATGACCAAATCTTTGTGTTTCAGTTATTATAGTGAAGATTGAGACGAAAGGAAACTGTCTGATAAATTGGAAGGTAAGATTGTGTCAAGTCATCATGTCCCTCAACAATTTGAGGTATACTTGGATCATGACATCGTTTTCTATGGAAGGATGTATTAGAAGAAGAAAGCTATTGTCTTGTTTCATCTTTCTCTATCTTGGTAGACCAAGGTATAAAGAAAGAGATTGGAAGTCTAAAAATGGAGGAAAAAAAGATTATTAGAGTTAAGTCGATCAAGAGAACCCTATTTAGGGAGTGCAATAGTGAACCTGGGATTAGGGTCCAAGGCTTGATTTGGAGTCACATGGTGTAATAAAAAAGTGATCTTATTCAGAAATCAATGTCTTACTCCATAGCTGTTCGGAAATAAAACAAGGTAACAATAGTCTAATAAAAGACATCTATCTGGTCAGAATTTTTGCAGAAGTTGTTTTCTCTTCCTGTGTATTGATATGCCTTGAATCTGTTATCTGGCACACCAAATAACCAAGCACGGGATGCAATATATAAACCCTGTTACTCTTATTTGTCCTATTCTCTGTATTTGTACTCTATTACTCCTCACGATAACAAACTATTCTCTCCCTCTGTCTGTGGTCGTAGCTTACACACCGTTAGTGAACCACGTAAATCTATGTATTGGTTCTTCTCACTTCTTTATTCTTTTACTTGTCGATTTGTTTTTTTGTCATAACAAGTTGGAGAACAACCAGGTTTTTGCTAATTAATATTAAAAAATCTTCATCACCATCGAATTTTAAAACACAAACATAATGCTAGTTTGAAGGAGTGAAATCTATACTGTGCTTCTCATTTCTCCAATTGATTAGACGTACACACTTTTCCTATTGTTATTGGACTGATGACGAACAATTCTTTTTTTGTTCTTTACCATTAGTATCTATCCGTTGGACATCCACCTTATTACAAGGGCTTGGATTACATTTATGAAGACCGTGGTGAGGTCAGTTTACACCGATTTCGTTCAAACCTGTTAAAATATATCAGAGACTGCTGATGAGTAATCTTTTGGTGTCAAACTTTCTTTCTTCAGGTATTGGATATTCGCATTTTTGAAACAGGAGAATATGCACTTGTGAGTAACTTTCATTTGGATTCCATGTATATGCTTGATGCTTTGGCTTTTCTTTTCATTTGCTATAAGATTTATTGGACGCCCACCATGTGACAAGTTCTTTCATTTCTACTATATATTTAATGGGGTCAATTTCAAGTTCTTCCTTTACTACTATTACTTATCAAAATAGTCAGAGAAAAAGGAAAATTAGCTCTAGTAAAATGAATGTTTCCCCTGGTTGCAAATGCATTAGTATGCTGCATTTTTACTCAAAATTCTTGGGCAGATTGCATGGGTTGGTATTCCAACTGCACCAGCTTGGCTGCCTACAGACATGCTTATAAAGGTATTTATTTAAAGCTTTTCTCGATATCTCGCACATCCTGTGGTCGTCAACTTGTAACTCAACAAGTTTACAATAAGCAAGATCATATATTTAAACATTAGAATCATGGATAGTTGGAGAAAACTTAGCAATATAGGTTAATTCTAACATAACAGTTACCTTTCATCAGTTCATCTCAACTAAGAAAACTAGTGATCGTTAAATGAATTTCCTAGAGTAGCATCAAGGATGCAGAAATAGCATTAACCTCCTTCTCAAAGCAGGCTATCAATGAAGATAGAGAAAGATAGCTATAGAAAGTAATTGAAAATTTTTACCATTCACCACTTTAGTCAGTTTTCTTCTTCTTTTAATGATTCGATGGGTTGTGAGAATGAGAAAACTTGGTGCTCTTAGAAGATTTTTTTTTTTTTTTTTAAAGAAACAAGAATTTCATTGATCAAATGAAATCACTAGGGGAAAAAAAGGCCTGTCCGAAGTTAAAAGAATTCCAATGGGCAAACAAAGTAGAAAGGCCATGATTAGGGAGGTTTCACCTATCCGAAGATCAATTCCATCTGACAACAAAGTTTTTCCTTTTCCTTTCTTCTTGCTTCTTTTTCGAGTTCGAGACAGCAAGGTTTTAAATTATTAAGGTCCCGTTTGATAACTATTTGGTTTTTTAGTTTTGGTTTTTGGTTTTTAAGCTTATAAACACCACTTCCAACTCTTAAGTTTCTTTGGCTTTTCACCTACCTTCTTTCCATGTTTTCAAAAACTTGTTTTTGTTTTTAGAATTTGGTTAGGAATTCAAGTGTGTCTTTAACAAAAATGAAAACCATGGTGAGGAAATTTAAAGAAAACAAGCCTAATTTTCAAAAACCAAAAACCAAAAACCAAATGGTTGGATTTGGTAGCTGTCTCTAAAACATCCCACCCTTGCCACCACTGGGTTACCTATTGTTTCTTTCTTTTTCTTGAGAAATGGGCAGGTCTCTATGCAGAATTACTACCACTGTTAACCATTTCTTGCATTTAGTTTTGATAACTTTTCTCTTTCTGGCAGTCGGAGAAACTCAACTACGAAAGACTCTAA

mRNA sequence

ATGGCTTTCTCTGCAACTCTTTTTAACAACTCTTTCTCATGCCTCAATCAGTTCCCCCAAAGTTTTAGAAGAAACCCACTTCGTTTTCGCCCCATTCGAGCCGTGAAATCCACTGAACCGGAGAACAAGGTATCGGAGACGAAAACCCAGGAGCCTCCCAATGCTGAACCTTCAACTTCAAGCTCCTCCGCCGCCGCCGCTCCCAAGGTTCCCAAGAAGCCCGTCTATTCGATGAAGAAGGGTCAGATTGTGAGAGTTGATAAAGAGAAGTATCTTAATAGCGTTAATTATCTATCCGTTGGACATCCACCTTATTACAAGGGCTTGGATTACATTTATGAAGACCGTGGTGAGGTATTGGATATTCGCATTTTTGAAACAGGAGAATATGCACTTATTGCATGGGTTGGTATTCCAACTGCACCAGCTTGGCTGCCTACAGACATGCTTATAAAGTCGGAGAAACTCAACTACGAAAGACTCTAA

Coding sequence (CDS)

ATGGCTTTCTCTGCAACTCTTTTTAACAACTCTTTCTCATGCCTCAATCAGTTCCCCCAAAGTTTTAGAAGAAACCCACTTCGTTTTCGCCCCATTCGAGCCGTGAAATCCACTGAACCGGAGAACAAGGTATCGGAGACGAAAACCCAGGAGCCTCCCAATGCTGAACCTTCAACTTCAAGCTCCTCCGCCGCCGCCGCTCCCAAGGTTCCCAAGAAGCCCGTCTATTCGATGAAGAAGGGTCAGATTGTGAGAGTTGATAAAGAGAAGTATCTTAATAGCGTTAATTATCTATCCGTTGGACATCCACCTTATTACAAGGGCTTGGATTACATTTATGAAGACCGTGGTGAGGTATTGGATATTCGCATTTTTGAAACAGGAGAATATGCACTTATTGCATGGGTTGGTATTCCAACTGCACCAGCTTGGCTGCCTACAGACATGCTTATAAAGTCGGAGAAACTCAACTACGAAAGACTCTAA

Protein sequence

MAFSATLFNNSFSCLNQFPQSFRRNPLRFRPIRAVKSTEPENKVSETKTQEPPNAEPSTSSSSAAAAPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLDIRIFETGEYALIAWVGIPTAPAWLPTDMLIKSEKLNYERL

Homology

[Close]

BLAST of Lcy04g012970 vs. ExPASy Swiss-Prot
Match: Q9S829 (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhO PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 6.6e-47
Identity = 107/164 (65.24%), Postives = 124/164 (75.61%), Query Frame = 0


