Lcy04g012150 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g012150
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Alpha-amylase
Location	Chr04: 43913363 .. 43914724 (-)
RNA-Seq Expression	Lcy04g012150
Synteny	Lcy04g012150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCCATTTCTTATTCAACAAAGCAACTCATTCGTCACACAAGTGTCAATTCTCGGCCATGCCTTTTGTCTACAATGGCGTCTCATCCGTCACTGGTTTCCGTCGGTTGGAACACTCGGCGTCGGCAAATCTCCAAGCTCTCCGGTGGTTCAGGTCCATGCCCTAGGAATCCGAAGCTGGCGCCCAAGTCATCGGATGAGAACACAGATATCTTGCCCTCAGAAGATGACCCTGAAGATGGAGTCTCGCTTGGGACCATGAAATTGCCTTTGGACATTGACATTGCGAGATTTGAGGTCTTGCTCTTCCAGGTAGGTCGAAATTTCCTCCCCTTTCCAGCTCGTTTTTGCTTTACTACTTATATTACCGATGAAGAATAGAATAGGTAATTCAAGAGTGTTGGTTTTTTTTTTTTCTTTTTTTTCTTTTTGGATTGCAACAGTGGGCCAATAGTCTTTGCCAGGGTGCTAACCTGCCGCTTCCAGTGCCTATGAAGGTGAGTAATGGGTTTAAATTCTGAAGGTTCCTGATTATGATTCTTGAATGATAAAATATTCTTAGAAGTTCTCTAAAGAAGCTAGACGCCATCATGGTCGATCATAGTTAATGGTGCCGGCCGATTTGGGACGAAGACAATTCTATCGCCAACGAAAAGCCAAGAGGTTCTTTGGTAATCCCAAAACAAAATTAGGAGCAAGAATTGAAAAATCCTAATTGGACATTCTAGGACCGGGTGTTTAGAATAAACTTCAATAATTAGTTGAAAAGTTGCTCTCAAAGAAGCAGTTCAAAAGCTGATTTATTTTCTGTTTTCTTCTTTTGGTTCTATATGTATTTCTATCATTATGTGGCATCCCATTAACTCCCCTGTGAATGGGCTTACACAGTTGCACTTGAGATTAGCATTGCCTAGCATGATGAGATAAATGCGTGTACACTTTAAAATTTGGACAGTCAAGTCTAACGACTATGACAAACCATTTGTTTATTTTGGTGGTGCATGTCCTTTGCTAGTCATACACATAAGGAATTATCCGTGTCACATGAGGTTTGAGTATCGTACATCATTAGTTGATTACCTTTCTCAGCAAAAGCTTTAGGGGAAACTTATTTTGATTACAATCAAACAGGTCGACAAAATACCCGGTGGAGTTCGACTTGGTTTTATCACAATTGGAGATGGAAAGACAGATGTTCTCGTGTATATAGATTGCTTGGTGTTTCCTGCTACTGCCAGCACTGGTCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCTGGCGAACCGAGAATTATGAGGAGTCTTTTGAGTGCTTTGAAAAAATCAGTTGAAATTTCTTAA

mRNA sequence

ATGGACGCCATTTCTTATTCAACAAAGCAACTCATTCGTCACACAAGTGTCAATTCTCGGCCATGCCTTTTGTCTACAATGGCGTCTCATCCGTCACTGGTTTCCGTCGGTTGGAACACTCGGCGTCGGCAAATCTCCAAGCTCTCCGGTGGTTCAGGTCCATGCCCTAGGAATCCGAAGCTGGCGCCCAAGTCATCGGATGAGAACACAGATATCTTGCCCTCAGAAGATGACCCTGAAGATGGAGTCTCGCTTGGGACCATGAAATTGCCTTTGGACATTGACATTGCGAGATTTGAGGTCTTGCTCTTCCAGTGGGCCAATAGTCTTTGCCAGGGTGCTAACCTGCCGCTTCCAGTGCCTATGAAGGTCGACAAAATACCCGGTGGAGTTCGACTTGGTTTTATCACAATTGGAGATGGAAAGACAGATGTTCTCGTGTATATAGATTGCTTGGTGTTTCCTGCTACTGCCAGCACTGGTCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCTGGCGAACCGAGAATTATGAGGAGTCTTTTGAGTGCTTTGAAAAAATCAGTTGAAATTTCTTAA

Coding sequence (CDS)

ATGGACGCCATTTCTTATTCAACAAAGCAACTCATTCGTCACACAAGTGTCAATTCTCGGCCATGCCTTTTGTCTACAATGGCGTCTCATCCGTCACTGGTTTCCGTCGGTTGGAACACTCGGCGTCGGCAAATCTCCAAGCTCTCCGGTGGTTCAGGTCCATGCCCTAGGAATCCGAAGCTGGCGCCCAAGTCATCGGATGAGAACACAGATATCTTGCCCTCAGAAGATGACCCTGAAGATGGAGTCTCGCTTGGGACCATGAAATTGCCTTTGGACATTGACATTGCGAGATTTGAGGTCTTGCTCTTCCAGTGGGCCAATAGTCTTTGCCAGGGTGCTAACCTGCCGCTTCCAGTGCCTATGAAGGTCGACAAAATACCCGGTGGAGTTCGACTTGGTTTTATCACAATTGGAGATGGAAAGACAGATGTTCTCGTGTATATAGATTGCTTGGTGTTTCCTGCTACTGCCAGCACTGGTCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCTGGCGAACCGAGAATTATGAGGAGTCTTTTGAGTGCTTTGAAAAAATCAGTTGAAATTTCTTAA

Protein sequence

MDAISYSTKQLIRHTSVNSRPCLLSTMASHPSLVSVGWNTRRRQISKLSGGSGPCPRNPKLAPKSSDENTDILPSEDDPEDGVSLGTMKLPLDIDIARFEVLLFQWANSLCQGANLPLPVPMKVDKIPGGVRLGFITIGDGKTDVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIS

Homology

[Close]

BLAST of Lcy04g012150 vs. ExPASy TrEMBL
Match: A0A6J1I6G0 (uncharacterized protein LOC111471157 OS=Cucurbita maxima OX=3661 GN=LOC111471157 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.3e-91
Identity = 171/198 (86.36%), Postives = 184/198 (92.93%), Query Frame = 0


Query: 1   MDAISYSTKQLIRHTSVNSRPCLLSTMASHPSLVSVGWNTRRRQISKLSGGSGPCPRNPK 60
           M AI++STK LIRHT+VNSRP +LSTMASHPSLV VGWNTRRRQ SKLSG S PCPRN  
Sbjct: 1   MAAITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGVSSPCPRNMS 60

Query: 61  LAPKSSDENTDILPSEDDPEDGVSLGTMKLPLDIDIARFEVLLFQWANSLCQGANLPLPV 120
           LAPKSS+ENTDI PSED+PEDGVSLGTMKLP DIDIA+FEVLLFQWANSLCQGANLPLPV
Sbjct: 61  LAPKSSEENTDIFPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120

Query: 121 PMKVDKIPGGVRLGFITIGDGKTDVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSPPGE 180
           P++VDKI  GVRLGFI+IGDGKT+VLVYIDCLVFPATAS+ PIFRAIRNGRLKDQSPPGE
Sbjct: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180

Query: 181 PRIMRSLLSALKKSVEIS 199
           PRIMRSLLSALKKSVEI+
Sbjct: 181 PRIMRSLLSALKKSVEIA 198

[Close]

BLAST of Lcy04g012150 vs. ExPASy TrEMBL
Match: A0A6J1HDQ9 (uncharacterized protein LOC111463229 OS=Cucurbita moschata OX=3662 GN=LOC111463229 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.2e-91
Identity = 171/198 (86.36%), Postives = 184/198 (92.93%), Query Frame = 0


Query: 1   MDAISYSTKQLIRHTSVNSRPCLLSTMASHPSLVSVGWNTRRRQISKLSGGSGPCPRNPK 60
           M  I++STK LIRHT+VNSRP +LSTMASHPSLV VGWNTRRRQ SKLSG S PCPRN  
Sbjct: 1   MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMN 60

Query: 61  LAPKSSDENTDILPSEDDPEDGVSLGTMKLPLDIDIARFEVLLFQWANSLCQGANLPLPV 120
           LAPKSS+ENTDILPSED+PEDGVSLGTMKLP DIDIA+FEVLLFQWANSLCQGANLPLPV
Sbjct: 61  LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120

Query: 121 PMKVDKIPGGVRLGFITIGDGKTDVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSPPGE 180
           P++VDKI  GVRLGFI+IGDGKT+VLVYIDCLVFPATAS+ PIFRAIRNGRLKDQSPPGE
Sbjct: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180

Query: 181 PRIMRSLLSALKKSVEIS 199
           PRIMRSLLSALKKSVEI+
Sbjct: 181 PRIMRSLLSALKKSVEIA 198

[Close]

BLAST of Lcy04g012150 vs. ExPASy TrEMBL
Match: A0A0A0KFD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452740 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.2e-86
Identity = 167/199 (83.92%), Postives = 176/199 (88.44%), Query Frame = 0


Query: 1   MDAISYSTKQLIRHTSVNSRPCLLSTMASH-PSLVSVGWNTRRRQISKLSGGSGPCPRNP 60
           MDAISYST Q IR+ +VNSRPC+ S+M SH PSLV    NTR RQIS  S  SGPC R P
Sbjct: 1   MDAISYSTNQFIRYPNVNSRPCVFSSMPSHNPSLVFFASNTRYRQISNFSQVSGPCHRIP 60

Query: 61  KLAPKSSDENTDILPSEDDPEDGVSLGTMKLPLDIDIARFEVLLFQWANSLCQGANLPLP 120
           KL PKSSDEN DI+PSEDDPEDGVSLGTMKLPLD DIARF+VLLFQWANSLCQGANLPLP
Sbjct: 61  KLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLP 120

Query: 121 VPMKVDKIPGGVRLGFITIGDGKTDVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSPPG 180
           VP+KVDKIP GVRLGFITIGDGKT+VLVYIDCLVFPATAS+ PIFRAIRNGRLKDQSPPG
Sbjct: 121 VPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPG 180

Query: 181 EPRIMRSLLSALKKSVEIS 199
           EPRIMRSLL ALKKSVEIS
Sbjct: 181 EPRIMRSLLGALKKSVEIS 199

[Close]

BLAST of Lcy04g012150 vs. ExPASy TrEMBL
Match: A0A5A7SHD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001480 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 9.2e-86
Identity = 167/199 (83.92%), Postives = 173/199 (86.93%), Query Frame = 0


Query: 1   MDAISYSTKQLIRHTSVNSRPCLLSTMASH-PSLVSVGWNTRRRQISKLSGGSGPCPRNP 60
           MDAISYST Q  RH +VNSRPC+LS M SH PSLV    NTR RQIS  S  SGPC R  
Sbjct: 1   MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRIS 60

Query: 61  KLAPKSSDENTDILPSEDDPEDGVSLGTMKLPLDIDIARFEVLLFQWANSLCQGANLPLP 120
            L PKSSDEN DI+PSEDDPEDGVSLGTMKLPLD DIARF+VLLFQWANSLCQGANLPLP
Sbjct: 61  NLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLP 120

Query: 121 VPMKVDKIPGGVRLGFITIGDGKTDVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSPPG 180
           VP+KVDKIP GVRLGFITIGDGKT+VLVYIDCLVFPATAST PIFRAIRNGRLKDQSPPG
Sbjct: 121 VPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPG 180

Query: 181 EPRIMRSLLSALKKSVEIS 199
           EPRIMRSLL ALKKSVEIS
Sbjct: 181 EPRIMRSLLGALKKSVEIS 199

[Close]

BLAST of Lcy04g012150 vs. ExPASy TrEMBL
Match: A0A1S3CH91 (uncharacterized protein LOC103500909 OS=Cucumis melo OX=3656 GN=LOC103500909 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 9.2e-86
Identity = 167/199 (83.92%), Postives = 173/199 (86.93%), Query Frame = 0


Query: 1   MDAISYSTKQLIRHTSVNSRPCLLSTMASH-PSLVSVGWNTRRRQISKLSGGSGPCPRNP 60
           MDAISYST Q  RH +VNSRPC+LS M SH PSLV    NTR RQIS  S  SGPC R  
Sbjct: 1   MDAISYSTNQFFRHPNVNSRPCVLSPMPSHNPSLVFFASNTRHRQISTFSQFSGPCHRIS 60

Query: 61  KLAPKSSDENTDILPSEDDPEDGVSLGTMKLPLDIDIARFEVLLFQWANSLCQGANLPLP 120
            L PKSSDEN DI+PSEDDPEDGVSLGTMKLPLD DIARF+VLLFQWANSLCQGANLPLP
Sbjct: 61  NLVPKSSDENNDIVPSEDDPEDGVSLGTMKLPLDTDIARFQVLLFQWANSLCQGANLPLP 120

Query: 121 VPMKVDKIPGGVRLGFITIGDGKTDVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSPPG 180
           VP+KVDKIP GVRLGFITIGDGKT+VLVYIDCLVFPATAST PIFRAIRNGRLKDQSPPG
Sbjct: 121 VPLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPG 180

Query: 181 EPRIMRSLLSALKKSVEIS 199
           EPRIMRSLL ALKKSVEIS
Sbjct: 181 EPRIMRSLLGALKKSVEIS 199

[Close]

BLAST of Lcy04g012150 vs. NCBI nr
Match: KAG6595177.1 (hypothetical protein SDJN03_11730, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 345.9 bits (886), Expect = 2.3e-91
Identity = 172/198 (86.87%), Postives = 185/198 (93.43%), Query Frame = 0


Query: 1   MDAISYSTKQLIRHTSVNSRPCLLSTMASHPSLVSVGWNTRRRQISKLSGGSGPCPRNPK 60
           M AI++STK LIRHT+VNSRP +LSTMASHPSLV VGWNTRRRQ SKLSG S PCPRN  
Sbjct: 1   MAAITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGVSSPCPRNMN 60

Query: 61  LAPKSSDENTDILPSEDDPEDGVSLGTMKLPLDIDIARFEVLLFQWANSLCQGANLPLPV 120
           LAPKSS+ENTDILPSED+PEDGVSLGTMKLP DIDIA+FEVLLFQWANSLCQGANLPLPV
Sbjct: 61  LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120

Query: 121 PMKVDKIPGGVRLGFITIGDGKTDVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSPPGE 180
           P++VDKI  GVRLGFI+IGDGKT+VLVYIDCLVFPATAS+ PIFRAIRNGRLKDQSPPGE
Sbjct: 121 PLRVDKITSGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180

Query: 181 PRIMRSLLSALKKSVEIS 199
           PRIMRSLLSALKKSVEI+
Sbjct: 181 PRIMRSLLSALKKSVEIA 198

[Close]

BLAST of Lcy04g012150 vs. NCBI nr
Match: XP_022972616.1 (uncharacterized protein LOC111471157 [Cucurbita maxima])

HSP 1 Score: 344.4 bits (882), Expect = 6.7e-91
Identity = 171/198 (86.36%), Postives = 184/198 (92.93%), Query Frame = 0


Query: 1   MDAISYSTKQLIRHTSVNSRPCLLSTMASHPSLVSVGWNTRRRQISKLSGGSGPCPRNPK 60
           M AI++STK LIRHT+VNSRP +LSTMASHPSLV VGWNTRRRQ SKLSG S PCPRN  
Sbjct: 1   MAAITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGVSSPCPRNMS 60

Query: 61  LAPKSSDENTDILPSEDDPEDGVSLGTMKLPLDIDIARFEVLLFQWANSLCQGANLPLPV 120
           LAPKSS+ENTDI PSED+PEDGVSLGTMKLP DIDIA+FEVLLFQWANSLCQGANLPLPV
Sbjct: 61  LAPKSSEENTDIFPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120

Query: 121 PMKVDKIPGGVRLGFITIGDGKTDVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSPPGE 180
           P++VDKI  GVRLGFI+IGDGKT+VLVYIDCLVFPATAS+ PIFRAIRNGRLKDQSPPGE
Sbjct: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180

Query: 181 PRIMRSLLSALKKSVEIS 199
           PRIMRSLLSALKKSVEI+
Sbjct: 181 PRIMRSLLSALKKSVEIA 198

[Close]

BLAST of Lcy04g012150 vs. NCBI nr
Match: XP_022962862.1 (uncharacterized protein LOC111463229 [Cucurbita moschata])

HSP 1 Score: 344.0 bits (881), Expect = 8.8e-91
Identity = 171/198 (86.36%), Postives = 184/198 (92.93%), Query Frame = 0


Query: 1   MDAISYSTKQLIRHTSVNSRPCLLSTMASHPSLVSVGWNTRRRQISKLSGGSGPCPRNPK 60
           M  I++STK LIRHT+VNSRP +LSTMASHPSLV VGWNTRRRQ SKLSG S PCPRN  
Sbjct: 1   MAVITHSTKHLIRHTTVNSRPSILSTMASHPSLVFVGWNTRRRQFSKLSGISSPCPRNMN 60

Query: 61  LAPKSSDENTDILPSEDDPEDGVSLGTMKLPLDIDIARFEVLLFQWANSLCQGANLPLPV 120
           LAPKSS+ENTDILPSED+PEDGVSLGTMKLP DIDIA+FEVLLFQWANSLCQGANLPLPV
Sbjct: 61  LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120

Query: 121 PMKVDKIPGGVRLGFITIGDGKTDVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSPPGE 180
           P++VDKI  GVRLGFI+IGDGKT+VLVYIDCLVFPATAS+ PIFRAIRNGRLKDQSPPGE
Sbjct: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180

Query: 181 PRIMRSLLSALKKSVEIS 199
           PRIMRSLLSALKKSVEI+
Sbjct: 181 PRIMRSLLSALKKSVEIA 198

[Close]

BLAST of Lcy04g012150 vs. NCBI nr
Match: XP_023517184.1 (uncharacterized protein LOC111781019 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342.8 bits (878), Expect = 2.0e-90
Identity = 170/198 (85.86%), Postives = 185/198 (93.43%), Query Frame = 0


Query: 1   MDAISYSTKQLIRHTSVNSRPCLLSTMASHPSLVSVGWNTRRRQISKLSGGSGPCPRNPK 60
           M +I++STK LIRHT+V+SRP +LSTMASHPSLV VGWNTRRRQ SKLSG S PCPRN  
Sbjct: 1   MASITHSTKHLIRHTTVDSRPSILSTMASHPSLVYVGWNTRRRQFSKLSGVSSPCPRNMN 60

Query: 61  LAPKSSDENTDILPSEDDPEDGVSLGTMKLPLDIDIARFEVLLFQWANSLCQGANLPLPV 120
           LAPKSS+ENTDILPSED+PEDGVSLGTMKLP DIDIA+FEVLLFQWANSLCQGANLPLPV
Sbjct: 61  LAPKSSEENTDILPSEDNPEDGVSLGTMKLPSDIDIAKFEVLLFQWANSLCQGANLPLPV 120

Query: 121 PMKVDKIPGGVRLGFITIGDGKTDVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSPPGE 180
           P++VDKI  GVRLGFI+IGDGKT+VLVYIDCLVFPATAS+ PIFRAIRNGRLKDQSPPGE
Sbjct: 121 PLRVDKIASGVRLGFISIGDGKTEVLVYIDCLVFPATASSSPIFRAIRNGRLKDQSPPGE 180

Query: 181 PRIMRSLLSALKKSVEIS 199
           PRIMRSLLSALKKSVEI+
Sbjct: 181 PRIMRSLLSALKKSVEIA 198

[Close]

BLAST of Lcy04g012150 vs. NCBI nr
Match: XP_038881940.1 (uncharacterized protein LOC120073272 [Benincasa hispida])

HSP 1 Score: 337.4 bits (864), Expect = 8.2e-89
Identity = 168/198 (84.85%), Postives = 180/198 (90.91%), Query Frame = 0


Query: 1   MDAISYSTKQLIRHTSVNSRPCLLSTMASHPSLVSVGWNTRRRQISKLSGGSGPCPRNPK 60
           M+AIS+STKQ I +T+VNSRPC+LS MASHPSLV V WNTR RQIS+ S  S PC RN K
Sbjct: 1   MEAISHSTKQFICYTTVNSRPCILSPMASHPSLVFVAWNTRHRQISRFSQLSSPCLRNTK 60

Query: 61  LAPKSSDENTDILPSEDDPEDGVSLGTMKLPLDIDIARFEVLLFQWANSLCQGANLPLPV 120
           L PKSSDEN DI+PSEDDPEDGVSLGTMKLP DIDIARF+VLLFQWANSLCQGANLPLPV
Sbjct: 61  LVPKSSDENYDIVPSEDDPEDGVSLGTMKLPSDIDIARFQVLLFQWANSLCQGANLPLPV 120

Query: 121 PMKVDKIPGGVRLGFITIGDGKTDVLVYIDCLVFPATASTGPIFRAIRNGRLKDQSPPGE 180
           P+KVDKIP GVRLGFITIGDGKT+VLVYIDCLVFPATA+T PIFRAIRNGRL+DQSPPGE
Sbjct: 121 PLKVDKIPSGVRLGFITIGDGKTEVLVYIDCLVFPATANTNPIFRAIRNGRLRDQSPPGE 180

Query: 181 PRIMRSLLSALKKSVEIS 199
           PRIMRSLL ALKKSVEIS
Sbjct: 181 PRIMRSLLGALKKSVEIS 198

[Close]

BLAST of Lcy04g012150 vs. TAIR 10
Match: AT2G36145.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 181.8 bits (460), Expect = 5.4e-46
Identity = 97/156 (62.18%), Postives = 114/156 (73.08%), Query Frame = 0


Query: 44  QISKLSGGSGPCPRNPKLAPKSSDENTDILPSEDDPEDGVSLGTMKLPLDIDIARFEVLL 103
           Q+   +G + P      +   +S  N  +   E   EDGVSLGTMKLP+D D+ARFE LL
Sbjct: 32  QVLPTNGAASPRQVKRAIVANASPGNGGVKAEE---EDGVSLGTMKLPVDTDLARFETLL 91

Query: 104 FQWANSLCQGANLPLPVPMKVDKIPGGVRLGFITIGD-GKTDVLVYIDCLVFPATASTGP 163
           FQWANSLCQGANLPLPVP+KVD+I GG RLGFI + D GKTDV VYIDCLVF  T   G 
Sbjct: 92  FQWANSLCQGANLPLPVPLKVDRISGGARLGFIVMEDEGKTDVPVYIDCLVF-QTTENGV 151

Query: 164 IFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIS 199
           +F+A RNGR KD++PPGE RIMRSLL ALKK+VEI+
Sbjct: 152 VFQATRNGRKKDKAPPGEERIMRSLLGALKKAVEIA 183

The following BLAST results are available for this feature:

BLAST of Lcy04g012150 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy04g012150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I6G0	3.3e-91	86.36	uncharacterized protein LOC111471157 OS=Cucurbita maxima OX=3661 GN=LOC111471157...	[more]
A0A6J1HDQ9	4.2e-91	86.36	uncharacterized protein LOC111463229 OS=Cucurbita moschata OX=3662 GN=LOC1114632...	[more]
A0A0A0KFD4	3.2e-86	83.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452740 PE=4 SV=1	[more]
A0A5A7SHD0	9.2e-86	83.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CH91	9.2e-86	83.92	uncharacterized protein LOC103500909 OS=Cucumis melo OX=3656 GN=LOC103500909 PE=...	[more]

BLAST of Lcy04g012150 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595177.1	2.3e-91	86.87	hypothetical protein SDJN03_11730, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022972616.1	6.7e-91	86.36	uncharacterized protein LOC111471157 [Cucurbita maxima]	[more]
XP_022962862.1	8.8e-91	86.36	uncharacterized protein LOC111463229 [Cucurbita moschata]	[more]
XP_023517184.1	2.0e-90	85.86	uncharacterized protein LOC111781019 [Cucurbita pepo subsp. pepo]	[more]
XP_038881940.1	8.2e-89	84.85	uncharacterized protein LOC120073272 [Benincasa hispida]	[more]

BLAST of Lcy04g012150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36145.1	5.4e-46	62.18	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..84
None	No IPR available	PANTHER	PTHR36352	EXPRESSED PROTEIN	coord: 7..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g012150.1	Lcy04g012150.1	mRNA