Lcy04g004400 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAAGCTTTCTTCTTCCTACATCGCCATCATTGTTCTTATCTTTGCAGGTTCTCTTCTACAAATTATATGTTATTATTATGAGTTGTAGAAAAATATATTCAACATGTGATATTTCCATGTATGATTTCAAGTGTTTGATGTCGCTACATGGCTCGGTTAATTGATATCAATATTGATTCATATGGTTGAGTTAAATCTCCCGAAACATCTTTCGATTGACTAAATGTTAATAGTTTTCTTATGCCCATTTGAAGAAAAGTATGTCATGTAGAAAACTATATCAATGTTAAAAATATCTTATACATATCGATTAATAATATTTTTATGTTTATTGTTGTATAGTTGCAACGCTTTTGGTGCCTCAACGTGCCTCAGCTGTTCAAAGATGTCAAGAAAGATTGTACAGTAGTGGATGCACACTTAGTGACTGTGGGGAGAAATGTTGGGTGAAGCACCATGATGCCTCACATGAGTGTGTTCCTACTAATCCTGATCAGACTATTTATGCTTGTTATTGTTTCTTTGATTGCGGTCAAAATTGA ATGGCAAAGCTTTCTTCTTCCTACATCGCCATCATTGTTCTTATCTTTGCAGTTGCAACGCTTTTGGTGCCTCAACGTGCCTCAGCTGTTCAAAGATGTCAAGAAAGATTGTACAGTAGTGGATGCACACTTAGTGACTGTGGGGAGAAATGTTGGGTGAAGCACCATGATGCCTCACATGAGTGTGTTCCTACTAATCCTGATCAGACTATTTATGCTTGTTATTGTTTCTTTGATTGCGGTCAAAATTGA ATGGCAAAGCTTTCTTCTTCCTACATCGCCATCATTGTTCTTATCTTTGCAGTTGCAACGCTTTTGGTGCCTCAACGTGCCTCAGCTGTTCAAAGATGTCAAGAAAGATTGTACAGTAGTGGATGCACACTTAGTGACTGTGGGGAGAAATGTTGGGTGAAGCACCATGATGCCTCACATGAGTGTGTTCCTACTAATCCTGATCAGACTATTTATGCTTGTTATTGTTTCTTTGATTGCGGTCAAAATTGA MAKLSSSYIAIIVLIFAVATLLVPQRASAVQRCQERLYSSGCTLSDCGEKCWVKHHDASHECVPTNPDQTIYACYCFFDCGQN Homology
BLAST of Lcy04g004400 vs. ExPASy TrEMBL
Match: A0A5A7THQ7 (S locus-related glycoprotein 1 binding pollen coat OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00450 PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 8.1e-28 Identity = 57/83 (68.67%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of Lcy04g004400 vs. ExPASy TrEMBL
Match: A0A0A0L2R3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G576870 PE=3 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 7.1e-24 Identity = 52/78 (66.67%), Postives = 60/78 (76.92%), Query Frame = 0
BLAST of Lcy04g004400 vs. ExPASy TrEMBL
Match: A0A0A0LVZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172580 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 9.3e-24 Identity = 54/81 (66.67%), Postives = 66/81 (81.48%), Query Frame = 0
BLAST of Lcy04g004400 vs. ExPASy TrEMBL
Match: A0A0A0KYP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507400 PE=3 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 5.5e-16 Identity = 43/83 (51.81%), Postives = 60/83 (72.29%), Query Frame = 0
BLAST of Lcy04g004400 vs. ExPASy TrEMBL
Match: A0A6J5VH03 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS44688 PE=3 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.5e-13 Identity = 39/58 (67.24%), Postives = 44/58 (75.86%), Query Frame = 0
BLAST of Lcy04g004400 vs. NCBI nr
Match: KAA0042348.1 (S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa] >TYK15471.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]) HSP 1 Score: 132.5 bits (332), Expect = 1.7e-27 Identity = 57/83 (68.67%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of Lcy04g004400 vs. NCBI nr
Match: KGN64987.1 (hypothetical protein Csa_022748 [Cucumis sativus]) HSP 1 Score: 119.0 bits (297), Expect = 1.9e-23 Identity = 54/81 (66.67%), Postives = 66/81 (81.48%), Query Frame = 0
BLAST of Lcy04g004400 vs. NCBI nr
Match: KAE8649772.1 (hypothetical protein Csa_012405, partial [Cucumis sativus]) HSP 1 Score: 110.2 bits (274), Expect = 8.9e-21 Identity = 44/63 (69.84%), Postives = 51/63 (80.95%), Query Frame = 0
BLAST of Lcy04g004400 vs. NCBI nr
Match: CAB4286917.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 85.1 bits (209), Expect = 3.1e-13 Identity = 39/58 (67.24%), Postives = 44/58 (75.86%), Query Frame = 0
BLAST of Lcy04g004400 vs. NCBI nr
Match: BBH07492.1 (hypothetical protein Prudu_019451 [Prunus dulcis]) HSP 1 Score: 84.3 bits (207), Expect = 5.3e-13 Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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