Lcy04g005350 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g005350
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr04: 33549948 .. 33552394 (+)
RNA-Seq Expression	Lcy04g005350
Synteny	Lcy04g005350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAAGAGGATGGAAAAGGGAAACCAGAATCCAAACCCAGAAACTTCGAAAAATAGCCGCCAGTCGCAGAGGTCACGAGACGATGATAGCATCCAGGGGTCACCGAGACGAACAGGCCGAGGAGCCGAGGCCGAGGAGAATAGGCCGAGGGGCCGAGGCCGAGGAGAGGATGTTGACGCCAAAATTGCCGCCCTTGAGGATAAGGTGAAGGGAATGAATCGGAGTTTGTCCAAAATACTCCAAATCCTGGATAAACCCGACCCTAGCACCAAACTCCATGAGGGGGGCTTGATTAGAGACCCGAAGAAGGGGAAGGAGCCAGTCGAGTACGTGGATGAATCAGAGACAGAATTAAAGGGAAAGAAGACCAACAGCGCACCCAGCAAGGTCAGGGGGCTGAAGATTGCAGAGCGCACAGTACTGAGGAACCCAGAACCAAGTACCAGCCGTAGAACAGACCTGAGAAATCTGATCGAGGAAAAGCGTAGAATGGCCAAAACTGCCGAGTCCGAGGCCAAAGCTGCCGAAGCTAAAGCCAGGGCTGCCGAGGCCGAGGCTAGGTTGGCAGAGGCCGAGGCCAAGAAAGACAATCTCCCTTGGAAGACTGAGCTTCTAAACACACTAAAGGAGCTTGGAAATCCTCAGAGAGACCTGCAGAAGTTAAAGGACTCAGGAGCACAAGACTTGAAAGAACTGATCGACCAAGTTGACCCACCCTTCACGGAAGAAGTCATGAAAGCCGAGGTGCCTTAGAAGTTCAAGGTACCTACATTCACACCGTATGATGGCAAGAAAGACCCTGTGCAGCATCTAAATGCCTACAAAAGTTGGATGGACTTCCACGGCGTCTCCGACGCAATCAGGTGTCGTGCCTTCTTTTTCACTCTGACAGGATCAGCCAAGCATTGTTTTGAAAGGTTGAAGAGAAGATCCATCAGCTCTTTCAAGGAATTAGCCCGAGCATTCCTTGTGCAGATCATGTGAGCTAGAGAACAGCACAAGCCTCACATCAACCTCCTAATAGTTAAACAACAGCCAGGTGAGAGCTTGCGTGATTATATAACACGTTTGATAGCACAATTTATTGTGCCATATTTTAGATGATTTTATCGTTAGTCTTGAGTATTATTTGGCCATTTTTATCTCTATTTGGTTTTGTTTTGTAGGAATCAAGTATTTCAATGGAAATCGACATTTTTGAGCTTTACCGATGATTTAGGAGCTAAAGAATAAGTTCGGGCCAAGAAAATAGAAAAGGAAGATCAATTAAAGGCCTAGCGTTGAGACGCTAGCCATTGGAGCGTCTCAACGCTGGGCGCAAGTTAGCACGCGCGCAAATTCGAGGCAGCGTCGAGACGCTACCTCCACAGCGTCTCGACGCTGCGAACTTTCCAGATTTAATTAGGGCGTACGCGCGACAGCGTCGCGACGCTATGTCCTCAGCGTCTCGACGCTGTCACACAGAATCAGCAGTATTTATATTTTGCGATGCTTTCGTCAAGGGGGAGCTGTTTTGGGGAGAGAAAAACGACTTCTAGAGAGAGAAAACGGACAGAACAAGGCAGAGAGCGAGGGAGCGTGATTTTGGGAGCTTGGATCGAGAGGTTCGTGACGGGAACGTACGGGAATCACGGCCAACGAGTTTAATCTTTCTCCCTTATTTCTTGTATTGATTTGTAGCATGTTTGGGACAAATTTCGCTTGTATTTTAGAGATCATGAGTAGCTAGATTTCGTTTCTTAGGGGCTTGATGTAGCCATTAGTTTGTATGGATTAATTTACGGTTTTTTAGGACGTTTCGTAACGCGGTTTATTTATGCAATTGTTTGATTAATGCTTATAATCTCTTGATCACAGATTGTATGTTGTTGTTTCTGAACTAATCGCTCGGGAGAGGGTAGTTTAGATTAGACTCTCAATTGCATGACTTAGGTAATTCGTTAATCGGGAGATTTGGAATTGCTTGAGAAATCGTCATGAGGATTGTTCTTATTGCTTAGGCTTATTGTTGAAATTAGATAGGGATATCAATTTCTTAATTCGCTTAAAGGATTAATTGCACTCGGGAGAGGCTTTTAATTATTCATAATCCTTGGTTTATAAACTTGTTACGAATTTGTTCTTAATTATTCGTTAAATTAATTCATGCATCTAATAGGTGAAATCAATTCCCTAAGGCCTTTCTCCATTGAGTTTCCACATTTTATTGCTTTGATTAGTTTTTAATTGATTTGCATATTTCTCGCTTATTTTCTCTAAATAAAATTGGGCAAATATACCTTTAATAATTAGGGGAACTAGAAAACCAATCCAGAGGACGACATTCGATTTTAAATCACTATATTATAACTTGGGCCCGTACACTTGCGGTTAGCAATTTGCGTATCAACGTTTTAATGACGAAGCACTACAGGTTGAGGGGTACAGCGAGGGAGCAGCCCTAG

mRNA sequence

ATGAGCAAGAGGATGGAAAAGGGAAACCAGAATCCAAACCCAGAAACTTCGAAAAATAGCCGCCAGTCGCAGAGGTCACGAGACGATGATAGCATCCAGGGGTCACCGAGACGAACAGGCCGAGGAGCCGAGGCCGAGGAGAATAGGCCGAGGGGCCGAGGCCGAGGAGAGGATGTTGACGCCAAAATTGCCGCCCTTGAGGATAAGGTGAAGGGAATGAATCGGAGTTTGTCCAAAATACTCCAAATCCTGGATAAACCCGACCCTAGCACCAAACTCCATGAGGGGGGCTTGATTAGAGACCCGAAGAAGGGGAAGGAGCCAGTCGAGTACGTGGATGAATCAGAGACAGAATTAAAGGGAAAGAAGACCAACAGCGCACCCAGCAAGGTCAGGGGGCTGAAGATTGCAGAGCGCACAGTACTGAGGAACCCAGAACCAAGTACCAGCCGTAGAACAGACCTGAGAAATCTGATCGAGGAAAAGCGTAGAATGGCCAAAACTGCCGAGTCCGAGGCCAAAGCTGCCGAAGCTAAAGCCAGGGCTGCCGAGGCCGAGGCTAGGTTGGCAGAGGCCGAGGCCAAGAAAGACAATCTCCCTTGGAAGACTGAGCTTCTAAACACACTAAAGGAGCTTGGAAATCCTCAGAGAGACCTGCAGAAGTTGAGGGGTACAGCGAGGGAGCAGCCCTAG

Coding sequence (CDS)

ATGAGCAAGAGGATGGAAAAGGGAAACCAGAATCCAAACCCAGAAACTTCGAAAAATAGCCGCCAGTCGCAGAGGTCACGAGACGATGATAGCATCCAGGGGTCACCGAGACGAACAGGCCGAGGAGCCGAGGCCGAGGAGAATAGGCCGAGGGGCCGAGGCCGAGGAGAGGATGTTGACGCCAAAATTGCCGCCCTTGAGGATAAGGTGAAGGGAATGAATCGGAGTTTGTCCAAAATACTCCAAATCCTGGATAAACCCGACCCTAGCACCAAACTCCATGAGGGGGGCTTGATTAGAGACCCGAAGAAGGGGAAGGAGCCAGTCGAGTACGTGGATGAATCAGAGACAGAATTAAAGGGAAAGAAGACCAACAGCGCACCCAGCAAGGTCAGGGGGCTGAAGATTGCAGAGCGCACAGTACTGAGGAACCCAGAACCAAGTACCAGCCGTAGAACAGACCTGAGAAATCTGATCGAGGAAAAGCGTAGAATGGCCAAAACTGCCGAGTCCGAGGCCAAAGCTGCCGAAGCTAAAGCCAGGGCTGCCGAGGCCGAGGCTAGGTTGGCAGAGGCCGAGGCCAAGAAAGACAATCTCCCTTGGAAGACTGAGCTTCTAAACACACTAAAGGAGCTTGGAAATCCTCAGAGAGACCTGCAGAAGTTGAGGGGTACAGCGAGGGAGCAGCCCTAG

Protein sequence

MSKRMEKGNQNPNPETSKNSRQSQRSRDDDSIQGSPRRTGRGAEAEENRPRGRGRGEDVDAKIAALEDKVKGMNRSLSKILQILDKPDPSTKLHEGGLIRDPKKGKEPVEYVDESETELKGKKTNSAPSKVRGLKIAERTVLRNPEPSTSRRTDLRNLIEEKRRMAKTAESEAKAAEAKARAAEAEARLAEAEAKKDNLPWKTELLNTLKELGNPQRDLQKLRGTAREQP

Homology

The following BLAST results are available for this feature:

BLAST of Lcy04g005350 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy04g005350 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy04g005350 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy04g005350 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 152..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g005350.1	Lcy04g005350.1	mRNA