Query: 1   MAFSATLFN-NSFSCL-NQFPQSFRRNPLRFRPIRAVKSTEPENKVSETKTQEPPNAEPS 60
           MAFSAT+   +S S + +  P S RR P R  P   VK+   + K S   TQ   + E  
Sbjct: 1   MAFSATVSQLSSLSTISSSLPISSRRLPHRSLPQFTVKAEAEKEKQS---TQGKSDGE-- 60

Query: 61  TSSSSAAAAPK-VPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRG 120
            +S +A   PK +PKKPVYSMKKGQIVRV+KEKYLNS+NYLSVGHPP+YKGLDYIYEDRG
Sbjct: 61  -ASPAATKTPKTLPKKPVYSMKKGQIVRVEKEKYLNSINYLSVGHPPFYKGLDYIYEDRG 120

Query: 121 EVLDIRIFETGEYALIAWVGIPTAPAWLPTDMLIKSEKLNYERL 162
           EVLD+R+FETGEYAL+ WVGIPTAPAWLPTDMLIK EKL YER+
Sbjct: 121 EVLDLRVFETGEYALVGWVGIPTAPAWLPTDMLIKCEKLVYERM 158

[Close]

BLAST of Lcy04g012970 vs. ExPASy Swiss-Prot
Match: Q7NFI1 (NAD(P)H-quinone oxidoreductase subunit O OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=ndhO PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 9.6e-06
Identity = 30/76 (39.47%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 78  MKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLDIRIFETGEYALIAWVG 137
           +KKG +VR  ++K  NS+  L+       +   Y++E  GEVLD+R    G+YALI +  
Sbjct: 3   IKKGSLVRAVRDKLDNSLEALAND----TRWPSYLFETDGEVLDMR----GDYALIKFGA 62

Query: 138 IPTAPAWLPTDMLIKS 154
           +PT P WL  D L +S
Sbjct: 63  VPTPPVWLRQDQLAES 70

[Close]

BLAST of Lcy04g012970 vs. ExPASy Swiss-Prot
Match: Q8DMU4 (NAD(P)H-quinone oxidoreductase subunit O OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=ndhO PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.8e-05
Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 77  SMKKGQIVRVDKEKYLNSVNYLSVGH--PPYYKGLDYIYEDRGEVLDIRIFETGEYALIA 136
           ++KKG +V+V  EK  NS+  L+  H  PP      Y++E RGEV+DIR    G+YA I 
Sbjct: 2   AIKKGDLVKVVAEKLANSLEALASDHRYPP------YLFEGRGEVVDIR----GDYAQIK 61

Query: 137 WVGIPTAPAWLPTDML 151
           +  +PT   WL  D L
Sbjct: 62  F-PVPTPTVWLRLDQL 66

[Close]

BLAST of Lcy04g012970 vs. ExPASy Swiss-Prot
Match: Q117D1 (NAD(P)H-quinone oxidoreductase subunit O OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=ndhO PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.8e-04
Identity = 29/77 (37.66%), Postives = 43/77 (55.84%), Query Frame = 0


Query: 78  MKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLDIRIFETGEYALIAWVG 137
           +KKG +VRV +EK  NS+   +  +    +   YI+E +GE++D R    G+YA I +  
Sbjct: 4   IKKGSLVRVVREKLENSLEAKASDN----RFPAYIFESQGEIVDTR----GDYAFIKFGK 63

Query: 138 IPTAPAWLPTDMLIKSE 155
           +PT   WL  D L K E
Sbjct: 64  VPTPNIWLRLDQLEKFE 72

[Close]

BLAST of Lcy04g012970 vs. ExPASy Swiss-Prot
Match: A3PAI6 (NAD(P)H-quinone oxidoreductase subunit O OS=Prochlorococcus marinus (strain MIT 9301) OX=167546 GN=ndhO PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.4e-04
Identity = 29/81 (35.80%), Postives = 42/81 (51.85%), Query Frame = 0


Query: 70  VPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVLDIRIFETGE 129
           +PKKP   +KKG +V VDKE Y+ S+  L+  H       +Y++E  GE+L ++     E
Sbjct: 5   IPKKP---LKKGSLVFVDKENYIKSIEALASDHDL----PNYVFEGPGEILSVK----DE 64

Query: 130 YALIAWVGIPTAPAWLPTDML 151
           YA I W   P    W   + L
Sbjct: 65  YAQIRW-RRPVPDVWFKLEQL 73

[Close]

BLAST of Lcy04g012970 vs. ExPASy TrEMBL
Match: A0A6J1GED5 (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453390 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.0e-74
Identity = 146/161 (90.68%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MAFSATLFNNSFSCLNQFPQSFRRNPLRFRPIRAVKSTEPENKVSETKTQEPPNAEPSTS 60
           MAFSA+L +NSFSCL+QFPQSFRRNPLRF PIRA+KST+PENK SETKTQ+PP AEPST 
Sbjct: 33  MAFSASLSHNSFSCLSQFPQSFRRNPLRFNPIRALKSTDPENKASETKTQQPPMAEPST- 92

Query: 61  SSSAAAAPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL 120
           SSS AA+PKV KKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL
Sbjct: 93  SSSPAASPKVLKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL 152

Query: 121 DIRIFETGEYALIAWVGIPTAPAWLPTDMLIKSEKLNYERL 162
           DIRIFETGEYALIAWVG+PTAPAWLPTDMLIKSEKLNYERL
Sbjct: 153 DIRIFETGEYALIAWVGVPTAPAWLPTDMLIKSEKLNYERL 192

[Close]

BLAST of Lcy04g012970 vs. ExPASy TrEMBL
Match: A0A6J1ILG8 (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478100 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.3e-74
Identity = 146/161 (90.68%), Postives = 153/161 (95.03%), Query Frame = 0


Query: 1   MAFSATLFNNSFSCLNQFPQSFRRNPLRFRPIRAVKSTEPENKVSETKTQEPPNAEPSTS 60
           MAFSA+L +NSFSCL QFPQSFRRNPLRF PIRA+KST+PENK SETKTQ+PP AEPST 
Sbjct: 1   MAFSASLSHNSFSCLTQFPQSFRRNPLRFNPIRALKSTDPENKASETKTQQPPMAEPST- 60

Query: 61  SSSAAAAPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL 120
           SSS AA+PKV KKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL
Sbjct: 61  SSSPAASPKVLKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL 120

Query: 121 DIRIFETGEYALIAWVGIPTAPAWLPTDMLIKSEKLNYERL 162
           DIRIFETGEYALIAWVG+PTAPAWLPTDMLIKSEKLNYERL
Sbjct: 121 DIRIFETGEYALIAWVGVPTAPAWLPTDMLIKSEKLNYERL 160

[Close]

BLAST of Lcy04g012970 vs. ExPASy TrEMBL
Match: A0A1S3B2K7 (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485281 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.3e-71
Identity = 142/161 (88.20%), Postives = 149/161 (92.55%), Query Frame = 0


Query: 1   MAFSATLFNNSFSCLNQFPQSFRRNPLRFRPIRAVKSTEPENKVSETKTQEPPNAEPSTS 60
           M FSA+L +NSFSCL QFPQ+FRRNPLR   IRAVKSTEPE KV ETKTQEPP AEPS S
Sbjct: 1   MVFSASLSHNSFSCLTQFPQNFRRNPLRVHLIRAVKSTEPEKKVPETKTQEPPVAEPS-S 60

Query: 61  SSSAAAAPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL 120
           SSS  A+PKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPY+KGLDYIYEDRGEVL
Sbjct: 61  SSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYFKGLDYIYEDRGEVL 120

Query: 121 DIRIFETGEYALIAWVGIPTAPAWLPTDMLIKSEKLNYERL 162
           D+RIFETGEYALIAWVGIPTAPAWLPT+MLIKSEKLNYERL
Sbjct: 121 DLRIFETGEYALIAWVGIPTAPAWLPTEMLIKSEKLNYERL 160

[Close]

BLAST of Lcy04g012970 vs. ExPASy TrEMBL
Match: A0A0A0KHQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483310 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.4e-70
Identity = 141/161 (87.58%), Postives = 148/161 (91.93%), Query Frame = 0


