Lcy04g011390 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGACTAAGTGAAGAAGAGAGAAATAAAGCAACTTTAATCATATGGAATCTATGGTCATATCGAAACAAAACCATGTCTAGTGGAACCAAAGCAGATCAGAGGCAGATTGCTGGAGCTATAGAAGTCAGCTTTGAGGAACAAATCAAGATTAGAGATACTAACCTGGTTGGCCAGCCATTGGAGTCGAGCTTTGTGGACCCCTCCCCCCATCCGTGCTTAAAGTTGAATTCTGATGCCTTGTGGAGTAGTGCTGAAAGCTCGGGCGGTTTTGGATGGACGATCCGTGACTCCGCTGGGTCTTTGATCGAAGAATTGGTCAATTCTTGCACTAGAAGCTGCTGCTTTGAAGGAGGGCATCTCGAATTACCTTAA ATGGAAAGACTAAGTGAAGAAGAGAGAAATAAAGCAACTTTAATCATATGGAATCTATGGTCATATCGAAACAAAACCATGTCTAGTGGAACCAAAGCAGATCAGAGGCAGATTGCTGGAGCTATAGAAGTCAGCTTTGAGGAACAAATCAAGATTAGAGATACTAACCTGGTTGGCCAGCCATTGGAGTCGAGCTTTGTGGACCCCTCCCCCCATCCGTGCTTAAAGTTGAATTCTGATGCCTTGTGGAGTAGTGCTGAAAGCTCGGGCGGTTTTGGATGGACGATCCGTGACTCCGCTGGGTCTTTGATCGAAGAATTGGTCAATTCTTGCACTAGAAGCTGCTGCTTTGAAGGAGGGCATCTCGAATTACCTTAA ATGGAAAGACTAAGTGAAGAAGAGAGAAATAAAGCAACTTTAATCATATGGAATCTATGGTCATATCGAAACAAAACCATGTCTAGTGGAACCAAAGCAGATCAGAGGCAGATTGCTGGAGCTATAGAAGTCAGCTTTGAGGAACAAATCAAGATTAGAGATACTAACCTGGTTGGCCAGCCATTGGAGTCGAGCTTTGTGGACCCCTCCCCCCATCCGTGCTTAAAGTTGAATTCTGATGCCTTGTGGAGTAGTGCTGAAAGCTCGGGCGGTTTTGGATGGACGATCCGTGACTCCGCTGGGTCTTTGATCGAAGAATTGGTCAATTCTTGCACTAGAAGCTGCTGCTTTGAAGGAGGGCATCTCGAATTACCTTAA MERLSEEERNKATLIIWNLWSYRNKTMSSGTKADQRQIAGAIEVSFEEQIKIRDTNLVGQPLESSFVDPSPHPCLKLNSDALWSSAESSGGFGWTIRDSAGSLIEELVNSCTRSCCFEGGHLELP Homology
BLAST of Lcy04g011390 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 7.0e-07 Identity = 36/118 (30.51%), Postives = 56/118 (47.46%), Query Frame = 0
BLAST of Lcy04g011390 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 5.9e-06 Identity = 35/118 (29.66%), Postives = 56/118 (47.46%), Query Frame = 0
BLAST of Lcy04g011390 vs. ExPASy TrEMBL
Match: A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04 Identity = 34/117 (29.06%), Postives = 59/117 (50.43%), Query Frame = 0
BLAST of Lcy04g011390 vs. ExPASy TrEMBL
Match: A0A6J1DQC9 (uncharacterized protein LOC111022134 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04 Identity = 34/117 (29.06%), Postives = 59/117 (50.43%), Query Frame = 0
BLAST of Lcy04g011390 vs. ExPASy TrEMBL
Match: A0A6J5X9J3 (RNase H domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS29306 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 9.5e-04 Identity = 29/104 (27.88%), Postives = 41/104 (39.42%), Query Frame = 0
BLAST of Lcy04g011390 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia]) HSP 1 Score: 63.5 bits (153), Expect = 1.4e-06 Identity = 36/118 (30.51%), Postives = 56/118 (47.46%), Query Frame = 0
BLAST of Lcy04g011390 vs. NCBI nr
Match: KAF2619702.1 (hypothetical protein F2Q68_00042564 [Brassica cretica]) HSP 1 Score: 62.0 bits (149), Expect = 4.2e-06 Identity = 30/91 (32.97%), Postives = 46/91 (50.55%), Query Frame = 0
BLAST of Lcy04g011390 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia]) HSP 1 Score: 60.5 bits (145), Expect = 1.2e-05 Identity = 35/118 (29.66%), Postives = 56/118 (47.46%), Query Frame = 0
BLAST of Lcy04g011390 vs. NCBI nr
Match: KAG5387786.1 (hypothetical protein IGI04_029327, partial [Brassica rapa subsp. trilocularis]) HSP 1 Score: 59.3 bits (142), Expect = 2.7e-05 Identity = 33/92 (35.87%), Postives = 47/92 (51.09%), Query Frame = 0
BLAST of Lcy04g011390 vs. NCBI nr
Match: XP_022154990.1 (uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]) HSP 1 Score: 56.2 bits (134), Expect = 2.3e-04 Identity = 34/117 (29.06%), Postives = 59/117 (50.43%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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