Lcy04g008850 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g008850
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	protein SCO1 homolog 1, mitochondrial
Location	Chr04: 39996892 .. 40000820 (-)
RNA-Seq Expression	Lcy04g008850
Synteny	Lcy04g008850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCGGCCCATAGAAAGCCCATTAAGCCTGGCCCACGGTCTTGGTTAAATCTCGCTCCAATTGCAAAGTCGGGTCGAAAAGTTCTACCTATAAATAGATCGCCGTCTTCCCTCCAAATTCCGGCAGCGAGGGTTTGCGAAGGACATTTCCACATTTCAGGGTTTTACGAGAGTTTACAGTTGACAATGGCGACCATTATTTCTAGGAGTGCGAAGCATTTTCATTACGCAAATCGCTGTCTCTCTTTACACCGGCTGAGGCTGCATCCTTCGTCTTCGTCTTCCGTTCTAGCGGGCGCGAATCTTCACGATCGAGCTCTTCCCCTTCTTCAGTCGGTTGGTTTCCTTATCGATTTTGAATGACTGGTTTTTGCTTTGGGAAATTAGTTGTTAGGAGTTGTGCATAAGTTTAAAATTCAGTTTCAGTGAAATTTATACGACATTCATGATTAATCGCTTCGATCAGTAAGTTAGTGAAAGATCGTAGATTATACGCTACCTTATTTTGTAGCCGAGAAGGTTTCGTTTAATGATAGGGAAGAAACAATGGGTAAATTGTTTATAGTATTCCTGGTGCGATGATACTATGATTTACTTTTCTTTGTTTTTCTTTTGAATTCTCACTTGACAACGTCGGTTGGGGTTATACTATGTGAATTGTGCTTAGCATTCCTGTTTACGAGTATTTTTTCTTTTCATTAGAGTTACTTCTTCTTTCTTAGGGGCTTGGAATCAACCATTTAGCTATGTATATGAGGCGGCTGTATGGTACAACTTCTACTACTGTTGATTCTCAAAGCCCAGCCTCGGAGAGATCGGCAGAGTCCAATTCTAGTGAAGGGGATAAATCGGGGAAATCAAATCAGAGCCAGGATGCTGGAAAACCTGTTCGTGGTGGGGTATGGCTGCCTTTAGCTGTACTATTGGGCTTTCTATATACATTTATCGTTTTTTTCTTGAGATTTGAACGTATCGAGCTGATTGATTTACTCTCTACAGCCGGTTTCATGGTTGAGTTTTCTTTTGCTGGTTGCCACTGGAGCGGGATTGGTTTTCTATTACGACAGGGAAAAGAAACGTCATATTGAAGGTAGACTACTATGGTGAGTGCCTGAGTGGAATAAATGTTCTTCCCCACATTTTCTAAGCGAAGAAAATCTTCCAAGTAATGTCTATTCGAAGAGCTCTCTTTGAGCAAGCAGAATTTAGGGGTTTGCGCCTTTATATCTTGTATATTGATTTGTTGTCAAATCATAACATGATTTATAGGTATATATGGTATAGATATTTTAATTAACTTTTCCTTCCAATACATACACGGCTCTATTTAGTGTTTCCTACCTAGGTGCTTCTCGTGATTTTGTACTGTTGCTGTTGGAGGCTAACTACTGTATAGATACCTCATTTATCCCTCCGGTCCGCTCCATTGTTAGTGTGTACTTGTCTTCCGTTAGTTTAATAATATCTGGGATGTGGATGGATGTTGCTTTTAATTGGTATATATGTAACAATCTTGTCCAGTCCATCTTGTCAGGCCATCTTACAGGCTTTAAAACCTTTAATTTTGATATTTGAGTAAATCAAGATCACGTTTAGCTTTTAATGGAGTTGGTTGTGGTGGTCTACTGGTACAAGTTAAGGTGCTCGTTCGAATGTCACTTGACTCTTATTGCTTACATCTTTGCTCGTGCTCTGTTTAACTGCTGTTTTAAATATTTAGCCGTATGAAGTGAGACACATGACTTGGCGAGTCTCTTTTTTATCTTGCTGTATCCATTTGTGTAGTATTTAGTTTCATCATGGTACATTTCCAGCTTCATAATGGGATATATTGTCTACTGTGTAGCTTTGAGTGCATTCTTTTTAGTCGTTTTACCATTTATTTTTGGCAACTGGAAACTATTTTGCTATAATGGTTACTGTAAAATTTAACATATAGGAAGACATTAGGGAGAGGCATGGCTTGTTTTTAGCAGTTAGGGCATAACATTTTTTTTTAGTTTGCTGATGTTTGAGTTTATTTCAAATATTTTCCTTTAAAATTGCGTGCATGATTAAATTGTTCTTCTTTCGATTAACAGAAATAAACAAGGCTTCCATAGAAGTCAAACAAGGACCATCTGTAGGAAAAGCAGCTATTGGGGGCCCATTTAAACTTGTCAATCATGATGGGAAGCAGGTCACAGAAAAAGACTTTTTTGGGAAATGGACATTGATATATTTTGGCTTCACTCACTGTCCAGATATCTGCCCAGACGAGCTTCAGAAGCTAGCTGCTGCAGTTGATAAAATCAGTTAGTCATTTGCTCTTTCACACACTTGTTGGTGCTTGTTTGCGGGACTAGTTTAAAAATAGTCTTCTGTCTTTCAAAGTAAAACTCAGAGAATATAAGTTCGAGTACATTTTTCTGAAAGATTTACTTTCATTTGCTTTCCTTTAGTTTATTCTCCCAGGTGTCATGTCTTTTAGAATCCAAAATTATGGACATGTAAATAGCAATCTCACAATCTATTCACATTATTTGATTTCTGTTCTCAATAACAGTTTTGGAAACAGGAAACTGTTTTGGAACAATCTTCCAAAAAATCCTTGGTTTTCATTTTGATATTGACAAAATATAATGATGGCACACATGAAAAGTTCTTAATGTAGTTTATTGGGACATCTTCTAAATGACTTTATTTTATTGAGTTAATTTTATGGTGTTATGTTCTAATAAGTTGTGACAAAGATGGTGGCTTTTAATATTCAGGACTGCTGCTGATCATTTGATATATTTCTTTCATGAGCAAAAGTTTTTTCCAATCGAAGCTATTTGCTGAATCCTTAATGTTCCCAACAGTACCTGATTGTTTATCATTATCTTTTTTCCTACATTTTTACAAATTTGCTGTGACAATTTTTTGCTGAACTTTCTATATTTGTTATTACATTTATCCACGGCTAATTATGTTTGTTTATAACTTCATCTTTTTTTCTGTTGGAAGCAGAAAAGGCAGGAATTAAAATTTTGCCTATCTTCATCTCTGTTGATCCTGAGAGAGATACGGTAGAACAAGTGCGGGAATATGTCAAAGGTATGTAGGAATCAGTTTTCCATCTGTTTATCGTACTTATTAGACATACCAAATTAATATAATTGTTTCCCTAATGTTGCAGAATTCCATCCAGACTTGGTTGGGTTAACTGGGACTTCGGATGAGGTACGGAATGTAGCTCGGGCATATCGAGTTTATTATATGAAGACTGAAGAGGAAGACTCGGATTATCTTGTTGATCACTCCATAGTGATGTAAGTATGAGTTTTAATTCGCTTGTCATCAGTCTCACACGATAGTTTTTTTCACAATCTGGTGGGAAATTTGTTGCAGGTACTTAATGGGTCCTGAGAAGATGGAATTTGTAAAATTTTTTGGGAAAAACAACGACGTTGATTCACTTGCAGATGGTGTAATCAAAGAGATAAAGCAGTACAAGAAATAGAAAGTTTTTTATCAACCAAGTTCCATTATACTACTTCAACCTGGTCAGTTGGTTTTCGAAGTTATCATTTTTTTTCATCGAGTATTTTCATTGCTTGGCATTCACGGCGGGTTGGCTCCTATAATAGGCTTGTCTTAGTTAATAATATTGTTTTTTCTTGGTTGCCCTTTTTCTTCGCCAAGCATTTCTATAACATTAATCCAACTTATTTAGAGAATTGGAGAATTGGCCATTGCTACGACCTTAGACCTTGTGTTGGTTGAGCAACTGTATCCTTGAGTTCGAAGAATTGGCCATTGGTACAGTATGCTGTTCATCTTAGCTATTTAATTCCCCCTTTTTACATGTTATATATGTCTCAGTTCTCCTTCCAACTCGTATTTAGTTACATGTATGAAAAATTGTCTTTACGAACTTATAAAAATAAATAATTTGCCTTTAC

mRNA sequence

ATGGATCCGGCCCATAGAAAGCCCATTAAGCCTGGCCCACGGTCTTGGTTAAATCTCGCTCCAATTGCAAAGTCGGGTCGAAAAGTTCTACCTATAAATAGATCGCCGTCTTCCCTCCAAATTCCGGCAGCGAGGGTTTGCGAAGGACATTTCCACATTTCAGGGTTTTACGAGAGTTTACAGTTGACAATGGCGACCATTATTTCTAGGAGTGCGAAGCATTTTCATTACGCAAATCGCTGTCTCTCTTTACACCGGCTGAGGCTGCATCCTTCGTCTTCGTCTTCCGTTCTAGCGGGCGCGAATCTTCACGATCGAGCTCTTCCCCTTCTTCAGTCGGGGCTTGGAATCAACCATTTAGCTATGTATATGAGGCGGCTGTATGGTACAACTTCTACTACTGTTGATTCTCAAAGCCCAGCCTCGGAGAGATCGGCAGAGTCCAATTCTAGTGAAGGGGATAAATCGGGGAAATCAAATCAGAGCCAGGATGCTGGAAAACCTGTTCGTGGTGGGCCGGTTTCATGGTTGAGTTTTCTTTTGCTGGTTGCCACTGGAGCGGGATTGGTTTTCTATTACGACAGGGAAAAGAAACGTCATATTGAAGAAATAAACAAGGCTTCCATAGAAGTCAAACAAGGACCATCTGTAGGAAAAGCAGCTATTGGGGGCCCATTTAAACTTGTCAATCATGATGGGAAGCAGGTCACAGAAAAAGACTTTTTTGGGAAATGGACATTGATATATTTTGGCTTCACTCACTGTCCAGATATCTGCCCAGACGAGCTTCAGAAGCTAGCTGCTGCAGTTGATAAAATCAAAAAGGCAGGAATTAAAATTTTGCCTATCTTCATCTCTGTTGATCCTGAGAGAGATACGGTAGAACAAGTGCGGGAATATGTCAAAGAATTCCATCCAGACTTGGTTGGGTTAACTGGGACTTCGGATGAGGTACGGAATGTAGCTCGGGCATATCGAGTTTATTATATGAAGACTGAAGAGGAAGACTCGGATTATCTTGTTGATCACTCCATAGTGATGTACTTAATGGGTCCTGAGAAGATGGAATTTGTAAAATTTTTTGGGAAAAACAACGACGTTGATTCACTTGCAGATGGTGTAATCAAAGAGATAAAGCAGTACAAGAAATAGAAAGTTTTTTATCAACCAAGTTCCATTATACTACTTCAACCTGGTCAGTTGGTTTTCGAAGTTATCATTTTTTTTCATCGAGTATTTTCATTGCTTGGCATTCACGGCGGGTTGGCTCCTATAATAGGCTTGTCTTAGTTAATAATATTGTTTTTTCTTGGTTGCCCTTTTTCTTCGCCAAGCATTTCTATAACATTAATCCAACTTATTTAGAGAATTGGAGAATTGGCCATTGCTACGACCTTAGACCTTGTGTTGGTTGAGCAACTGTATCCTTGAGTTCGAAGAATTGGCCATTGGTACAGTATGCTGTTCATCTTAGCTATTTAATTCCCCCTTTTTACATGTTATATATGTCTCAGTTCTCCTTCCAACTCGTATTTAGTTACATGTATGAAAAATTGTCTTTACGAACTTATAAAAATAAATAATTTGCCTTTAC

Coding sequence (CDS)

ATGGATCCGGCCCATAGAAAGCCCATTAAGCCTGGCCCACGGTCTTGGTTAAATCTCGCTCCAATTGCAAAGTCGGGTCGAAAAGTTCTACCTATAAATAGATCGCCGTCTTCCCTCCAAATTCCGGCAGCGAGGGTTTGCGAAGGACATTTCCACATTTCAGGGTTTTACGAGAGTTTACAGTTGACAATGGCGACCATTATTTCTAGGAGTGCGAAGCATTTTCATTACGCAAATCGCTGTCTCTCTTTACACCGGCTGAGGCTGCATCCTTCGTCTTCGTCTTCCGTTCTAGCGGGCGCGAATCTTCACGATCGAGCTCTTCCCCTTCTTCAGTCGGGGCTTGGAATCAACCATTTAGCTATGTATATGAGGCGGCTGTATGGTACAACTTCTACTACTGTTGATTCTCAAAGCCCAGCCTCGGAGAGATCGGCAGAGTCCAATTCTAGTGAAGGGGATAAATCGGGGAAATCAAATCAGAGCCAGGATGCTGGAAAACCTGTTCGTGGTGGGCCGGTTTCATGGTTGAGTTTTCTTTTGCTGGTTGCCACTGGAGCGGGATTGGTTTTCTATTACGACAGGGAAAAGAAACGTCATATTGAAGAAATAAACAAGGCTTCCATAGAAGTCAAACAAGGACCATCTGTAGGAAAAGCAGCTATTGGGGGCCCATTTAAACTTGTCAATCATGATGGGAAGCAGGTCACAGAAAAAGACTTTTTTGGGAAATGGACATTGATATATTTTGGCTTCACTCACTGTCCAGATATCTGCCCAGACGAGCTTCAGAAGCTAGCTGCTGCAGTTGATAAAATCAAAAAGGCAGGAATTAAAATTTTGCCTATCTTCATCTCTGTTGATCCTGAGAGAGATACGGTAGAACAAGTGCGGGAATATGTCAAAGAATTCCATCCAGACTTGGTTGGGTTAACTGGGACTTCGGATGAGGTACGGAATGTAGCTCGGGCATATCGAGTTTATTATATGAAGACTGAAGAGGAAGACTCGGATTATCTTGTTGATCACTCCATAGTGATGTACTTAATGGGTCCTGAGAAGATGGAATTTGTAAAATTTTTTGGGAAAAACAACGACGTTGATTCACTTGCAGATGGTGTAATCAAAGAGATAAAGCAGTACAAGAAATAG

Protein sequence

MDPAHRKPIKPGPRSWLNLAPIAKSGRKVLPINRSPSSLQIPAARVCEGHFHISGFYESLQLTMATIISRSAKHFHYANRCLSLHRLRLHPSSSSSVLAGANLHDRALPLLQSGLGINHLAMYMRRLYGTTSTTVDSQSPASERSAESNSSEGDKSGKSNQSQDAGKPVRGGPVSWLSFLLLVATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLVNHDGKQVTEKDFFGKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKILPIFISVDPERDTVEQVREYVKEFHPDLVGLTGTSDEVRNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFGKNNDVDSLADGVIKEIKQYKK

Homology

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BLAST of Lcy04g008850 vs. ExPASy Swiss-Prot
Match: Q8VYP0 (Protein SCO1 homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HCC1 PE=1 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.1e-100
Identity = 189/304 (62.17%), Postives = 236/304 (77.63%), Query Frame = 0


Query: 92  SSSSSVLAGANLH-DRALP--LLQSGLGINHLAMYMRRLYGTTSTTVDS-------QSPA 151
           S S + ++ A  H D +LP        GI  L M  R L  T+++   S       ++ +
Sbjct: 32  SPSPACISDALRHGDFSLPRSFFSLNCGIEMLKMDQRCLLSTSASDTTSKHDSGKPETKS 91

Query: 152 SERSAESNSSEGDKSGKSNQSQDA-GKPVRGGPVSWLSFLLLVATGAGLVFYYDREKKRH 211
           SE++ +S  SE    G  ++++ A GK VRGGPVSW+SF LL ATGAGLV+YYD +KKRH
Sbjct: 92  SEKNEKSGGSESSDGGSDHKNERASGKDVRGGPVSWMSFFLLFATGAGLVYYYDTQKKRH 151

Query: 212 IEEINKASIEVKQGPSVGKAAIGGPFKLVNHDGKQVTEKDFFGKWTLIYFGFTHCPDICP 271
           IE+INK SI VK+GPS GKAAIGGPF L+  DGK+VTEK+  GKWT++YFGFTHCPDICP
Sbjct: 152 IEDINKNSIAVKEGPSAGKAAIGGPFSLIRDDGKRVTEKNLMGKWTILYFGFTHCPDICP 211

Query: 272 DELQKLAAAVDKIKK-AGIKILPIFISVDPERDTVEQVREYVKEFHPDLVGLTGTSDEVR 331
           DEL KLAAA+DKIK+ +G+ ++P+FISVDPERDTV+QV EYVKEFHP L+GLTG+ +E++
Sbjct: 212 DELIKLAAAIDKIKENSGVDVVPVFISVDPERDTVQQVHEYVKEFHPKLIGLTGSPEEIK 271

Query: 332 NVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFGKNNDVDSLADGVIKEIK 384
           +VAR+YRVYYMKTEEEDSDYLVDHSIVMYLM PE M FVKF+GKN+DVDSL DGV+KEI+
Sbjct: 272 SVARSYRVYYMKTEEEDSDYLVDHSIVMYLMSPE-MNFVKFYGKNHDVDSLTDGVVKEIR 331

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BLAST of Lcy04g008850 vs. ExPASy Swiss-Prot
Match: O75880 (Protein SCO1 homolog, mitochondrial OS=Homo sapiens OX=9606 GN=SCO1 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 5.4e-55
Identity = 104/223 (46.64%), Postives = 145/223 (65.02%), Query Frame = 0


Query: 164 DAGKPVRGGPVSWLSFLLLVATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIG 223
           D+ +P + GPVSW S  +  A G  L+      KK   E++ K     ++   +GK  +G
Sbjct: 83  DSTRPSKPGPVSWKSLAITFAIGGALLAGMKHVKKEKAEKLEK-----ERQRHIGKPLLG 142

Query: 224 GPFKLVNHDGKQVTEKDFFGKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGI--KIL 283
           GPF L  H G++ T+KD+ G+W LIYFGFTHCPD+CP+EL+K+   VD+I        + 
Sbjct: 143 GPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLT 202

Query: 284 PIFISVDPERDTVEQVREYVKEFHPDLVGLTGTSDEVRNVARAYRVYYMK-TEEEDSDYL 343
           P+FIS+DPERDT E +  YVKEF P LVGLTGT +EV  VARAYRVYY    ++ED DY+
Sbjct: 203 PLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYI 262

Query: 344 VDHSIVMYLMGPEKMEFVKFFGKNNDVDSLADGVIKEIKQYKK 384
           VDH+I+MYL+GP+  EF+ +FG+N     +A  +   ++ Y+K
Sbjct: 263 VDHTIIMYLIGPDG-EFLDYFGQNKRKGEIAASIATHMRPYRK 299

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BLAST of Lcy04g008850 vs. ExPASy Swiss-Prot
Match: A1A4J8 (Protein SCO1 homolog, mitochondrial OS=Bos taurus OX=9913 GN=SCO1 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.7e-53
Identity = 102/225 (45.33%), Postives = 145/225 (64.44%), Query Frame = 0


Query: 162 SQDAGKPVRGGPVSWLSFLLLVATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAA 221
           S D  +P + GPVSW S  +  A G  L+      KK   E++ K     ++  S+GK  
Sbjct: 85  SGDPMRPSKPGPVSWKSLAVTFAIGGALLAGMKYFKKEKTEKLEK-----ERHRSIGKPL 144

Query: 222 IGGPFKLVNHDGKQVTEKDFFGKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGI--K 281
           +GGPF L  H G+  T+KD+ G+W LIYFGFTHCPDICP+EL+K+   VD+I        
Sbjct: 145 LGGPFSLTTHTGEPKTDKDYLGQWVLIYFGFTHCPDICPEELEKMIQVVDEIDSIPTLPN 204

Query: 282 ILPIFISVDPERDTVEQVREYVKEFHPDLVGLTGTSDEVRNVARAYRVYYMK-TEEEDSD 341
           + P+FI++DPERDT E +  YVKEF P L+GLTGT +E+  VARA+RVYY    ++ED D
Sbjct: 205 LTPLFITIDPERDTKEAIANYVKEFSPKLIGLTGTKEEIDQVARAFRVYYSPGPKDEDED 264

Query: 342 YLVDHSIVMYLMGPEKMEFVKFFGKNNDVDSLADGVIKEIKQYKK 384
           Y+VDH+I+MYL+GP+  EF+ +FG+N     +A  +   ++ ++K
Sbjct: 265 YIVDHTIIMYLIGPDG-EFLDYFGQNKKNAEIAGSIAAHMRTHRK 303

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BLAST of Lcy04g008850 vs. ExPASy Swiss-Prot
Match: Q5SUC9 (Protein SCO1 homolog, mitochondrial OS=Mus musculus OX=10090 GN=Sco1 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.3e-53
Identity = 102/215 (47.44%), Postives = 141/215 (65.58%), Query Frame = 0


Query: 172 GPVSWLSFLLLVATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLVNH 231
           GPVSW S  L  A G  L+      KK  IE++ K     ++  S+GK  +GGPF L  H
Sbjct: 74  GPVSWKSLALTFAIGGSLLAGMKYFKKEKIEKLEK-----QRHRSIGKPLLGGPFSLTTH 133

Query: 232 DGKQVTEKDFFGKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGI--KILPIFISVDP 291
           +G+  T+KD+ G+W LIYFGFTHCPDICP+EL+K+   V++I        + P+FI++DP
Sbjct: 134 NGEPKTDKDYLGQWVLIYFGFTHCPDICPEELEKMIEVVEEIDSIPSLPNLTPLFITIDP 193

Query: 292 ERDTVEQVREYVKEFHPDLVGLTGTSDEVRNVARAYRVYYMK-TEEEDSDYLVDHSIVMY 351
           ERDT E +  YVKEF P LVGLTGT +E+  VARAYRVYY    ++ED DY+VDH+I+MY
Sbjct: 194 ERDTKEAIATYVKEFSPKLVGLTGTKEEIDGVARAYRVYYSPGPKDEDEDYIVDHTIIMY 253

Query: 352 LMGPEKMEFVKFFGKNNDVDSLADGVIKEIKQYKK 384
           L+GP+  EF+ +FG+N     +A  +   ++ + K
Sbjct: 254 LIGPDG-EFLDYFGQNKKKAEIAGSIAAHMRSHMK 282

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BLAST of Lcy04g008850 vs. ExPASy Swiss-Prot
Match: O42899 (Protein sco1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sco1 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.9e-46
Identity = 89/207 (43.00%), Postives = 136/207 (65.70%), Query Frame = 0


Query: 172 GPVSWLSFLLLVATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLVNH 231
           G +S  + LL  AT  GL  Y+  EKK+ +E  N      K   ++G+  +GG F L++H
Sbjct: 52  GMISIRALLLAAATSVGLYAYFQHEKKKVLERQND-----KVLATIGRPQLGGAFSLIDH 111

Query: 232 DGKQVTEKDFFGKWTLIYFGFTHCPDICPDELQKLAAAVDKIKK-AGIKILPIFISVDPE 291
            G +VT+ DF GK++LIYFGFT CPDICPDEL K++AA+D +    G  + PIFI+ DP 
Sbjct: 112 HGNRVTDNDFKGKFSLIYFGFTRCPDICPDELDKMSAAIDIVNNVVGDVVYPIFITCDPA 171

Query: 292 RDTVEQVREYVKEFHPDLVGLTGTSDEVRNVARAYRVYYMKTEEED---SDYLVDHSIVM 351
           RD  +++ EY+++F+P +VGLTG+ +E++++ + +RVY+   +  D    DYLVDHS+  
Sbjct: 172 RDPPQEMAEYLEDFNPKIVGLTGSYEEIKDICKKFRVYFSTPKNIDPKKDDYLVDHSVFF 231

Query: 352 YLMGPEKMEFVKFFGKNNDVDSLADGV 375
           YLM PE  +F++ FG+N+  + LA  +
Sbjct: 232 YLMDPEG-KFIEVFGRNSTSEDLARAI 252

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BLAST of Lcy04g008850 vs. ExPASy TrEMBL
Match: A0A0A0KXK5 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G310710 PE=3 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 5.4e-175
Identity = 314/354 (88.70%), Postives = 327/354 (92.37%), Query Frame = 0


Query: 35  SPSSLQIPAARVCEGHFHISGFYESLQLTMATIISRSAKHFHYANRCLSLHRLRLH---- 94
           SP SLQIPA RV EGHFH+SGFYE+L+ TMATIISRSAKH HYAN   SLHR+RLH    
Sbjct: 402 SPPSLQIPATRVSEGHFHVSGFYENLRFTMATIISRSAKHLHYANLSFSLHRMRLHSISP 461

Query: 95  -PSSSSSVLAGANLHDRALPLLQSGLGINHLAMYMRRLYGTTSTTVDSQSPASERSAESN 154
            PS+SSSVLAGAN HD A P L SG G+N LA YMRRLY TTSTT DSQS ASE+SAESN
Sbjct: 462 SPSTSSSVLAGANFHDPAFP-LHSGPGMNFLATYMRRLYSTTSTTADSQSAASEKSAESN 521

Query: 155 SSEGDKSGKSNQSQDAGKPVRGGPVSWLSFLLLVATGAGLVFYYDREKKRHIEEINKASI 214
           SSEGDKSG SN+ QDAGKPVRGGPVSWLSFLLLVATGAGLVFYYDREKKRHIEEINKAS 
Sbjct: 522 SSEGDKSGNSNEGQDAGKPVRGGPVSWLSFLLLVATGAGLVFYYDREKKRHIEEINKAST 581

Query: 215 EVKQGPSVGKAAIGGPFKLVNHDGKQVTEKDFFGKWTLIYFGFTHCPDICPDELQKLAAA 274
           EVKQGPSVGKAAIGGPFKLVNHDGKQVTEKDFFGKWTL+YFGFTHCPDICPDELQKLAAA
Sbjct: 582 EVKQGPSVGKAAIGGPFKLVNHDGKQVTEKDFFGKWTLLYFGFTHCPDICPDELQKLAAA 641

Query: 275 VDKIKKAGIKILPIFISVDPERDTVEQVREYVKEFHPDLVGLTGTSDEVRNVARAYRVYY 334
           VDKIKKAGIKI+P+FISVDPERDTVEQVREYVKEFHPDLVGLTG+SDE+RNVARAYRVYY
Sbjct: 642 VDKIKKAGIKIVPVFISVDPERDTVEQVREYVKEFHPDLVGLTGSSDEIRNVARAYRVYY 701

Query: 335 MKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFGKNNDVDSLADGVIKEIKQYKK 384
           MKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFGKNNDVDSLADGVIKEIKQYKK
Sbjct: 702 MKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFGKNNDVDSLADGVIKEIKQYKK 754

[Close]

BLAST of Lcy04g008850 vs. ExPASy TrEMBL
Match: A0A6J1HUB9 (protein SCO1 homolog 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111466249 PE=3 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 1.9e-164
Identity = 296/321 (92.21%), Postives = 308/321 (95.95%), Query Frame = 0


Query: 64  MATIISRSAKHFHYANRCLSLHRLRLH-PSSSSSVLAGANLHDRALPLLQSGLGINHLAM 123
           MA+IISR+AKHFH+ANRCLSLHRLRL  PSSSSSVLAGANLHD A P L SGLGIN+LA 
Sbjct: 1   MASIISRNAKHFHFANRCLSLHRLRLQSPSSSSSVLAGANLHDPAFPHLHSGLGINYLAS 60

Query: 124 YMRRLYGTTSTTVDSQSPASERSAESNSSEGDKSGKSNQSQDAGKPVRGGPVSWLSFLLL 183
           YMRRLYGTTSTT DSQ+ ASE+SAESNSSEGD+SGKSNQSQD GKPVRGGPVSWLSFLLL
Sbjct: 61  YMRRLYGTTSTTPDSQTTASEKSAESNSSEGDESGKSNQSQDTGKPVRGGPVSWLSFLLL 120

Query: 184 VATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLVNHDGKQVTEKDFF 243
           VATGAGLVFYYDREKK HIEEINKASIEVKQGPSVGKAAIGGPFKLV+HDGK V+EKDFF
Sbjct: 121 VATGAGLVFYYDREKKSHIEEINKASIEVKQGPSVGKAAIGGPFKLVDHDGKPVSEKDFF 180

Query: 244 GKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKILPIFISVDPERDTVEQVREYVK 303
           GKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKI+PIFISVDPERDTVEQVREYVK
Sbjct: 181 GKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKIVPIFISVDPERDTVEQVREYVK 240

Query: 304 EFHPDLVGLTGTSDEVRNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFG 363
           EFHPDL+GLTGTSDE+RNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFG
Sbjct: 241 EFHPDLIGLTGTSDEIRNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFG 300

Query: 364 KNNDVDSLADGVIKEIKQYKK 384
           KNNDVDSLADGVIKEIK YKK
Sbjct: 301 KNNDVDSLADGVIKEIKHYKK 321

[Close]

BLAST of Lcy04g008850 vs. ExPASy TrEMBL
Match: A0A1S3CMG3 (protein SCO1 homolog 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502140 PE=3 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 2.5e-164
Identity = 298/325 (91.69%), Postives = 305/325 (93.85%), Query Frame = 0


Query: 64  MATIISRSAKHFHYANRCLSLHRLRLH-----PSSSSSVLAGANLHDRALPLLQSGLGIN 123
           MATIISRSAK  HYAN C S HR+RLH     PS+SSSVLAGANLHDRA P L SGLG+N
Sbjct: 1   MATIISRSAKRLHYANLCFSFHRMRLHSLSLSPSTSSSVLAGANLHDRAFP-LHSGLGMN 60

Query: 124 HLAMYMRRLYGTTSTTVDSQSPASERSAESNSSEGDKSGKSNQSQDAGKPVRGGPVSWLS 183
            LA YMRRLY TTSTT DSQSPASE+S ESNSSEGDKSGKSN+ QDAGKPVRGGPVSWLS
Sbjct: 61  FLATYMRRLYSTTSTTADSQSPASEKSGESNSSEGDKSGKSNEGQDAGKPVRGGPVSWLS 120

Query: 184 FLLLVATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLVNHDGKQVTE 243
           FLLLVATGAGLVFYYDREKKRHIEEINKAS EVKQGPSVGKAAIGGPFKLVNHDGKQVTE
Sbjct: 121 FLLLVATGAGLVFYYDREKKRHIEEINKASTEVKQGPSVGKAAIGGPFKLVNHDGKQVTE 180

Query: 244 KDFFGKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKILPIFISVDPERDTVEQVR 303
           KDFFGKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKI+PIFISVDPERDTVEQVR
Sbjct: 181 KDFFGKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKIVPIFISVDPERDTVEQVR 240

Query: 304 EYVKEFHPDLVGLTGTSDEVRNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFV 363
           EYVKEFHPDLVGLTGTSDE+RNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFV
Sbjct: 241 EYVKEFHPDLVGLTGTSDEIRNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFV 300

Query: 364 KFFGKNNDVDSLADGVIKEIKQYKK 384
           KFFGKNNDVDSLADGVIKEIKQYKK
Sbjct: 301 KFFGKNNDVDSLADGVIKEIKQYKK 324

[Close]

BLAST of Lcy04g008850 vs. ExPASy TrEMBL
Match: A0A6J1EUS6 (protein SCO1 homolog 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111438138 PE=3 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 3.3e-164
Identity = 296/321 (92.21%), Postives = 307/321 (95.64%), Query Frame = 0


Query: 64  MATIISRSAKHFHYANRCLSLHRLRLH-PSSSSSVLAGANLHDRALPLLQSGLGINHLAM 123
           MA+IISRSAKHFH+ANRCLSLHRLRL  PSSSSSVLAGANLHD A P L SGLGIN+LA 
Sbjct: 1   MASIISRSAKHFHFANRCLSLHRLRLQSPSSSSSVLAGANLHDPAFPCLHSGLGINYLAS 60

Query: 124 YMRRLYGTTSTTVDSQSPASERSAESNSSEGDKSGKSNQSQDAGKPVRGGPVSWLSFLLL 183
           YMRRLYGTTSTT DSQ+ AS +SAESNSSEGD+SGKSNQSQD GKPVRGGPVSWLSFLLL
Sbjct: 61  YMRRLYGTTSTTPDSQTTASVKSAESNSSEGDESGKSNQSQDTGKPVRGGPVSWLSFLLL 120

Query: 184 VATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLVNHDGKQVTEKDFF 243
           VATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLV+HDGK V+EKDFF
Sbjct: 121 VATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLVDHDGKPVSEKDFF 180

Query: 244 GKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKILPIFISVDPERDTVEQVREYVK 303
           GKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKI+PIFISVDPERDTVEQVREYVK
Sbjct: 181 GKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKIVPIFISVDPERDTVEQVREYVK 240

Query: 304 EFHPDLVGLTGTSDEVRNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFG 363
           EFHPDL+GLTGTSDE+R VARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFG
Sbjct: 241 EFHPDLIGLTGTSDEIRKVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFG 300

Query: 364 KNNDVDSLADGVIKEIKQYKK 384
           KNNDVDSLADGVIKEIK YKK
Sbjct: 301 KNNDVDSLADGVIKEIKHYKK 321

[Close]

BLAST of Lcy04g008850 vs. ExPASy TrEMBL
Match: A0A6J1DER9 (protein SCO1 homolog 1, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019404 PE=3 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 1.6e-163
Identity = 294/325 (90.46%), Postives = 305/325 (93.85%), Query Frame = 0


Query: 64  MATIISRSAKHFHYANRCLSLHRLRLHP-----SSSSSVLAGANLHDRALPLLQSGLGIN 123
           MATIISR AKHFHYANRCLSLHRL L       S SSSV+AGANLHDR  PLLQSGLGIN
Sbjct: 1   MATIISRGAKHFHYANRCLSLHRLSLRSHSNSHSPSSSVVAGANLHDRDFPLLQSGLGIN 60

Query: 124 HLAMYMRRLYGTTSTTVDSQSPASERSAESNSSEGDKSGKSNQSQDAGKPVRGGPVSWLS 183
           +LAMYMRRLYGT S T DSQSPASERS ESNSSEGD SGKSNQS DAGK VRGGPVSWLS
Sbjct: 61  YLAMYMRRLYGTGSPTADSQSPASERSTESNSSEGDDSGKSNQSNDAGKSVRGGPVSWLS 120

Query: 184 FLLLVATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLVNHDGKQVTE 243
           FLLLVATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKL+NHDGK+VTE
Sbjct: 121 FLLLVATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLINHDGKKVTE 180

Query: 244 KDFFGKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKILPIFISVDPERDTVEQVR 303
           KDFFG+WTL+YFGFTHCPDICPDELQKLAAAVDKIKKAGIKI+P+FISVDPERDTVEQVR
Sbjct: 181 KDFFGRWTLVYFGFTHCPDICPDELQKLAAAVDKIKKAGIKIVPVFISVDPERDTVEQVR 240

Query: 304 EYVKEFHPDLVGLTGTSDEVRNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFV 363
           EYVKEFHPDLVGLTGTS+E+RNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGP+ MEFV
Sbjct: 241 EYVKEFHPDLVGLTGTSEEIRNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPKSMEFV 300

Query: 364 KFFGKNNDVDSLADGVIKEIKQYKK 384
           KFFGKNNDVDSLADGVIKEIKQYKK
Sbjct: 301 KFFGKNNDVDSLADGVIKEIKQYKK 325

[Close]

BLAST of Lcy04g008850 vs. NCBI nr
Match: XP_022966624.1 (protein SCO1 homolog 1, mitochondrial [Cucurbita maxima])

HSP 1 Score: 588.6 bits (1516), Expect = 4.0e-164
Identity = 296/321 (92.21%), Postives = 308/321 (95.95%), Query Frame = 0


Query: 64  MATIISRSAKHFHYANRCLSLHRLRLH-PSSSSSVLAGANLHDRALPLLQSGLGINHLAM 123
           MA+IISR+AKHFH+ANRCLSLHRLRL  PSSSSSVLAGANLHD A P L SGLGIN+LA 
Sbjct: 1   MASIISRNAKHFHFANRCLSLHRLRLQSPSSSSSVLAGANLHDPAFPHLHSGLGINYLAS 60

Query: 124 YMRRLYGTTSTTVDSQSPASERSAESNSSEGDKSGKSNQSQDAGKPVRGGPVSWLSFLLL 183
           YMRRLYGTTSTT DSQ+ ASE+SAESNSSEGD+SGKSNQSQD GKPVRGGPVSWLSFLLL
Sbjct: 61  YMRRLYGTTSTTPDSQTTASEKSAESNSSEGDESGKSNQSQDTGKPVRGGPVSWLSFLLL 120

Query: 184 VATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLVNHDGKQVTEKDFF 243
           VATGAGLVFYYDREKK HIEEINKASIEVKQGPSVGKAAIGGPFKLV+HDGK V+EKDFF
Sbjct: 121 VATGAGLVFYYDREKKSHIEEINKASIEVKQGPSVGKAAIGGPFKLVDHDGKPVSEKDFF 180

Query: 244 GKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKILPIFISVDPERDTVEQVREYVK 303
           GKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKI+PIFISVDPERDTVEQVREYVK
Sbjct: 181 GKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKIVPIFISVDPERDTVEQVREYVK 240

Query: 304 EFHPDLVGLTGTSDEVRNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFG 363
           EFHPDL+GLTGTSDE+RNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFG
Sbjct: 241 EFHPDLIGLTGTSDEIRNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFG 300

Query: 364 KNNDVDSLADGVIKEIKQYKK 384
           KNNDVDSLADGVIKEIK YKK
Sbjct: 301 KNNDVDSLADGVIKEIKHYKK 321

[Close]

BLAST of Lcy04g008850 vs. NCBI nr
Match: XP_008464205.1 (PREDICTED: protein SCO1 homolog 1, mitochondrial [Cucumis melo])

HSP 1 Score: 588.2 bits (1515), Expect = 5.2e-164
Identity = 298/325 (91.69%), Postives = 305/325 (93.85%), Query Frame = 0


Query: 64  MATIISRSAKHFHYANRCLSLHRLRLH-----PSSSSSVLAGANLHDRALPLLQSGLGIN 123
           MATIISRSAK  HYAN C S HR+RLH     PS+SSSVLAGANLHDRA P L SGLG+N
Sbjct: 1   MATIISRSAKRLHYANLCFSFHRMRLHSLSLSPSTSSSVLAGANLHDRAFP-LHSGLGMN 60

Query: 124 HLAMYMRRLYGTTSTTVDSQSPASERSAESNSSEGDKSGKSNQSQDAGKPVRGGPVSWLS 183
            LA YMRRLY TTSTT DSQSPASE+S ESNSSEGDKSGKSN+ QDAGKPVRGGPVSWLS
Sbjct: 61  FLATYMRRLYSTTSTTADSQSPASEKSGESNSSEGDKSGKSNEGQDAGKPVRGGPVSWLS 120

Query: 184 FLLLVATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLVNHDGKQVTE 243
           FLLLVATGAGLVFYYDREKKRHIEEINKAS EVKQGPSVGKAAIGGPFKLVNHDGKQVTE
Sbjct: 121 FLLLVATGAGLVFYYDREKKRHIEEINKASTEVKQGPSVGKAAIGGPFKLVNHDGKQVTE 180

Query: 244 KDFFGKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKILPIFISVDPERDTVEQVR 303
           KDFFGKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKI+PIFISVDPERDTVEQVR
Sbjct: 181 KDFFGKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKIVPIFISVDPERDTVEQVR 240

Query: 304 EYVKEFHPDLVGLTGTSDEVRNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFV 363
           EYVKEFHPDLVGLTGTSDE+RNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFV
Sbjct: 241 EYVKEFHPDLVGLTGTSDEIRNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFV 300

Query: 364 KFFGKNNDVDSLADGVIKEIKQYKK 384
           KFFGKNNDVDSLADGVIKEIKQYKK
Sbjct: 301 KFFGKNNDVDSLADGVIKEIKQYKK 324

[Close]

BLAST of Lcy04g008850 vs. NCBI nr
Match: XP_022931851.1 (protein SCO1 homolog 1, mitochondrial [Cucurbita moschata])

HSP 1 Score: 587.8 bits (1514), Expect = 6.7e-164
Identity = 296/321 (92.21%), Postives = 307/321 (95.64%), Query Frame = 0


Query: 64  MATIISRSAKHFHYANRCLSLHRLRLH-PSSSSSVLAGANLHDRALPLLQSGLGINHLAM 123
           MA+IISRSAKHFH+ANRCLSLHRLRL  PSSSSSVLAGANLHD A P L SGLGIN+LA 
Sbjct: 1   MASIISRSAKHFHFANRCLSLHRLRLQSPSSSSSVLAGANLHDPAFPCLHSGLGINYLAS 60

Query: 124 YMRRLYGTTSTTVDSQSPASERSAESNSSEGDKSGKSNQSQDAGKPVRGGPVSWLSFLLL 183
           YMRRLYGTTSTT DSQ+ AS +SAESNSSEGD+SGKSNQSQD GKPVRGGPVSWLSFLLL
Sbjct: 61  YMRRLYGTTSTTPDSQTTASVKSAESNSSEGDESGKSNQSQDTGKPVRGGPVSWLSFLLL 120

Query: 184 VATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLVNHDGKQVTEKDFF 243
           VATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLV+HDGK V+EKDFF
Sbjct: 121 VATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLVDHDGKPVSEKDFF 180

Query: 244 GKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKILPIFISVDPERDTVEQVREYVK 303
           GKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKI+PIFISVDPERDTVEQVREYVK
Sbjct: 181 GKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKIVPIFISVDPERDTVEQVREYVK 240

Query: 304 EFHPDLVGLTGTSDEVRNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFG 363
           EFHPDL+GLTGTSDE+R VARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFG
Sbjct: 241 EFHPDLIGLTGTSDEIRKVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFG 300

Query: 364 KNNDVDSLADGVIKEIKQYKK 384
           KNNDVDSLADGVIKEIK YKK
Sbjct: 301 KNNDVDSLADGVIKEIKHYKK 321

[Close]

BLAST of Lcy04g008850 vs. NCBI nr
Match: KAG6595394.1 (Protein SCO1-like 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 587.8 bits (1514), Expect = 6.7e-164
Identity = 296/321 (92.21%), Postives = 307/321 (95.64%), Query Frame = 0


Query: 64  MATIISRSAKHFHYANRCLSLHRLRLH-PSSSSSVLAGANLHDRALPLLQSGLGINHLAM 123
           MA+IISRSAKHFH+ANRCLSLHRLRL  PSSSSSVLAGANLHD A P L SGLGIN+LA 
Sbjct: 1   MASIISRSAKHFHFANRCLSLHRLRLQSPSSSSSVLAGANLHDPAFPYLHSGLGINYLAS 60

Query: 124 YMRRLYGTTSTTVDSQSPASERSAESNSSEGDKSGKSNQSQDAGKPVRGGPVSWLSFLLL 183
           YMRRLYGTTSTT DSQ+ ASE+SAESNSSEGD+SGKSNQSQD GKPVRGGPVSWLSFLLL
Sbjct: 61  YMRRLYGTTSTTPDSQTTASEKSAESNSSEGDESGKSNQSQDTGKPVRGGPVSWLSFLLL 120

Query: 184 VATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLVNHDGKQVTEKDFF 243
           VATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLV+HDGK V+EKDFF
Sbjct: 121 VATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLVDHDGKPVSEKDFF 180

Query: 244 GKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKILPIFISVDPERDTVEQVREYVK 303
           GKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAG KI+PIFISVDPERDTVEQVREYVK
Sbjct: 181 GKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGNKIVPIFISVDPERDTVEQVREYVK 240

Query: 304 EFHPDLVGLTGTSDEVRNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFG 363
           EFHPDL+GLTGTSDE+R VARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFG
Sbjct: 241 EFHPDLIGLTGTSDEIRKVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFG 300

Query: 364 KNNDVDSLADGVIKEIKQYKK 384
           KNNDVDSLADGVIKEIK YKK
Sbjct: 301 KNNDVDSLADGVIKEIKHYKK 321

[Close]

BLAST of Lcy04g008850 vs. NCBI nr
Match: XP_022151471.1 (protein SCO1 homolog 1, mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 585.5 bits (1508), Expect = 3.3e-163
Identity = 294/325 (90.46%), Postives = 305/325 (93.85%), Query Frame = 0


Query: 64  MATIISRSAKHFHYANRCLSLHRLRLHP-----SSSSSVLAGANLHDRALPLLQSGLGIN 123
           MATIISR AKHFHYANRCLSLHRL L       S SSSV+AGANLHDR  PLLQSGLGIN
Sbjct: 1   MATIISRGAKHFHYANRCLSLHRLSLRSHSNSHSPSSSVVAGANLHDRDFPLLQSGLGIN 60

Query: 124 HLAMYMRRLYGTTSTTVDSQSPASERSAESNSSEGDKSGKSNQSQDAGKPVRGGPVSWLS 183
           +LAMYMRRLYGT S T DSQSPASERS ESNSSEGD SGKSNQS DAGK VRGGPVSWLS
Sbjct: 61  YLAMYMRRLYGTGSPTADSQSPASERSTESNSSEGDDSGKSNQSNDAGKSVRGGPVSWLS 120

Query: 184 FLLLVATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLVNHDGKQVTE 243
           FLLLVATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKL+NHDGK+VTE
Sbjct: 121 FLLLVATGAGLVFYYDREKKRHIEEINKASIEVKQGPSVGKAAIGGPFKLINHDGKKVTE 180

Query: 244 KDFFGKWTLIYFGFTHCPDICPDELQKLAAAVDKIKKAGIKILPIFISVDPERDTVEQVR 303
           KDFFG+WTL+YFGFTHCPDICPDELQKLAAAVDKIKKAGIKI+P+FISVDPERDTVEQVR
Sbjct: 181 KDFFGRWTLVYFGFTHCPDICPDELQKLAAAVDKIKKAGIKIVPVFISVDPERDTVEQVR 240

Query: 304 EYVKEFHPDLVGLTGTSDEVRNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFV 363
           EYVKEFHPDLVGLTGTS+E+RNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGP+ MEFV
Sbjct: 241 EYVKEFHPDLVGLTGTSEEIRNVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPKSMEFV 300

Query: 364 KFFGKNNDVDSLADGVIKEIKQYKK 384
           KFFGKNNDVDSLADGVIKEIKQYKK
Sbjct: 301 KFFGKNNDVDSLADGVIKEIKQYKK 325

[Close]

BLAST of Lcy04g008850 vs. TAIR 10
Match: AT3G08950.1 (electron transport SCO1/SenC family protein )

HSP 1 Score: 368.2 bits (944), Expect = 7.8e-102
Identity = 189/304 (62.17%), Postives = 236/304 (77.63%), Query Frame = 0


Query: 92  SSSSSVLAGANLH-DRALP--LLQSGLGINHLAMYMRRLYGTTSTTVDS-------QSPA 151
           S S + ++ A  H D +LP        GI  L M  R L  T+++   S       ++ +
Sbjct: 32  SPSPACISDALRHGDFSLPRSFFSLNCGIEMLKMDQRCLLSTSASDTTSKHDSGKPETKS 91

Query: 152 SERSAESNSSEGDKSGKSNQSQDA-GKPVRGGPVSWLSFLLLVATGAGLVFYYDREKKRH 211
           SE++ +S  SE    G  ++++ A GK VRGGPVSW+SF LL ATGAGLV+YYD +KKRH
Sbjct: 92  SEKNEKSGGSESSDGGSDHKNERASGKDVRGGPVSWMSFFLLFATGAGLVYYYDTQKKRH 151

Query: 212 IEEINKASIEVKQGPSVGKAAIGGPFKLVNHDGKQVTEKDFFGKWTLIYFGFTHCPDICP 271
           IE+INK SI VK+GPS GKAAIGGPF L+  DGK+VTEK+  GKWT++YFGFTHCPDICP
Sbjct: 152 IEDINKNSIAVKEGPSAGKAAIGGPFSLIRDDGKRVTEKNLMGKWTILYFGFTHCPDICP 211

Query: 272 DELQKLAAAVDKIKK-AGIKILPIFISVDPERDTVEQVREYVKEFHPDLVGLTGTSDEVR 331
           DEL KLAAA+DKIK+ +G+ ++P+FISVDPERDTV+QV EYVKEFHP L+GLTG+ +E++
Sbjct: 212 DELIKLAAAIDKIKENSGVDVVPVFISVDPERDTVQQVHEYVKEFHPKLIGLTGSPEEIK 271

Query: 332 NVARAYRVYYMKTEEEDSDYLVDHSIVMYLMGPEKMEFVKFFGKNNDVDSLADGVIKEIK 384
           +VAR+YRVYYMKTEEEDSDYLVDHSIVMYLM PE M FVKF+GKN+DVDSL DGV+KEI+
Sbjct: 272 SVARSYRVYYMKTEEEDSDYLVDHSIVMYLMSPE-MNFVKFYGKNHDVDSLTDGVVKEIR 331

[Close]

BLAST of Lcy04g008850 vs. TAIR 10
Match: AT4G39740.1 (Thioredoxin superfamily protein )

HSP 1 Score: 162.5 bits (410), Expect = 6.5e-40
Identity = 76/158 (48.10%), Postives = 112/158 (70.89%), Query Frame = 0


Query: 222 IGGPFKLVNHDGKQVTEKDFFGKWTLIYFGFTHCPDICPDELQKLAAAVDKIK-KAGIKI 281
           IGGPF LV+ + K VTE DF GKW L+YFG++  PD+ P++L+ ++ AVDK++ K   KI
Sbjct: 115 IGGPFTLVSTENKIVTENDFCGKWVLLYFGYSFSPDVGPEQLKMMSKAVDKLESKHNEKI 174

Query: 282 LPIFISVDPERDTVEQVREYVKEFHPDLVGLTGTSDEVRNVARAYRVYYMKTEEEDSDYL 341
           LP+F+++DP+RDT   +  Y+KEF   ++GLTGT+  +R +A+ YRVY+ K +E+  DYL
Sbjct: 175 LPVFVTLDPQRDTPSHLHAYLKEFDSRILGLTGTASAMRQMAQEYRVYFKKVQEDGEDYL 234

Query: 342 VDHSIVMYLMGPEKMEFVKFFGKNNDVDSLADGVIKEI 379
           VD S  MYL+ P KME V+ FG   + D L+  ++KE+
Sbjct: 235 VDTSHNMYLINP-KMEIVRCFGVEYNPDELSQELLKEV 271

The following BLAST results are available for this feature:

BLAST of Lcy04g008850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYP0	1.1e-100	62.17	Protein SCO1 homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HCC1 PE...	[more]
O75880	5.4e-55	46.64	Protein SCO1 homolog, mitochondrial OS=Homo sapiens OX=9606 GN=SCO1 PE=1 SV=1	[more]
A1A4J8	1.7e-53	45.33	Protein SCO1 homolog, mitochondrial OS=Bos taurus OX=9913 GN=SCO1 PE=2 SV=1	[more]
Q5SUC9	2.3e-53	47.44	Protein SCO1 homolog, mitochondrial OS=Mus musculus OX=10090 GN=Sco1 PE=1 SV=1	[more]
O42899	5.9e-46	43.00	Protein sco1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of Lcy04g008850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXK5	5.4e-175	88.70	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G310710...	[more]
A0A6J1HUB9	1.9e-164	92.21	protein SCO1 homolog 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC11146624...	[more]
A0A1S3CMG3	2.5e-164	91.69	protein SCO1 homolog 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502140 PE...	[more]
A0A6J1EUS6	3.3e-164	92.21	protein SCO1 homolog 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111438...	[more]
A0A6J1DER9	1.6e-163	90.46	protein SCO1 homolog 1, mitochondrial isoform X2 OS=Momordica charantia OX=3673 ...	[more]

BLAST of Lcy04g008850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966624.1	4.0e-164	92.21	protein SCO1 homolog 1, mitochondrial [Cucurbita maxima]	[more]
XP_008464205.1	5.2e-164	91.69	PREDICTED: protein SCO1 homolog 1, mitochondrial [Cucumis melo]	[more]
XP_022931851.1	6.7e-164	92.21	protein SCO1 homolog 1, mitochondrial [Cucurbita moschata]	[more]
KAG6595394.1	6.7e-164	92.21	Protein SCO1-like 1, mitochondrial, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022151471.1	3.3e-163	90.46	protein SCO1 homolog 1, mitochondrial isoform X2 [Momordica charantia]	[more]

BLAST of Lcy04g008850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08950.1	7.8e-102	62.17	electron transport SCO1/SenC family protein	[more]
AT4G39740.1	6.5e-40	48.10	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 161..383 e-value: 5.1E-61 score: 207.3
None	No IPR available	PIRSR	PIRSR037736-1	PIRSR037736-1	coord: 218..366 e-value: 1.0E-59 score: 198.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..169
None	No IPR available	PANTHER	PTHR12151:SF23	BNAC03G36280D PROTEIN	coord: 97..383
IPR003782	Copper chaperone SCO1/SenC	PFAM	PF02630	SCO1-SenC	coord: 223..353 e-value: 9.5E-53 score: 177.8
IPR003782	Copper chaperone SCO1/SenC	PANTHER	PTHR12151	ELECTRON TRANSPORT PROTIN SCO1/SENC FAMILY MEMBER	coord: 97..383
IPR003782	Copper chaperone SCO1/SenC	CDD	cd02968	SCO	coord: 222..362 e-value: 1.45007E-69 score: 213.234
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 215..380 score: 11.197981
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 221..380

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g008850.1	Lcy04g008850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006878	cellular copper ion homeostasis
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0033617	mitochondrial cytochrome c oxidase assembly
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0016531	copper chaperone activity
molecular_function	GO:0005507	copper ion binding