Query: 1   MAFSATLFNNSFSCLNQFPQSFRRNPLRFRPIRAVKSTEPENKVSETKTQEPPNAEPSTS 60
           M FSA+  +NSFSCL QFPQ+FRRNPLRF  IRAVKSTEPE KVSETKTQE P AEPS S
Sbjct: 1   MVFSASFSHNSFSCLTQFPQNFRRNPLRFHLIRAVKSTEPEKKVSETKTQELPVAEPS-S 60

Query: 61  SSSAAAAPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL 120
           SSS  A+PKV KKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPY+KGLDYIYEDRGEVL
Sbjct: 61  SSSPTASPKVSKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYFKGLDYIYEDRGEVL 120

Query: 121 DIRIFETGEYALIAWVGIPTAPAWLPTDMLIKSEKLNYERL 162
           D+RIFETGEYALIAWVGIPTAPAWLPT+MLIKSEKLNYERL
Sbjct: 121 DLRIFETGEYALIAWVGIPTAPAWLPTEMLIKSEKLNYERL 160

[Close]

BLAST of Lcy04g012970 vs. ExPASy TrEMBL
Match: A0A6J1BWP0 (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005416 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.8e-68
Identity = 136/161 (84.47%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 1   MAFSATLFNNSFSCLNQFPQSFRRNPLRFRPIRAVKSTEPENKVSETKTQEPPNAEPSTS 60
           MAFSA+L ++SFSCL  F Q+FRRNPL F PIRAVKSTEPE K SE KTQEP      +S
Sbjct: 1   MAFSASLSHSSFSCLTHFSQNFRRNPLHFHPIRAVKSTEPEQKASEAKTQEP------SS 60

Query: 61  SSSAAAAPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL 120
           SSS AA+PK PKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPY+KGLDYIYEDRGEVL
Sbjct: 61  SSSTAASPKPPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYFKGLDYIYEDRGEVL 120

Query: 121 DIRIFETGEYALIAWVGIPTAPAWLPTDMLIKSEKLNYERL 162
           DIRIFETGEYALIAWVG+PTAPAWLPTDMLIKSEKLNYERL
Sbjct: 121 DIRIFETGEYALIAWVGVPTAPAWLPTDMLIKSEKLNYERL 155

[Close]

BLAST of Lcy04g012970 vs. NCBI nr
Match: XP_022950243.1 (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Cucurbita moschata])

HSP 1 Score: 289.3 bits (739), Expect = 2.1e-74
Identity = 146/161 (90.68%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MAFSATLFNNSFSCLNQFPQSFRRNPLRFRPIRAVKSTEPENKVSETKTQEPPNAEPSTS 60
           MAFSA+L +NSFSCL+QFPQSFRRNPLRF PIRA+KST+PENK SETKTQ+PP AEPST 
Sbjct: 33  MAFSASLSHNSFSCLSQFPQSFRRNPLRFNPIRALKSTDPENKASETKTQQPPMAEPST- 92

Query: 61  SSSAAAAPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL 120
           SSS AA+PKV KKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL
Sbjct: 93  SSSPAASPKVLKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL 152

Query: 121 DIRIFETGEYALIAWVGIPTAPAWLPTDMLIKSEKLNYERL 162
           DIRIFETGEYALIAWVG+PTAPAWLPTDMLIKSEKLNYERL
Sbjct: 153 DIRIFETGEYALIAWVGVPTAPAWLPTDMLIKSEKLNYERL 192

[Close]

BLAST of Lcy04g012970 vs. NCBI nr
Match: XP_022977966.1 (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 288.9 bits (738), Expect = 2.7e-74
Identity = 146/161 (90.68%), Postives = 153/161 (95.03%), Query Frame = 0


Query: 1   MAFSATLFNNSFSCLNQFPQSFRRNPLRFRPIRAVKSTEPENKVSETKTQEPPNAEPSTS 60
           MAFSA+L +NSFSCL QFPQSFRRNPLRF PIRA+KST+PENK SETKTQ+PP AEPST 
Sbjct: 1   MAFSASLSHNSFSCLTQFPQSFRRNPLRFNPIRALKSTDPENKASETKTQQPPMAEPST- 60

Query: 61  SSSAAAAPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL 120
           SSS AA+PKV KKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL
Sbjct: 61  SSSPAASPKVLKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRGEVL 120

Query: 121 DIRIFETGEYALIAWVGIPTAPAWLPTDMLIKSEKLNYERL 162
           DIRIFETGEYALIAWVG+PTAPAWLPTDMLIKSEKLNYERL
Sbjct: 121 DIRIFETGEYALIAWVGVPTAPAWLPTDMLIKSEKLNYERL 160

[Close]

BLAST of Lcy04g012970 vs. NCBI nr
Match: XP_023544121.1 (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.0 bits (720), Expect = 3.3e-72
Identity = 146/168 (86.90%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MAFSATLFNNSFSCLNQFPQSF-------RRNPLRFRPIRAVKSTEPENKVSETKTQEPP 60
           MAFSA+L +NSFSCL QFPQSF       RRNPLRF PIRA+KST+PENK SETKTQ+PP
Sbjct: 1   MAFSASLSHNSFSCLTQFPQSFRRNPQSSRRNPLRFNPIRALKSTDPENKASETKTQQPP 60

Query: 61  NAEPSTSSSSAAAAPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIY 120
            AEPST SSS AA+PKV KKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIY
Sbjct: 61  MAEPST-SSSPAASPKVLKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIY 120

Query: 121 EDRGEVLDIRIFETGEYALIAWVGIPTAPAWLPTDMLIKSEKLNYERL 162
           EDRGEVLDIRIFETGEYALIAWVG+PTAPAWLPTDMLIKSEKLNYERL
Sbjct: 121 EDRGEVLDIRIFETGEYALIAWVGVPTAPAWLPTDMLIKSEKLNYERL 167

[Close]

BLAST of Lcy04g012970 vs. NCBI nr
Match: KAG7034448.1 (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 282.0 bits (720), Expect = 3.3e-72
Identity = 146/168 (86.90%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MAFSATLFNNSFSCLNQF-------PQSFRRNPLRFRPIRAVKSTEPENKVSETKTQEPP 60
           MAFSA+L +NSFSCL QF       PQSFRRNPLRF PIRA+KST+PENK SETKTQ+PP
Sbjct: 33  MAFSASLSHNSFSCLTQFPQSFRRNPQSFRRNPLRFNPIRALKSTDPENKASETKTQQPP 92

Query: 61  NAEPSTSSSSAAAAPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIY 120
            AEPST SSS AA+PKV KKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIY
Sbjct: 93  MAEPST-SSSPAASPKVLKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIY 152

Query: 121 EDRGEVLDIRIFETGEYALIAWVGIPTAPAWLPTDMLIKSEKLNYERL 162
           EDRGEVLDIRIFETGEYALIAWVG+PTAPAWLPTDMLIKSEKLNYERL
Sbjct: 153 EDRGEVLDIRIFETGEYALIAWVGVPTAPAWLPTDMLIKSEKLNYERL 199

[Close]

BLAST of Lcy04g012970 vs. NCBI nr
Match: KAG6604287.1 (NAD(P)H-quinone oxidoreductase subunit O, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 282.0 bits (720), Expect = 3.3e-72
Identity = 146/168 (86.90%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MAFSATLFNNSFSCLNQF-------PQSFRRNPLRFRPIRAVKSTEPENKVSETKTQEPP 60
           MAFSA+L +NSFSCL QF       PQSFRRNPLRF PIRA+KST+PENK SETKTQ+PP
Sbjct: 1   MAFSASLSHNSFSCLTQFPQSFRRNPQSFRRNPLRFNPIRALKSTDPENKASETKTQQPP 60

Query: 61  NAEPSTSSSSAAAAPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIY 120
            AEPST SSS AA+PKV KKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIY
Sbjct: 61  MAEPST-SSSPAASPKVLKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIY 120

Query: 121 EDRGEVLDIRIFETGEYALIAWVGIPTAPAWLPTDMLIKSEKLNYERL 162
           EDRGEVLDIRIFETGEYALIAWVG+PTAPAWLPTDMLIKSEKLNYERL
Sbjct: 121 EDRGEVLDIRIFETGEYALIAWVGVPTAPAWLPTDMLIKSEKLNYERL 167

[Close]

BLAST of Lcy04g012970 vs. TAIR 10
Match: AT1G74880.1 (NAD(P)H:plastoquinone dehydrogenase complex subunit O )

HSP 1 Score: 188.3 bits (477), Expect = 4.7e-48
Identity = 107/164 (65.24%), Postives = 124/164 (75.61%), Query Frame = 0


Query: 1   MAFSATLFN-NSFSCL-NQFPQSFRRNPLRFRPIRAVKSTEPENKVSETKTQEPPNAEPS 60
           MAFSAT+   +S S + +  P S RR P R  P   VK+   + K S   TQ   + E  
Sbjct: 1   MAFSATVSQLSSLSTISSSLPISSRRLPHRSLPQFTVKAEAEKEKQS---TQGKSDGE-- 60

Query: 61  TSSSSAAAAPK-VPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDYIYEDRG 120
            +S +A   PK +PKKPVYSMKKGQIVRV+KEKYLNS+NYLSVGHPP+YKGLDYIYEDRG
Sbjct: 61  -ASPAATKTPKTLPKKPVYSMKKGQIVRVEKEKYLNSINYLSVGHPPFYKGLDYIYEDRG 120

Query: 121 EVLDIRIFETGEYALIAWVGIPTAPAWLPTDMLIKSEKLNYERL 162
           EVLD+R+FETGEYAL+ WVGIPTAPAWLPTDMLIK EKL YER+
Sbjct: 121 EVLDLRVFETGEYALVGWVGIPTAPAWLPTDMLIKCEKLVYERM 158

The following BLAST results are available for this feature:

BLAST of Lcy04g012970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S829	6.6e-47	65.24	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q7NFI1	9.6e-06	39.47	NAD(P)H-quinone oxidoreductase subunit O OS=Gloeobacter violaceus (strain ATCC 2...	[more]
Q8DMU4	2.8e-05	42.11	NAD(P)H-quinone oxidoreductase subunit O OS=Thermosynechococcus elongatus (strai...	[more]
Q117D1	1.8e-04	37.66	NAD(P)H-quinone oxidoreductase subunit O OS=Trichodesmium erythraeum (strain IMS...	[more]
A3PAI6	2.4e-04	35.80	NAD(P)H-quinone oxidoreductase subunit O OS=Prochlorococcus marinus (strain MIT ...	[more]

BLAST of Lcy04g012970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GED5	1.0e-74	90.68	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic OS=Cucurbita moschata OX...	[more]
A0A6J1ILG8	1.3e-74	90.68	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic isoform X1 OS=Cucurbita ...	[more]
A0A1S3B2K7	2.3e-71	88.20	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A0A0KHQ6	3.4e-70	87.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483310 PE=4 SV=1	[more]
A0A6J1BWP0	1.8e-68	84.47	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic OS=Momordica charantia O...	[more]

BLAST of Lcy04g012970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022950243.1	2.1e-74	90.68	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Cucurbita moschata]	[more]
XP_022977966.1	2.7e-74	90.68	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic isoform X1 [Cucurbita ma...	[more]
XP_023544121.1	3.3e-72	86.90	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Cucurbita pepo subsp. p...	[more]
KAG7034448.1	3.3e-72	86.90	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Cucurbita argyrosperma ...	[more]
KAG6604287.1	3.3e-72	86.90	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic, partial [Cucurbita argy...	[more]

BLAST of Lcy04g012970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74880.1	4.7e-48	65.24	NAD(P)H:plastoquinone dehydrogenase complex subunit O	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020905	NAD(P)H-quinone oxidoreductase subunit O	PFAM	PF11910	NdhO	coord: 78..152 e-value: 9.4E-30 score: 102.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..75
None	No IPR available	PANTHER	PTHR36728	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT O, CHLOROPLASTIC	coord: 1..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g012970.1	Lcy04g012970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding