Lcy04g007680 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g007680
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	B3 domain-containing protein
Location	Chr04: 38390543 .. 38391626 (+)
RNA-Seq Expression	Lcy04g007680
Synteny	Lcy04g007680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACACACAAATTTTCACTCAAACTTCTTGGAAATGGACGACGATACCGATTCCGGCTCTGAATCTTCCTTCGGCGACACAGACGAAGCCGGCGACGACACCAACCTATCTTCGCACAATGATGACAGCGAAGGCTCCGATGTTGCCAGTGAGGAGGTGGTGGACATCATCAATGTAAGCGACGACGGAACGACGGCGGAAGGAGGAGGAGGAGGAAGCGAGAAATCGGTGGAGATGGAAGAACAAGAAAGCAGACTTACCGAAACGGAGATCGAAGAACAAAAGGACGTTTCGATGAAAGATTCAGCAAAACCGGAATCCTCCTCGGCCGCCGCCGCCACCTTAGAAAATCAAGAATCCTCCGAATCGTACGGCGAGGAGGAAACAGAGCCTGGAGTCTTGCAAAACCTTCCGCTGAAATCGATGGAGATCGAAGAACGAAAGGACGTTCCGATGAAAGAATCGACAAAACCGGAATCCTCCTCGGCCGCCGCCGCCGCAGAAGATCAAGAATCCCCTGACTCGGACGGCGACCAAGAAACAGAGCCTGTAGTCTTCCGAAACCTGCCGCCGAACTTCCCCACGCGATTCACGACACTGATCGAAGATCCGGAGTCGATTCGTCCTCGGATCTTGATCGAGAAGCGATTGCGGCAAGCGAACGTCGATTTGACTCGGGATCGATTGCCGATTTCGGCGAAGAAGATGAAGGAGACGTTCTTGGTGCCGGATGAAGAGACGAGGTTAAAATCCGGCGACGTTATGGAGGTGAACGTGATCGAGCCGGAGGGCAGAGCAGTGAGTTTGTTGACATTGCGACGGCGAAGGCGGCGGCGGAAGACGTACGAGCTCATCGACGGGTGGAATTATGTGGTGGCGCGTAACATTAACGCGCTGAAGGCGGGAGAACTTGTTAGGGTTTGGTATTTTCGCGTCAAGGGCGAGCTCTGGTTTGCGCTTGAAGTTCTTGGAGACGAGCAGAAAGATTCTGAAATTTCGAAGCAACTGGTTGATAAATGGTACGGACAGAAAGTCTTTTTCCCTTAGTTTTTGTTTGCTCTGTGAATTGAATTTTGTGAATAAAT

mRNA sequence

AACACACAAATTTTCACTCAAACTTCTTGGAAATGGACGACGATACCGATTCCGGCTCTGAATCTTCCTTCGGCGACACAGACGAAGCCGGCGACGACACCAACCTATCTTCGCACAATGATGACAGCGAAGGCTCCGATGTTGCCAGTGAGGAGGTGGTGGACATCATCAATGTAAGCGACGACGGAACGACGGCGGAAGGAGGAGGAGGAGGAAGCGAGAAATCGGTGGAGATGGAAGAACAAGAAAGCAGACTTACCGAAACGGAGATCGAAGAACAAAAGGACGTTTCGATGAAAGATTCAGCAAAACCGGAATCCTCCTCGGCCGCCGCCGCCACCTTAGAAAATCAAGAATCCTCCGAATCGTACGGCGAGGAGGAAACAGAGCCTGGAGTCTTGCAAAACCTTCCGCTGAAATCGATGGAGATCGAAGAACGAAAGGACGTTCCGATGAAAGAATCGACAAAACCGGAATCCTCCTCGGCCGCCGCCGCCGCAGAAGATCAAGAATCCCCTGACTCGGACGGCGACCAAGAAACAGAGCCTGTAGTCTTCCGAAACCTGCCGCCGAACTTCCCCACGCGATTCACGACACTGATCGAAGATCCGGAGTCGATTCGTCCTCGGATCTTGATCGAGAAGCGATTGCGGCAAGCGAACGTCGATTTGACTCGGGATCGATTGCCGATTTCGGCGAAGAAGATGAAGGAGACGTTCTTGGTGCCGGATGAAGAGACGAGGTTAAAATCCGGCGACGTTATGGAGGTGAACGTGATCGAGCCGGAGGGCAGAGCAGTGAGTTTGTTGACATTGCGACGGCGAAGGCGGCGGCGGAAGACGTACGAGCTCATCGACGGGTGGAATTATGTGGTGGCGCGTAACATTAACGCGCTGAAGGCGGGAGAACTTGTTAGGGTTTGGTATTTTCGCGTCAAGGGCGAGCTCTGGTTTGCGCTTGAAGTTCTTGGAGACGAGCAGAAAGATTCTGAAATTTCGAAGCAACTGGTTGATAAATGGTACGGACAGAAAGTCTTTTTCCCTTAGTTTTTGTTTGCTCTGTGAATTGAATTTTGTGAATAAAT

Coding sequence (CDS)

ATGGACGACGATACCGATTCCGGCTCTGAATCTTCCTTCGGCGACACAGACGAAGCCGGCGACGACACCAACCTATCTTCGCACAATGATGACAGCGAAGGCTCCGATGTTGCCAGTGAGGAGGTGGTGGACATCATCAATGTAAGCGACGACGGAACGACGGCGGAAGGAGGAGGAGGAGGAAGCGAGAAATCGGTGGAGATGGAAGAACAAGAAAGCAGACTTACCGAAACGGAGATCGAAGAACAAAAGGACGTTTCGATGAAAGATTCAGCAAAACCGGAATCCTCCTCGGCCGCCGCCGCCACCTTAGAAAATCAAGAATCCTCCGAATCGTACGGCGAGGAGGAAACAGAGCCTGGAGTCTTGCAAAACCTTCCGCTGAAATCGATGGAGATCGAAGAACGAAAGGACGTTCCGATGAAAGAATCGACAAAACCGGAATCCTCCTCGGCCGCCGCCGCCGCAGAAGATCAAGAATCCCCTGACTCGGACGGCGACCAAGAAACAGAGCCTGTAGTCTTCCGAAACCTGCCGCCGAACTTCCCCACGCGATTCACGACACTGATCGAAGATCCGGAGTCGATTCGTCCTCGGATCTTGATCGAGAAGCGATTGCGGCAAGCGAACGTCGATTTGACTCGGGATCGATTGCCGATTTCGGCGAAGAAGATGAAGGAGACGTTCTTGGTGCCGGATGAAGAGACGAGGTTAAAATCCGGCGACGTTATGGAGGTGAACGTGATCGAGCCGGAGGGCAGAGCAGTGAGTTTGTTGACATTGCGACGGCGAAGGCGGCGGCGGAAGACGTACGAGCTCATCGACGGGTGGAATTATGTGGTGGCGCGTAACATTAACGCGCTGAAGGCGGGAGAACTTGTTAGGGTTTGGTATTTTCGCGTCAAGGGCGAGCTCTGGTTTGCGCTTGAAGTTCTTGGAGACGAGCAGAAAGATTCTGAAATTTCGAAGCAACTGGTTGATAAATGGTACGGACAGAAAGTCTTTTTCCCTTAG

Protein sequence

MDDDTDSGSESSFGDTDEAGDDTNLSSHNDDSEGSDVASEEVVDIINVSDDGTTAEGGGGGSEKSVEMEEQESRLTETEIEEQKDVSMKDSAKPESSSAAAATLENQESSESYGEEETEPGVLQNLPLKSMEIEERKDVPMKESTKPESSSAAAAAEDQESPDSDGDQETEPVVFRNLPPNFPTRFTTLIEDPESIRPRILIEKRLRQANVDLTRDRLPISAKKMKETFLVPDEETRLKSGDVMEVNVIEPEGRAVSLLTLRRRRRRRKTYELIDGWNYVVARNINALKAGELVRVWYFRVKGELWFALEVLGDEQKDSEISKQLVDKWYGQKVFFP

Homology

[Close]

BLAST of Lcy04g007680 vs. ExPASy TrEMBL
Match: A0A6J1DRC9 (VID27-like protein OS=Momordica charantia OX=3673 GN=LOC111023136 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 2.8e-42
Identity = 129/294 (43.88%), Postives = 170/294 (57.82%), Query Frame = 0


Query: 77  ETEIEEQKDVSMKDSAKPESSSAAAATLENQESSESYGEEETEPG--------------- 136
           ET  +E +D +    +  ES + A    EN E  +   EE  +                 
Sbjct: 12  ETTDDESRDDNPPTYSPAESVNGALRREENDEEDDGEEEENGDGDGDGDDELDEDEEVDI 71

Query: 137 --VLQNLPLKSMEIEERKDVPMKESTKPES------SSAAAAAEDQESPDSDGDQ-ETEP 196
             V Q +   +MEIEE KDV M+E+T+ ES      S+AA AA DQ+S +SDG++ ETE 
Sbjct: 72  MTVDQEITDAAMEIEEEKDVSMEETTQSESSFSAAASAAAFAAVDQDSSESDGEESETES 131

Query: 197 VVFRNLPPNFPTRFTTLIEDPESIRPRILIEKRLRQANVDLTRDRLPISAKKMKETFLVP 256
            +  N PPNFP  FT  + DP SIRPRIL+EK+LR+++VD  R+RL I AKK+KE FL+ 
Sbjct: 132 QISHNFPPNFPLEFTKRLVDPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLL 191

Query: 257 DEETRLKSGDVMEVNVIEPEGRAVSLLTLRRRR---RRRKTYELIDGWNYVVARNINALK 316
           DEE R+ +G+ MEV VIEP+   VS +TLRRRR    +  +Y L   W+ VVARN +ALK
Sbjct: 192 DEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLTGQWSQVVARNSDALK 251

Query: 317 AGELVRVWYFR-----VKGELWFALEVL-GDEQKDSEISKQLVDKWYGQKVFFP 338
            G  VRVWYF      V   L FA+EV    +  D E  K+L  KW+GQ +F P
Sbjct: 252 RGRRVRVWYFHDGDGDVGLRLCFAIEVFESGKGGDGEFVKELTQKWWGQNIFTP 305

[Close]

BLAST of Lcy04g007680 vs. ExPASy TrEMBL
Match: A0A6J1GF95 (B3 domain-containing protein At2g31420-like OS=Cucurbita moschata OX=3662 GN=LOC111453649 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.9e-08
Identity = 50/136 (36.76%), Postives = 75/136 (55.15%), Query Frame = 0


Query: 169 ETEPVVFRNLPPNFPTRFTTLIEDPESIRPRILIEKRLRQANVDLTRDRLPISAKKMKET 228
           E + ++   LP N+ +    +    +S  P  L++KRL++ +VD  R+RL I  +KM+  
Sbjct: 114 EFDRILADGLPQNYKSLMIFMGASSKS-SPNFLLQKRLKKGDVDERRNRLVIPQRKMRNN 173

Query: 229 FLVPDEETRLKSGDVMEVNVIEPEGRAVSLLTLRR-RRRRRKTYELIDGWNYVVARNINA 288
           FL  +EE +L       V VIEP+  +VSL+TL +        Y  I  WN +V R  N 
Sbjct: 174 FLDLEEEEKLNMERWWIVEVIEPD-CSVSLMTLSKWETPSGAAYVFITEWNGLVER--NE 233

Query: 289 LKAGELVRVWYFRVKG 304
           LK G+LV++W FRV G
Sbjct: 234 LKEGDLVQLWSFRVHG 245

[Close]

BLAST of Lcy04g007680 vs. ExPASy TrEMBL
Match: A0A6J1ITM1 (uncharacterized protein LOC111478299 OS=Cucurbita maxima OX=3661 GN=LOC111478299 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.7e-08
Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 0


Query: 198 PRILIEKRLRQANVDLTRDRLPISAKKMKETFLVPDEETRLKSGDVMEVNVIEPEGRAVS 257
           P  L++KRL++ +VD  R+RL I  +KM+  FL  +EE +L       V VIEP+  +VS
Sbjct: 144 PSFLLQKRLKKGDVDERRNRLVIPQRKMRNNFLDLEEEEKLNMERWWMVEVIEPD-CSVS 203

Query: 258 LLTLRR-RRRRRKTYELIDGWNYVVARNINALKAGELVRVWYFRVKGE-----LWFALEV 317
           L+TL +        Y  I  WN +V R  N LK G+L+++W FRV G       +  LE+
Sbjct: 204 LMTLSKWETPSGAAYVFITEWNGLVER--NELKEGDLIQLWSFRVHGGDHGRLCFMLLEI 263

Query: 318 LGDEQKDS 320
              ++ DS
Sbjct: 264 CEGDETDS 268

[Close]

BLAST of Lcy04g007680 vs. ExPASy TrEMBL
Match: A0A438E325 (B3 domain-containing protein OS=Vitis vinifera OX=29760 GN=VvCHDh000672_6 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-07
Identity = 62/199 (31.16%), Postives = 95/199 (47.74%), Query Frame = 0


Query: 132 EIEERKDVPMKESTKPESS--SAAAAAEDQESPDSDGDQETEPVVFRNLPPNFPTRFTTL 191
           E +E ++  M+E  +   S  S AA    +  P        EP      PP  P RF   
Sbjct: 34  EEDEEREKKMREEMEKAVSFLSLAAKKHCKTVPRPYQQPNMEP------PPEMPERFRRK 93

Query: 192 IEDPESIRPRILIEKRLRQANVDLTRDRLPISAKKMKETFLVPDEETRLKSGDV----ME 251
           I +        +IEK L + +V    +RL +   ++++ F+  +E  RL S D     +E
Sbjct: 94  IMEMGGENVAFVIEKMLFETDVSAGHNRLSMPMCQIRQDFVTKEERRRLDSTDANINGVE 153

Query: 252 VNVIEPEGRAVSLLTLRRRRRRRK-TYELIDGWNYVVARNINALKAGELVRVWYFRVKGE 311
           V ++EP      ++  + + +R    Y LI  WN VV R  N L AG++VRVW FRV  +
Sbjct: 154 VILVEPSLEDDEVMLKKWKMKRNSILYVLIKNWNSVVKR--NGLGAGDVVRVWSFRVGSK 213

Query: 312 LWFALEVLGDEQKDSEISK 324
           L FAL  +GDE+ + +  K
Sbjct: 214 LGFALVRVGDEEHEGKKGK 224

[Close]

BLAST of Lcy04g007680 vs. ExPASy TrEMBL
Match: A0A438IZ22 (B3 domain-containing protein OS=Vitis vinifera OX=29760 GN=VvCHDp000758_5 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-07
Identity = 62/199 (31.16%), Postives = 95/199 (47.74%), Query Frame = 0


Query: 132 EIEERKDVPMKESTKPESS--SAAAAAEDQESPDSDGDQETEPVVFRNLPPNFPTRFTTL 191
           E +E ++  M+E  +   S  S AA    +  P        EP      PP  P RF   
Sbjct: 34  EEDEEREKKMREEMEKAVSFLSLAAKKHCKTVPRPYQQPNMEP------PPEMPERFRRK 93

Query: 192 IEDPESIRPRILIEKRLRQANVDLTRDRLPISAKKMKETFLVPDEETRLKSGDV----ME 251
           I +        +IEK L + +V    +RL +   ++++ F+  +E  RL S D     +E
Sbjct: 94  IMEMGGENVAFVIEKMLFETDVSAGHNRLSMPMCQIRQDFVTEEERRRLDSTDANINGVE 153

Query: 252 VNVIEPEGRAVSLLTLRRRRRRRK-TYELIDGWNYVVARNINALKAGELVRVWYFRVKGE 311
           V ++EP      ++  + + +R    Y LI  WN VV R  N L AG++VRVW FRV  +
Sbjct: 154 VILVEPSLEDDEVMLKKWKMKRNSILYVLIKNWNSVVKR--NGLGAGDVVRVWSFRVGSK 213

Query: 312 LWFALEVLGDEQKDSEISK 324
           L FAL  +GDE+ + +  K
Sbjct: 214 LGFALVRVGDEEHEGKKGK 224

[Close]

BLAST of Lcy04g007680 vs. NCBI nr
Match: XP_022156187.1 (VID27-like protein [Momordica charantia])

HSP 1 Score: 182.6 bits (462), Expect = 5.8e-42
Identity = 129/294 (43.88%), Postives = 170/294 (57.82%), Query Frame = 0


Query: 77  ETEIEEQKDVSMKDSAKPESSSAAAATLENQESSESYGEEETEPG--------------- 136
           ET  +E +D +    +  ES + A    EN E  +   EE  +                 
Sbjct: 12  ETTDDESRDDNPPTYSPAESVNGALRREENDEEDDGEEEENGDGDGDGDDELDEDEEVDI 71

Query: 137 --VLQNLPLKSMEIEERKDVPMKESTKPES------SSAAAAAEDQESPDSDGDQ-ETEP 196
             V Q +   +MEIEE KDV M+E+T+ ES      S+AA AA DQ+S +SDG++ ETE 
Sbjct: 72  MTVDQEITDAAMEIEEEKDVSMEETTQSESSFSAAASAAAFAAVDQDSSESDGEESETES 131

Query: 197 VVFRNLPPNFPTRFTTLIEDPESIRPRILIEKRLRQANVDLTRDRLPISAKKMKETFLVP 256
            +  N PPNFP  FT  + DP SIRPRIL+EK+LR+++VD  R+RL I AKK+KE FL+ 
Sbjct: 132 QISHNFPPNFPLEFTKRLVDPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLL 191

Query: 257 DEETRLKSGDVMEVNVIEPEGRAVSLLTLRRRR---RRRKTYELIDGWNYVVARNINALK 316
           DEE R+ +G+ MEV VIEP+   VS +TLRRRR    +  +Y L   W+ VVARN +ALK
Sbjct: 192 DEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLTGQWSQVVARNSDALK 251

Query: 317 AGELVRVWYFR-----VKGELWFALEVL-GDEQKDSEISKQLVDKWYGQKVFFP 338
            G  VRVWYF      V   L FA+EV    +  D E  K+L  KW+GQ +F P
Sbjct: 252 RGRRVRVWYFHDGDGDVGLRLCFAIEVFESGKGGDGEFVKELTQKWWGQNIFTP 305

[Close]

BLAST of Lcy04g007680 vs. NCBI nr
Match: KAG8648154.1 (hypothetical protein MANES_09G155401v8, partial [Manihot esculenta])

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-08
Identity = 40/130 (30.77%), Postives = 68/130 (52.31%), Query Frame = 0


Query: 179 PPNFPTRFTTLIEDPESIRPRILIEKRLRQANVDLTRDRLPISAKKMKETFLVPDEETRL 238
           PP  P  +   IE    +  +++I K+L   +++   DRL I  K++K  FL  DE+ +L
Sbjct: 91  PPELPNEWMDKIEKQGGVDVKLVIMKQLFPTDLNPHHDRLSIPFKQIKNEFLTEDEKIKL 150

Query: 239 KSGDVMEVNVIEPEGRAVSLLTLRRRRRRRKTYELIDGWNYVVARNINALKAGELVRVWY 298
              +++ V ++EP G    +   +   R    Y L   W  V+ RN+   K  +++++W 
Sbjct: 151 NQQEIIAVKLMEPCGNVSEMYLRQWNLRSTSFYALTTRWKKVLERNLE-FKQNDIIQLWS 210

Query: 299 FRVKGELWFA 309
           FRV+GEL FA
Sbjct: 211 FRVRGELQFA 219

[Close]

BLAST of Lcy04g007680 vs. NCBI nr
Match: KAA0060117.1 (B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 68.9 bits (167), Expect = 9.3e-08
Identity = 50/145 (34.48%), Postives = 80/145 (55.17%), Query Frame = 0


Query: 169 ETEPVVFRNLPPNFPTRFTTLIEDPESIRPRILIEKRLRQANVDLTRDRLPISAKKMKET 228
           E+E     N+P  +  +    +     + P +++EKRL++ +V+  R+RL I  +K + T
Sbjct: 8   ESEREFLENIPEEY-KKLMIFMGGSWDVCPSLVMEKRLKKGDVEERRNRLLIPQRKTRTT 67

Query: 229 FLVPDEETRLKSGDVMEVNVIEPEGRAVSLLTLRR-RRRRRKTYELIDGWNYVVARNINA 288
           FL  +EE +L +     V +IEP+   VSL+TL +   R+   Y LI  WN +V R  N 
Sbjct: 68  FLEVEEEEKLNTDVWWMVEIIEPD-CTVSLITLSKWETRKGVAYVLITEWNGLVER--ND 127

Query: 289 LKAGELVRVWYFRV---KGELWFAL 310
           LK G+L+++W FR    +G L F L
Sbjct: 128 LKEGDLMQLWSFRAGGGRGRLCFML 148

[Close]

BLAST of Lcy04g007680 vs. NCBI nr
Match: KAG7033674.1 (B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-07
Identity = 50/136 (36.76%), Postives = 75/136 (55.15%), Query Frame = 0


Query: 169 ETEPVVFRNLPPNFPTRFTTLIEDPESIRPRILIEKRLRQANVDLTRDRLPISAKKMKET 228
           E + ++   LP N+ +    +    +S  P  L++KRL++ +VD  R+RL I  +KM+  
Sbjct: 114 EFDRILADGLPQNYKSLMIFMGASSKS-SPNFLLQKRLKKGDVDERRNRLVIPQRKMRNN 173

Query: 229 FLVPDEETRLKSGDVMEVNVIEPEGRAVSLLTLRR-RRRRRKTYELIDGWNYVVARNINA 288
           FL  +EE +L       V VIEP+  +VSL+TL +        Y  I  WN +V R  N 
Sbjct: 174 FLDLEEEEKLNMERWWIVEVIEPD-CSVSLMTLSKWETPSGAAYVFITEWNGLVER--NE 233

Query: 289 LKAGELVRVWYFRVKG 304
           LK G+LV++W FRV G
Sbjct: 234 LKEGDLVQLWSFRVHG 245

[Close]

BLAST of Lcy04g007680 vs. NCBI nr
Match: XP_022950597.1 (B3 domain-containing protein At2g31420-like [Cucurbita moschata])

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-07
Identity = 50/136 (36.76%), Postives = 75/136 (55.15%), Query Frame = 0


Query: 169 ETEPVVFRNLPPNFPTRFTTLIEDPESIRPRILIEKRLRQANVDLTRDRLPISAKKMKET 228
           E + ++   LP N+ +    +    +S  P  L++KRL++ +VD  R+RL I  +KM+  
Sbjct: 114 EFDRILADGLPQNYKSLMIFMGASSKS-SPNFLLQKRLKKGDVDERRNRLVIPQRKMRNN 173

Query: 229 FLVPDEETRLKSGDVMEVNVIEPEGRAVSLLTLRR-RRRRRKTYELIDGWNYVVARNINA 288
           FL  +EE +L       V VIEP+  +VSL+TL +        Y  I  WN +V R  N 
Sbjct: 174 FLDLEEEEKLNMERWWIVEVIEPD-CSVSLMTLSKWETPSGAAYVFITEWNGLVER--NE 233

Query: 289 LKAGELVRVWYFRVKG 304
           LK G+LV++W FRV G
Sbjct: 234 LKEGDLVQLWSFRVHG 245

The following BLAST results are available for this feature:

BLAST of Lcy04g007680 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy04g007680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DRC9	2.8e-42	43.88	VID27-like protein OS=Momordica charantia OX=3673 GN=LOC111023136 PE=4 SV=1	[more]
A0A6J1GF95	5.9e-08	36.76	B3 domain-containing protein At2g31420-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1ITM1	7.7e-08	37.50	uncharacterized protein LOC111478299 OS=Cucurbita maxima OX=3661 GN=LOC111478299...	[more]
A0A438E325	1.0e-07	31.16	B3 domain-containing protein OS=Vitis vinifera OX=29760 GN=VvCHDh000672_6 PE=4 S...	[more]
A0A438IZ22	1.0e-07	31.16	B3 domain-containing protein OS=Vitis vinifera OX=29760 GN=VvCHDp000758_5 PE=4 S...	[more]

BLAST of Lcy04g007680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156187.1	5.8e-42	43.88	VID27-like protein [Momordica charantia]	[more]
KAG8648154.1	1.4e-08	30.77	hypothetical protein MANES_09G155401v8, partial [Manihot esculenta]	[more]
KAA0060117.1	9.3e-08	34.48	B3 domain-containing protein [Cucumis melo var. makuwa]	[more]
KAG7033674.1	1.2e-07	36.76	B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022950597.1	1.2e-07	36.76	B3 domain-containing protein At2g31420-like [Cucurbita moschata]	[more]

BLAST of Lcy04g007680 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005508	B3 domain-containing protein At2g31720-like	PFAM	PF03754	DUF313	coord: 196..282 e-value: 7.1E-6 score: 26.2
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 67..318
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 199..325 e-value: 7.7E-7 score: 31.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	PANTHER	PTHR31541:SF25	DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED	coord: 67..318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g007680.1	Lcy04g007680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding