Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGGAGAAAAGGTATTGATGAAAAGGAGGTGAGTAGAATGGCATCGAGGTGGGGGTATGACTCAGGAACATGGCCGTTATCCTACCTAGGTGTTCCTCTAGGAGGAAATCCTAGATGTGAGGCTTTTTGGGCCCCAATGGAGGAGAAGGTGAGAACTGGGCTCACAAAGTGGAAGAGTTTTGTTTGCTCTGGAGGGGGGAGGCTCAGACTTGGGAAAGTTGTCCTTTCCAGTATTCCTTTTAATTACTTCTCCATCTTTGAATGCCCAATCAAAGTTATTAGAAGGTTGGAAAAGCTAATCAAAGACTTTTTATGGAAAGGAGTAGGGGTGAGCACAAAAGACCGAAAAACCGAGCCAACCGACTGAAACCGATGTTGGTCGGTCGGTTTTTTGACAACATCGGTCGGGGTCGATTTTGCAGTATGCAAAACCGATCTGTCAGTCGATCGGCTCGTTTAAAATGATGAGAACCGACCAAACCGACCGACTTATGTTACTAAAATTAAAAAAAAAAAAAACAAATAAAAAAGTAAAGAAAGGACGCTGGCGTGTGTATGGGGAAGGGTGCGAAAAGAAAGTTTTCACATTTTTCAGATATAGGTAAGAGGTAATGATTATACCTACTATGTAGGTATAATTATTACCTCTTTAAAATTAAAAAAAAAAATTCTTTATTATTTTATTTTTTTTCTTACGGATTTGTCTTCTCTTTCTCAAGCTCTCTCTTCTCTATTTTCACTTTCTCTCTTCCTCCTCCTCTCTTTTCTCTCTTTTTCAAACTTTCTATTATATTTTGCTTTGCTGGATTTTGTTCGTTGAAGTTCAGTCAACACGAACTAGTAACGCAAACTGAAACTCATAGAAGACCACTTTTTTTCTTTCCCCCTTCTCCCTCTCTCTTTCTCCTATTTTTTCTTCTCTTTCTCTCCAATCTCTTTTTTCATGAGAAATTTTTTTCGTCGAGTTCAATACCACCATCACCGACCAGTCACTCTTCTTTTTTTAATAGATCCGGTGAACTTCCAAAACCAACCGATTTTTTCATGAGGTCGGTCGGTCGATTTCATAAACACTCCCAAAACCGACTATCACCGACCGACTAAAACCGACATGTCGGTGGTCGGCGTCGGTTTGGGTACAAAACCGACATCGACCGGCCGATGATCACCCCTAGAAAGGAGTAGCTAATGAAAAGGGCAGAAACCTTGTTAATTGGAAGATTACCTCATTGCCAGTGAACAAAGGTGGCCTAGGTGTTGGCAACTTGCAAGGCAAGAATATAAGCTTGCTAGCGAAATGGGGATGGTGGTTTATGAATGAGAAGAGTGCATTGTGGAGAACAGTAGTAGCTAGTAAATACTCTTTCTCCGATGGAGATTGGCTTCCCAATTCAGGTGGTGACAAAAAAGTTAAAGGGCCATGGAGACAGACTGCTAATTGCTGTGAGACAGTGGATAAATGGTACAAAATGAGGCTCGGTAGAGGTGATAAAATCTTCGTTTGGGAGGATCATTTGATAGGTGATGCCTGTCTTGAAAATACTTTCAGTAGACTTTACAATGTAGCCGATTCTAAGGGGTTTAAAGTGGAACTTTACTGGTCAGAAGAATTGATGTCTTGGGATTTGTAG
mRNA sequence
ATGAAGAGGAGAAAAGGTATTGATGAAAAGGAGGTGAGTAGAATGGCATCGAGGTGGGGGTATGACTCAGGAACATGGCCGTTATCCTACCTAGGTGTTCCTCTAGGAGGAAATCCTAGATGTGAGGCTTTTTGGGCCCCAATGGAGGAGAAGGTGAGAACTGGGCTCACAAAGTGGAAGAGTTTTGTTTGCTCTGGAGGGGGGAGGCTCAGACTTGGGAAAGTTGTCCTTTCCATGAACAAAGGTGGCCTAGGTGTTGGCAACTTGCAAGGCAAGAATATAAGCTTGCTAGCGAAATGGGGATGGTGGTTTATGAATGAGAAGAGTGCATTGTGGAGAACAGTAGTAGCTAGTAAATACTCTTTCTCCGATGGAGATTGGCTTCCCAATTCAGGTGGTGACAAAAAAGTTAAAGGGCCATGGAGACAGACTGCTAATTGCTGTGAGACAGTGGATAAATGGTACAAAATGAGGCTCGGTAGAGGTGATAAAATCTTCGTTTGGGAGGATCATTTGATAGGTGATGCCTGTCTTGAAAATACTTTCAGTAGACTTTACAATGTAGCCGATTCTAAGGGGTTTAAAGTGGAACTTTACTGGTCAGAAGAATTGATGTCTTGGGATTTGTAG
Coding sequence (CDS)
ATGAAGAGGAGAAAAGGTATTGATGAAAAGGAGGTGAGTAGAATGGCATCGAGGTGGGGGTATGACTCAGGAACATGGCCGTTATCCTACCTAGGTGTTCCTCTAGGAGGAAATCCTAGATGTGAGGCTTTTTGGGCCCCAATGGAGGAGAAGGTGAGAACTGGGCTCACAAAGTGGAAGAGTTTTGTTTGCTCTGGAGGGGGGAGGCTCAGACTTGGGAAAGTTGTCCTTTCCATGAACAAAGGTGGCCTAGGTGTTGGCAACTTGCAAGGCAAGAATATAAGCTTGCTAGCGAAATGGGGATGGTGGTTTATGAATGAGAAGAGTGCATTGTGGAGAACAGTAGTAGCTAGTAAATACTCTTTCTCCGATGGAGATTGGCTTCCCAATTCAGGTGGTGACAAAAAAGTTAAAGGGCCATGGAGACAGACTGCTAATTGCTGTGAGACAGTGGATAAATGGTACAAAATGAGGCTCGGTAGAGGTGATAAAATCTTCGTTTGGGAGGATCATTTGATAGGTGATGCCTGTCTTGAAAATACTTTCAGTAGACTTTACAATGTAGCCGATTCTAAGGGGTTTAAAGTGGAACTTTACTGGTCAGAAGAATTGATGTCTTGGGATTTGTAG
Protein sequence
MKRRKGIDEKEVSRMASRWGYDSGTWPLSYLGVPLGGNPRCEAFWAPMEEKVRTGLTKWKSFVCSGGGRLRLGKVVLSMNKGGLGVGNLQGKNISLLAKWGWWFMNEKSALWRTVVASKYSFSDGDWLPNSGGDKKVKGPWRQTANCCETVDKWYKMRLGRGDKIFVWEDHLIGDACLENTFSRLYNVADSKGFKVELYWSEELMSWDL
Homology
BLAST of Lcy04g006260 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 52.4 bits (124), Expect = 7.3e-06
Identity = 40/133 (30.08%), Postives = 53/133 (39.85%), Query Frame = 0
Query: 45 WAPMEEKVRTGLTKWKSFVCSGGGRLRLGKVVLSMNKGGLGVGNLQGKNISLLAKWGWWF 104
W EK + L KW S VCS +GGLGV + N +L++K GW
Sbjct: 75 WGSTAEKKKQHLVKW-SKVCS------------PKKEGGLGVRAAKSMNRALISKVGWRL 134
Query: 105 MNEKSALWRTVVASKY---SFSDGDWLPNSGGDKKVKGPWRQTA-NCCETVDKWYKMRLG 164
+ EK++LW V+ KY D WL G WR A + V G
Sbjct: 135 LQEKNSLWTLVLQKKYHVGEIRDSRWLIPKG---SWSSTWRSIAIGLRDVVSHGVGWIPG 191
Query: 165 RGDKIFVWEDHLI 174
G +I W D +
Sbjct: 195 DGQQIRFWTDRWV 191
BLAST of Lcy04g006260 vs. ExPASy TrEMBL
Match:
A0A803P465 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 135.6 bits (340), Expect = 2.4e-28
Identity = 80/240 (33.33%), Postives = 113/240 (47.08%), Query Frame = 0
Query: 7 IDEKEVSRMASRWGYDSGTWPLSYLGVPLGGNPRCEAFWAPMEEKVRTGLTKWKSFVCSG 66
+DE+ VSR+A R G + G+WPL YLG+PLGG+PR +FW P+ +K L WK S
Sbjct: 1431 MDEEIVSRLARRIGCEVGSWPLQYLGMPLGGSPRKWSFWEPVMDKCAKRLDGWKCAFLSK 1490
Query: 67 GGRLRLGKVVLS------------------------------------------------ 126
GGRL L + VLS
Sbjct: 1491 GGRLTLIQSVLSSLPLYFLSLFKAPRSVTKALEKMMRDFLWEGSESSGGEHLVAWDEVCR 1550
Query: 127 -MNKGGLGVGNLQGKNISLLAKWGWWFMNEKSALWRTVVASKYSFSDGDWLPNSGGDKKV 186
++GGLG+G L+ +N SLL KW W F E+++LW VV S+Y +D W G
Sbjct: 1551 PRHEGGLGIGRLELRNKSLLMKWLWRFPLEQNSLWHRVVVSRYGRADNLWDSKKGSRLSP 1610
Query: 187 KGPWRQTANCCETVDKWYKMRLGRGDKIFVWEDHLIGDACLENTFSRLYNVADSKGFKVE 198
KGPWR ++ + +LGRGD+I WED I D L + F L +++ + ++
Sbjct: 1611 KGPWRDISDLYDEFLGLVHFKLGRGDRIRFWEDVWIDDYPLVSAFPDLAVISEGRNTPIK 1670
BLAST of Lcy04g006260 vs. ExPASy TrEMBL
Match:
A0A4Y1R3V4 (VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_008314 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 2.7e-27
Identity = 78/252 (30.95%), Postives = 110/252 (43.65%), Query Frame = 0
Query: 7 IDEKEVSRMASRWGYDSGTWPLSYLGVPLGGNPRCEAFWAPMEEKVRTGLTKWKSFVCSG 66
+D+ V+ MA WG D G WP+ YLG+PLGGNPR FW P+ EKV L KWK S
Sbjct: 419 LDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSK 478
Query: 67 GGRLRLGKVVLS----------------MNK----------------------------- 126
GGRL + + VL N+
Sbjct: 479 GGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEGLDGKSNHAVSWEVVGKA 538
Query: 127 ---GGLGVGNLQGKNISLLAKWGWWFMNEKSALWRTVVASKYSFSDGDWLPNSGGDKKVK 186
GGLGVG+L+ ++++L AKW W F NE ALW V+ S Y W +
Sbjct: 539 KFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCR 598
Query: 187 GPWRQTANCCETVDKWYKMRLGRGDKIFVWEDHLIGDACLENTFSRLYNVADSKGFKVEL 209
PWR ++ + +G G ++ WED L+ F RL+N++ + +
Sbjct: 599 CPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNISS 658
BLAST of Lcy04g006260 vs. ExPASy TrEMBL
Match:
A0A5H2XKI7 (VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_184S000200 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 2.7e-27
Identity = 78/252 (30.95%), Postives = 110/252 (43.65%), Query Frame = 0
Query: 7 IDEKEVSRMASRWGYDSGTWPLSYLGVPLGGNPRCEAFWAPMEEKVRTGLTKWKSFVCSG 66
+D+ V+ MA WG D G WP+ YLG+PLGGNPR FW P+ EKV L KWK S
Sbjct: 1193 LDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSK 1252
Query: 67 GGRLRLGKVVLS----------------MNK----------------------------- 126
GGRL + + VL N+
Sbjct: 1253 GGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEGLDGKSNHAVSWEVVGKA 1312
Query: 127 ---GGLGVGNLQGKNISLLAKWGWWFMNEKSALWRTVVASKYSFSDGDWLPNSGGDKKVK 186
GGLGVG+L+ ++++L AKW W F NE ALW V+ S Y W +
Sbjct: 1313 KFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCR 1372
Query: 187 GPWRQTANCCETVDKWYKMRLGRGDKIFVWEDHLIGDACLENTFSRLYNVADSKGFKVEL 209
PWR ++ + +G G ++ WED L+ F RL+N++ + +
Sbjct: 1373 CPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNISS 1432
BLAST of Lcy04g006260 vs. ExPASy TrEMBL
Match:
A0A5E4FED8 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035166 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 2.7e-27
Identity = 78/252 (30.95%), Postives = 110/252 (43.65%), Query Frame = 0
Query: 7 IDEKEVSRMASRWGYDSGTWPLSYLGVPLGGNPRCEAFWAPMEEKVRTGLTKWKSFVCSG 66
+D+ V+ MA WG D G WP+ YLG+PLGGNPR FW P+ EKV L KWK S
Sbjct: 543 LDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSK 602
Query: 67 GGRLRLGKVVLS----------------MNK----------------------------- 126
GGRL + + VL N+
Sbjct: 603 GGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEGLDGKSNHAVSWEVVGKA 662
Query: 127 ---GGLGVGNLQGKNISLLAKWGWWFMNEKSALWRTVVASKYSFSDGDWLPNSGGDKKVK 186
GGLGVG+L+ ++++L AKW W F NE ALW V+ S Y W +
Sbjct: 663 KFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCR 722
Query: 187 GPWRQTANCCETVDKWYKMRLGRGDKIFVWEDHLIGDACLENTFSRLYNVADSKGFKVEL 209
PWR ++ + +G G ++ WED L+ F RL+N++ + +
Sbjct: 723 CPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNISS 782
BLAST of Lcy04g006260 vs. ExPASy TrEMBL
Match:
A0A5H2Y6K0 (VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_1151S000200 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 2.7e-27
Identity = 78/252 (30.95%), Postives = 110/252 (43.65%), Query Frame = 0
Query: 7 IDEKEVSRMASRWGYDSGTWPLSYLGVPLGGNPRCEAFWAPMEEKVRTGLTKWKSFVCSG 66
+D+ V+ MA WG D G WP+ YLG+PLGGNPR FW P+ EKV L KWK S
Sbjct: 486 LDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSK 545
Query: 67 GGRLRLGKVVLS----------------MNK----------------------------- 126
GGRL + + VL N+
Sbjct: 546 GGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEGLDGKSNHAVSWEVVGKA 605
Query: 127 ---GGLGVGNLQGKNISLLAKWGWWFMNEKSALWRTVVASKYSFSDGDWLPNSGGDKKVK 186
GGLGVG+L+ ++++L AKW W F NE ALW V+ S Y W +
Sbjct: 606 KFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCR 665
Query: 187 GPWRQTANCCETVDKWYKMRLGRGDKIFVWEDHLIGDACLENTFSRLYNVADSKGFKVEL 209
PWR ++ + +G G ++ WED L+ F RL+N++ + +
Sbjct: 666 CPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNISS 725
BLAST of Lcy04g006260 vs. NCBI nr
Match:
BBN69746.1 (VIRB2-interacting protein 2 [Prunus dulcis])
HSP 1 Score: 132.1 bits (331), Expect = 5.5e-27
Identity = 78/252 (30.95%), Postives = 110/252 (43.65%), Query Frame = 0
Query: 7 IDEKEVSRMASRWGYDSGTWPLSYLGVPLGGNPRCEAFWAPMEEKVRTGLTKWKSFVCSG 66
+D+ V+ MA WG D G WP+ YLG+PLGGNPR FW P+ EKV L KWK S
Sbjct: 486 LDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSK 545
Query: 67 GGRLRLGKVVLS----------------MNK----------------------------- 126
GGRL + + VL N+
Sbjct: 546 GGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEGLDGKSNHAVSWEVVGKA 605
Query: 127 ---GGLGVGNLQGKNISLLAKWGWWFMNEKSALWRTVVASKYSFSDGDWLPNSGGDKKVK 186
GGLGVG+L+ ++++L AKW W F NE ALW V+ S Y W +
Sbjct: 606 KFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCR 665
Query: 187 GPWRQTANCCETVDKWYKMRLGRGDKIFVWEDHLIGDACLENTFSRLYNVADSKGFKVEL 209
PWR ++ + +G G ++ WED L+ F RL+N++ + +
Sbjct: 666 CPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNISS 725
BLAST of Lcy04g006260 vs. NCBI nr
Match:
VVA25489.1 (Hypothetical predicted protein, partial [Prunus dulcis])
HSP 1 Score: 132.1 bits (331), Expect = 5.5e-27
Identity = 78/252 (30.95%), Postives = 110/252 (43.65%), Query Frame = 0
Query: 7 IDEKEVSRMASRWGYDSGTWPLSYLGVPLGGNPRCEAFWAPMEEKVRTGLTKWKSFVCSG 66
+D+ V+ MA WG D G WP+ YLG+PLGGNPR FW P+ EKV L KWK S
Sbjct: 543 LDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSK 602
Query: 67 GGRLRLGKVVLS----------------MNK----------------------------- 126
GGRL + + VL N+
Sbjct: 603 GGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEGLDGKSNHAVSWEVVGKA 662
Query: 127 ---GGLGVGNLQGKNISLLAKWGWWFMNEKSALWRTVVASKYSFSDGDWLPNSGGDKKVK 186
GGLGVG+L+ ++++L AKW W F NE ALW V+ S Y W +
Sbjct: 663 KFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCR 722
Query: 187 GPWRQTANCCETVDKWYKMRLGRGDKIFVWEDHLIGDACLENTFSRLYNVADSKGFKVEL 209
PWR ++ + +G G ++ WED L+ F RL+N++ + +
Sbjct: 723 CPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNISS 782
BLAST of Lcy04g006260 vs. NCBI nr
Match:
BBN67784.1 (VIRB2-interacting protein 2 [Prunus dulcis])
HSP 1 Score: 132.1 bits (331), Expect = 5.5e-27
Identity = 78/252 (30.95%), Postives = 110/252 (43.65%), Query Frame = 0
Query: 7 IDEKEVSRMASRWGYDSGTWPLSYLGVPLGGNPRCEAFWAPMEEKVRTGLTKWKSFVCSG 66
+D+ V+ MA WG D G WP+ YLG+PLGGNPR FW P+ EKV L KWK S
Sbjct: 1193 LDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSK 1252
Query: 67 GGRLRLGKVVLS----------------MNK----------------------------- 126
GGRL + + VL N+
Sbjct: 1253 GGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEGLDGKSNHAVSWEVVGKA 1312
Query: 127 ---GGLGVGNLQGKNISLLAKWGWWFMNEKSALWRTVVASKYSFSDGDWLPNSGGDKKVK 186
GGLGVG+L+ ++++L AKW W F NE ALW V+ S Y W +
Sbjct: 1313 KFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCR 1372
Query: 187 GPWRQTANCCETVDKWYKMRLGRGDKIFVWEDHLIGDACLENTFSRLYNVADSKGFKVEL 209
PWR ++ + +G G ++ WED L+ F RL+N++ + +
Sbjct: 1373 CPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNISS 1432
BLAST of Lcy04g006260 vs. NCBI nr
Match:
BBG98819.1 (VIRB2-interacting protein 2 [Prunus dulcis] >BBH09158.1 VIRB2-interacting protein 2 [Prunus dulcis])
HSP 1 Score: 132.1 bits (331), Expect = 5.5e-27
Identity = 78/252 (30.95%), Postives = 110/252 (43.65%), Query Frame = 0
Query: 7 IDEKEVSRMASRWGYDSGTWPLSYLGVPLGGNPRCEAFWAPMEEKVRTGLTKWKSFVCSG 66
+D+ V+ MA WG D G WP+ YLG+PLGGNPR FW P+ EKV L KWK S
Sbjct: 419 LDDGMVNEMAGAWGCDVGVWPMLYLGLPLGGNPRAIKFWDPVVEKVENRLQKWKRACLSK 478
Query: 67 GGRLRLGKVVLS----------------MNK----------------------------- 126
GGRL + + VL N+
Sbjct: 479 GGRLTMIQAVLCSIPIYYMSLFRIPIGVANRIEKLMRDFLWEGLDGKSNHAVSWEVVGKA 538
Query: 127 ---GGLGVGNLQGKNISLLAKWGWWFMNEKSALWRTVVASKYSFSDGDWLPNSGGDKKVK 186
GGLGVG+L+ ++++L AKW W F NE ALW V+ S Y W +
Sbjct: 539 KFCGGLGVGSLRARSVALRAKWLWRFPNEPHALWHKVIRSIYGMDTNGWDAKPATRGSCR 598
Query: 187 GPWRQTANCCETVDKWYKMRLGRGDKIFVWEDHLIGDACLENTFSRLYNVADSKGFKVEL 209
PWR ++ + +G G ++ WED L+ F RL+N++ + +
Sbjct: 599 CPWRDISSGYNLFLQGCVFVVGSGVRVRFWEDDWGRGGVLKEVFPRLFNLSRKQNHNISS 658
BLAST of Lcy04g006260 vs. NCBI nr
Match:
BBN69274.1 (TatD related DNase [Prunus dulcis])
HSP 1 Score: 128.6 bits (322), Expect = 6.1e-26
Identity = 73/248 (29.44%), Postives = 112/248 (45.16%), Query Frame = 0
Query: 12 VSRMASRWGYDSGTWPLSYLGVPLGGNPRCEAFWAPMEEKVRTGLTKWKSFVCSGGGRLR 71
++ MA WG + G WP+ YLG+PLGGNPR FW P+ +KV L +WK S GGRL
Sbjct: 491 LNNMAGSWGCEVGCWPMVYLGLPLGGNPRALNFWNPVLDKVEKRLQRWKRACLSKGGRLT 550
Query: 72 LGKVVL-------------------------------------------------SMNKG 131
L + VL S +G
Sbjct: 551 LIQAVLSSIPSYYMSLFKMPIGVTAKVEQLMRNFLWEGVEEGKNCHLVRWVRVTKSKEEG 610
Query: 132 GLGVGNLQGKNISLLAKWGWWFMNEKSALWRTVVASKYSFSDGDWLPNSGGDKKVKGPWR 191
GLG+G+L+ +N +L AKW W F E ++LW ++ SKY W + PWR
Sbjct: 611 GLGIGSLRERNEALRAKWLWRFPLETNSLWHRIIKSKYGLDSNGWDTKQIDKVSCRNPWR 670
Query: 192 QTANCCETVDKWYKMRLGRGDKIFVWEDHLIGDACLENTFSRLYNVADSKGFKVELYWS- 209
+ + + + + +G G+KI WED + + L++ F RLY+++ K + + +
Sbjct: 671 EISKGYISFLQCCRFSVGNGEKIRFWEDFWLKEGILKDLFPRLYSLSRRKNQCIAWFANN 730
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| P0C2F6 | 7.3e-06 | 30.08 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A803P465 | 2.4e-28 | 33.33 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
| A0A4Y1R3V4 | 2.7e-27 | 30.95 | VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_008314 PE=4 SV=1 | [more] |
| A0A5H2XKI7 | 2.7e-27 | 30.95 | VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_184S000200 PE=4 SV... | [more] |
| A0A5E4FED8 | 2.7e-27 | 30.95 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3... | [more] |
| A0A5H2Y6K0 | 2.7e-27 | 30.95 | VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_1151S000200 PE=4 S... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| BBN69746.1 | 5.5e-27 | 30.95 | VIRB2-interacting protein 2 [Prunus dulcis] | [more] |
| VVA25489.1 | 5.5e-27 | 30.95 | Hypothetical predicted protein, partial [Prunus dulcis] | [more] |
| BBN67784.1 | 5.5e-27 | 30.95 | VIRB2-interacting protein 2 [Prunus dulcis] | [more] |
| BBG98819.1 | 5.5e-27 | 30.95 | VIRB2-interacting protein 2 [Prunus dulcis] >BBH09158.1 VIRB2-interacting protei... | [more] |
| BBN69274.1 | 6.1e-26 | 29.44 | TatD related DNase [Prunus dulcis] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
