Lcy04g012050 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g012050
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr04: 43840865 .. 43841658 (+)
RNA-Seq Expression	Lcy04g012050
Synteny	Lcy04g012050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGCATTTATGTAATATCGAAAAGAAATTAGGGCAAAAAGTAAATCTAGAATCTTTAAATAGCACTCCTAAATCAACCGCACTACTCCCCTTTCTTCCTCCACCTTCCTCTGCACTTTCACAGAGATTATCAAACAAACAAACAAACAATCGATCAATCAATGGGCAACTGTCTCTTCCTCGACCAAAAGCCCATCAGAATCATGAAGACCGACGGCAAGATCCTCGAATACAAATCCCCGACGAGGGTCTTCCAGGTCCTCTCCGATTTCTCCGGCCACGCCATCTCCGACGCCGTTCCGGTCACCCACCATCTCCAACACACGGCCAAGCTCCTCTCCGGCCACCTCTACTTTCTGATCCCCACGCCCGCTCCGGAGTCGCCCGAGAAAAAGCCCAAGAAGGCGGTCCGGTTCGCGGATCCGGAGAAGGAGACGGAGGCCGGCGAGTGCAGCGGCGGCGGCGGGACGGGGCGGGTGGTTAGAATAAAGGTGGTGATGACGAAGAAGGAGCTTCAGGAGATGGTTGAGAGAGGGGGGATTACGGCGGATGAAATGATGTGTAAGATAAAAAGTGGGAGTGGGGAAATTAGTTGCAGAGAATTTGAGGATGAAGAAGAAGAGTTGCAGAGATGGAAGCCGGCTCTTGAAAGCATACCGGAAACTGAAGTTGCTTGCTAGCTAACTCCGTCCGCTTCCTATACTTTTTTTTTTTCTCTCTCTTTTTAGTTTAACATATACAGACTTAAAAGTGTAACAAACTTTAAAGGTGATGAGAAAACAACAGAGTTTTTGT

mRNA sequence

GGGCATTTATGTAATATCGAAAAGAAATTAGGGCAAAAAGTAAATCTAGAATCTTTAAATAGCACTCCTAAATCAACCGCACTACTCCCCTTTCTTCCTCCACCTTCCTCTGCACTTTCACAGAGATTATCAAACAAACAAACAAACAATCGATCAATCAATGGGCAACTGTCTCTTCCTCGACCAAAAGCCCATCAGAATCATGAAGACCGACGGCAAGATCCTCGAATACAAATCCCCGACGAGGGTCTTCCAGGTCCTCTCCGATTTCTCCGGCCACGCCATCTCCGACGCCGTTCCGGTCACCCACCATCTCCAACACACGGCCAAGCTCCTCTCCGGCCACCTCTACTTTCTGATCCCCACGCCCGCTCCGGAGTCGCCCGAGAAAAAGCCCAAGAAGGCGGTCCGGTTCGCGGATCCGGAGAAGGAGACGGAGGCCGGCGAGTGCAGCGGCGGCGGCGGGACGGGGCGGGTGGTTAGAATAAAGGTGGTGATGACGAAGAAGGAGCTTCAGGAGATGGTTGAGAGAGGGGGGATTACGGCGGATGAAATGATGTGTAAGATAAAAAGTGGGAGTGGGGAAATTAGTTGCAGAGAATTTGAGGATGAAGAAGAAGAGTTGCAGAGATGGAAGCCGGCTCTTGAAAGCATACCGGAAACTGAAGTTGCTTGCTAGCTAACTCCGTCCGCTTCCTATACTTTTTTTTTTTCTCTCTCTTTTTAGTTTAACATATACAGACTTAAAAGTGTAACAAACTTTAAAGGTGATGAGAAAACAACAGAGTTTTTGT

Coding sequence (CDS)

ATGGGCAACTGTCTCTTCCTCGACCAAAAGCCCATCAGAATCATGAAGACCGACGGCAAGATCCTCGAATACAAATCCCCGACGAGGGTCTTCCAGGTCCTCTCCGATTTCTCCGGCCACGCCATCTCCGACGCCGTTCCGGTCACCCACCATCTCCAACACACGGCCAAGCTCCTCTCCGGCCACCTCTACTTTCTGATCCCCACGCCCGCTCCGGAGTCGCCCGAGAAAAAGCCCAAGAAGGCGGTCCGGTTCGCGGATCCGGAGAAGGAGACGGAGGCCGGCGAGTGCAGCGGCGGCGGCGGGACGGGGCGGGTGGTTAGAATAAAGGTGGTGATGACGAAGAAGGAGCTTCAGGAGATGGTTGAGAGAGGGGGGATTACGGCGGATGAAATGATGTGTAAGATAAAAAGTGGGAGTGGGGAAATTAGTTGCAGAGAATTTGAGGATGAAGAAGAAGAGTTGCAGAGATGGAAGCCGGCTCTTGAAAGCATACCGGAAACTGAAGTTGCTTGCTAG

Protein sequence

MGNCLFLDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQHTAKLLSGHLYFLIPTPAPESPEKKPKKAVRFADPEKETEAGECSGGGGTGRVVRIKVVMTKKELQEMVERGGITADEMMCKIKSGSGEISCREFEDEEEELQRWKPALESIPETEVAC

Homology

[Close]

BLAST of Lcy04g012050 vs. ExPASy TrEMBL
Match: A0A6J1HG15 (uncharacterized protein LOC111463230 OS=Cucurbita moschata OX=3662 GN=LOC111463230 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.8e-69
Identity = 138/177 (77.97%), Postives = 152/177 (85.88%), Query Frame = 0


Query: 1   MGNCLFLDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQHTAKLLS 60
           MGNCL + Q PIRIMK DGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQ T KLLS
Sbjct: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60

Query: 61  GHLYFLIPTPAPESPEKKPKKAVRFADPEKETEAGECSGGGGTGRVVRIKVVMTKKELQE 120
           GHLYFLIPT  PE+ EK+ KKAVRFA+PEKET       GGG G+V+RIKVVMTKKEL+E
Sbjct: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKET-------GGGEGKVMRIKVVMTKKELEE 120

Query: 121 MVERGGITADEMMCKIKSGSGEISCREFEDEE-----EELQRWKPALESIPETEVAC 173
           MVERGGITADEM+CKIKSGSGEISCRE E+EE     EEL +W+P+L+SIPE+EVAC
Sbjct: 121 MVERGGITADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC 170

[Close]

BLAST of Lcy04g012050 vs. ExPASy TrEMBL
Match: A0A6J1I5B2 (uncharacterized protein LOC111471158 OS=Cucurbita maxima OX=3661 GN=LOC111471158 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.0e-69
Identity = 137/175 (78.29%), Postives = 153/175 (87.43%), Query Frame = 0


Query: 1   MGNCLFLDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQHTAKLLS 60
           MGNCL ++QKPIRIMK DGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHL+ T KLLS
Sbjct: 1   MGNCLIVEQKPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLKQTTKLLS 60

Query: 61  GHLYFLIPTPAPESPEKKPKKAVRFADPEKETEAGECSGGGGTGRVVRIKVVMTKKELQE 120
           GHLYFLIPT   E+ EK+ KKAVRFA+PEKET       GGG G+V+RIKVVMTKKEL+E
Sbjct: 61  GHLYFLIPTAGAEAVEKRGKKAVRFAEPEKET-------GGGEGKVMRIKVVMTKKELEE 120

Query: 121 MVERGGITADEMMCKIKSGSGEISCREFEDEE---EELQRWKPALESIPETEVAC 173
           MVERGGITADEM+CKIKSGSGEISCRE E+EE   EEL +W+P+L+SIPE+EVAC
Sbjct: 121 MVERGGITADEMICKIKSGSGEISCRELEEEEEDDEELHKWRPSLQSIPESEVAC 168

[Close]

BLAST of Lcy04g012050 vs. ExPASy TrEMBL
Match: A0A6J1IRC0 (uncharacterized protein LOC111477765 OS=Cucurbita maxima OX=3661 GN=LOC111477765 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 6.3e-67
Identity = 139/170 (81.76%), Postives = 150/170 (88.24%), Query Frame = 0


Query: 3   NCLFLDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQHTAKLLSGH 62
           NCLF+DQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGH ISDAVPV+ HL  TAKLL+GH
Sbjct: 5   NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKLLAGH 64

Query: 63  LYFLIPTPAPESPEKKPKKAVRFADPEKETEAGECSGGGGTGRVVRIKVVMTKKELQEMV 122
           LYFLIPT   E+ EKKPKK VRFAD EKE E+GE   GGGTGRVVRIK+VMTKKELQEMV
Sbjct: 65  LYFLIPT---EAAEKKPKKTVRFADSEKE-ESGE--NGGGTGRVVRIKLVMTKKELQEMV 124

Query: 123 ERGGITADEMMCKIKSGSGEISCREFEDEEEELQRWKPALESIPETEVAC 173
           ERGGI+ DEM+CKIKSGSGEISC E E+ EE  QRWKPAL+SIPE+EVAC
Sbjct: 125 ERGGISGDEMVCKIKSGSGEISCTELEEAEE--QRWKPALQSIPESEVAC 166

[Close]

BLAST of Lcy04g012050 vs. ExPASy TrEMBL
Match: A0A6J1BU81 (uncharacterized protein LOC111005826 OS=Momordica charantia OX=3673 GN=LOC111005826 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.3e-64
Identity = 135/173 (78.03%), Postives = 149/173 (86.13%), Query Frame = 0


Query: 1   MGNCLFLDQKPIRIMKTDGKILEYKSPTRVFQVLSDFS-GHAISDAVPVTHHLQHTAKLL 60
           MGNCLF+++KPIRIMK+DGKILEYKSPTRVFQVLSDFS GHAI+DAVPVTHHL H+AKLL
Sbjct: 1   MGNCLFVEEKPIRIMKSDGKILEYKSPTRVFQVLSDFSGGHAIADAVPVTHHLHHSAKLL 60

Query: 61  SGHLYFLIPTPAPESPEKKPKKAVRFADPEKETEAGECSGGGGTGRVVRIKVVMTKKELQ 120
           SGHLYFLIPT +    E+KPKKAVRFA PEKET  GE SG    GR +RIKVVMTKKEL+
Sbjct: 61  SGHLYFLIPTDSAPEAEEKPKKAVRFAVPEKETGEGEISG----GRAIRIKVVMTKKELE 120

Query: 121 EMVERGGITADEMMCKIKSGSGEISCREFEDEEEELQRWKPALESIPETEVAC 173
           EM+E GGI  DEMM KIKS SGEISCR+ E E+EELQRWKPALESIPETE+ C
Sbjct: 121 EMIENGGIWGDEMMSKIKS-SGEISCRD-ELEKEELQRWKPALESIPETEIDC 167

[Close]

BLAST of Lcy04g012050 vs. ExPASy TrEMBL
Match: A0A1S3CHA7 (uncharacterized protein LOC103500900 OS=Cucumis melo OX=3656 GN=LOC103500900 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.3e-64
Identity = 139/178 (78.09%), Postives = 147/178 (82.58%), Query Frame = 0


Query: 3   NCLFLDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQHTAKLLSGH 62
           NCLF+D KPIRIMKTDGKILEYKSPTRVFQVLSDFSGH ISDAVPVTHHL  TAKLLSGH
Sbjct: 5   NCLFVDHKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHEISDAVPVTHHLHRTAKLLSGH 64

Query: 63  LYFLIPTPAPESPEKKPKKAVRFADPEKETEAGECSGGGGTGRVVRIKVVMTKKELQEMV 122
           LYFLIP    E  EKKPKKAVRFA+PEKET A   +GGG    VVRIKVVMTKKELQEMV
Sbjct: 65  LYFLIP---KEPHEKKPKKAVRFAEPEKET-ASATTGGG----VVRIKVVMTKKELQEMV 124

Query: 123 ERGGITADEMMCKIKSGSGEISCR--------EFEDEEEELQRWKPALESIPETEVAC 173
           ERGGI+A+EM+CKIK+G GEIS R        E EDEE ELQRWKP LESIPE+EVAC
Sbjct: 125 ERGGISAEEMICKIKNGRGEISSRSEMEEEEEEEEDEESELQRWKPVLESIPESEVAC 174

[Close]

BLAST of Lcy04g012050 vs. NCBI nr
Match: XP_022962863.1 (uncharacterized protein LOC111463230 [Cucurbita moschata])

HSP 1 Score: 271.9 bits (694), Expect = 3.7e-69
Identity = 138/177 (77.97%), Postives = 152/177 (85.88%), Query Frame = 0


Query: 1   MGNCLFLDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQHTAKLLS 60
           MGNCL + Q PIRIMK DGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQ T KLLS
Sbjct: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60

Query: 61  GHLYFLIPTPAPESPEKKPKKAVRFADPEKETEAGECSGGGGTGRVVRIKVVMTKKELQE 120
           GHLYFLIPT  PE+ EK+ KKAVRFA+PEKET       GGG G+V+RIKVVMTKKEL+E
Sbjct: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKET-------GGGEGKVMRIKVVMTKKELEE 120

Query: 121 MVERGGITADEMMCKIKSGSGEISCREFEDEE-----EELQRWKPALESIPETEVAC 173
           MVERGGITADEM+CKIKSGSGEISCRE E+EE     EEL +W+P+L+SIPE+EVAC
Sbjct: 121 MVERGGITADEMICKIKSGSGEISCRELEEEEDDDDDEELHKWRPSLQSIPESEVAC 170

[Close]

BLAST of Lcy04g012050 vs. NCBI nr
Match: XP_022972617.1 (uncharacterized protein LOC111471158 [Cucurbita maxima])

HSP 1 Score: 270.8 bits (691), Expect = 8.2e-69
Identity = 137/175 (78.29%), Postives = 153/175 (87.43%), Query Frame = 0


Query: 1   MGNCLFLDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQHTAKLLS 60
           MGNCL ++QKPIRIMK DGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHL+ T KLLS
Sbjct: 1   MGNCLIVEQKPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLKQTTKLLS 60

Query: 61  GHLYFLIPTPAPESPEKKPKKAVRFADPEKETEAGECSGGGGTGRVVRIKVVMTKKELQE 120
           GHLYFLIPT   E+ EK+ KKAVRFA+PEKET       GGG G+V+RIKVVMTKKEL+E
Sbjct: 61  GHLYFLIPTAGAEAVEKRGKKAVRFAEPEKET-------GGGEGKVMRIKVVMTKKELEE 120

Query: 121 MVERGGITADEMMCKIKSGSGEISCREFEDEE---EELQRWKPALESIPETEVAC 173
           MVERGGITADEM+CKIKSGSGEISCRE E+EE   EEL +W+P+L+SIPE+EVAC
Sbjct: 121 MVERGGITADEMICKIKSGSGEISCRELEEEEEDDEELHKWRPSLQSIPESEVAC 168

[Close]

BLAST of Lcy04g012050 vs. NCBI nr
Match: KAG7027198.1 (hypothetical protein SDJN02_11209, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266.5 bits (680), Expect = 1.5e-67
Identity = 134/172 (77.91%), Postives = 148/172 (86.05%), Query Frame = 0


Query: 1   MGNCLFLDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQHTAKLLS 60
           MGNCL + Q PIRIMK DGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQ T KLLS
Sbjct: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60

Query: 61  GHLYFLIPTPAPESPEKKPKKAVRFADPEKETEAGECSGGGGTGRVVRIKVVMTKKELQE 120
           GHLYFLIPT  PE+ EK+ KKAVRFA+PEKET       GGG G+V+RIKVVMTKKEL+E
Sbjct: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKET-------GGGEGKVIRIKVVMTKKELEE 120

Query: 121 MVERGGITADEMMCKIKSGSGEISCREFEDEEEELQRWKPALESIPETEVAC 173
           MVERGGITADEM+CKIKSGSGEISC E    +EEL +W+P+L+SIPE+EVAC
Sbjct: 121 MVERGGITADEMICKIKSGSGEISCTEL---DEELHKWRPSLQSIPESEVAC 162

[Close]

BLAST of Lcy04g012050 vs. NCBI nr
Match: KAG6595182.1 (hypothetical protein SDJN03_11735, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.8 bits (678), Expect = 2.6e-67
Identity = 134/172 (77.91%), Postives = 148/172 (86.05%), Query Frame = 0


Query: 1   MGNCLFLDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQHTAKLLS 60
           MGNCL + Q PIRIMK DGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQ T KLLS
Sbjct: 1   MGNCLIVQQNPIRIMKPDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQQTTKLLS 60

Query: 61  GHLYFLIPTPAPESPEKKPKKAVRFADPEKETEAGECSGGGGTGRVVRIKVVMTKKELQE 120
           GHLYFLIPT  PE+ EK+ KKAVRFA+PEKET       GGG G+V+RIKVVMTKKEL+E
Sbjct: 61  GHLYFLIPTAGPEAGEKRGKKAVRFAEPEKET-------GGGEGKVMRIKVVMTKKELEE 120

Query: 121 MVERGGITADEMMCKIKSGSGEISCREFEDEEEELQRWKPALESIPETEVAC 173
           MVERGGITADEM+CKIKSGSGEISC E    +EEL +W+P+L+SIPE+EVAC
Sbjct: 121 MVERGGITADEMICKIKSGSGEISCTEL---DEELHKWRPSLQSIPESEVAC 162

[Close]

BLAST of Lcy04g012050 vs. NCBI nr
Match: KAG7034500.1 (hypothetical protein SDJN02_04230, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.0 bits (676), Expect = 4.5e-67
Identity = 137/172 (79.65%), Postives = 149/172 (86.63%), Query Frame = 0


Query: 3   NCLFLDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQHTAKLLSGH 62
           NCLF+DQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGH ISDAVPV+ HL  TAKLL+GH
Sbjct: 5   NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVSQHLHPTAKLLAGH 64

Query: 63  LYFLIPTPAPESPEKKPKKAVRFADPEKETEAGECSG--GGGTGRVVRIKVVMTKKELQE 122
           LYFLIP    E+ EKKPKK VRFAD EKE   G+  G  GGGTGRVVRIK+VMTKKELQE
Sbjct: 65  LYFLIPA---EAAEKKPKKTVRFADSEKEESGGDGGGENGGGTGRVVRIKLVMTKKELQE 124

Query: 123 MVERGGITADEMMCKIKSGSGEISCREFEDEEEELQRWKPALESIPETEVAC 173
           MVERGGI+ DEM+CKIKSGSGEISC E E++EE  QRWKPAL+SIPE+EVAC
Sbjct: 125 MVERGGISGDEMICKIKSGSGEISCTELEEDEE--QRWKPALQSIPESEVAC 171

[Close]

BLAST of Lcy04g012050 vs. TAIR 10
Match: AT3G10120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03890.1); Has 57 Blast hits to 57 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 1.9e-23
Identity = 68/179 (37.99%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 1   MGNCLFLDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGH-AISDAVPVTHHLQHTAKLL 60
           MGNCL +++K I+IM+ DGK++EY+ P +V  +L+ FS H ++ D++    HL   AKLL
Sbjct: 1   MGNCLVMEKKVIKIMRNDGKVVEYRGPMKVHHILTQFSPHYSLFDSLTNNCHLHPQAKLL 60

Query: 61  SGHLYFLIPTPAPESPE-KKPKKAVRFADPEKETEAGE-------CSG-GGGTGRVVRIK 120
            G LY+L+P         KK  K VRFA+PE E E  E       C      T  VVR+K
Sbjct: 61  CGRLYYLLPQETNSIKHMKKTMKKVRFANPEVEKEEQEEDRLTDCCDNTKEKTNGVVRVK 120

Query: 121 VVMTKKELQEMVERGGITADEMMCKIKSGSGEISCREFEDEEEELQRWKPALESIPETE 170
           +V++K+EL+++++ G +   EM+   ++ + +  C   +D+E   + W+P L+SIPET+
Sbjct: 121 MVVSKQELEKLLQGGSV--HEMV--YRTLAKQHLCD--DDDECHKEGWRPLLDSIPETD 173

[Close]

BLAST of Lcy04g012050 vs. TAIR 10
Match: AT5G03890.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10120.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 1.9e-23
Identity = 71/183 (38.80%), Postives = 107/183 (58.47%), Query Frame = 0


Query: 1   MGNCLFLDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHAISDAVPVTHHLQHTAKLLS 60
           MGNCL +++K I+I++ DGK+LEY+ P  V  +L+ FSGH+IS       HL   AKLLS
Sbjct: 1   MGNCLVMEKKVIKIVRDDGKVLEYREPISVHHILTQFSGHSISHN---NTHLLPDAKLLS 60

Query: 61  GHLYFLIPTPAPESPEKKPKKAVRFADPEKE------------TEAGECSGGGGTGR--V 120
           G LY+L+PT      +KK  K V FA+PE E            +E+     G  T    V
Sbjct: 61  GRLYYLLPT---TMTKKKVNKKVTFANPEVEGDERLLREEEDSSESNSNIDGDDTKNVTV 120

Query: 121 VRIKVVMTKKELQEMVERGGITADEMMCKIKSGSGEISCREFEDEEEELQRWKPALESIP 170
           VR+K+V+ K+EL+++++ G +   EMM +       ++  + +D+ E    W+PAL+SIP
Sbjct: 121 VRMKIVVHKQELEKLLQGGSV--HEMMYQTLEKQLLLTSSD-DDDLECNSGWRPALDSIP 174

[Close]

BLAST of Lcy04g012050 vs. TAIR 10
Match: AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 7.3e-07
Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 73  ESPEKKPKKAVRFADPEKETEAGECSGGGGT---GRVVRIKVVMTKKELQEMV-ERGGIT 132
           E  +  P+  V+  +  K +  GE      T    +VVRIKVV+TKKEL++++  + GI 
Sbjct: 15  EKDDLDPEPLVKLLEEGKTSFRGEEESERSTEEESKVVRIKVVVTKKELRQILGHKNGIN 74

Query: 133 ADEMMCKIKSGSG-EISCREFEDEEEEL--QRWKPALESIPET 169
           + + +  +   SG  IS   +E++E+E   + W+P LESIPE+
Sbjct: 75  SIQQLVHVLKDSGRNISMASYEEDEKEEGDENWRPTLESIPES 117

[Close]

BLAST of Lcy04g012050 vs. TAIR 10
Match: AT1G64700.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 3.6e-06
Identity = 29/75 (38.67%), Postives = 40/75 (53.33%), Query Frame = 0


Query: 1  MGNCLF------LDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHAISDAVPVT-HHLQ 60
          MGNCLF       +   I+++K+DG +LE+ SP     V   FSGHA+  AV +    L 
Sbjct: 1  MGNCLFGGLGDEEEDLLIKVIKSDGGVLEFYSPVTAGFVSHGFSGHALFSAVDLLWKPLA 60

Query: 61 HTAKLLSGHLYFLIP 69
          H   L+ G  Y+L P
Sbjct: 61 HDHLLVPGQSYYLFP 75

The following BLAST results are available for this feature:

BLAST of Lcy04g012050 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy04g012050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HG15	1.8e-69	77.97	uncharacterized protein LOC111463230 OS=Cucurbita moschata OX=3662 GN=LOC1114632...	[more]
A0A6J1I5B2	4.0e-69	78.29	uncharacterized protein LOC111471158 OS=Cucurbita maxima OX=3661 GN=LOC111471158...	[more]
A0A6J1IRC0	6.3e-67	81.76	uncharacterized protein LOC111477765 OS=Cucurbita maxima OX=3661 GN=LOC111477765...	[more]
A0A6J1BU81	1.3e-64	78.03	uncharacterized protein LOC111005826 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A1S3CHA7	1.3e-64	78.09	uncharacterized protein LOC103500900 OS=Cucumis melo OX=3656 GN=LOC103500900 PE=...	[more]

BLAST of Lcy04g012050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962863.1	3.7e-69	77.97	uncharacterized protein LOC111463230 [Cucurbita moschata]	[more]
XP_022972617.1	8.2e-69	78.29	uncharacterized protein LOC111471158 [Cucurbita maxima]	[more]
KAG7027198.1	1.5e-67	77.91	hypothetical protein SDJN02_11209, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6595182.1	2.6e-67	77.91	hypothetical protein SDJN03_11735, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7034500.1	4.5e-67	79.65	hypothetical protein SDJN02_04230, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lcy04g012050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10120.1	1.9e-23	37.99	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G03890.1	1.9e-23	38.80	unknown protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cel...	[more]
AT3G21680.1	7.3e-07	34.95	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G64700.1	3.6e-06	38.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..167 e-value: 4.4E-18 score: 66.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..94
None	No IPR available	PANTHER	PTHR33148	PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED	coord: 1..168
None	No IPR available	PANTHER	PTHR33148:SF46	EXPRESSED PROTEIN	coord: 1..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g012050.1	Lcy04g012050.1	mRNA