Lcy04g009020 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g009020
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Clathrin light chain
Location	Chr04: 40241529 .. 40243479 (+)
RNA-Seq Expression	Lcy04g009020
Synteny	Lcy04g009020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGGTCGCGAAGTTGCAGAGAGAAACATTCGCGCGGAAAGATTCATTGACTGTTGCCCGTCGCCGGAGGGAGAAACAGAATACGCCAACGCCATGTCAACCTTCGCCGGAACTCCTCCTCCTCCTCCGTTCGACGACGACACCATCGGATTCGAACCTCGCCTCTCTTCTCAGCGATTCGAATCCTTTTCTAGCTTCGAAGCCGACTCCGCCGCCGGCGACTCGCCACCGATCTTTGGCAACCGGCCGTACAAACAGGGAGACGACCTGCCGCCGACTCCGCCTTCGAATTTCTCAGCCGGTGGAGGATTCTCGAGTTTCTCGCCTGAGCAGAACGGCAAGGGCTTTGACGGAGGTTTTGGCGAATCGGACGGCCCGATCCTCTCCTCTCCGACGGCGATGGAGCCGGAGGAAGGATTTCCTTTGAGAGAGTGGCGCAGGTGAGAAATCTGTTAAACTTCTTCGCGATTGTATGATTGTTGACATAAGTTTTTGAGGTCAATCTGTCATCGGCATCATCGAGTTGCAGGCTCACTGAGATTAAATCCTTAATCTTATAAACCGAATAAAAATTTTTCAAATATCTTATGGATGAACGATGTATATGGCGTAATTTGTGTACATGGAAGTAATTCTGTTCTTATCGTTACTCACTGTTCTTGTGCAATCAAGCTGCGAATGGCAGATTGAATGCGATTCGATTGGAAGAAAAGGAGAAGAGGGAGAAGGAGCTGTTGCAAGAGATAATCGATGAGGCTGATCAGTACAAAATTGATTTCTACAGGAGGCGAAAGCTTGCTCTTGATAACAGCAAAGCTTCAAATAGAGATAAGGAAAAGGTGAATTGGCTAGATTCCAACCAACTTCACTGAATTTCACTATATACTGAAAATTCCTCTTGATCTTCTTTAACATAAATGAAGCACAGATTAATGTGATTTTGTGAGGTATTGAATTGATTTGGCTTCTGAATCTATGATGGATTTTGTGGGATATTGTTGATCGTAGCTCAATTGATTAAAGTATAATAAGTTCGACTAAAAGGTCACCGGTATGTTGGTGAACTCGAAAAATAAAAGAAGATATTTATATGGCTCACTAGAACCATGGGATTTTCTTCTTGTATGAACTCAGTTGTGATTATTTTTCTTTGTTTTTGGTGCATAAAGAATGGTAAACCTTTACATAATTCCCCCCATTCATGCTTCATAAATCTTAACCAGATTTGAACTTCATATGACAGCAATACCTAGCAAACCGAGAGAAGTTCCACGCCGAAGCCGAGAAGAATTATTGGAAGGCAATTGCAGAGCTAATCCCCAATGAGGTTCCTGCCATAGAACAAAGGGGGAAGAAAGACAAGGAGAAGAAGCCTGCCATTGTTGTTATTCAGGGTCCCAAGCCCGGGAAGCCGACCGATCTCTCGAGAATGCGTCAAATACATTTGAAGCTCAAACACAACACCCCAGTGCACATGAAGCCTAAACCATCACCACCACCACCACCAGAATCTAAAACAGACCCTAAAAAGGATTCTTCTGCTGCTGGCGCAACTTTGACTGCTGGTTCGGGTTCTGCTACTTCAAAGACTGCTGCTGTTGCAACTTCTGAGGGTACAACTGCTGGTTGAAATCGGTCGGTATATATATTATACTCCCTCTTATGTATGTTCAGAAACAACTAGCTATATCACGGATCTTGATGTCTAGTACTAGTCAGTTATAGTCAACAAATCACTTAAGAAATCTAGCAATCTTTCTAGGTAGAGCCACAAAAAGCTACGAAAATCCTTGCCCGTGCCCCGATTTCAATGGATTATTGTATTTGGATAGTTGTAACTGCTTAAGTTTTTCTCCTGTTCTGTGAATATATATATATGCTGTTTCTATGCTACATTTGAACATGTTGTCGAACTTGGAAGTTGGAAGATTAATTGGTAGTTTTTTTTTTTT

mRNA sequence

ACGGTCGCGAAGTTGCAGAGAGAAACATTCGCGCGGAAAGATTCATTGACTGTTGCCCGTCGCCGGAGGGAGAAACAGAATACGCCAACGCCATGTCAACCTTCGCCGGAACTCCTCCTCCTCCTCCGTTCGACGACGACACCATCGGATTCGAACCTCGCCTCTCTTCTCAGCGATTCGAATCCTTTTCTAGCTTCGAAGCCGACTCCGCCGCCGGCGACTCGCCACCGATCTTTGGCAACCGGCCGTACAAACAGGGAGACGACCTGCCGCCGACTCCGCCTTCGAATTTCTCAGCCGGTGGAGGATTCTCGAGTTTCTCGCCTGAGCAGAACGGCAAGGGCTTTGACGGAGGTTTTGGCGAATCGGACGGCCCGATCCTCTCCTCTCCGACGGCGATGGAGCCGGAGGAAGGATTTCCTTTGAGAGAGTGGCGCAGATTGAATGCGATTCGATTGGAAGAAAAGGAGAAGAGGGAGAAGGAGCTGTTGCAAGAGATAATCGATGAGGCTGATCAGTACAAAATTGATTTCTACAGGAGGCGAAAGCTTGCTCTTGATAACAGCAAAGCTTCAAATAGAGATAAGGAAAAGCAATACCTAGCAAACCGAGAGAAGTTCCACGCCGAAGCCGAGAAGAATTATTGGAAGGCAATTGCAGAGCTAATCCCCAATGAGGTTCCTGCCATAGAACAAAGGGGGAAGAAAGACAAGGAGAAGAAGCCTGCCATTGTTGTTATTCAGGGTCCCAAGCCCGGGAAGCCGACCGATCTCTCGAGAATGCGTCAAATACATTTGAAGCTCAAACACAACACCCCAGTGCACATGAAGCCTAAACCATCACCACCACCACCACCAGAATCTAAAACAGACCCTAAAAAGGATTCTTCTGCTGCTGGCGCAACTTTGACTGCTGGTTCGGGTTCTGCTACTTCAAAGACTGCTGCTGTTGCAACTTCTGAGGGTACAACTGCTGGTTGAAATCGGTCGGTATATATATTATACTCCCTCTTATGTATGTTCAGAAACAACTAGCTATATCACGGATCTTGATGTCTAGTACTAGTCAGTTATAGTCAACAAATCACTTAAGAAATCTAGCAATCTTTCTAGGTAGAGCCACAAAAAGCTACGAAAATCCTTGCCCGTGCCCCGATTTCAATGGATTATTGTATTTGGATAGTTGTAACTGCTTAAGTTTTTCTCCTGTTCTGTGAATATATATATATGCTGTTTCTATGCTACATTTGAACATGTTGTCGAACTTGGAAGTTGGAAGATTAATTGGTAGTTTTTTTTTTTT

Coding sequence (CDS)

ATGTCAACCTTCGCCGGAACTCCTCCTCCTCCTCCGTTCGACGACGACACCATCGGATTCGAACCTCGCCTCTCTTCTCAGCGATTCGAATCCTTTTCTAGCTTCGAAGCCGACTCCGCCGCCGGCGACTCGCCACCGATCTTTGGCAACCGGCCGTACAAACAGGGAGACGACCTGCCGCCGACTCCGCCTTCGAATTTCTCAGCCGGTGGAGGATTCTCGAGTTTCTCGCCTGAGCAGAACGGCAAGGGCTTTGACGGAGGTTTTGGCGAATCGGACGGCCCGATCCTCTCCTCTCCGACGGCGATGGAGCCGGAGGAAGGATTTCCTTTGAGAGAGTGGCGCAGATTGAATGCGATTCGATTGGAAGAAAAGGAGAAGAGGGAGAAGGAGCTGTTGCAAGAGATAATCGATGAGGCTGATCAGTACAAAATTGATTTCTACAGGAGGCGAAAGCTTGCTCTTGATAACAGCAAAGCTTCAAATAGAGATAAGGAAAAGCAATACCTAGCAAACCGAGAGAAGTTCCACGCCGAAGCCGAGAAGAATTATTGGAAGGCAATTGCAGAGCTAATCCCCAATGAGGTTCCTGCCATAGAACAAAGGGGGAAGAAAGACAAGGAGAAGAAGCCTGCCATTGTTGTTATTCAGGGTCCCAAGCCCGGGAAGCCGACCGATCTCTCGAGAATGCGTCAAATACATTTGAAGCTCAAACACAACACCCCAGTGCACATGAAGCCTAAACCATCACCACCACCACCACCAGAATCTAAAACAGACCCTAAAAAGGATTCTTCTGCTGCTGGCGCAACTTTGACTGCTGGTTCGGGTTCTGCTACTTCAAAGACTGCTGCTGTTGCAACTTCTGAGGGTACAACTGCTGGTTGA

Protein sequence

MSTFAGTPPPPPFDDDTIGFEPRLSSQRFESFSSFEADSAAGDSPPIFGNRPYKQGDDLPPTPPSNFSAGGGFSSFSPEQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNSKASNRDKEKQYLANREKFHAEAEKNYWKAIAELIPNEVPAIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPVHMKPKPSPPPPPESKTDPKKDSSAAGATLTAGSGSATSKTAAVATSEGTTAG

Homology

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BLAST of Lcy04g009020 vs. ExPASy Swiss-Prot
Match: O04209 (Clathrin light chain 2 OS=Arabidopsis thaliana OX=3702 GN=CLC2 PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.2e-55
Identity = 128/236 (54.24%), Postives = 164/236 (69.49%), Query Frame = 0


Query: 30  ESFSSFEADSAAGDSPPIFGNRPYKQGDDLPPTPPSNFSAGGGFSSFSPEQNGKGFDGGF 89
           +SFS+F+      DS            DD+   P S++ A           NG G  G  
Sbjct: 30  DSFSAFDGSLQVEDSV-----------DDVFAAPSSDYGA---------YSNGDGIFGSN 89

Query: 90  GESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYR 149
           G+ DGPIL  P+ ME +EGF LREWRR NAI+LEEKEKREKELL++II+EADQYK +F++
Sbjct: 90  GDHDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKELLKQIIEEADQYKEEFHK 149

Query: 150 RRKLALDNSKASNRDKEKQYLANREKFHAEAEKNYWKAIAELIPNEVPAIE-QRGKKDKE 209
           + ++  +N+KA+NR+KEK YL N+EKF+AE+ KNYWKAIAEL+P EVP IE +RGKK+++
Sbjct: 150 KIEVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAELVPKEVPTIEKRRGKKEQQ 209

Query: 210 --KKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPVHMKPKPSPPPPPESKTDPK 263
             KKP + VIQGPKPGKPTDL+RMRQI +KLKHN P H+K   S PP  E+   PK
Sbjct: 210 DPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNPPSHLK-LTSQPPSEEAAAPPK 244

[Close]

BLAST of Lcy04g009020 vs. ExPASy Swiss-Prot
Match: F4J5M9 (Clathrin light chain 3 OS=Arabidopsis thaliana OX=3702 GN=At3g51890 PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.3e-53
Identity = 128/234 (54.70%), Postives = 158/234 (67.52%), Query Frame = 0


Query: 20  FEPRLSSQRFE-SFSSFEADSAAGDSPPIFGNRPYKQGDDLPPTPPSNFSAGGGFSSFSP 79
           +E R  SQRF+ SFS+F       DS P       ++  DLP           G SS  P
Sbjct: 32  YESRFQSQRFDSSFSNF-------DSQP-------EKESDLP----------CGDSSPRP 91

Query: 80  EQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREKELLQEIID 139
           E         F +++  IL  P+AME EEGF LREWRRLNA+RLEEKEK EKE++Q+I++
Sbjct: 92  ETQSPPSINSFDDTNDSILPPPSAMEKEEGFALREWRRLNALRLEEKEKEEKEMVQQILE 151

Query: 140 EADQYKIDFYRRRKLALDNSKASNRDKEKQYLANREKFHAEAEKNYWKAIAELIPNEVPA 199
            A+QYK +FY +R + ++N+K  NR+KEK +L N+EKF+AEA+KN WKAIAELIP EVP 
Sbjct: 152 AAEQYKAEFYSKRNVTIENNKKLNREKEKFFLENQEKFYAEADKNNWKAIAELIPREVPV 211

Query: 200 IEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPVHMKPK-PSP 252
           IE RG  +K+K   I VIQGPKPGKPTDLSRMRQ+  KLKHN P HMKPK PSP
Sbjct: 212 IENRG--NKKKTATITVIQGPKPGKPTDLSRMRQVLTKLKHNPPTHMKPKLPSP 239

[Close]

BLAST of Lcy04g009020 vs. ExPASy Swiss-Prot
Match: Q9SKU1 (Clathrin light chain 1 OS=Arabidopsis thaliana OX=3702 GN=At2g20760 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.7e-48
Identity = 128/264 (48.48%), Postives = 155/264 (58.71%), Query Frame = 0


Query: 13  FDDDTIGFEPRLSSQRFESFSSFEADSAAGDSPPIFGNRPYKQGDDLPPTP--------P 72
           FDD     +    S+  E F  ++  S A   P    +  +   +  P +P         
Sbjct: 4   FDDGDFPAQTHSPSEH-EDFGGYDNFSEAQQPPTQHQSGGFSSFNGDPASPNGYGFGASS 63

Query: 73  SNFSAGGGFSSFSPEQNGKGFDGGFG-----ESDGPILSSPTAMEPEEGFPLREWRRLNA 132
            N      F S   + NG G  GG G      SDGPIL  P  M  EEGF  REWRRLN 
Sbjct: 64  PNHDFSSPFESSVNDANGNG--GGSGGDAIFASDGPILPDPNEMR-EEGFQRREWRRLNT 123

Query: 133 IRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNSKASNRDKEKQYLANREKFHAE 192
           I LEEKEK+EKE+  +II EA+ +K  FY +R   ++ +K  NR+KEK Y AN+EKFH E
Sbjct: 124 IHLEEKEKKEKEMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKEKLYWANQEKFHKE 183

Query: 193 AEKNYWKAIAELIPNEVPAIE-QRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLK 252
            +K+YWKAIAELIP EVP IE +RGKKD +KKP++ VIQGPKPGKPTDL RMRQI LKLK
Sbjct: 184 VDKHYWKAIAELIPREVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPTDLGRMRQIFLKLK 243

Query: 253 HNTPVHMKPKPSPPPPPESKTDPK 263
            N P HM P   PPPP +   D K
Sbjct: 244 TNPPPHMMP---PPPPAKDAKDGK 260

[Close]

BLAST of Lcy04g009020 vs. ExPASy Swiss-Prot
Match: Q5Z402 (Clathrin light chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0731800 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.7e-48
Identity = 139/295 (47.12%), Postives = 169/295 (57.29%), Query Frame = 0


Query: 7   TPPPPPFDDDTIGFEPRLSSQRFESFSSFEADSAAGDSPPIFGNRPYKQGDDLPPTP-PS 66
           +P   PFDDD              SF  F+A +A   +P           D  PP+P P 
Sbjct: 11  SPAASPFDDD--------------SFLRFDA-AAPAPAP----------ADAFPPSPEPY 70

Query: 67  NFSAGGGFSSFSPEQNGKGFDGGFGESD---GPILSSPTAMEPEEGFPLREWRRLNAIRL 126
            F          PE NG   D  F   D   GP+L  P  M  +EGF LREWRR NAI L
Sbjct: 71  AFRPDAPSPFGMPEANGSLHDDPFAAPDNDNGPVLPPPNQMGADEGFLLREWRRQNAILL 130

Query: 127 EEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNSKASNRDKEKQYLANREKFHAEAEK 186
           EEKEK+EKE+  +II +A ++K  F  +RKL ++ SK  NR++EK YLAN+EKFHA A+K
Sbjct: 131 EEKEKKEKEMRNQIILDAKEFKKAFVEKRKLNVETSKDQNREREKLYLANQEKFHAGADK 190

Query: 187 NYWKAIAELIPNEVPAIEQRG---KKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKH 246
            YWKAI+ELIP+E+  IE+RG    KDKEKKP IVVIQGPKPGKPTD+SRMRQI LKLKH
Sbjct: 191 QYWKAISELIPHEIANIEKRGAKKDKDKEKKPGIVVIQGPKPGKPTDMSRMRQILLKLKH 250

Query: 247 NTPVHMKPKPSPPPPPESKTDPKKDSSAAGATLTAGSGSATSKTAAVATSEGTTA 295
             P HMK    PPPPP + T     +   GA + A +    S   +V   E   A
Sbjct: 251 TPPPHMK----PPPPPAAATGKDGAAGKDGAKVAAAASKDASANGSVPEMEKAAA 276

[Close]

BLAST of Lcy04g009020 vs. ExPASy Swiss-Prot
Match: Q7XKE9 (Clathrin light chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0679100 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.3e-45
Identity = 129/294 (43.88%), Postives = 166/294 (56.46%), Query Frame = 0


Query: 13  FDDDTIGFEPRLSSQRFESFSSFEADS---AAGDSPPIFGNRPYKQGD------------ 72
           F DD     PR +S  F++      D+   AA D     G   +  G             
Sbjct: 5   FADDGADELPRTASHPFDADDDAAPDASGGAAADDTGYGGYASFVDGGVEDVEEEEEEIA 64

Query: 73  -DLPPTPPSNFSAGGGFSSFSPEQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRR 132
            +    P  + S G   S FSP+      DGG    DGPIL  P  M  EEG  LREWRR
Sbjct: 65  VESEGVPIGHVSGGFSPSPFSPDPE---LDGG----DGPILPPPAQMGAEEGILLREWRR 124

Query: 133 LNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNSKASNRDKEKQYLANREKF 192
            NAI LEEKE++EKEL  +I+ EA+++K  FY +R    + +K  NR++EK ++A +EKF
Sbjct: 125 QNAIVLEEKERKEKELRAQILAEAEEFKKAFYEKRIQNCETNKVHNREREKIFVAGQEKF 184

Query: 193 HAEAEKNYWKAIAELIPNEVPAIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLK 252
           HAEA+K YWK+I+ELIP+E+  IE+RGKKDK+KKP+I VIQGPKPGKPTDLSRMRQI +K
Sbjct: 185 HAEADKQYWKSISELIPHEIATIEKRGKKDKDKKPSITVIQGPKPGKPTDLSRMRQILVK 244

Query: 253 LKHNTPVHMKPKPSPPPPPESKTDPKKDSSAAGATLTAGSGSATSKTAAVATSE 291
           LKH  P HM   P      +   D  KD + A A  T     +  K A  + +E
Sbjct: 245 LKHAPPPHMMQPPPASAAKDGAKDGAKDGTPAPANGTKKPAESKEKPANGSPAE 291

[Close]

BLAST of Lcy04g009020 vs. ExPASy TrEMBL
Match: A0A5D3B8W6 (Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00900 PE=3 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 5.3e-130
Identity = 254/295 (86.10%), Postives = 274/295 (92.88%), Query Frame = 0


Query: 1   MSTFAGTPPPPPFDDDTIGFEPRLSSQRFESFSSFEADSAAGDSPPIFGNRPYKQGDDLP 60
           MSTFAGT  PPPF+D TIGFEPRL+SQRFE+FS+F+A+S A DS PIFGN PY  GDDLP
Sbjct: 1   MSTFAGT-SPPPFEDATIGFEPRLASQRFETFSTFQAES-ADDSSPIFGNLPYDLGDDLP 60

Query: 61  PTPPSNFSAGGGFSSFSPEQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI 120
           PTPP+NFSA GGFSSFS +QNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI
Sbjct: 61  PTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI 120

Query: 121 RLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNSKASNRDKEKQYLANREKFHAEA 180
           RLEEKEK+EKELL+EIIDEADQYKI+FYRRRKLALD+SKA+NRDKEKQYLAN+EKFHAEA
Sbjct: 121 RLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEA 180

Query: 181 EKNYWKAIAELIPNEVPAIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHN 240
           +KNYWKAIAELIPNEVP IEQRGKKDKEKKPAI+VIQGPKPGKPTDLSRMRQIHLKLKHN
Sbjct: 181 DKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHN 240

Query: 241 TPVHMKPKPSPPPPPESKTDPKKDSSAAGATLTAGSGSATSKTAAVATSEGTTAG 296
           TP+HMKPK   PPP E K++ KKDSSAAGATLTAGSG A S+TAAVATSEGTT G
Sbjct: 241 TPLHMKPK---PPPAEPKSESKKDSSAAGATLTAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of Lcy04g009020 vs. ExPASy TrEMBL
Match: A0A5A7TPG9 (Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G00190 PE=3 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 4.5e-129
Identity = 252/295 (85.42%), Postives = 273/295 (92.54%), Query Frame = 0


Query: 1   MSTFAGTPPPPPFDDDTIGFEPRLSSQRFESFSSFEADSAAGDSPPIFGNRPYKQGDDLP 60
           MSTFAGT  PPPF+D TIGF+PRL+SQRFE+FS+F+A+S A DS PIFGN PY  GDDLP
Sbjct: 1   MSTFAGT-SPPPFEDATIGFDPRLASQRFETFSTFQAES-ADDSSPIFGNLPYDLGDDLP 60

Query: 61  PTPPSNFSAGGGFSSFSPEQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI 120
           PTPP+NFSA GGFSSFS +QNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI
Sbjct: 61  PTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI 120

Query: 121 RLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNSKASNRDKEKQYLANREKFHAEA 180
           RLEEKEK+EKELL+EIIDEADQYKI+FYRRRKLALD+SKA+NRDKEKQYLAN+EKFHAEA
Sbjct: 121 RLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEA 180

Query: 181 EKNYWKAIAELIPNEVPAIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHN 240
           +KNYWKAIAELIPNEVP IEQRGKKDKEKKPAI+VIQGPKPGKPTDLSRMRQIHLKLKHN
Sbjct: 181 DKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHN 240

Query: 241 TPVHMKPKPSPPPPPESKTDPKKDSSAAGATLTAGSGSATSKTAAVATSEGTTAG 296
           TP+HMKPK   PPP E K++ KKDSSAAGATL AGSG A S+TAAVATSEGTT G
Sbjct: 241 TPLHMKPK---PPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of Lcy04g009020 vs. ExPASy TrEMBL
Match: A0A1S3BLP9 (Clathrin light chain OS=Cucumis melo OX=3656 GN=LOC103491206 PE=3 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 4.5e-129
Identity = 252/295 (85.42%), Postives = 273/295 (92.54%), Query Frame = 0


Query: 1   MSTFAGTPPPPPFDDDTIGFEPRLSSQRFESFSSFEADSAAGDSPPIFGNRPYKQGDDLP 60
           MSTFAGT  PPPF+D TIGF+PRL+SQRFE+FS+F+A+S A DS PIFGN PY  GDDLP
Sbjct: 1   MSTFAGT-SPPPFEDATIGFDPRLASQRFETFSTFQAES-ADDSSPIFGNLPYDLGDDLP 60

Query: 61  PTPPSNFSAGGGFSSFSPEQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI 120
           PTPP+NFSA GGFSSFS +QNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI
Sbjct: 61  PTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI 120

Query: 121 RLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNSKASNRDKEKQYLANREKFHAEA 180
           RLEEKEK+EKELL+EIIDEADQYKI+FYRRRKLALD+SKA+NRDKEKQYLAN+EKFHAEA
Sbjct: 121 RLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEA 180

Query: 181 EKNYWKAIAELIPNEVPAIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHN 240
           +KNYWKAIAELIPNEVP IEQRGKKDKEKKPAI+VIQGPKPGKPTDLSRMRQIHLKLKHN
Sbjct: 181 DKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHN 240

Query: 241 TPVHMKPKPSPPPPPESKTDPKKDSSAAGATLTAGSGSATSKTAAVATSEGTTAG 296
           TP+HMKPK   PPP E K++ KKDSSAAGATL AGSG A S+TAAVATSEGTT G
Sbjct: 241 TPLHMKPK---PPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of Lcy04g009020 vs. ExPASy TrEMBL
Match: A0A0A0KZX1 (Clathrin light chain OS=Cucumis sativus OX=3659 GN=Csa_4G308590 PE=3 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 7.6e-129
Identity = 254/295 (86.10%), Postives = 270/295 (91.53%), Query Frame = 0


Query: 1   MSTFAGTPPPPPFDDDTIGFEPRLSSQRFESFSSFEADSAAGDSPPIFGNRPYKQGDDLP 60
           MSTFAGT PP PFDD T GFEPRL+SQRFE+FS+FEA+S A DS PIFGN PY QGD + 
Sbjct: 1   MSTFAGT-PPSPFDDATNGFEPRLASQRFETFSTFEAES-ADDSSPIFGNLPYDQGDGVE 60

Query: 61  PTPPSNFSAGGGFSSFSPEQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI 120
           PTPP+NFSAGGGFSSFS +QNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI
Sbjct: 61  PTPPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI 120

Query: 121 RLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNSKASNRDKEKQYLANREKFHAEA 180
           RLEEKEKRE ELL+EIIDEADQYKI+FYRRRKLALD+SKA+NRDKEKQYLAN+EKFHAEA
Sbjct: 121 RLEEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEA 180

Query: 181 EKNYWKAIAELIPNEVPAIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHN 240
           +KNYWKAIAELIPNEVP IEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHN
Sbjct: 181 DKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHN 240

Query: 241 TPVHMKPKPSPPPPPESKTDPKKDSSAAGATLTAGSGSATSKTAAVATSEGTTAG 296
           TP+HMKPK   PPP E K + KKDSSAAGATL AGSGSA S+TAAVATSEG T G
Sbjct: 241 TPLHMKPK---PPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG 290

[Close]

BLAST of Lcy04g009020 vs. ExPASy TrEMBL
Match: A0A6J1DDM4 (Clathrin light chain OS=Momordica charantia OX=3673 GN=LOC111019409 PE=3 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 7.7e-121
Identity = 249/309 (80.58%), Postives = 265/309 (85.76%), Query Frame = 0


Query: 1   MSTFAGTPPPPPFDDDTIGFEPRLSSQRFESFSSFEADS---AAGDSPPIFGNRPYKQGD 60
           MSTFAG   PPPFDD T G++PRLSSQRFESFS+FEA+S   +AGDS PIFG+R   QGD
Sbjct: 1   MSTFAGA--PPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGD 60

Query: 61  DL--------PPTPPSNFSAGGGFSSFSPEQNGKGFDGGFGESDGPILSSPTAMEPEEGF 120
           DL         P+PPSNFS  GGFS+FSPEQNGKGFDGGF ES+GPILSSP  MEPEEGF
Sbjct: 61  DLLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGF 120

Query: 121 PLREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNSKASNRDKEKQY 180
           PLREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDN+KASNRDKEKQY
Sbjct: 121 PLREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQY 180

Query: 181 LANREKFHAEAEKNYWKAIAELIPNEVPAIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSR 240
           LANREKFHAEA+KNYWKAIAELIPNEVP IEQ+GKKDKEKKPAIVVIQGPKPGKPTDLSR
Sbjct: 181 LANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSR 240

Query: 241 MRQIHLKLKHNTPVHMKPKPSPPPPPESKTDPKKDSS----AAGATLTAGSG---SATSK 292
           MRQIHLKLK NTP+HM+PK  PPP  ESKTDPK+DSS    AAGA+ T GSG   SAT K
Sbjct: 241 MRQIHLKLKRNTPLHMRPK--PPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSATPK 300

[Close]

BLAST of Lcy04g009020 vs. NCBI nr
Match: XP_038882671.1 (clathrin light chain 2-like [Benincasa hispida] >XP_038882672.1 clathrin light chain 2-like [Benincasa hispida])

HSP 1 Score: 475.3 bits (1222), Expect = 3.8e-130
Identity = 255/298 (85.57%), Postives = 271/298 (90.94%), Query Frame = 0


Query: 1   MSTFAGTPPPPPFDDDTIGFEPRLSSQRFESFSSFEADSA---AGDSPPIFGNRPYKQGD 60
           MSTFAGT PPP FDD TIGFEPRL+SQRFE+FS+FE +SA   AGDS PIFGN  Y QGD
Sbjct: 1   MSTFAGT-PPPSFDDGTIGFEPRLASQRFETFSTFETESAADSAGDSSPIFGNMAYNQGD 60

Query: 61  DLPPTPPSNFSAGGGFSSFSPEQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRL 120
           DL PTPP+NFSA GGFSSFSP+QNGKGFDGG+GESDGPILSSPTAMEPEEGFPLREWRRL
Sbjct: 61  DLSPTPPTNFSADGGFSSFSPQQNGKGFDGGYGESDGPILSSPTAMEPEEGFPLREWRRL 120

Query: 121 NAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNSKASNRDKEKQYLANREKFH 180
           NAIRLEEK KREKELL+EIIDEADQYKI+FYRRRKLALDN+K SNRDKEKQYLAN+EKFH
Sbjct: 121 NAIRLEEKLKREKELLEEIIDEADQYKIEFYRRRKLALDNTKTSNRDKEKQYLANQEKFH 180

Query: 181 AEAEKNYWKAIAELIPNEVPAIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKL 240
           AEA+KNYWKAIAELIPNEVP IEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQI LKL
Sbjct: 181 AEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIQLKL 240

Query: 241 KHNTPVHMKPKPSPPPPPESKTDPKKDSSAAGATLTAGSGSATSKTAAVATSEGTTAG 296
           KHNTP+HMKPK  PPPP E K++ KKDSSAAG T  AGSG ATS+TAAVATSEGTT G
Sbjct: 241 KHNTPLHMKPKQPPPPPVEPKSESKKDSSAAGMTSAAGSGLATSRTAAVATSEGTTFG 297

[Close]

BLAST of Lcy04g009020 vs. NCBI nr
Match: TYJ96292.1 (clathrin light chain 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 473.8 bits (1218), Expect = 1.1e-129
Identity = 254/295 (86.10%), Postives = 274/295 (92.88%), Query Frame = 0


Query: 1   MSTFAGTPPPPPFDDDTIGFEPRLSSQRFESFSSFEADSAAGDSPPIFGNRPYKQGDDLP 60
           MSTFAGT  PPPF+D TIGFEPRL+SQRFE+FS+F+A+S A DS PIFGN PY  GDDLP
Sbjct: 1   MSTFAGT-SPPPFEDATIGFEPRLASQRFETFSTFQAES-ADDSSPIFGNLPYDLGDDLP 60

Query: 61  PTPPSNFSAGGGFSSFSPEQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI 120
           PTPP+NFSA GGFSSFS +QNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI
Sbjct: 61  PTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI 120

Query: 121 RLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNSKASNRDKEKQYLANREKFHAEA 180
           RLEEKEK+EKELL+EIIDEADQYKI+FYRRRKLALD+SKA+NRDKEKQYLAN+EKFHAEA
Sbjct: 121 RLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEA 180

Query: 181 EKNYWKAIAELIPNEVPAIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHN 240
           +KNYWKAIAELIPNEVP IEQRGKKDKEKKPAI+VIQGPKPGKPTDLSRMRQIHLKLKHN
Sbjct: 181 DKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHN 240

Query: 241 TPVHMKPKPSPPPPPESKTDPKKDSSAAGATLTAGSGSATSKTAAVATSEGTTAG 296
           TP+HMKPK   PPP E K++ KKDSSAAGATLTAGSG A S+TAAVATSEGTT G
Sbjct: 241 TPLHMKPK---PPPAEPKSESKKDSSAAGATLTAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of Lcy04g009020 vs. NCBI nr
Match: XP_008449287.1 (PREDICTED: clathrin light chain 2-like [Cucumis melo] >KAA0045034.1 clathrin light chain 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 470.7 bits (1210), Expect = 9.3e-129
Identity = 252/295 (85.42%), Postives = 273/295 (92.54%), Query Frame = 0


Query: 1   MSTFAGTPPPPPFDDDTIGFEPRLSSQRFESFSSFEADSAAGDSPPIFGNRPYKQGDDLP 60
           MSTFAGT  PPPF+D TIGF+PRL+SQRFE+FS+F+A+S A DS PIFGN PY  GDDLP
Sbjct: 1   MSTFAGT-SPPPFEDATIGFDPRLASQRFETFSTFQAES-ADDSSPIFGNLPYDLGDDLP 60

Query: 61  PTPPSNFSAGGGFSSFSPEQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI 120
           PTPP+NFSA GGFSSFS +QNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI
Sbjct: 61  PTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI 120

Query: 121 RLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNSKASNRDKEKQYLANREKFHAEA 180
           RLEEKEK+EKELL+EIIDEADQYKI+FYRRRKLALD+SKA+NRDKEKQYLAN+EKFHAEA
Sbjct: 121 RLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEA 180

Query: 181 EKNYWKAIAELIPNEVPAIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHN 240
           +KNYWKAIAELIPNEVP IEQRGKKDKEKKPAI+VIQGPKPGKPTDLSRMRQIHLKLKHN
Sbjct: 181 DKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRMRQIHLKLKHN 240

Query: 241 TPVHMKPKPSPPPPPESKTDPKKDSSAAGATLTAGSGSATSKTAAVATSEGTTAG 296
           TP+HMKPK   PPP E K++ KKDSSAAGATL AGSG A S+TAAVATSEGTT G
Sbjct: 241 TPLHMKPK---PPPAEPKSESKKDSSAAGATLAAGSGLAASRTAAVATSEGTTVG 290

[Close]

BLAST of Lcy04g009020 vs. NCBI nr
Match: XP_004147885.1 (clathrin light chain 2 [Cucumis sativus] >KGN54369.1 hypothetical protein Csa_018069 [Cucumis sativus])

HSP 1 Score: 469.9 bits (1208), Expect = 1.6e-128
Identity = 254/295 (86.10%), Postives = 270/295 (91.53%), Query Frame = 0


Query: 1   MSTFAGTPPPPPFDDDTIGFEPRLSSQRFESFSSFEADSAAGDSPPIFGNRPYKQGDDLP 60
           MSTFAGT PP PFDD T GFEPRL+SQRFE+FS+FEA+S A DS PIFGN PY QGD + 
Sbjct: 1   MSTFAGT-PPSPFDDATNGFEPRLASQRFETFSTFEAES-ADDSSPIFGNLPYDQGDGVE 60

Query: 61  PTPPSNFSAGGGFSSFSPEQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI 120
           PTPP+NFSAGGGFSSFS +QNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI
Sbjct: 61  PTPPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAI 120

Query: 121 RLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNSKASNRDKEKQYLANREKFHAEA 180
           RLEEKEKRE ELL+EIIDEADQYKI+FYRRRKLALD+SKA+NRDKEKQYLAN+EKFHAEA
Sbjct: 121 RLEEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEA 180

Query: 181 EKNYWKAIAELIPNEVPAIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHN 240
           +KNYWKAIAELIPNEVP IEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHN
Sbjct: 181 DKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHN 240

Query: 241 TPVHMKPKPSPPPPPESKTDPKKDSSAAGATLTAGSGSATSKTAAVATSEGTTAG 296
           TP+HMKPK   PPP E K + KKDSSAAGATL AGSGSA S+TAAVATSEG T G
Sbjct: 241 TPLHMKPK---PPPAEPKAESKKDSSAAGATLAAGSGSAASRTAAVATSEGRTVG 290

[Close]

BLAST of Lcy04g009020 vs. NCBI nr
Match: XP_022151477.1 (clathrin light chain 2-like [Momordica charantia])

HSP 1 Score: 443.4 bits (1139), Expect = 1.6e-120
Identity = 249/309 (80.58%), Postives = 265/309 (85.76%), Query Frame = 0


Query: 1   MSTFAGTPPPPPFDDDTIGFEPRLSSQRFESFSSFEADS---AAGDSPPIFGNRPYKQGD 60
           MSTFAG   PPPFDD T G++PRLSSQRFESFS+FEA+S   +AGDS PIFG+R   QGD
Sbjct: 1   MSTFAGA--PPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGD 60

Query: 61  DL--------PPTPPSNFSAGGGFSSFSPEQNGKGFDGGFGESDGPILSSPTAMEPEEGF 120
           DL         P+PPSNFS  GGFS+FSPEQNGKGFDGGF ES+GPILSSP  MEPEEGF
Sbjct: 61  DLLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGF 120

Query: 121 PLREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNSKASNRDKEKQY 180
           PLREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDN+KASNRDKEKQY
Sbjct: 121 PLREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQY 180

Query: 181 LANREKFHAEAEKNYWKAIAELIPNEVPAIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSR 240
           LANREKFHAEA+KNYWKAIAELIPNEVP IEQ+GKKDKEKKPAIVVIQGPKPGKPTDLSR
Sbjct: 181 LANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSR 240

Query: 241 MRQIHLKLKHNTPVHMKPKPSPPPPPESKTDPKKDSS----AAGATLTAGSG---SATSK 292
           MRQIHLKLK NTP+HM+PK  PPP  ESKTDPK+DSS    AAGA+ T GSG   SAT K
Sbjct: 241 MRQIHLKLKRNTPLHMRPK--PPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSATPK 300

[Close]

BLAST of Lcy04g009020 vs. TAIR 10
Match: AT2G40060.1 (Clathrin light chain protein )

HSP 1 Score: 216.9 bits (551), Expect = 2.2e-56
Identity = 128/236 (54.24%), Postives = 164/236 (69.49%), Query Frame = 0


Query: 30  ESFSSFEADSAAGDSPPIFGNRPYKQGDDLPPTPPSNFSAGGGFSSFSPEQNGKGFDGGF 89
           +SFS+F+      DS            DD+   P S++ A           NG G  G  
Sbjct: 30  DSFSAFDGSLQVEDSV-----------DDVFAAPSSDYGA---------YSNGDGIFGSN 89

Query: 90  GESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYR 149
           G+ DGPIL  P+ ME +EGF LREWRR NAI+LEEKEKREKELL++II+EADQYK +F++
Sbjct: 90  GDHDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKELLKQIIEEADQYKEEFHK 149

Query: 150 RRKLALDNSKASNRDKEKQYLANREKFHAEAEKNYWKAIAELIPNEVPAIE-QRGKKDKE 209
           + ++  +N+KA+NR+KEK YL N+EKF+AE+ KNYWKAIAEL+P EVP IE +RGKK+++
Sbjct: 150 KIEVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAELVPKEVPTIEKRRGKKEQQ 209

Query: 210 --KKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPVHMKPKPSPPPPPESKTDPK 263
             KKP + VIQGPKPGKPTDL+RMRQI +KLKHN P H+K   S PP  E+   PK
Sbjct: 210 DPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNPPSHLK-LTSQPPSEEAAAPPK 244

[Close]

BLAST of Lcy04g009020 vs. TAIR 10
Match: AT3G51890.1 (Clathrin light chain protein )

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-54
Identity = 128/234 (54.70%), Postives = 158/234 (67.52%), Query Frame = 0


Query: 20  FEPRLSSQRFE-SFSSFEADSAAGDSPPIFGNRPYKQGDDLPPTPPSNFSAGGGFSSFSP 79
           +E R  SQRF+ SFS+F       DS P       ++  DLP           G SS  P
Sbjct: 32  YESRFQSQRFDSSFSNF-------DSQP-------EKESDLP----------CGDSSPRP 91

Query: 80  EQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREKELLQEIID 139
           E         F +++  IL  P+AME EEGF LREWRRLNA+RLEEKEK EKE++Q+I++
Sbjct: 92  ETQSPPSINSFDDTNDSILPPPSAMEKEEGFALREWRRLNALRLEEKEKEEKEMVQQILE 151

Query: 140 EADQYKIDFYRRRKLALDNSKASNRDKEKQYLANREKFHAEAEKNYWKAIAELIPNEVPA 199
            A+QYK +FY +R + ++N+K  NR+KEK +L N+EKF+AEA+KN WKAIAELIP EVP 
Sbjct: 152 AAEQYKAEFYSKRNVTIENNKKLNREKEKFFLENQEKFYAEADKNNWKAIAELIPREVPV 211

Query: 200 IEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPVHMKPK-PSP 252
           IE RG  +K+K   I VIQGPKPGKPTDLSRMRQ+  KLKHN P HMKPK PSP
Sbjct: 212 IENRG--NKKKTATITVIQGPKPGKPTDLSRMRQVLTKLKHNPPTHMKPKLPSP 239

[Close]

BLAST of Lcy04g009020 vs. TAIR 10
Match: AT2G20760.1 (Clathrin light chain protein )

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-49
Identity = 128/264 (48.48%), Postives = 155/264 (58.71%), Query Frame = 0


Query: 13  FDDDTIGFEPRLSSQRFESFSSFEADSAAGDSPPIFGNRPYKQGDDLPPTP--------P 72
           FDD     +    S+  E F  ++  S A   P    +  +   +  P +P         
Sbjct: 4   FDDGDFPAQTHSPSEH-EDFGGYDNFSEAQQPPTQHQSGGFSSFNGDPASPNGYGFGASS 63

Query: 73  SNFSAGGGFSSFSPEQNGKGFDGGFG-----ESDGPILSSPTAMEPEEGFPLREWRRLNA 132
            N      F S   + NG G  GG G      SDGPIL  P  M  EEGF  REWRRLN 
Sbjct: 64  PNHDFSSPFESSVNDANGNG--GGSGGDAIFASDGPILPDPNEMR-EEGFQRREWRRLNT 123

Query: 133 IRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNSKASNRDKEKQYLANREKFHAE 192
           I LEEKEK+EKE+  +II EA+ +K  FY +R   ++ +K  NR+KEK Y AN+EKFH E
Sbjct: 124 IHLEEKEKKEKEMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKEKLYWANQEKFHKE 183

Query: 193 AEKNYWKAIAELIPNEVPAIE-QRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLK 252
            +K+YWKAIAELIP EVP IE +RGKKD +KKP++ VIQGPKPGKPTDL RMRQI LKLK
Sbjct: 184 VDKHYWKAIAELIPREVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPTDLGRMRQIFLKLK 243

Query: 253 HNTPVHMKPKPSPPPPPESKTDPK 263
            N P HM P   PPPP +   D K
Sbjct: 244 TNPPPHMMP---PPPPAKDAKDGK 260

The following BLAST results are available for this feature:

BLAST of Lcy04g009020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04209	3.2e-55	54.24	Clathrin light chain 2 OS=Arabidopsis thaliana OX=3702 GN=CLC2 PE=1 SV=1	[more]
F4J5M9	2.3e-53	54.70	Clathrin light chain 3 OS=Arabidopsis thaliana OX=3702 GN=At3g51890 PE=1 SV=1	[more]
Q9SKU1	1.7e-48	48.48	Clathrin light chain 1 OS=Arabidopsis thaliana OX=3702 GN=At2g20760 PE=2 SV=1	[more]
Q5Z402	3.7e-48	47.12	Clathrin light chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0731800 ...	[more]
Q7XKE9	2.3e-45	43.88	Clathrin light chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0679100 ...	[more]

BLAST of Lcy04g009020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3B8W6	5.3e-130	86.10	Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold782...	[more]
A0A5A7TPG9	4.5e-129	85.42	Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G...	[more]
A0A1S3BLP9	4.5e-129	85.42	Clathrin light chain OS=Cucumis melo OX=3656 GN=LOC103491206 PE=3 SV=1	[more]
A0A0A0KZX1	7.6e-129	86.10	Clathrin light chain OS=Cucumis sativus OX=3659 GN=Csa_4G308590 PE=3 SV=1	[more]
A0A6J1DDM4	7.7e-121	80.58	Clathrin light chain OS=Momordica charantia OX=3673 GN=LOC111019409 PE=3 SV=1	[more]

BLAST of Lcy04g009020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882671.1	3.8e-130	85.57	clathrin light chain 2-like [Benincasa hispida] >XP_038882672.1 clathrin light c...	[more]
TYJ96292.1	1.1e-129	86.10	clathrin light chain 2-like [Cucumis melo var. makuwa]	[more]
XP_008449287.1	9.3e-129	85.42	PREDICTED: clathrin light chain 2-like [Cucumis melo] >KAA0045034.1 clathrin lig...	[more]
XP_004147885.1	1.6e-128	86.10	clathrin light chain 2 [Cucumis sativus] >KGN54369.1 hypothetical protein Csa_01...	[more]
XP_022151477.1	1.6e-120	80.58	clathrin light chain 2-like [Momordica charantia]	[more]

BLAST of Lcy04g009020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40060.1	2.2e-56	54.24	Clathrin light chain protein	[more]
AT3G51890.1	1.6e-54	54.70	Clathrin light chain protein	[more]
AT2G20760.1	1.2e-49	48.48	Clathrin light chain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 119..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..295
None	No IPR available	PANTHER	PTHR10639:SF24	CLATHRIN LIGHT CHAIN 3	coord: 12..284
IPR000996	Clathrin light chain	PFAM	PF01086	Clathrin_lg_ch	coord: 100..209 e-value: 7.3E-11 score: 42.5
IPR000996	Clathrin light chain	PANTHER	PTHR10639	CLATHRIN LIGHT CHAIN	coord: 12..284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g009020.1	Lcy04g009020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048268	clathrin coat assembly
biological_process	GO:0072583	clathrin-dependent endocytosis
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030132	clathrin coat of coated pit
cellular_component	GO:0030130	clathrin coat of trans-Golgi network vesicle
molecular_function	GO:0032050	clathrin heavy chain binding
molecular_function	GO:0005198	structural molecule activity