Lcy04g008560 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g008560
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	macrophage migration inhibitory factor homolog
Location	Chr04: 39595651 .. 39596609 (+)
RNA-Seq Expression	Lcy04g008560
Synteny	Lcy04g008560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTTTTCCCCTTAAACTCAACCTGCTCTTTCATATCCATAATCACCATGCCTTGCCTTTACATCTCCACCAATGTCGATTTGGCCGGAGTCGACTCCTCCGCCATCTTCACCGCCACCACCACCGCCGTCTCCTCCATTATCGGCAAACCCGAAAAAGTAAAGATTTGTTTGTTATACACTTCCTCTTCCTTGCTCTCGTTCCATGCAAAATGAGATATAAGTTTGAAAATAATTAATTTTTTTTACGTATCGTGAAATAATTTGAGACGATTGTCTCTCTCCTTCCTTTCTTCATCCGCCCTTTTTTGATGGATTTTTTTTTCTTTGGACAGTTTGTGATGGTGTTGCTAAAAGGATCGGTGCCGATATCGTTCGGGGGGAACGGAGAACCGGCGGTGTTCGCGGAGGTGGTGTCGATGGGAGGAATAAACTCAGAAGTGAAGAGGAAGCTAATCTCCACCCTTGGAAGCATTTTGAATGAAAAGCTTTCGGTTCCGCCGGCGAGATTCTTTCTTAAAGTCCACGACACGACGGCTGGTCGTCCCGTTTCCAAATTATGACTCTCCGGCACGACGGCGCCAAGTCCACCGCGGCTGCCTGCAGTTTGACCTGTTCCAAGTTTGAATTTTTCTTAAGTGGTCTCTCTGTTTCTTCTATGTTGACAGTTAATTGGGAAGTTGGAAAATTTATTCGAAAGCCTACAAAAGATACGACAATGAGAAAGGATAGAGAGAAAAGAGATTCCTCTTTTTCAATATAATAATTGTTTGATTTTCATGCTTTGTATTTCAAAGGCTTTTACATTTGGTGGTTTAGAAAAATAATAATATAAAACAAATAAAGTTTTAATTTTTTAGTAATTTTCGTGTCAATGGATCATTGATCTACGTAATTTGGATTGGATGTGGTTGAATGGTTTGGTTTAGTAGTTTAATTTTATGATAATATTTGGAAAG

mRNA sequence

TTCCTTTTCCCCTTAAACTCAACCTGCTCTTTCATATCCATAATCACCATGCCTTGCCTTTACATCTCCACCAATGTCGATTTGGCCGGAGTCGACTCCTCCGCCATCTTCACCGCCACCACCACCGCCGTCTCCTCCATTATCGGCAAACCCGAAAAATTTGTGATGGTGTTGCTAAAAGGATCGGTGCCGATATCGTTCGGGGGGAACGGAGAACCGGCGGTGTTCGCGGAGGTGGTGTCGATGGGAGGAATAAACTCAGAAGTGAAGAGGAAGCTAATCTCCACCCTTGGAAGCATTTTGAATGAAAAGCTTTCGGTTCCGCCGGCGAGATTCTTTCTTAAAGTCCACGACACGACGGCTGGTCGTCCCGTTTCCAAATTATGACTCTCCGGCACGACGGCGCCAAGTCCACCGCGGCTGCCTGCAGTTTGACCTGTTCCAAGTTTGAATTTTTCTTAAGTGGTCTCTCTGTTTCTTCTATGTTGACAGTTAATTGGGAAGTTGGAAAATTTATTCGAAAGCCTACAAAAGATACGACAATGAGAAAGGATAGAGAGAAAAGAGATTCCTCTTTTTCAATATAATAATTGTTTGATTTTCATGCTTTGTATTTCAAAGGCTTTTACATTTGGTGGTTTAGAAAAATAATAATATAAAACAAATAAAGTTTTAATTTTTTAGTAATTTTCGTGTCAATGGATCATTGATCTACGTAATTTGGATTGGATGTGGTTGAATGGTTTGGTTTAGTAGTTTAATTTTATGATAATATTTGGAAAG

Coding sequence (CDS)

ATGCCTTGCCTTTACATCTCCACCAATGTCGATTTGGCCGGAGTCGACTCCTCCGCCATCTTCACCGCCACCACCACCGCCGTCTCCTCCATTATCGGCAAACCCGAAAAATTTGTGATGGTGTTGCTAAAAGGATCGGTGCCGATATCGTTCGGGGGGAACGGAGAACCGGCGGTGTTCGCGGAGGTGGTGTCGATGGGAGGAATAAACTCAGAAGTGAAGAGGAAGCTAATCTCCACCCTTGGAAGCATTTTGAATGAAAAGCTTTCGGTTCCGCCGGCGAGATTCTTTCTTAAAGTCCACGACACGACGGCTGGTCGTCCCGTTTCCAAATTATGA

Protein sequence

MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVFAEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDTTAGRPVSKL

Homology

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BLAST of Lcy04g008560 vs. ExPASy Swiss-Prot
Match: P81748 (Macrophage migration inhibitory factor homolog OS=Trichuris trichiura OX=36087 PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 5.5e-08
Identity = 33/102 (32.35%), Postives = 53/102 (51.96%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MP    STNV    + S     +T+  ++ ++GKPE +V V + G   I+FGG   PA F
Sbjct: 1   MPIFTFSTNVPSENI-SVDFLKSTSKLIAGMLGKPESYVAVHINGGQKITFGGTDAPAGF 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHD 103
            +++S+GG+  E  R   + L   L + L +P  R ++   D
Sbjct: 61  GQLLSLGGVGGEKNRSHSAKLFKHLTDGLGIPGNRMYINFVD 101

[Close]

BLAST of Lcy04g008560 vs. ExPASy Swiss-Prot
Match: P81529 (Macrophage migration inhibitory factor homolog OS=Trichinella spiralis OX=6334 PE=1 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 2.7e-07
Identity = 32/98 (32.65%), Postives = 53/98 (54.08%), Query Frame = 0


Query: 1  MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
          MP   ++TN+    V S    ++T+  V +I+ KP  +V V +     +SFGG+ +PA F
Sbjct: 1  MPIFTLNTNIKATDVPSD-FLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTKPAAF 60

Query: 61 AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFL 99
            ++S+GGI     R   + L   LN+KL +P  R ++
Sbjct: 61 GTLMSIGGIEPSRNRDHSAKLFDHLNKKLGIPKNRMYI 97

[Close]

BLAST of Lcy04g008560 vs. ExPASy Swiss-Prot
Match: P91850 (Macrophage migration inhibitory factor homolog OS=Brugia malayi OX=6279 GN=Bm1_28435 PE=3 SV=4)

HSP 1 Score: 49.7 bits (117), Expect = 2.5e-05
Identity = 29/105 (27.62%), Postives = 51/105 (48.57%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MP   I TN+    + SSA     +  V+  +GKPE +V + + G   + FGG+ +P   
Sbjct: 1   MPYFTIDTNIPQNSI-SSAFLKKASNVVAKALGKPESYVSIHVNGGQAMVFGGSEDPCAV 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDTTA 106
             + S+G +  +V       L  +L ++L +P  R +++  D  A
Sbjct: 61  CVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIEFVDIEA 104

[Close]

BLAST of Lcy04g008560 vs. ExPASy Swiss-Prot
Match: P80177 (Macrophage migration inhibitory factor OS=Bos taurus OX=9913 GN=MIF PE=1 SV=6)

HSP 1 Score: 48.5 bits (114), Expect = 5.7e-05
Identity = 29/105 (27.62%), Postives = 49/105 (46.67%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MP   ++TNV  A V    + +  T  ++   GKP +++ V +     ++FGG+ EP   
Sbjct: 1   MPMFVVNTNVPRASV-PDGLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFGGSSEPCAL 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDTTA 106
             + S+G I     R     L  +L E+L + P R ++   D  A
Sbjct: 61  CSLHSIGKIGGAQNRSYSKLLCGLLTERLRISPDRIYINFCDMNA 104

[Close]

BLAST of Lcy04g008560 vs. ExPASy Swiss-Prot
Match: Q1ZZU7 (Macrophage migration inhibitory factor OS=Ovis aries OX=9940 GN=MIF PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 5.7e-05
Identity = 29/105 (27.62%), Postives = 49/105 (46.67%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MP   ++TNV  A V    + +  T  ++   GKP +++ V +     ++FGG+ EP   
Sbjct: 1   MPMFVVNTNVPRASV-PDGLLSELTQQLAQATGKPAQYIAVHVVPDQLMTFGGSSEPCAL 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDTTA 106
             + S+G I     R     L  +L E+L + P R ++   D  A
Sbjct: 61  CSLHSIGKIGGAQNRSYSKLLCGLLTERLRISPDRIYINFCDMNA 104

[Close]

BLAST of Lcy04g008560 vs. ExPASy TrEMBL
Match: A0A1S3CL09 (macrophage migration inhibitory factor homolog OS=Cucumis melo OX=3656 GN=LOC103502168 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.6e-49
Identity = 103/112 (91.96%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MPCLYISTNV+LAGVDS+AIF+ATTTAVSSIIGKPE +VMVLL GSVPISFGGNG+PAVF
Sbjct: 1   MPCLYISTNVNLAGVDSAAIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAVF 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKR+LISTLGSILNEKLSVPPARFFLKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]

BLAST of Lcy04g008560 vs. ExPASy TrEMBL
Match: A0A0A0L1F7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314440 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 7.3e-48
Identity = 101/112 (90.18%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MPCLYISTNV+LAGVDS+ IF+ATTTAVSSIIGKPE +VMVLL GSVPISFGGNG+PA F
Sbjct: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKR+LISTLGSILNEKLSVPPARFFLKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]

BLAST of Lcy04g008560 vs. ExPASy TrEMBL
Match: A0A6J1CQN7 (macrophage migration inhibitory factor homolog OS=Momordica charantia OX=3673 GN=LOC111013868 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.4e-46
Identity = 98/112 (87.50%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MPCLYISTNVDLAG D++AIF+ATTTAVSSIIGKPE FVMVLLKGSV ISFGGNGEPA F
Sbjct: 1   MPCLYISTNVDLAGADTAAIFSATTTAVSSIIGKPENFVMVLLKGSVAISFGGNGEPAAF 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINS+VKR LIST+ +ILN+KLSVPPARFFLKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSQVKRNLISTIAAILNDKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]

BLAST of Lcy04g008560 vs. ExPASy TrEMBL
Match: A0A6J1GDU8 (macrophage migration inhibitory factor homolog OS=Cucurbita moschata OX=3662 GN=LOC111453099 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.9e-46
Identity = 99/112 (88.39%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MPCLYISTNVDLAG DS+AIF ATT+AVSSIIGKPE +VMVLLKGSV ISFGGN EPA F
Sbjct: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKR+LI+T+GSIL EKLSVPPARFFLKVHDTTAGRPVSKL
Sbjct: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 112

[Close]

BLAST of Lcy04g008560 vs. ExPASy TrEMBL
Match: A0A6J1IKS8 (macrophage migration inhibitory factor homolog OS=Cucurbita maxima OX=3661 GN=LOC111478343 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.4e-45
Identity = 98/112 (87.50%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MPCLYISTNVDLAG DS+AIF ATT+AVSSIIGKPE +VMVLLKGSV ISFGGN EPA F
Sbjct: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKR+LI+T+GSIL EKLSVPPARF LKVHDTTAGRPVSKL
Sbjct: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFVLKVHDTTAGRPVSKL 112

[Close]

BLAST of Lcy04g008560 vs. NCBI nr
Match: XP_038883562.1 (macrophage migration inhibitory factor homolog [Benincasa hispida])

HSP 1 Score: 203.0 bits (515), Expect = 1.4e-48
Identity = 103/112 (91.96%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MPCLYISTNV+LAG DS+AIF+ATTTAVSSIIGKPE +VMVLLKGSVPISFGGNGEPA F
Sbjct: 1   MPCLYISTNVNLAGADSTAIFSATTTAVSSIIGKPENYVMVLLKGSVPISFGGNGEPAAF 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKR+LISTLGSILNEKLSVPPARFFLKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]

BLAST of Lcy04g008560 vs. NCBI nr
Match: XP_008464238.1 (PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo])

HSP 1 Score: 203.0 bits (515), Expect = 1.4e-48
Identity = 103/112 (91.96%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MPCLYISTNV+LAGVDS+AIF+ATTTAVSSIIGKPE +VMVLL GSVPISFGGNG+PAVF
Sbjct: 1   MPCLYISTNVNLAGVDSAAIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAVF 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKR+LISTLGSILNEKLSVPPARFFLKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]

BLAST of Lcy04g008560 vs. NCBI nr
Match: XP_004148599.1 (macrophage migration inhibitory factor homolog [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 1.5e-47
Identity = 101/112 (90.18%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MPCLYISTNV+LAGVDS+ IF+ATTTAVSSIIGKPE +VMVLL GSVPISFGGNG+PA F
Sbjct: 1   MPCLYISTNVNLAGVDSAPIFSATTTAVSSIIGKPENYVMVLLNGSVPISFGGNGDPAAF 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKR+LISTLGSILNEKLSVPPARFFLKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSEVKRRLISTLGSILNEKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]

BLAST of Lcy04g008560 vs. NCBI nr
Match: XP_022144090.1 (macrophage migration inhibitory factor homolog [Momordica charantia])

HSP 1 Score: 194.5 bits (493), Expect = 4.9e-46
Identity = 98/112 (87.50%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MPCLYISTNVDLAG D++AIF+ATTTAVSSIIGKPE FVMVLLKGSV ISFGGNGEPA F
Sbjct: 1   MPCLYISTNVDLAGADTAAIFSATTTAVSSIIGKPENFVMVLLKGSVAISFGGNGEPAAF 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINS+VKR LIST+ +ILN+KLSVPPARFFLKVHDTTAGRP+SKL
Sbjct: 61  AEVVSMGGINSQVKRNLISTIAAILNDKLSVPPARFFLKVHDTTAGRPISKL 112

[Close]

BLAST of Lcy04g008560 vs. NCBI nr
Match: XP_022949815.1 (macrophage migration inhibitory factor homolog [Cucurbita moschata] >XP_023543101.1 macrophage migration inhibitory factor homolog [Cucurbita pepo subsp. pepo] >KAG6603558.1 hypothetical protein SDJN03_04167, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033748.1 hypothetical protein SDJN02_03473, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 193.0 bits (489), Expect = 1.4e-45
Identity = 99/112 (88.39%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MPCLYISTNVDLAG DS+AIF ATT+AVSSIIGKPE +VMVLLKGSV ISFGGN EPA F
Sbjct: 1   MPCLYISTNVDLAGADSAAIFAATTSAVSSIIGKPENYVMVLLKGSVAISFGGNKEPAAF 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AEVVSMGGINSEVKR+LI+T+GSIL EKLSVPPARFFLKVHDTTAGRPVSKL
Sbjct: 61  AEVVSMGGINSEVKRRLIATIGSILKEKLSVPPARFFLKVHDTTAGRPVSKL 112

[Close]

BLAST of Lcy04g008560 vs. TAIR 10
Match: AT5G01650.1 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 9.8e-29
Identity = 58/103 (56.31%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MPCL +STNV+L GVD+S+I +  ++ V+ IIGKPE +VM++LKGSVP+SFGG  +PA +
Sbjct: 1   MPCLNLSTNVNLDGVDTSSILSEASSTVAKIIGKPENYVMIVLKGSVPMSFGGTEDPAAY 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDT 104
            E+VS+GG+N++V +KL + + +IL  KLSVP +RFFLK +DT
Sbjct: 61  GELVSIGGLNADVNKKLSAAVSAILETKLSVPKSRFFLKFYDT 103

[Close]

BLAST of Lcy04g008560 vs. TAIR 10
Match: AT5G01650.2 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 9.8e-29
Identity = 58/103 (56.31%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MPCL +STNV+L GVD+S+I +  ++ V+ IIGKPE +VM++LKGSVP+SFGG  +PA +
Sbjct: 1   MPCLNLSTNVNLDGVDTSSILSEASSTVAKIIGKPENYVMIVLKGSVPMSFGGTEDPAAY 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDT 104
            E+VS+GG+N++V +KL + + +IL  KLSVP +RFFLK +DT
Sbjct: 61  GELVSIGGLNADVNKKLSAAVSAILETKLSVPKSRFFLKFYDT 103

[Close]

BLAST of Lcy04g008560 vs. TAIR 10
Match: AT3G51660.1 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 1.4e-27
Identity = 61/112 (54.46%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MPCLYI+TNV+  GV++   ++  T AV+SI+G+P+  VMV+LKGSV I FGGN E A +
Sbjct: 1   MPCLYITTNVNFDGVNTDPFYSEVTKAVASIVGRPQNLVMVVLKGSVEIVFGGNKEAAAY 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDTTAGRPVSKL 113
           AE+VSMGGI  +VKR+LI+T+GSIL+   S+ P RF  KV D  +    SKL
Sbjct: 61  AEIVSMGGITKQVKRELIATVGSILHTHFSIHPTRFIFKVFDINSLPLPSKL 112

[Close]

BLAST of Lcy04g008560 vs. TAIR 10
Match: AT5G57170.2 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 3.2e-19
Identity = 50/112 (44.64%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MP L + TN+ +  V  S I    T AV+ IIGKPE +VM+LL   VPI+F G  EPA +
Sbjct: 1   MPTLNLFTNIPVDAVTCSDILKDATKAVAKIIGKPESYVMILLNSGVPIAFAGTEEPAAY 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDTTAGRPVSKL 113
            E++S+GG+   V  KL  T+  IL  KLS+  +RF++K +D+    PVS L
Sbjct: 61  GELISIGGLGPGVNGKLSETISEILQIKLSIDSSRFYIKFYDS----PVSPL 108

[Close]

BLAST of Lcy04g008560 vs. TAIR 10
Match: AT5G57170.1 (Tautomerase/MIF superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 7.1e-19
Identity = 46/103 (44.66%), Postives = 65/103 (63.11%), Query Frame = 0


Query: 1   MPCLYISTNVDLAGVDSSAIFTATTTAVSSIIGKPEKFVMVLLKGSVPISFGGNGEPAVF 60
           MP L + TN+ +  V  S I    T AV+ IIGKPE +VM+LL   VPI+F G  EPA +
Sbjct: 1   MPTLNLFTNIPVDAVTCSDILKDATKAVAKIIGKPESYVMILLNSGVPIAFAGTEEPAAY 60

Query: 61  AEVVSMGGINSEVKRKLISTLGSILNEKLSVPPARFFLKVHDT 104
            E++S+GG+   V  KL  T+  IL  KLS+  +RF++K +D+
Sbjct: 61  GELISIGGLGPGVNGKLSETISEILQIKLSIDSSRFYIKFYDS 103

The following BLAST results are available for this feature:

BLAST of Lcy04g008560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P81748	5.5e-08	32.35	Macrophage migration inhibitory factor homolog OS=Trichuris trichiura OX=36087 P...	[more]
P81529	2.7e-07	32.65	Macrophage migration inhibitory factor homolog OS=Trichinella spiralis OX=6334 P...	[more]
P91850	2.5e-05	27.62	Macrophage migration inhibitory factor homolog OS=Brugia malayi OX=6279 GN=Bm1_2...	[more]
P80177	5.7e-05	27.62	Macrophage migration inhibitory factor OS=Bos taurus OX=9913 GN=MIF PE=1 SV=6	[more]
Q1ZZU7	5.7e-05	27.62	Macrophage migration inhibitory factor OS=Ovis aries OX=9940 GN=MIF PE=3 SV=1	[more]

BLAST of Lcy04g008560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CL09	6.6e-49	91.96	macrophage migration inhibitory factor homolog OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0L1F7	7.3e-48	90.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314440 PE=3 SV=1	[more]
A0A6J1CQN7	2.4e-46	87.50	macrophage migration inhibitory factor homolog OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1GDU8	6.9e-46	88.39	macrophage migration inhibitory factor homolog OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1IKS8	4.4e-45	87.50	macrophage migration inhibitory factor homolog OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of Lcy04g008560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883562.1	1.4e-48	91.96	macrophage migration inhibitory factor homolog [Benincasa hispida]	[more]
XP_008464238.1	1.4e-48	91.96	PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo]	[more]
XP_004148599.1	1.5e-47	90.18	macrophage migration inhibitory factor homolog [Cucumis sativus]	[more]
XP_022144090.1	4.9e-46	87.50	macrophage migration inhibitory factor homolog [Momordica charantia]	[more]
XP_022949815.1	1.4e-45	88.39	macrophage migration inhibitory factor homolog [Cucurbita moschata] >XP_02354310...	[more]

BLAST of Lcy04g008560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01650.1	9.8e-29	56.31	Tautomerase/MIF superfamily protein	[more]
AT5G01650.2	9.8e-29	56.31	Tautomerase/MIF superfamily protein	[more]
AT3G51660.1	1.4e-27	54.46	Tautomerase/MIF superfamily protein	[more]
AT5G57170.2	3.2e-19	44.64	Tautomerase/MIF superfamily protein	[more]
AT5G57170.1	7.1e-19	44.66	Tautomerase/MIF superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001398	Macrophage migration inhibitory factor	PFAM	PF01187	MIF	coord: 2..105 e-value: 3.7E-11 score: 43.3
IPR001398	Macrophage migration inhibitory factor	PANTHER	PTHR11954	D-DOPACHROME DECARBOXYLASE	coord: 1..112
IPR014347	Tautomerase/MIF superfamily	GENE3D	3.30.429.10	Macrophage Migration Inhibitory Factor	coord: 2..107 e-value: 3.0E-31 score: 110.2
IPR014347	Tautomerase/MIF superfamily	SUPERFAMILY	55331	Tautomerase/MIF	coord: 1..104
None	No IPR available	PANTHER	PTHR11954:SF25	LS1-LIKE PROTEIN	coord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g008560.1	Lcy04g008560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005615	extracellular space
molecular_function	GO:0050178	phenylpyruvate tautomerase activity