Lcy04g012750 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g012750
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Aspartic acid proteinase inhibitor
Location	Chr04: 44449614 .. 44450142 (-)
RNA-Seq Expression	Lcy04g012750
Synteny	Lcy04g012750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAATTTGTTGGAAGTATTGGTGAAATAGAAAGTTATGAGCTTCATACCCAACTTCGGGCCAGGGCCAGTAGTCGGTAGTTGGGAGCAGGTGGATAGACACGACCCAAAGGTTCGCGAGCTGGCAGAGTTTGCACTGACAGAGAATGCGAAGATCAGTGGCGAAACACTGGTGTTGAATGATGTGCTTAATGCTCTGAAGGTGGAGGTGTTCTTGGACTCGTTCAAGAACTATTACCTCTTTCTTCTCTCCGCCAGACCAAGCAATGGACCCTTTGGGAGATTTTATAGCGCCATTGTCTCGGTTGATATCAATAGTCCATCAGAAAAGTCGCTCGTTTCTTTTCTTCAACTCTAGTAACTTTGACGACTTTAAAGGGAACGTAACCTATCTTATCTTATATGATAATCATGTGAAAAACTAGCTACTTGATTACGTGAGAATAATAAGACTAAAAACTATGTATTTTATGTATGTCCATCGCGTGTTTTTTCTCTTCTTTTTCTCTTGAATGATTATTAAATTAAAG

mRNA sequence

GAAAATTTGTTGGAAGTATTGGTGAAATAGAAAGTTATGAGCTTCATACCCAACTTCGGGCCAGGGCCAGTAGTCGGTAGTTGGGAGCAGGTGGATAGACACGACCCAAAGGTTCGCGAGCTGGCAGAGTTTGCACTGACAGAGAATGCGAAGATCAGTGGCGAAACACTGGTGTTGAATGATGTGCTTAATGCTCTGAAGGTGGAGGTGTTCTTGGACTCGTTCAAGAACTATTACCTCTTTCTTCTCTCCGCCAGACCAAGCAATGGACCCTTTGGGAGATTTTATAGCGCCATTGTCTCGGTTGATATCAATAGTCCATCAGAAAAGTCGCTCGTTTCTTTTCTTCAACTCTAGTAACTTTGACGACTTTAAAGGGAACGTAACCTATCTTATCTTATATGATAATCATGTGAAAAACTAGCTACTTGATTACGTGAGAATAATAAGACTAAAAACTATGTATTTTATGTATGTCCATCGCGTGTTTTTTCTCTTCTTTTTCTCTTGAATGATTATTAAATTAAAG

Coding sequence (CDS)

ATGAGCTTCATACCCAACTTCGGGCCAGGGCCAGTAGTCGGTAGTTGGGAGCAGGTGGATAGACACGACCCAAAGGTTCGCGAGCTGGCAGAGTTTGCACTGACAGAGAATGCGAAGATCAGTGGCGAAACACTGGTGTTGAATGATGTGCTTAATGCTCTGAAGGTGGAGGTGTTCTTGGACTCGTTCAAGAACTATTACCTCTTTCTTCTCTCCGCCAGACCAAGCAATGGACCCTTTGGGAGATTTTATAGCGCCATTGTCTCGGTTGATATCAATAGTCCATCAGAAAAGTCGCTCGTTTCTTTTCTTCAACTCTAG

Protein sequence

MSFIPNFGPGPVVGSWEQVDRHDPKVRELAEFALTENAKISGETLVLNDVLNALKVEVFLDSFKNYYLFLLSARPSNGPFGRFYSAIVSVDINSPSEKSLVSFLQL

Homology

[Close]

BLAST of Lcy04g012750 vs. ExPASy TrEMBL
Match: Q2V8I8 (Aspartic acid proteinase inhibitor (Fragment) OS=Cucurbita maxima OX=3661 GN=API PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.9e-06
Identity = 36/102 (35.29%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 5   PNFGPGPVVGSWEQVDRHDPKVRELAEFALTENAKISGETLVLNDVLNALKVEVFLDSFK 64
           P+ GPGP +G    +  +DP+V+E+AEFAL ++A+   + L+L  V +A ++   +  + 
Sbjct: 5   PHMGPGPAIGEVIGISVNDPRVKEIAEFALKQHAE---QNLILAGV-DAGQIIKGIPHWD 64

Query: 65  NYYLFLLSARPSNGPFGRFYSAIVSVDINSPSEKSLVSFLQL 107
           NYY  +LSA+ S   F +FY+ +V ++  S +   L+SF+ L
Sbjct: 65  NYYNLILSAKHSPHEFSKFYNVVV-LEKASDNSLKLISFVPL 101

[Close]

BLAST of Lcy04g012750 vs. ExPASy TrEMBL
Match: Q6DLC8 (Aspartic protease inhibitor OS=Cucurbita maxima OX=3661 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.8e-06
Identity = 36/102 (35.29%), Postives = 62/102 (60.78%), Query Frame = 0


Query: 5   PNFGPGPVVGSWEQVDRHDPKVRELAEFALTENAKISGETLVLNDVLNALKVEVFLDSFK 64
           P  GPGP +G    +  +DP+V+E+AEFAL ++A+   + L+L  V +A ++   +  + 
Sbjct: 5   PPMGPGPAIGGVIGISVNDPRVKEIAEFALKQHAE---QNLILAGV-DAGQIIKGIPDWN 64

Query: 65  NYYLFLLSARPSNGPFGRFYSAIVSVDINSPSEKSLVSFLQL 107
           NYY  +LSA+ S   F +FY+ +V ++  S +   L+SF+ L
Sbjct: 65  NYYNLILSAKHSPHEFSKFYNVVV-LEKASDNSLKLISFVPL 101

[Close]

BLAST of Lcy04g012750 vs. ExPASy TrEMBL
Match: Q6DLC9 (Aspartic protease inhibitor OS=Cucurbita maxima OX=3661 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.0e-06
Identity = 36/102 (35.29%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 5   PNFGPGPVVGSWEQVDRHDPKVRELAEFALTENAKISGETLVLNDVLNALKVEVFLDSFK 64
           P+ GPGP +G    +  +DP+V+E+AEFAL ++A+   + L+L  V +A ++   +  + 
Sbjct: 5   PHMGPGPAIGEVIGISVNDPRVKEIAEFALKQHAE---QNLILAGV-DAGQIIKGIPHWD 64

Query: 65  NYYLFLLSARPSNGPFGRFYSAIVSVDINSPSEKSLVSFLQL 107
           NYY  +LSA+ S   F +FY+ +V ++  S +   LV+F+ L
Sbjct: 65  NYYNLILSAKHSPHEFSKFYNVVV-LEKASDNSLKLVAFVPL 101

[Close]

BLAST of Lcy04g012750 vs. ExPASy TrEMBL
Match: Q6DKU9 (Aspartic protease inhibitor OS=Cucurbita maxima OX=3661 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.5e-05
Identity = 37/104 (35.58%), Postives = 62/104 (59.62%), Query Frame = 0


Query: 5   PNFGPGPVVGSWEQVDRHDPKVRELAEFALTENAKISGETLVLNDVLNALKVEVFLDSFK 64
           P  GPGP +G    +  +DP+V+E+AEFAL ++A+   + L+L  V +A ++   +  + 
Sbjct: 5   PPMGPGPAIGGVIGISVNDPRVKEIAEFALKQHAE---QNLILAGV-DAGQIIKGIPDWN 64

Query: 65  NYYLFLLSARPSNGPFGRFYSAIVSVDINSPSEKSL--VSFLQL 107
           NYY  +LSA+ S   F +FY+ +V   +   S+ SL  +SF+ L
Sbjct: 65  NYYNLILSAKHSPHEFSKFYNVVV---LEKASDNSLKPISFVPL 101

[Close]

BLAST of Lcy04g012750 vs. ExPASy TrEMBL
Match: Q2V8I7 (Aspartic acid proteinase inhibitor (Fragment) OS=Cucurbita maxima OX=3661 GN=API PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.3e-05
Identity = 31/84 (36.90%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 5  PNFGPGPVVGSWEQVDRHDPKVRELAEFALTENAKISGETLVLNDVLNALKVEVFLDSFK 64
          P+ GPGP +G    +  +DP+V+E+AEFAL ++A+   + L+L  V +A ++   +  + 
Sbjct: 5  PHMGPGPPIGEVIGISVNDPRVKEIAEFALKQHAE---QNLILGGV-DAGQIIKGIPHWD 64

Query: 65 NYYLFLLSARPSNGPFGRFYSAIV 89
          NYY  +LSA+ S   F +FY+ +V
Sbjct: 65 NYYNLILSAKHSPHEFSKFYNVVV 84

[Close]

BLAST of Lcy04g012750 vs. NCBI nr
Match: XP_023528043.1 (uncharacterized protein LOC111791078 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 66.6 bits (161), Expect = 1.4e-07
Identity = 37/102 (36.27%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 5   PNFGPGPVVGSWEQVDRHDPKVRELAEFALTENAKISGETLVLNDVLNALKVEVFLDSFK 64
           P+ GPGPV+G    +  +DP+V+E+AEFAL ++A+   + L+L  V +A ++ + +  + 
Sbjct: 5   PHMGPGPVIGEVIGIQVNDPRVKEIAEFALKQHAE---QNLILAGV-DAGQIVMGIPKWN 64

Query: 65  NYYLFLLSARPSNGPFGRFYSAIVSVDINSPSEKSLVSFLQL 107
           NYY  ++SA+ S+  F +FY+ +V ++  S +   LVSF+ L
Sbjct: 65  NYYNLIISAKHSSHEFSKFYNVVV-LETASDNSLKLVSFVPL 101

[Close]

BLAST of Lcy04g012750 vs. NCBI nr
Match: KAE8645938.1 (hypothetical protein Csa_021378 [Cucumis sativus])

HSP 1 Score: 61.2 bits (147), Expect = 6.1e-06
Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 0


Query: 9   PGPVVGSWEQVDRHDPKVRELAEFALTENAKISGETLVLNDVLNALKVEVFLDSFKNYYL 68
           P  V+G+W  +   DPKV E+AE+A+ E     GE L+LN V     VEVFL     Y L
Sbjct: 9   PSIVIGTWNAIPNDDPKVIEMAEYAVKE----QGEELILNSVQAGQIVEVFLSGDTYYNL 68

Query: 69  FLLSARPSNGPFGRFYSAIVSVDINSPSEKSLVSFLQL 107
            +L+  P    F  FYS IV ++  S + K +VSF+ L
Sbjct: 69  LILAHHPHT--FQGFYSTIV-MENTSKNVKQVVSFVPL 99

[Close]

BLAST of Lcy04g012750 vs. NCBI nr
Match: ABB96307.1 (aspartic acid proteinase inhibitor, partial [Cucurbita maxima])

HSP 1 Score: 61.2 bits (147), Expect = 6.1e-06
Identity = 36/102 (35.29%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 5   PNFGPGPVVGSWEQVDRHDPKVRELAEFALTENAKISGETLVLNDVLNALKVEVFLDSFK 64
           P+ GPGP +G    +  +DP+V+E+AEFAL ++A+   + L+L  V +A ++   +  + 
Sbjct: 5   PHMGPGPAIGEVIGISVNDPRVKEIAEFALKQHAE---QNLILAGV-DAGQIIKGIPHWD 64

Query: 65  NYYLFLLSARPSNGPFGRFYSAIVSVDINSPSEKSLVSFLQL 107
           NYY  +LSA+ S   F +FY+ +V ++  S +   L+SF+ L
Sbjct: 65  NYYNLILSAKHSPHEFSKFYNVVV-LEKASDNSLKLISFVPL 101

[Close]

BLAST of Lcy04g012750 vs. NCBI nr
Match: AAT67163.1 (aspartic protease inhibitor [Cucurbita maxima])

HSP 1 Score: 60.8 bits (146), Expect = 7.9e-06
Identity = 36/102 (35.29%), Postives = 62/102 (60.78%), Query Frame = 0


Query: 5   PNFGPGPVVGSWEQVDRHDPKVRELAEFALTENAKISGETLVLNDVLNALKVEVFLDSFK 64
           P  GPGP +G    +  +DP+V+E+AEFAL ++A+   + L+L  V +A ++   +  + 
Sbjct: 5   PPMGPGPAIGGVIGISVNDPRVKEIAEFALKQHAE---QNLILAGV-DAGQIIKGIPDWN 64

Query: 65  NYYLFLLSARPSNGPFGRFYSAIVSVDINSPSEKSLVSFLQL 107
           NYY  +LSA+ S   F +FY+ +V ++  S +   L+SF+ L
Sbjct: 65  NYYNLILSAKHSPHEFSKFYNVVV-LEKASDNSLKLISFVPL 101

[Close]

BLAST of Lcy04g012750 vs. NCBI nr
Match: AAT67162.1 (aspartic protease inhibitor [Cucurbita maxima])

HSP 1 Score: 60.5 bits (145), Expect = 1.0e-05
Identity = 36/102 (35.29%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 5   PNFGPGPVVGSWEQVDRHDPKVRELAEFALTENAKISGETLVLNDVLNALKVEVFLDSFK 64
           P+ GPGP +G    +  +DP+V+E+AEFAL ++A+   + L+L  V +A ++   +  + 
Sbjct: 5   PHMGPGPAIGEVIGISVNDPRVKEIAEFALKQHAE---QNLILAGV-DAGQIIKGIPHWD 64

Query: 65  NYYLFLLSARPSNGPFGRFYSAIVSVDINSPSEKSLVSFLQL 107
           NYY  +LSA+ S   F +FY+ +V ++  S +   LV+F+ L
Sbjct: 65  NYYNLILSAKHSPHEFSKFYNVVV-LEKASDNSLKLVAFVPL 101

The following BLAST results are available for this feature:

BLAST of Lcy04g012750 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy04g012750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q2V8I8	2.9e-06	35.29	Aspartic acid proteinase inhibitor (Fragment) OS=Cucurbita maxima OX=3661 GN=API...	[more]
Q6DLC8	3.8e-06	35.29	Aspartic protease inhibitor OS=Cucurbita maxima OX=3661 PE=4 SV=1	[more]
Q6DLC9	5.0e-06	35.29	Aspartic protease inhibitor OS=Cucurbita maxima OX=3661 PE=1 SV=1	[more]
Q6DKU9	1.5e-05	35.58	Aspartic protease inhibitor OS=Cucurbita maxima OX=3661 PE=4 SV=1	[more]
Q2V8I7	3.3e-05	36.90	Aspartic acid proteinase inhibitor (Fragment) OS=Cucurbita maxima OX=3661 GN=API...	[more]

BLAST of Lcy04g012750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528043.1	1.4e-07	36.27	uncharacterized protein LOC111791078 [Cucurbita pepo subsp. pepo]	[more]
KAE8645938.1	6.1e-06	40.82	hypothetical protein Csa_021378 [Cucumis sativus]	[more]
ABB96307.1	6.1e-06	35.29	aspartic acid proteinase inhibitor, partial [Cucurbita maxima]	[more]
AAT67163.1	7.9e-06	35.29	aspartic protease inhibitor [Cucurbita maxima]	[more]
AAT67162.1	1.0e-05	35.29	aspartic protease inhibitor [Cucurbita maxima]	[more]

BLAST of Lcy04g012750 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.10		coord: 8..106 e-value: 2.7E-13 score: 51.9
None	No IPR available	SUPERFAMILY	54403	Cystatin/monellin	coord: 14..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g012750.1	Lcy04g012750.1	mRNA