Lcy04g004370 (gene) Sponge gourd (P93075) v1

Overview
NameLcy04g004370
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCysteine proteinase inhibitor 5-like
LocationChr04: 28928276 .. 28928815 (-)
RNA-Seq ExpressionLcy04g004370
SyntenyLcy04g004370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGCCAGCATTATAGTGTTTTCTTAACATCAAACTACCAAAAAAAAGTTAGGATGAGTTTTTTAGAACCAGCGTTAGGTTATAGGATATTCAATTTTGGAGATGAACGTACCATGTACTATGTTAAGCTGCCTGTAGAAGTGACGGATCCATATGTGCAAGATATCGGAAAGTTTTCAGTGAGCAAGTTTACAAGAGAAGAGAGGCTAGGAGCAACAACGTTGACGTTCATTCGTGTGGTGAGCGGTGAGAATCAATTAGAAGAGGAAGGAAGAAGATACAAGCTTGTGGTGGAGGTAGAGCCAACATCAGCTCGATCTGCCCCTGAATTCTATGTGGCTCCTGTTCTAGATCTTAAAAAACCTATTAATTCTTGGAAACTCTTGTCTTTTGAACGAACCACCCAGCCCTCTCACCTTCTACTCCTCAACTTCAATGTCTAATTTCTCTACTTTAGATGATGCTCATATTGCATTATCTTTATCTATCAATGCTAATATCTTAATAAAATAACGACTATCTATGTTTAATGTTAGGTTAA

mRNA sequence

GAGCCAGCATTATAGTGTTTTCTTAACATCAAACTACCAAAAAAAAGTTAGGATGAGTTTTTTAGAACCAGCGTTAGGTTATAGGATATTCAATTTTGGAGATGAACGTACCATGTACTATGTTAAGCTGCCTGTAGAAGTGACGGATCCATATGTGCAAGATATCGGAAAGTTTTCAGTGAGCAAGTTTACAAGAGAAGAGAGGCTAGGAGCAACAACGTTGACGTTCATTCGTGTGGTGAGCGGTGAGAATCAATTAGAAGAGGAAGGAAGAAGATACAAGCTTGTGGTGGAGGTAGAGCCAACATCAGCTCGATCTGCCCCTGAATTCTATGTGGCTCCTGTTCTAGATCTTAAAAAACCTATTAATTCTTGGAAACTCTTGTCTTTTGAACGAACCACCCAGCCCTCTCACCTTCTACTCCTCAACTTCAATGTCTAATTTCTCTACTTTAGATGATGCTCATATTGCATTATCTTTATCTATCAATGCTAATATCTTAATAAAATAACGACTATCTATGTTTAATGTTAGGTTAA

Coding sequence (CDS)

ATGAGTTTTTTAGAACCAGCGTTAGGTTATAGGATATTCAATTTTGGAGATGAACGTACCATGTACTATGTTAAGCTGCCTGTAGAAGTGACGGATCCATATGTGCAAGATATCGGAAAGTTTTCAGTGAGCAAGTTTACAAGAGAAGAGAGGCTAGGAGCAACAACGTTGACGTTCATTCGTGTGGTGAGCGGTGAGAATCAATTAGAAGAGGAAGGAAGAAGATACAAGCTTGTGGTGGAGGTAGAGCCAACATCAGCTCGATCTGCCCCTGAATTCTATGTGGCTCCTGTTCTAGATCTTAAAAAACCTATTAATTCTTGGAAACTCTTGTCTTTTGAACGAACCACCCAGCCCTCTCACCTTCTACTCCTCAACTTCAATGTCTAA

Protein sequence

MSFLEPALGYRIFNFGDERTMYYVKLPVEVTDPYVQDIGKFSVSKFTREERLGATTLTFIRVVSGENQLEEEGRRYKLVVEVEPTSARSAPEFYVAPVLDLKKPINSWKLLSFERTTQPSHLLLLNFNV
Homology
BLAST of Lcy04g004370 vs. ExPASy Swiss-Prot
Match: Q10Q47 (Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0210100 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05
Identity = 31/88 (35.23%), Postives = 51/88 (57.95%), Query Frame = 0

Query: 27  PVEVTDPYVQDIGKFSVSKFTREERLGATTLTFIRVVSGENQLEEEGRRYKLVVEVEPTS 86
           PV++ DP+VQ++G+++V++   +  + A  LTF RV  GE Q+   G  Y+L +E   + 
Sbjct: 32  PVDINDPHVQELGRWAVAE--EDRGVAAGGLTFERVTDGEKQV-VAGVNYRLTLEASSSG 91

Query: 87  ARSAPEFYVAPVLDLKKPINSWKLLSFE 115
           A+     Y A V +     N+ KL+SFE
Sbjct: 92  AKDGR--YEAVVYEQDPRSNARKLVSFE 114

BLAST of Lcy04g004370 vs. ExPASy TrEMBL
Match: A0A5A7UB42 (Cysteine proteinase inhibitor 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold48614G00010 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.6e-14
Identity = 48/99 (48.48%), Postives = 63/99 (63.64%), Query Frame = 0

Query: 29  EVTDPYVQDIGKFSVSKFTREERLGATTLTFIRVVSGENQLEEEGRRYKLVVEVEPTSAR 88
           +  DPY++D+G+FSV+KFTR + +     TFIRVVS E  +  EG  Y++VVE+   +  
Sbjct: 28  DTKDPYIEDMGRFSVAKFTRNQDI-EEMATFIRVVSSEYLVVNEGTMYRIVVEIRKENVS 87

Query: 89  SAPEFYVAPVLDLKKPINSWKLLSFERTT---QPSHLLL 125
            + E YVA VLD K P NSW LLSFE +T    PS L L
Sbjct: 88  QSRELYVAKVLDHKHPFNSWTLLSFECSTLLALPSSLAL 125

BLAST of Lcy04g004370 vs. ExPASy TrEMBL
Match: A0A6J1GCT2 (uncharacterized protein LOC111453027 OS=Cucurbita moschata OX=3662 GN=LOC111453027 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.2e-07
Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 0

Query: 27  PVEVTDPYVQDIGKFSVSKFTREERLGATTLTFIRVVSGENQLEEEGRRYKLVVEVE--P 86
           PV V D YVQ++G+F+V +      L    +TFI VVSGE+++  EG++Y LVVEV+  P
Sbjct: 25  PVNVHDQYVQELGRFAVMEHV--HGLCGVGMTFICVVSGESKMVCEGKKYSLVVEVKEVP 84

Query: 87  TSARSAP--EFYVAPVLDLKKPINSWKLLSFE 115
               + P  + YVA VLD K+   SW+LL+F+
Sbjct: 85  VLPHACPAIKLYVADVLD-KQCAKSWELLAFK 113

BLAST of Lcy04g004370 vs. ExPASy TrEMBL
Match: A0A6J1BUK6 (cysteine proteinase inhibitor 5-like OS=Momordica charantia OX=3673 GN=LOC111005500 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.6e-06
Identity = 42/104 (40.38%), Postives = 57/104 (54.81%), Query Frame = 0

Query: 30  VTDPYVQDIGKFSVSKFTREERLGATTLTFIRVVSGENQLEEEGRRYKLVVEVEPTS--- 89
           + DPYVQ++G+F+V +   +      ++ FI VVSGE QL   G+ Y+LVVEV  T    
Sbjct: 29  IKDPYVQEMGRFAVMEQHPKPSELIASMEFIGVVSGEIQLVAHGKEYRLVVEVRVTEKII 88

Query: 90  ----ARSAPEFYVAPVLDLKKPINSWKLLSF---ERTTQPSHLL 124
                 S+   YVA VLD K    SWK+LSF   E    P H++
Sbjct: 89  VHGCPVSSIRLYVAVVLD-KPSDKSWKVLSFAPLELPVGPGHVV 131

BLAST of Lcy04g004370 vs. ExPASy TrEMBL
Match: A0A6J1BX23 (cysteine proteinase inhibitor 5-like OS=Momordica charantia OX=3673 GN=LOC111005501 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 6.1e-06
Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 0

Query: 30  VTDPYVQDIGKFSVSKFTREERLGATTLTFIRVVSGENQLEEEGRRYKLVVEVEPTS--- 89
           + DPYVQ++G+F+V +  +   L A ++ F+ VVSGE QL   G+ Y+LVVEV+ T    
Sbjct: 60  IKDPYVQEMGRFAVMEQPKPVGLVA-SMEFVGVVSGEIQLVAAGKEYRLVVEVKVTEKII 119

Query: 90  ----ARSAPEFYVAPVLDLKKPINSWKLLSF 114
                 S+   YVA VLD K    SWK+LSF
Sbjct: 120 VHGCPVSSIRLYVAVVLD-KPSDKSWKVLSF 148

BLAST of Lcy04g004370 vs. NCBI nr
Match: KAA0053163.1 (cysteine proteinase inhibitor 5-like [Cucumis melo var. makuwa] >TYK01666.1 cysteine proteinase inhibitor 5-like [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 7.4e-14
Identity = 48/99 (48.48%), Postives = 63/99 (63.64%), Query Frame = 0

Query: 29  EVTDPYVQDIGKFSVSKFTREERLGATTLTFIRVVSGENQLEEEGRRYKLVVEVEPTSAR 88
           +  DPY++D+G+FSV+KFTR + +     TFIRVVS E  +  EG  Y++VVE+   +  
Sbjct: 28  DTKDPYIEDMGRFSVAKFTRNQDI-EEMATFIRVVSSEYLVVNEGTMYRIVVEIRKENVS 87

Query: 89  SAPEFYVAPVLDLKKPINSWKLLSFERTT---QPSHLLL 125
            + E YVA VLD K P NSW LLSFE +T    PS L L
Sbjct: 88  QSRELYVAKVLDHKHPFNSWTLLSFECSTLLALPSSLAL 125

BLAST of Lcy04g004370 vs. NCBI nr
Match: KAG6603238.1 (Cysteine proteinase inhibitor 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-10
Identity = 42/90 (46.67%), Postives = 59/90 (65.56%), Query Frame = 0

Query: 29  EVTDPYVQDIGKFSVSKFTREERLGATTLTFIRVVSGENQLEEEGRRYKLVVEVEP---- 88
           ++ DPYVQ+IG+F+++KF   +     T TFIRVV+GE    EEG  Y++V+EV+     
Sbjct: 23  DIKDPYVQEIGRFAMTKFIHHQT--GKTWTFIRVVNGETLAVEEGMLYRVVIEVKTDIVV 82

Query: 89  TSARSAPEFYVAPVLDLKKPINSWKLLSFE 115
            S   + E YVA VLD K+P  SW+LL+FE
Sbjct: 83  QSYLGSIELYVAKVLDHKQPRKSWELLAFE 110

BLAST of Lcy04g004370 vs. NCBI nr
Match: XP_023543511.1 (cysteine proteinase inhibitor 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 68.2 bits (165), Expect = 6.1e-08
Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 0

Query: 27  PVEVTDPYVQDIGKFSVSKFTREERLGATTLTFIRVVSGENQLEEEGRRYKLVVEVEPTS 86
           PV V DPYVQ++G+F+V +      L    +TF+RVVSGE+++  EG++Y LVVEV+   
Sbjct: 25  PVNVHDPYVQELGRFAVMEHV--HGLCGVGMTFVRVVSGESKMVCEGKKYSLVVEVKEVL 84

Query: 87  AR----SAPEFYVAPVLDLKKPINSWKLLSFE 115
                  A + YVA VLD K+   SW+LL+F+
Sbjct: 85  VLPHQCPAIKLYVAEVLD-KQCAKSWELLAFK 113

BLAST of Lcy04g004370 vs. NCBI nr
Match: KAG6604292.1 (putative cysteine proteinase inhibitor 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-07
Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 0

Query: 27  PVEVTDPYVQDIGKFSVSKFTREERLGATTLTFIRVVSGENQLEEEGRRYKLVVEVE--P 86
           PV V D YVQ++G+F+V +      L    +TFIRVVSGE+++  EG++Y LVVEV+  P
Sbjct: 25  PVNVHDQYVQELGRFAVMEHV--HGLCGVGMTFIRVVSGESKMVCEGKKYSLVVEVKEVP 84

Query: 87  TSARSAP--EFYVAPVLDLKKPINSWKLLSFE 115
                 P  + YVA VLD K+   SW+LL+F+
Sbjct: 85  VLPHLCPAIKLYVADVLD-KQCAKSWELLAFK 113

BLAST of Lcy04g004370 vs. NCBI nr
Match: XP_022949716.1 (uncharacterized protein LOC111453027 [Cucurbita moschata])

HSP 1 Score: 64.7 bits (156), Expect = 6.7e-07
Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 0

Query: 27  PVEVTDPYVQDIGKFSVSKFTREERLGATTLTFIRVVSGENQLEEEGRRYKLVVEVE--P 86
           PV V D YVQ++G+F+V +      L    +TFI VVSGE+++  EG++Y LVVEV+  P
Sbjct: 25  PVNVHDQYVQELGRFAVMEHV--HGLCGVGMTFICVVSGESKMVCEGKKYSLVVEVKEVP 84

Query: 87  TSARSAP--EFYVAPVLDLKKPINSWKLLSFE 115
               + P  + YVA VLD K+   SW+LL+F+
Sbjct: 85  VLPHACPAIKLYVADVLD-KQCAKSWELLAFK 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q10Q472.2e-0535.23Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica OX=3994... [more]
Match NameE-valueIdentityDescription
A0A5A7UB423.6e-1448.48Cysteine proteinase inhibitor 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A6J1GCT23.2e-0744.57uncharacterized protein LOC111453027 OS=Cucurbita moschata OX=3662 GN=LOC1114530... [more]
A0A6J1BUK63.6e-0640.38cysteine proteinase inhibitor 5-like OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1BX236.1e-0643.96cysteine proteinase inhibitor 5-like OS=Momordica charantia OX=3673 GN=LOC111005... [more]
Match NameE-valueIdentityDescription
KAA0053163.17.4e-1448.48cysteine proteinase inhibitor 5-like [Cucumis melo var. makuwa] >TYK01666.1 cyst... [more]
KAG6603238.11.3e-1046.67Cysteine proteinase inhibitor 6, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023543511.16.1e-0844.57cysteine proteinase inhibitor 5-like [Cucurbita pepo subsp. pepo][more]
KAG6604292.11.8e-0745.65putative cysteine proteinase inhibitor 7, partial [Cucurbita argyrosperma subsp.... [more]
XP_022949716.16.7e-0744.57uncharacterized protein LOC111453027 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000010Cystatin domainPFAMPF16845SQAPIcoord: 29..115
e-value: 2.4E-8
score: 34.2
NoneNo IPR availableGENE3D3.10.450.10coord: 20..122
e-value: 5.9E-13
score: 50.7
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 31..117

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy04g004370.1Lcy04g004370.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity